diff test-data/test_input_for_preproc.tabular @ 13:28a126da9b28 draft

"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 040e4945da00a279cb60daae799fce9489f99c50"
author eschen42
date Tue, 22 Mar 2022 20:47:10 +0000
parents 2c7e1b167736
children
line wrap: on
line diff
--- a/test-data/test_input_for_preproc.tabular	Tue Mar 15 18:17:19 2022 +0000
+++ b/test-data/test_input_for_preproc.tabular	Tue Mar 22 20:47:10 2022 +0000
@@ -36,3 +36,4 @@
 sp|Q15836|VAMP3_HUMAN;sp|P63027|VAMP2_HUMAN;sp|P23763-2|VAMP1_HUMAN;sp|P23763-3|VAMP1_HUMAN;sp|P23763|VAMP1_HUMAN	44;61;63;63;63	sp|Q15836|VAMP3_HUMAN	sp|Q15836|VAMP3_HUMAN		1	65.4951	2.36E-06	126.19	98.602	65.495																										1	S	MRVNVDKVLERDQKLSELDDRADALQAGASQ	X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X	XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX	DQKLS(1)ELDDR	DQKLS(65.5)ELDDR	5	3	-0.72518	By MS/MS	By MS/MS	By MS/MS	By MS/MS	By matching	By MS/MS	412950000	412950000	0	0	NaN	75542000	44814000	32924000	35016000	11023000	4669900	NaN	NaN	NaN	NaN	NaN	NaN	75542000	0	0	44814000	0	0	32924000	0	0	35016000	0	0	11023000	0	0	4669900	0	0	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN			4443	2836	44	44	4530	5083	37093;37094;37095;37096;37097;37098;37099;37100;37101;37102;37103;37104	34712;34713;34714;34715;34716;34717;34718;34719	37100	34719	QE05102	18436	37093	34712	QE05097	18245	37093	34712	QE05097	18245
 sp|Q15836|VAMP3_HUMAN	11	sp|Q15836|VAMP3_HUMAN	sp|Q15836|VAMP3_HUMAN		0.97018	15.1316	0.000117365	79.652	72.041	79.652																										1	S	_____MSTGPTAATGSNRRLQQTQNQVDEVV	X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X	XXXXXXPPPPPPPPPPPPPXXXXXXXXXXXX	STGPTAAT(0.03)GS(0.97)NRR	S(-66.94)T(-63.48)GPT(-42.47)AAT(-15.13)GS(15.13)NRR	10	2	-0.15791	By matching	By matching	By MS/MS	By matching	By matching	By MS/MS	34280000	34280000	0	0	NaN	3057100	4718800	12052000	5047700	1070900	8333500	NaN	NaN	NaN	NaN	NaN	NaN	3057100	0	0	4718800	0	0	12052000	0	0	5047700	0	0	1070900	0	0	8333500	0	0	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN			4444	2836	11	11	20280	22978	162490;162491;162492;162493;162494;162495	144222;144223	162490	144222	QE05099	7582	162490	144222	QE05099	7582	162490	144222	QE05099	7582
 sp|Q9BV40|VAMP8_HUMAN	55	sp|Q9BV40|VAMP8_HUMAN	sp|Q9BV40|VAMP8_HUMAN		0.959784	13.7778	3.78E-05	91.969	27.98	91.969																										1	S	NLEHLRNKTEDLEATSEHFKTTSQKVARKFW	X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X	XXXXXXXXPPPPPPPPPPPPXXXXXXXXXXX	TEDLEAT(0.04)S(0.96)EHFK	T(-83.18)EDLEAT(-13.78)S(13.78)EHFK	8	2	0.40785	By matching	By matching	By matching			By MS/MS	114520000	114520000	0	0	NaN	20400000	9738500	7862300	0	0	76518000	NaN	NaN	NaN	NaN	NaN	NaN	20400000	0	0	9738500	0	0	7862300	0	0	0	0	0	0	0	0	76518000	0	0	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN			7902	4687	55	55	21013	23827	168874;168875;168876;168877	150433	168874	150433	QE05102	19524	168874	150433	QE05102	19524	168874	150433	QE05102	19524
+sp|P54764-2|EPHA4_HUMAN;sp|P54764|EPHA4_HUMAN	551;602	sp|P54764-2|EPHA4_HUMAN	sp|P54764-2|EPHA4_HUMAN		0.871707	6.48916	4.61E-08	65.374	58.758	65.374																									+	2	Y	KHLNQGVRTYVDPFTYEDPNQAVREFAKEID	X;X;X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;Phospho (STY);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X	XXXXXXXXPPPPPPPPPPPPPPPPXXXXXXX	T(0.499)Y(0.501)VDPFT(0.128)Y(0.872)EDPNQAVR	T(0.85)Y(-0.85)VDPFT(-6.49)Y(6.49)EDPNQAVR	8	3	0.97415	By matching		By MS/MS	By matching	By matching		3679100	0	3679100	0	NaN	725460	0	1651300	655850	646420	0	NaN	NaN	NaN	NaN	NaN	NaN	0	725460	0	0	0	0	0	1651300	0	0	655850	0	0	646420	0	0	0	0	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN			242	260	551	551	972	999	4968;4969;4970;4971	3421	4968	3421	QE04980	9557	4968	3421	QE04980	9557	4968	3421	QE04980	9557