Mercurial > repos > eschen42 > w4mcorcov

view README @ 0:50a07adddfbd draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/HegemanLab/w4mcorcov_galaxy_wrapper/tree/master commit 52e588e19fe93d83d221710bb75559c5700ba637
author eschen42
date Mon, 09 Oct 2017 15:46:13 -0400
parents
children
line wrap: on
line source

# w4mcorcov_galaxy_wrapper

Planemo-based galaxy-tool-wrapper to wrap a SIMCA® OPLS-DA® S-PLOT® "work-alike" tool.
This tool plots the correlation of each feature with the OPLS-DA projection of multivariate data for two classes of data against the covariance of the same.

The original plot which this tool emulates is described in:
> Wiklund, Susanne and Johansson, Erik and Sjöström, Lina and Mellerowicz, Ewa J. and Edlund, Ulf and Shockcor, John P. and Gottfries, Johan and Moritz, Thomas and Trygg, Johan (2008). Visualization of GC/TOF-MS-Based Metabolomics Data for Identification of Biochemically Interesting Compounds Using OPLS Class Models. In Analytical Chemistry, 80 (1), pp. 115–122. doi:10.1021/ac0713510