Mercurial > repos > eschen42 > mqppep_preproc
changeset 4:8be24b489992 draft
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit bb6c941be50db4c0719efdeaa904d7cb7aa1d182-dirty"
| author | eschen42 |
|---|---|
| date | Mon, 07 Mar 2022 20:43:23 +0000 |
| parents | 305cff3d709e |
| children | b91809a18dbe |
| files | mqppep_preproc.xml repository_dependencies.xml |
| diffstat | 2 files changed, 3 insertions(+), 3 deletions(-) [+] |
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--- a/mqppep_preproc.xml Mon Mar 07 19:25:30 2022 +0000 +++ b/mqppep_preproc.xml Mon Mar 07 20:43:23 2022 +0000 @@ -33,7 +33,7 @@ ( echo '--- localization-filter step:' ) && ( - Rscript '$__tool_directory__/MaxQuantProcessingScript.R' + \$CONDA_PREFIX/bin/Rscript '$__tool_directory__/MaxQuantProcessingScript.R' -i '$phosphoSites' --enriched $enriched --phosphoCol '$phosphocol_script'
--- a/repository_dependencies.xml Mon Mar 07 19:25:30 2022 +0000 +++ b/repository_dependencies.xml Mon Mar 07 20:43:23 2022 +0000 @@ -1,5 +1,5 @@ <?xml version="1.0" ?> <repositories description="Suite for preprocessing and ANOVA of MaxQuant results using LC-MS proteomics data from phosphoproteomic enrichment."> - <repository name="mqppep_preproc" owner="eschen42" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="f47845b5e1b2"/> - <repository name="mqppep_anova" owner="eschen42" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="6ac9cac54ecc"/> + <repository name="mqppep_preproc" owner="eschen42" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="305cff3d709e"/> + <repository name="mqppep_anova" owner="eschen42" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="f9c13bc8e7ad"/> </repositories> \ No newline at end of file