Mercurial > repos > fubar > differential_count_models

annotate runme.R @ 110:d7e2a0c0cce9 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author fubar
date Sun, 06 Jul 2014 21:00:54 -0400
parents 71ba9cdc9838
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
92
71ba9cdc9838 Uploaded
fubar
parents:
diff changeset
1 bioclite = "http://bioconductor.org/biocLite.R"
71ba9cdc9838 Uploaded
fubar
parents:
diff changeset
2 install.packages(c("stringr","gplots"),dependencies=T,repos=http://cran.us.r-project.org)
71ba9cdc9838 Uploaded
fubar
parents:
diff changeset
3 source(bioclite)
71ba9cdc9838 Uploaded
fubar
parents:
diff changeset
4 installme=c(edgeR,limma,DESeq,DESeq2)
71ba9cdc9838 Uploaded
fubar
parents:
diff changeset
5 biocLite()
71ba9cdc9838 Uploaded
fubar
parents:
diff changeset
6 biocLite(installme)
71ba9cdc9838 Uploaded
fubar
parents:
diff changeset
7 quit(save="no")