Mercurial > repos > eschen42 > mqppep_preproc

diff MaxQuantProcessingScript.R @ 32:072fe8228dfa draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit f77498b7b7ec81809c005d1caad6f2bcd2523821
author eschen42
date Tue, 14 Feb 2023 15:20:28 +0000
parents 29775869faba
children 872a0f9860ff
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--- a/MaxQuantProcessingScript.R	Fri Dec 09 21:06:08 2022 +0000
+++ b/MaxQuantProcessingScript.R	Tue Feb 14 15:20:28 2023 +0000
@@ -73,7 +73,9 @@
 }
 
 # Generate phosphopeptide and build list when applied
+# nolint start: squash un-actionable cyclomatic_complexity warning
 phosphopeptide_func <- function(df) {
+# nolint end
   # generate peptide sequence and list of phosphopositions
   phosphoprobsequence <-
     strsplit(as.character(df["Phospho (STY) Score diffs"]), "")[[1]]