# HG changeset patch
# User ecology
# Date 1749823898 0
# Node ID 9e462c4e8367e237b68f1bacc9221be4557c9bcd
# Parent 5040d466761b2be4e244641765fe49c2fc80aa64
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tree/master/tools/ocean_data_view_manager commit 03e7755bd0554044c4ca46c27007ee03a58b8d89
diff -r 5040d466761b -r 9e462c4e8367 tool_odv_history.xml
--- a/tool_odv_history.xml Wed Jun 11 18:23:30 2025 +0000
+++ b/tool_odv_history.xml Fri Jun 13 14:11:38 2025 +0000
@@ -2,7 +2,7 @@
reports user action performed with ODV
1.1
- 0.1
+ 1
easyqcvbgc/easy-qcv_odv-history-manager_tool:@VERSION@
@@ -16,8 +16,14 @@
mkdir -p ./outputs &&
#for $i, $infile in enumerate($input_raw):
- cp '$infile' '/runtime/data-in-raw/${infile.element_identifier}' &&
- #end for
+ #set real_name = $infile.element_identifier
+ #set extension = $real_name.split('.')[-1]
+ #if $extension == 'nc':
+ cp '${infile.file_name}' "/runtime/data-in-raw/${infile.element_identifier}" &&
+ #else
+ cp '${infile.file_name}' "/runtime/data-in-raw/${infile.element_identifier}.nc" &&
+ #end if
+ #end for
#if $input_odv:
#for $i, $infile in enumerate($input_odv):
cp '$infile' '/runtime/data-in-history/${infile.element_identifier}' &&
@@ -43,7 +49,13 @@
#mandatory information
file_name_list_raw :
#for $i, $infile in enumerate($input_raw):
- #set name_raw='${infile.element_identifier}'
+ #set real_name = $infile.element_identifier
+ #set extension = $real_name.split('.')[-1]
+ #if $extension == 'nc':
+ #set name_raw='${infile.element_identifier}'
+ #else:
+ #set name_raw='${infile.element_identifier}.nc'
+ #end if
- ${name_raw}
#end for
#optional
@@ -135,7 +147,7 @@