Mercurial > repos > edward-kirton > abyss_toolsuite
comparison abyss/abyss_wrapper.sh @ 0:f955d9559654 default tip
Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
| author | edward-kirton |
|---|---|
| date | Tue, 07 Jun 2011 17:21:54 -0400 |
| parents | |
| children |
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| -1:000000000000 | 0:f955d9559654 |
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| 1 #!/bin/bash | |
| 2 | |
| 3 if [ $# -ne 3 ] | |
| 4 then | |
| 5 echo "ERROR: Expected exactly 3 arguments; got: $*" 1>&2 | |
| 6 exit 1 | |
| 7 fi | |
| 8 | |
| 9 CMD=`ABYSS -k$1 $2 -o $3 2>&1` | |
| 10 if [ $? -ne 0 ] | |
| 11 then | |
| 12 { | |
| 13 echo "COMMAND FAILURE: $CMD" 1>&2 | |
| 14 exit $? | |
| 15 } | |
| 16 fi |