# HG changeset patch
# User fubar
# Date 1371095721 14400
# Node ID 0e69aefbbfa4dcda8355e91170364c8aef840512
# Parent  bddbc76bce5dfcba62f1070373f8433385996059
Uploaded

diff -r bddbc76bce5d -r 0e69aefbbfa4 rgedgeR/tool_dependencies.xml
--- a/rgedgeR/tool_dependencies.xml	Wed Jun 12 23:51:30 2013 -0400
+++ b/rgedgeR/tool_dependencies.xml	Wed Jun 12 23:55:21 2013 -0400
@@ -11,7 +11,7 @@
                         <package name="r3" version="3.0.1" />
                     </repository>
                 </action>
-                <action type="shell_command">R CMD BATCH $INSTALL_DIR/installBioC.R </action>
+                <action type="shell_command">R CMD BATCH $REPOSITORY_INSTALL_DIR/installBioC.R </action>
             </actions>
         </install>
         <readme>Installs some basic bioc packages for the edgeR tool