Mercurial > repos > fubar > fastqc_320

annotate FastQC/test-data/fastqc_data.txt @ 13:c3ac02711af2 draft default tip

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author fubar
date Mon, 03 Jun 2013 23:59:16 -0400
parents 42251cbdeeac
children
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42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
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1 ##FastQC 0.9.1
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2 >>Basic Statistics pass
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3 #Measure Value
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4 Filename 1000gsample.fastq
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5 File type Conventional base calls
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6 Encoding Sanger / Illumina 1.9
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7 Total Sequences 5000
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8 Sequence length 54
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9 %GC 43
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10 >>END_MODULE
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11 >>Per base sequence quality warn
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12 #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile
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13 1 28.9946 31.0 27.0 33.0 22.0 34.0
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14 2 28.486 30.0 26.0 32.0 21.0 33.0
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15 3 28.5272 30.0 26.0 32.0 21.0 34.0
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16 4 28.6252 30.0 26.0 32.0 22.0 33.0
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17 5 28.4804 30.0 26.0 32.0 21.0 33.0
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18 6 28.5128 30.0 26.0 32.0 22.0 33.0
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19 7 28.4102 30.0 26.0 32.0 21.0 33.0
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20 8 28.4674 30.0 26.0 32.0 22.0 33.0
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21 9 28.182 30.0 26.0 32.0 21.0 33.0
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22 10 28.0908 30.0 26.0 32.0 21.0 33.0
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23 11 28.1876 30.0 26.0 32.0 21.0 33.0
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24 12 28.1742 30.0 26.0 32.0 21.0 33.0
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25 13 27.923 30.0 25.0 32.0 20.0 33.0
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26 14 27.8984 29.0 25.0 32.0 21.0 33.0
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27 15 27.6112 29.0 25.0 32.0 20.0 33.0
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28 16 27.6638 29.0 25.0 32.0 20.0 33.0
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29 17 27.5734 29.0 25.0 32.0 20.0 33.0
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30 18 27.6348 29.0 25.0 32.0 20.0 33.0
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31 19 27.6526 29.0 25.0 32.0 20.0 33.0
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32 20 27.2716 29.0 24.0 32.0 19.0 33.0
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33 21 27.2642 29.0 25.0 31.0 19.0 33.0
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34 22 26.881 28.0 24.0 31.0 19.0 33.0
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35 23 26.8124 28.0 24.0 31.0 19.0 33.0
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36 24 26.8204 28.0 24.0 31.0 19.0 33.0
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37 25 26.6606 28.0 24.0 31.0 18.0 33.0
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38 26 26.3806 28.0 23.0 31.0 18.0 33.0
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39 27 25.947 28.0 23.0 31.0 17.0 33.0
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40 28 25.7446 27.0 22.0 31.0 16.0 33.0
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41 29 25.6856 27.0 22.0 31.0 16.0 33.0
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42 30 25.5228 27.0 22.0 31.0 16.0 33.0
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43 31 25.354 27.0 22.0 30.0 16.0 32.0
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44 32 25.1656 27.0 22.0 30.0 16.0 32.0
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45 33 25.0164 26.0 21.0 30.0 15.0 32.0
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46 34 24.75 26.0 21.0 30.0 15.0 32.0
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47 35 24.3926 26.0 21.0 30.0 15.0 32.0
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48 36 24.1122 25.0 20.0 30.0 14.0 32.0
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49 37 23.8612 25.0 20.0 29.0 13.0 32.0
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50 38 23.7544 25.0 20.0 29.0 13.0 32.0
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51 39 23.485 25.0 19.0 29.0 13.0 32.0
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52 40 23.1984 24.0 19.0 29.0 13.0 32.0
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53 41 23.0976 24.0 19.0 29.0 13.0 32.0
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54 42 22.9212 24.0 19.0 28.0 13.0 31.0
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55 43 22.5172 24.0 18.0 28.0 12.0 31.0
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56 44 22.3234 23.0 18.0 28.0 12.0 31.0
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57 45 22.1372 23.0 18.0 28.0 11.0 31.0
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58 46 22.2166 23.0 18.0 28.0 11.0 31.0
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59 47 22.075 23.0 18.0 28.0 11.0 31.0
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60 48 21.4592 22.0 17.0 27.0 11.0 31.0
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61 49 21.0954 22.0 16.0 27.0 10.0 30.0
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62 50 20.9356 22.0 16.0 27.0 10.0 30.0
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63 51 20.6152 21.0 15.0 27.0 9.0 30.0
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64 52 20.6588 21.0 16.0 27.0 9.0 30.0
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65 53 19.5852 20.0 14.0 25.0 9.0 29.0
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66 54 19.9424 21.0 14.0 26.0 7.0 30.0
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67 >>END_MODULE
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68 >>Per sequence quality scores warn
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69 #Quality Count
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70 8 4.0
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71 9 4.0
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72 10 2.0
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73 11 2.0
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74 12 4.0
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75 13 6.0
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76 14 4.0
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77 15 11.0
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78 16 20.0
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79 17 50.0
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80 18 98.0
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81 19 149.0
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82 20 210.0
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83 21 275.0
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84 22 367.0
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85 23 425.0
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86 24 518.0
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87 25 540.0
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88 26 539.0
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89 27 532.0
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90 28 468.0
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91 29 360.0
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92 30 234.0
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93 31 122.0
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94 32 51.0
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95 33 5.0
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96 >>END_MODULE
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97 >>Per base sequence content pass
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98 #Base G A T C
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99 1 1075 1632 1296 997
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100 2 1202 1586 1327 885
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101 3 1079 1443 1471 1007
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102 4 1079 1414 1445 1062
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103 5 1058 1486 1416 1040
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104 6 1119 1462 1286 1133
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105 7 1067 1516 1412 1005
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106 8 1079 1453 1397 1071
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107 9 1015 1424 1429 1132
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108 10 1060 1542 1328 1070
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109 11 1057 1432 1364 1147
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110 12 1066 1444 1450 1040
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111 13 1018 1461 1447 1074
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112 14 1001 1460 1461 1078
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113 15 1010 1461 1419 1110
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114 16 1017 1469 1465 1049
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115 17 1030 1457 1425 1088
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116 18 1030 1396 1470 1104
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117 19 1083 1423 1429 1065
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118 20 1000 1462 1448 1090
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119 21 1086 1425 1409 1080
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120 22 1026 1544 1365 1065
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125 27 1067 1426 1438 1068
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126 28 967 1527 1373 1133
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127 29 1045 1456 1452 1046
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128 30 1055 1470 1372 1103
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129 31 1042 1402 1433 1123
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131 33 1104 1431 1363 1101
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140 42 1114 1401 1385 1097
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141 43 1062 1421 1391 1125
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142 44 1070 1449 1377 1103
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143 45 1093 1464 1337 1106
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144 46 1063 1377 1387 1173
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145 47 1081 1413 1402 1102
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146 48 1064 1422 1320 1194
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147 49 1052 1452 1359 1136
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148 50 1091 1407 1340 1160
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149 51 1051 1386 1400 1161
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150 52 1091 1507 1297 1104
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151 53 1058 1416 1402 1123
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152 54 1072 1345 1339 1221
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153 >>END_MODULE
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154 >>Per base GC content pass
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155 #Base %GC
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156 1 41.44
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157 2 41.74
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158 3 41.72
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159 4 42.82
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160 5 41.959999999999994
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161 6 45.04
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162 7 41.44
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163 8 43.0
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164 9 42.94
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165 10 42.6
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166 11 44.080000000000005
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167 12 42.120000000000005
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168 13 41.839999999999996
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
169 14 41.58
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
170 15 42.4
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
171 16 41.32
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
172 17 42.36
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
173 18 42.68
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
174 19 42.96
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
175 20 41.8
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
176 21 43.32
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
177 22 41.82
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
178 23 41.38
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
179 24 43.8
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
180 25 41.78
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
181 26 43.47739095638256
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
182 27 42.70854170834167
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
183 28 42.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
184 29 41.82836567313463
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
185 30 43.16
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
186 31 43.3
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
187 32 42.87715086034414
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
188 33 44.10882176435287
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
189 34 43.44868973794759
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
190 35 42.34846969393879
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
191 36 42.528505701140226
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
192 37 42.03681472589035
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
193 38 42.90858171634327
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
194 39 44.697879151660665
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
195 40 43.68
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
196 41 44.266559935961574
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
197 42 44.24654792875725
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
198 43 43.74874974994999
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
199 44 43.468693738747746
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
200 45 43.980000000000004
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
201 46 44.72
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
202 47 43.677470988395356
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
203 48 45.16
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
204 49 43.76875375075015
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
205 50 45.038015206082434
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
206 51 44.25770308123249
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
207 52 43.908781756351274
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
208 53 43.628725745149026
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
209 54 46.071930882057465
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
210 >>END_MODULE
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
211 >>Per sequence GC content warn
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
212 #GC Content Count
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
213 0 3.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
214 1 5.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
215 2 7.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
216 3 7.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
217 4 7.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
218 5 5.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
219 6 2.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
220 7 1.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
221 8 1.5
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
222 9 2.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
223 10 1.5
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
224 11 1.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
225 12 2.5
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
226 13 4.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
227 14 4.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
228 15 4.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
229 16 5.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
230 17 6.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
231 18 11.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
232 19 19.5
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
233 20 23.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
234 21 37.5
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
235 22 52.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
236 23 61.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
237 24 70.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
238 25 79.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
239 26 88.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
240 27 117.5
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
241 28 147.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
242 29 159.5
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
243 30 172.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
244 31 203.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
245 32 243.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
246 33 252.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
247 34 290.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
248 35 328.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
249 36 330.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
250 37 332.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
251 38 332.5
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
252 39 333.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
253 40 342.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
254 41 351.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
255 42 343.5
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
256 43 336.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
257 44 318.5
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
258 45 279.5
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
259 46 258.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
260 47 254.5
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
261 48 251.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
262 49 234.5
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
263 50 218.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
264 51 209.5
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
265 52 201.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
266 53 198.5
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
267 54 196.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
268 55 177.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
269 56 162.5
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
270 57 167.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
271 58 147.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
272 59 127.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
273 60 106.5
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
274 61 86.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
275 62 85.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
276 63 84.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
277 64 61.5
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
278 65 39.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
279 66 42.5
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
280 67 46.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
281 68 34.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
282 69 17.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
283 70 12.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
284 71 14.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
285 72 16.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
286 73 12.5
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
287 74 9.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
288 75 6.5
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
289 76 4.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
290 77 4.5
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
291 78 5.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
292 79 5.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
293 80 5.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
294 81 3.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
295 82 1.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
296 83 1.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
297 84 1.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
298 85 1.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
299 86 1.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
300 87 1.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
301 88 1.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
302 89 1.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
303 90 2.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
304 91 3.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
305 92 2.5
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
306 93 2.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
307 94 2.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
308 95 3.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
309 96 4.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
310 97 5.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
311 98 6.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
312 99 3.5
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
313 100 1.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
314 >>END_MODULE
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
315 >>Per base N content pass
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
316 #Base N-Count
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
317 1 0.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
318 2 0.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
319 3 0.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
320 4 0.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
321 5 0.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
322 6 0.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
323 7 0.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
324 8 0.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
325 9 0.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
326 10 0.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
327 11 0.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
328 12 0.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
329 13 0.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
330 14 0.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
331 15 0.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
332 16 0.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
333 17 0.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
334 18 0.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
335 19 0.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
336 20 0.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
337 21 0.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
338 22 0.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
339 23 0.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
340 24 0.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
341 25 0.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
342 26 0.04
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
343 27 0.02
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
344 28 0.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
345 29 0.02
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
346 30 0.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
347 31 0.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
348 32 0.04
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
349 33 0.02
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
350 34 0.02
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
351 35 0.02
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
352 36 0.02
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
353 37 0.04
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
354 38 0.02
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
355 39 0.04
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
356 40 0.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
357 41 0.06
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
358 42 0.06
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
359 43 0.02
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
360 44 0.02
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
361 45 0.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
362 46 0.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
363 47 0.04
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
364 48 0.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
365 49 0.02
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
366 50 0.04
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
367 51 0.04
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
368 52 0.02
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
369 53 0.02
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
370 54 0.45999999999999996
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
371 >>END_MODULE
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
372 >>Sequence Length Distribution pass
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
373 #Length Count
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
374 54 5000.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
375 >>END_MODULE
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
376 >>Sequence Duplication Levels pass
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
377 #Total Duplicate Percentage 0.66
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
378 #Duplication Level Relative count
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
379 1 100.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
380 2 0.08053150795248641
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
381 3 0.040265753976243206
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
382 4 0.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
383 5 0.020132876988121603
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
384 6 0.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
385 7 0.040265753976243206
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
386 8 0.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
387 9 0.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
388 10++ 0.0
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
389 >>END_MODULE
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
390 >>Overrepresented sequences warn
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
391 #Sequence Count Percentage Possible Source
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
392 CGGAAGAGCGGTTCAGCAGGAATGCCGAGATCGGAAGAGCGGTTCAGCAGGAAT 7 0.13999999999999999 Illumina Paired End PCR Primer 2 (96% over 33bp)
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
393 CGGTTCAGCAGGAATGCCGAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAGAC 7 0.13999999999999999 Illumina Paired End PCR Primer 2 (100% over 35bp)
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
394 >>END_MODULE
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
395 >>Kmer Content fail
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
396 #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
397 CCCCC 1110 9.557241 23.193876 44
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
398 AAAAA 2130 4.1300144 5.698024 7
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
399 CTCCC 530 3.5749238 11.56272 11
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
400 CCTCC 510 3.440021 11.56272 14
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
401 CTGGG 465 3.1575248 8.314476 45
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
402 TGGAA 785 2.929684 6.397646 17
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
403 GGGGG 335 2.9167063 10.660779 6
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
404 GAATG 775 2.8923633 10.053445 20
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
405 CCCAG 450 2.8820548 7.8420706 22
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
406 GTGTG 520 2.7661672 6.513526 23
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
407 TGTGT 660 2.744307 6.109576 27
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
408 GGGAG 425 2.7401958 6.315732 6
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
409 ATGGA 730 2.7244196 6.397646 20
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
410 GCTGG 395 2.6821985 6.651581 16
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
411 GGAGG 410 2.643483 7.894665 7
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
412 GGAAT 700 2.612457 7.3115954 19
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
413 GCAGG 400 2.5732677 14.17877 16
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
414 CCTGG 370 2.5068476 6.6367774 7
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
415 CAGCC 380 2.4337354 6.273657 4
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
416 TGGGA 480 2.419065 7.40506 20
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
417 AATGG 645 2.4071925 5.4836965 18
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
418 GCCTC 355 2.3998654 6.622006 2
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
419 CCCTC 355 2.394524 8.259085 13
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
420 CCAGC 370 2.3696895 6.2736564 14
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
421 GGAAG 495 2.3634295 14.031037 2
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
422 GGCTG 345 2.3426795 9.97737 24
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
423 CAGGA 490 2.3343499 13.99981 17
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
424 CCAGG 360 2.3107867 6.2876506 11
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
425 CTGTG 435 2.3088553 9.09864 44
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
426 GCCTG 340 2.3035896 8.295971 5
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
427 TCCCA 460 2.3028264 6.1297736 9
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
428 CTGCC 340 2.2984629 8.277508 10
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
429 CAGCA 480 2.2816207 10.47649 14
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
430 TTCCT 545 2.256056 7.0961456 1
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
431 CTCCT 415 2.1929073 6.4701333 15
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
432 TCCCC 325 2.1921701 6.6072683 28
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
433 CAGGC 335 2.1503155 6.2876506 14
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
434 CCCCA 335 2.1407545 6.259694 20
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
435 TGGTG 400 2.127821 6.513526 9
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
436 CCCCT 315 2.1247187 6.607268 12
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
437 GGCAG 330 2.122946 6.301676 16
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
438 CTCTG 400 2.1183603 5.187652 16
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
439 TTCCA 540 2.1177678 6.7228537 28
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
440 CAGAG 440 2.0961509 5.833255 28
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
441 CCCTG 310 2.095657 6.622006 24
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
442 AGGGA 435 2.0769534 5.846266 1
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
443 CTCAG 410 2.0570977 6.143447 24
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
444 CTTCC 385 2.034384 6.4701333 17
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
445 AGCAG 425 2.0246909 10.499857 15
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
446 AGGAA 570 2.015381 10.390455 18
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
447 TCCTC 380 2.0079634 5.1761065 1
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
448 TCAGC 400 2.0069244 12.286894 44
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
449 AGAGC 420 2.0008712 10.499858 5
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
450 TCCTG 375 1.9859626 6.4845653 8
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
451 TCTCC 375 1.9815428 5.1761065 8
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
452 CACCC 310 1.9809967 6.259694 9
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
453 TGTGG 370 1.9682345 5.210821 4
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
454 GATGG 390 1.9654902 6.1708827 1
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
455 TGGCT 370 1.9638538 9.098641 45
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
456 TCCCT 370 1.9551222 5.1761065 37
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
457 CAGGG 300 1.9299511 6.3016763 21
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
458 AAGAG 545 1.9269869 9.524584 4
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
459 CAGAA 545 1.9226985 6.0476103 6
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
460 CTGAG 380 1.9108309 6.15715 11
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
461 TCTCT 460 1.9041945 5.068676 8
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
462 GAGGC 295 1.897785 6.301676 22
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
463 CCCAC 295 1.885142 6.259694 4
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
464 CCTGC 275 1.8590509 9.93301 6
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
465 CCTGT 350 1.8535651 6.4845653 6
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
466 TTTCC 445 1.8421009 5.0686755 14
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
467 TGCCT 345 1.8270856 5.187652 12
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
468 CACAC 380 1.8022629 5.8073177 17
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
469 CCTCT 340 1.7965988 7.7641597 2
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
470 TTCCC 340 1.7965986 6.470133 18
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
471 GAAGA 500 1.767878 7.792842 26
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
472 CTGGC 260 1.7615684 6.636777 8
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
473 TTCAG 440 1.7294377 9.6255 12
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
474 CTCTC 325 1.717337 5.1761065 3
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
475 GTGGT 320 1.7022567 5.2108207 24
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
476 GGGTG 250 1.7013805 8.333022 28
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
477 TGCTT 410 1.7010024 5.0799813 4
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
478 CTTTG 405 1.6802584 5.0799813 2
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
479 AGAAG 475 1.6794841 5.1952276 22
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
480 ACTCC 330 1.6520276 6.1297736 10
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
481 CTGCT 310 1.6417291 6.4845653 3
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
482 GCCCC 190 1.6395733 6.339712 37
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
483 AGTGG 325 1.6379085 6.1708827 3
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
484 TGGCA 325 1.6342632 6.1571493 16
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
485 GGCTC 240 1.626063 6.636776 25
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
486 ACACA 460 1.6192161 5.1721287 14
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
487 GCTTT 390 1.6180266 5.0799813 5
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
488 TTCTG 390 1.6180266 5.0799813 3
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
489 TCCTT 390 1.6144258 6.0824113 16
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
490 CCCAA 335 1.588837 5.8073177 10
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
491 GCACA 330 1.5686142 5.8202715 18
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
492 GTTCA 395 1.5525635 7.700401 11
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
493 TCTTC 375 1.5523325 5.068676 4
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
494 AGGCA 325 1.5482932 5.8332543 6
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
495 GGGGA 240 1.5474048 6.3157325 7
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
496 CCTTC 290 1.5323931 6.4701333 17
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
497 ATGCC 305 1.5302798 12.286893 22
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
498 GAAGG 320 1.5278738 5.8462653 8
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
499 GGGAT 295 1.4867171 7.40506 21
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
500 TGTGC 280 1.4861598 5.199224 7
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
501 AACAG 420 1.4817125 5.1836653 10
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
502 TCTTT 455 1.4755235 5.5590916 1
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
503 TTGGC 275 1.4596211 5.199223 15
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
504 GAGAT 385 1.4368514 6.397646 27
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
505 TTTGG 345 1.4345239 6.1095753 3
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
506 GGTTC 270 1.4330826 10.398446 10
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
507 CCTTG 265 1.4034137 5.187652 18
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
508 CCCTT 265 1.4002901 5.176106 14
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
509 CTGTT 335 1.3898433 5.0799813 10
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
510 CCTTT 335 1.3867503 5.068676 8
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
511 GGCAC 215 1.3800533 6.2876506 17
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
512 TTGAA 465 1.3564935 6.4295163 7
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
513 CTTGG 255 1.3534669 5.1992235 18
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
514 GTGTT 325 1.3513632 5.091313 28
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
515 GGCCC 155 1.3405302 6.353853 2
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
516 TGGTT 320 1.330573 5.091313 25
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
517 TTCTT 410 1.3295923 7.941558 4
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
518 GGGGT 195 1.327077 8.333022 45
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
519 AAGGA 375 1.3259085 5.1952276 44
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
520 CAGAT 350 1.3033215 5.471493 10
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
521 CTGGT 245 1.3003898 5.1992235 12
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
522 TGTCC 245 1.2974956 5.187652 21
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
523 GCTCC 190 1.2844352 8.277508 26
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
524 GACAG 265 1.2624544 5.833254 27
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
525 GAGCG 195 1.2544682 12.603353 6
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
526 TTGGG 235 1.2500948 6.5135255 6
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
527 AATGC 335 1.2474647 10.031068 21
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
528 GGCTT 235 1.2473125 5.199223 4
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
529 TTTGC 295 1.223892 5.0799813 9
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
530 GGTGT 230 1.223497 5.21082 27
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
531 GATCG 235 1.181698 6.1571493 45
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
532 AGCTC 225 1.1288949 6.1434464 25
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
533 ACCCT 225 1.1263824 6.129773 10
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
534 CGGAA 235 1.119535 9.333206 1
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
535 CCCAT 220 1.1013516 6.129773 21
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
536 TCTTG 265 1.0994283 5.0799813 21
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
537 ATGCA 295 1.0985136 5.4714913 37
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
538 GCTTG 205 1.0880812 5.199223 2
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
539 AGCGG 165 1.061473 12.603352 7
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
540 AACCA 300 1.0560105 5.1721287 22
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
541 AACCT 280 1.0403365 5.4593143 13
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
542 CCGAG 160 1.0270164 12.575301 25
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
543 TTGCC 190 1.0062209 5.1876516 3
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
544 ACTCA 265 0.9846043 5.4593153 11
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
545 CTCAT 250 0.98044825 5.7624474 4
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
546 GTTCC 185 0.9797416 6.4845653 27
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
547 GAACC 205 0.97444224 5.820272 25
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
548 GGCGG 110 0.9555928 10.637051 44
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
549 GCGGT 130 0.8827489 13.303162 8
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
550 GCGGG 100 0.86872077 6.3822303 45
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
551 TGCCG 125 0.846908 14.93275 23
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
552 AGGCG 120 0.7719804 6.3016763 15
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
553 CGGTT 140 0.74307984 10.398446 9
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
554 GCCGA 115 0.738168 12.575301 24
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
555 CGAGA 130 0.61931723 9.333206 26
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
556 CGGGA 85 0.5468194 6.301676 24
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
557 CACGG 85 0.54560244 6.2876506 37
42251cbdeeac Initial commit of test for FastQC with installation of the java stuff
fubar
parents:
diff changeset
558 >>END_MODULE