Mercurial > repos > fubar > edger_test
comparison rgedgeR/tool_dependencies.xml @ 3:e22b0320a4ff draft
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author | fubar |
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date | Wed, 12 Jun 2013 03:02:29 -0400 |
parents | 515a5e61874c |
children | dea65c85afb4 |
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2:515a5e61874c | 3:e22b0320a4ff |
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2 <?xml version="1.0"?> | 1 <?xml version="1.0"?> |
3 | |
4 <tool_dependency> | 2 <tool_dependency> |
5 <!-- | |
6 blame Boris - Ross stole it from his old 2.15 one | |
7 --> | |
8 <package name="readline" version="6.2"> | 3 <package name="readline" version="6.2"> |
9 <repository name="package_readline_6_2" owner="boris" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu/" /> | 4 <repository changeset_revision="1301ec7705a8" name="package_readline_6_2" owner="boris" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu/" /> |
10 </package> | 5 </package> |
11 <package name="package_R" version="3.0.1"> | 6 <package name="package_R" version="3.0.1"> |
12 <install version="1.0"> | 7 <install version="1.0"> |
13 <actions> | 8 <actions> |
14 <action type="download_by_url">http://cran.ms.unimelb.edu.au/src/base/R-3/R-3.0.1.tar.gz</action> | 9 <action type="download_by_url">http://cran.ms.unimelb.edu.au/src/base/R-3/R-3.0.1.tar.gz</action> |
15 <action type="set_environment_for_install"> | 10 <action type="set_environment_for_install"> |
16 <repository name="package_readline_6_2" owner="boris" toolshed="http://testtoolshed.g2.bx.psu.edu/"> | 11 <repository changeset_revision="1301ec7705a8" name="package_readline_6_2" owner="boris" toolshed="http://testtoolshed.g2.bx.psu.edu/"> |
17 <package name="readline" version="6.2" /> | 12 <package name="readline" version="6.2" /> |
18 </repository> | 13 </repository> |
19 </action> | 14 </action> |
20 <action type="make_directory">$INSTALL_DIR</action> | 15 <action type="make_directory">$INSTALL_DIR</action> |
21 <action type="shell_command">./configure --with-blas --with-lapack --enable-R-shlib --with-readline=no --with-x=no --prefix=$INSTALL_DIR && make && make install</action> | 16 <action type="shell_command">./configure --with-blas --with-lapack --enable-R-shlib --with-readline=no --with-x=no --prefix=$INSTALL_DIR && make && make install</action> |