Mercurial > repos > fubar > data_manager_rnasta
comparison data_manager/rnastar_index_builder.py @ 7:5c7efaab6713 draft
Uploaded
| author | fubar |
|---|---|
| date | Fri, 09 Jan 2015 23:34:32 -0500 |
| parents | f9d8dc8c2152 |
| children | 363d6797d366 |
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| 6:f9d8dc8c2152 | 7:5c7efaab6713 |
|---|---|
| 73 break | 73 break |
| 74 sys.stderr.write( chunk ) | 74 sys.stderr.write( chunk ) |
| 75 sys.exit( return_code ) | 75 sys.exit( return_code ) |
| 76 tmp_stderr.close() | 76 tmp_stderr.close() |
| 77 data_table_entry = dict( value=sequence_id, dbkey=dbkey, name=sequence_name, path=fasta_base_name ) | 77 data_table_entry = dict( value=sequence_id, dbkey=dbkey, name=sequence_name, path=fasta_base_name ) |
| 78 data_manager_dict = {} | |
| 78 data_manager_dict = _add_data_table_entry( data_manager_dict, data_table_name, data_table_entry ) | 79 data_manager_dict = _add_data_table_entry( data_manager_dict, data_table_name, data_table_entry ) |
| 79 return data_manager_dict | 80 return data_manager_dict |
| 80 | 81 |
| 81 | 82 |
| 82 def main(): | 83 def main(): |