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view rgclustal/tool_dependencies.xml @ 1:e49657d6921e draft

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author fubar
date Wed, 10 Jul 2013 20:38:37 -0400
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<?xml version="1.0" encoding="UTF-8"?>
<tool_dependency>
    <package name="package_clustalw" version="2.1">
        <install version="1.0"> 
           <actions>
                <action type="make_directory">$INSTALL_DIR</action>
                <action type="download_by_url">http://www.clustal.org/download/current/clustalw-2.1.tar.gz</action>
                <action type="shell_command">./configure --prefix=$INSTALL_DIR &amp;&amp; make &amp;&amp; cp $INSTALL_DIR/src/clustalw $INSTALL_DIR</action>
                <action type="set_environment">
                    <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR</environment_variable>
                </action>
           </actions>
        </install>
        <readme>Installs clustalw from http://www.clustal.org/download/current/clustalw-2.1.tar.gz
       </readme>
    </package>
</tool_dependency>