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comparison aquainfra_ogc_api_processes.xml @ 5:b03358838a4f draft

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planemo upload for repository https://github.com/AquaINFRA/tools-ecology/tree/master commit fa7b5c7a6a7ded46137a970806231239ba8cbb97
author ecology
date Wed, 07 May 2025 17:58:09 +0000
parents c44f0ac56eb4
children 8f9d34c780de
comparison
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4:c44f0ac56eb4 5:b03358838a4f
1 <tool id="aquainfra_ogc_api_processes" name="AquaINFRA OGC API Processes" version="0.5.0" profile="22.05"> 1 <tool id="aquainfra_ogc_api_processes" name="AquaINFRA OGC API Processes" version="0.6.0" profile="22.05">
2 <description/> 2 <description/>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <creator> 6 <creator>
27 <option value="map-shapefile-points">map-shapefile-points: Spatial visualisation of regions and data points</option> 27 <option value="map-shapefile-points">map-shapefile-points: Spatial visualisation of regions and data points</option>
28 <option value="owt-classification">owt-classification: OWT Classification</option> 28 <option value="owt-classification">owt-classification: OWT Classification</option>
29 <option value="tordera-gloria">tordera-gloria: SWAT+, Soil and Water Assessment Tool</option> 29 <option value="tordera-gloria">tordera-gloria: SWAT+, Soil and Water Assessment Tool</option>
30 <option value="tordera-gloria-connection">tordera-gloria-connection: SWAT+ output to MITgcm input connection tool</option> 30 <option value="tordera-gloria-connection">tordera-gloria-connection: SWAT+ output to MITgcm input connection tool</option>
31 <option value="riverload">riverload: Compute River Load</option> 31 <option value="riverload">riverload: Compute River Load</option>
32 <option value="mitgcm-resultplots">mitgcm-resultplots: Catalunya MITgcm Plotting Tool</option>
32 </param> 33 </param>
33 <when value="points-att-polygon"> 34 <when value="points-att-polygon">
34 <param name="input_data" label="Table to be merged with study region" optional="false" help="URL to the input table containing the in-situ data points with coordinates. Can be provided as Excel file or CSV file (comma-separated text file). The coordinates have to be in WGS84 coordinate system. (URL must be stored in a .txt file)" type="data" format="txt"/> 35 <param name="input_data" label="Table to be merged with study region" optional="false" help="URL to the input table containing the in-situ data points with coordinates. Can be provided as Excel file or CSV file (comma-separated text file). The coordinates have to be in WGS84 coordinate system. (URL must be stored in a .txt file)" type="data" format="txt"/>
35 <param name="regions" label="Study region or study subregions" optional="false" help="URL to the study region, or several regions, to classify your input data into groups of interest. Currently it has to be provided as a shapefile. It can be in any coordinate system and will be transformed to WGS84 during this process. (URL must be stored in a .txt file)" type="data" format="txt"/> 36 <param name="regions" label="Study region or study subregions" optional="false" help="URL to the study region, or several regions, to classify your input data into groups of interest. Currently it has to be provided as a shapefile. It can be in any coordinate system and will be transformed to WGS84 during this process. (URL must be stored in a .txt file)" type="data" format="txt"/>
36 <param name="colname_long" label="Column name for longitude" optional="true" help="Only needed for data other than geojson. Name of the column that contains longitude values (in WGS84)." type="text"/> 37 <param name="colname_long" label="Column name for longitude" optional="true" help="Only needed for data other than geojson. Name of the column that contains longitude values (in WGS84)." type="text"/>
143 </when> 144 </when>
144 <when value="riverload"> 145 <when value="riverload">
145 <param name="input_toc_urls" label="Input Total Organic Carbon (TOC)" optional="false" help="URL to in situ Total Organic Carbon (TOC) data (date, value). If the data is divided into parts, please provide several URLs separated by a comma. All URLs need to start with http(s). (URL must be stored in a .txt file)" type="data" format="txt"/> 146 <param name="input_toc_urls" label="Input Total Organic Carbon (TOC)" optional="false" help="URL to in situ Total Organic Carbon (TOC) data (date, value). If the data is divided into parts, please provide several URLs separated by a comma. All URLs need to start with http(s). (URL must be stored in a .txt file)" type="data" format="txt"/>
146 <param name="input_discharge_urls" label="Input discharge" optional="false" help="URL to the daily discharge data (date, value). If the data is divided into parts, please provide several URLs separated by a comma. All URLs need to start with http(s). (URL must be stored in a .txt file)" type="data" format="txt"/> 147 <param name="input_discharge_urls" label="Input discharge" optional="false" help="URL to the daily discharge data (date, value). If the data is divided into parts, please provide several URLs separated by a comma. All URLs need to start with http(s). (URL must be stored in a .txt file)" type="data" format="txt"/>
147 </when> 148 </when>
149 <when value="mitgcm-resultplots">
150 <param name="netcdf_input_file" label="NetCDF input file" optional="false" help="The NetCDF input file that should be plotted. It must comply to some specific properties with respect to variables. (URL must be stored in a .txt file)" type="data" format="txt"/>
151 <param name="variable" label="Variable to be plotted" optional="false" help="The variable that should be plotted. You can choose between 'T', 'S', 'U', 'V', 'Eta' and 'W'." type="select">
152 <option value="T">T</option>
153 <option value="S">S</option>
154 <option value="U">U</option>
155 <option value="V">V</option>
156 <option value="Eta">Eta</option>
157 <option value="W">W</option>
158 </param>
159 <param name="plot_time" label="Hour to be plotted" optional="false" help="The time of day (hourly resolution) that should be plotted. Please specify it in this specific format: '20220703-12:00:00'. We assume that the hour is in the simulation period." type="text"/>
160 <param name="plot_depth" label="Depth to be plotted" optional="false" help="The depth at which should be plotted. The plot will be at the closest vertical level to this depth. Please specify a negative value. We assume the depth is in the range of our depths." type="float"/>
161 <param name="min_var_for_color" label="Minimum value to be considered for color limit" optional="true" help="This is a parameter controlling the color limits to display. Example (for salinity): 35. Leave empty to let the color limits be chosen automatically." type="float"/>
162 <param name="max_var_for_color" label="Maximum value to be considered for color limit" optional="true" help="This is a parameter controlling the color limits to display. Example (for salinity): 38. Leave empty to let the color limits be chosen automatically." type="float"/>
163 </when>
148 </conditional> 164 </conditional>
149 </inputs> 165 </inputs>
150 <outputs> 166 <outputs>
151 <data name="output_data" format="txt" label="$select_process"/> 167 <data name="output_data" format="txt" label="$select_process"/>
152 </outputs> 168 </outputs>