Mercurial > repos > eschen42 > mqppep_anova

comparison mqppep_anova_script.Rmd @ 14:6679616d0c18 draft

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"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 514e7b9b3a3730a5676821554449d5feb323eb9a"
author eschen42
date Tue, 22 Mar 2022 23:12:18 +0000
parents b41a077af3aa
children 2c5f1a2fe16a
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13:b41a077af3aa 14:6679616d0c18
9 toc: true 9 toc: true
10 params: 10 params:
11 inputFile: "test-data/test_input_for_anova.tabular" 11 inputFile: "test-data/test_input_for_anova.tabular"
12 alphaFile: "test-data/alpha_levels.tabular" 12 alphaFile: "test-data/alpha_levels.tabular"
13 firstDataColumn: "Intensity" 13 firstDataColumn: "Intensity"
14 imputationMethod: !r c("group-median", "median", "mean", "random")[1] 14 imputationMethod: !r c("group-median", "median", "mean", "random")[4]
15 meanPercentile: 1 15 meanPercentile: 1
16 sdPercentile: 1.0 16 sdPercentile: 1.0
17 regexSampleNames: "\\.\\d+[A-Z]$" 17 regexSampleNames: "\\.\\d+[A-Z]$"
18 regexSampleGrouping: "\\d+" 18 regexSampleGrouping: "\\d+"
19 imputedDataFilename: "test-data/imputedDataFilename.txt" 19 imputedDataFilename: "test-data/imputedDataFilename.txt"