Mercurial > repos > drosofff > package_ged_velvet

comparison tool_dependencies.xml @ 0:126303442158 draft

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planemo upload for repository https://bitbucket.org/drosofff/gedtools/
author drosofff
date Fri, 29 May 2015 12:23:41 -0400
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children f7ba2dcfa9aa
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-1:000000000000 0:126303442158
1 <?xml version="1.0"?>
2 <tool_dependency>
3 <package name="velvet" version="1.2.10_9adf09f7ded7fedaf6b0e5e4edf9f46602e263d3">
4 <install version="1.0">
5 <actions>
6 <action type="shell_command">git clone git://github.com/dzerbino/velvet.git</action>
7 <action type="shell_command">git reset --hard 9adf09f7ded7fedaf6b0e5e4edf9f46602e263d3</action>
8 <action type="shell_command">make 'MAXKMERLENGTH=70'</action>
9 <action type="move_directory_files">
10 <source_directory>.</source_directory>
11 <destination_directory>$INSTALL_DIR</destination_directory>
12 </action>
13 <!-- <action type="move_file">
14 <source>velvetg</source>
15 <destination>$INSTALL_DIR</destination>
16 </action>
17 <action type="move_file">
18 <source>velveth</source>
19 <destination>$INSTALL_DIR</destination>
20 </action> -->
21 <action type="set_environment">
22 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR</environment_variable>
23 </action>
24 </actions>
25 </install>
26 <readme>
27 </readme>
28 </package>
29 </tool_dependency>