# HG changeset patch # User fubar # Date 1370480782 14400 # Node ID d101029906cb869a2f79a63a3a7271a10accee2d # Parent 7e6db50c9d47d59ed8ad5d09aa678625ee49941d new version with complex dependency on fastqc_dist_0_10_1 diff -r 7e6db50c9d47 -r d101029906cb FastQC/tool_dependencies.xml --- a/FastQC/tool_dependencies.xml Tue Jun 04 22:42:51 2013 -0400 +++ b/FastQC/tool_dependencies.xml Wed Jun 05 21:06:22 2013 -0400 @@ -1,24 +1,9 @@ - - $INSTALL_DIR/FastQC/fastqc - - - - - http://www.bioinformatics.babraham.ac.uk/projects/fastqc/fastqc_v0.10.1.zip - - ../FastQC - $INSTALL_DIR/FastQC - - chmod ugo+x $INSTALL_DIR/FastQC/fastqc - - $INSTALL_DIR/FastQC - - - - You need a working unzip command line executable to install this tool and a suitable working Java run time environment - available to all potential execution nodes for this tool to work. - Please see http://www.bioinformatics.babraham.ac.uk/projects/fastqc for all FastQC documentation + + + This is a complex dependency on the FastQC java distribution. It will automagically install the required binary and set up the FastQC tool to use it + Please see http://www.bioinformatics.babraham.ac.uk/projects/fastqc for all FastQC documentation +