Mercurial > repos > eschen42 > mqppep_preproc

diff run_planemo_test.sh @ 28:2a11f2766542 draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit be6750cb1d7ae18e71b60ae6f2c55e5331105c4f
author eschen42
date Thu, 27 Oct 2022 18:53:40 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/run_planemo_test.sh	Thu Oct 27 18:53:40 2022 +0000
@@ -0,0 +1,8 @@
+#!/bin/env bash
+WHATTOTEST=$1
+
+old_path=$PATH
+new_path=`echo $PATH | sed -e "s^/home/rstudio/bin/tinytex:^^"`
+export PATH=$new_path
+
+planemo test --biocontainers --galaxy_root ~/galaxy/thor/planemo_galaxy/galaxyproject-galaxy ${WHATTOTEST:-.}