Mercurial > repos > drosofff > msp_sr_bowtie_cascade
comparison sRbowtieCascade.xml @ 3:0052d1dd31df draft default tip
planemo upload for repository https://bitbucket.org/drosofff/gedtools/
| author | drosofff |
|---|---|
| date | Mon, 29 Jun 2015 05:54:27 -0400 |
| parents | 0dfcb397699e |
| children |
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| 2:e9030142ab41 | 3:0052d1dd31df |
|---|---|
| 59 <param name="genomeSource" type="select" label="Will you select a reference genome from your history or use a built-in index?" help="Built-ins were indexed using default options"> | 59 <param name="genomeSource" type="select" label="Will you select a reference genome from your history or use a built-in index?" help="Built-ins were indexed using default options"> |
| 60 <option value="indexed">Use a built-in index</option> | 60 <option value="indexed">Use a built-in index</option> |
| 61 <option value="history">Use one from the history</option> | 61 <option value="history">Use one from the history</option> |
| 62 </param> | 62 </param> |
| 63 <when value="indexed"> | 63 <when value="indexed"> |
| 64 <param name="index" type="select" label="Select a DNA reference index" help="if your genome of interest is not listed - contact GED team"> | 64 <param name="index" type="select" label="Select a DNA reference index" help="if your genome of interest is not listed - contact instance administrator"> |
| 65 <options from_data_table="bowtie_indexes"/> | 65 <options from_data_table="bowtie_indexes"/> |
| 66 </param> | 66 </param> |
| 67 </when> | 67 </when> |
| 68 <when value="history"> | 68 <when value="history"> |
| 69 <param name="ownFile" type="data" format="fasta" label="Select a fasta file, to serve as index reference" /> | 69 <param name="ownFile" type="data" format="fasta" label="Select a fasta file, to serve as index reference" /> |
| 76 <param name="genomeSource" type="select" label="Will you select a reference genome from your history or use a built-in index?" help="Built-ins were indexed using default options"> | 76 <param name="genomeSource" type="select" label="Will you select a reference genome from your history or use a built-in index?" help="Built-ins were indexed using default options"> |
| 77 <option value="indexed">Use a built-in index</option> | 77 <option value="indexed">Use a built-in index</option> |
| 78 <option value="history">Use one from the history</option> | 78 <option value="history">Use one from the history</option> |
| 79 </param> | 79 </param> |
| 80 <when value="indexed"> | 80 <when value="indexed"> |
| 81 <param name="index" type="select" label="Select a DNA reference index" help="if your genome of interest is not listed - contact GED team"> | 81 <param name="index" type="select" label="Select a DNA reference index" help="if your genome of interest is not listed - contact instance administrator"> |
| 82 <options from_data_table="bowtie_indexes"/> | 82 <options from_data_table="bowtie_indexes"/> |
| 83 </param> | 83 </param> |
| 84 </when> | 84 </when> |
| 85 <when value="history"> | 85 <when value="history"> |
| 86 <param name="ownFile" type="data" format="fasta" label="Select a fasta file, to serve as index reference" /> | 86 <param name="ownFile" type="data" format="fasta" label="Select a fasta file, to serve as index reference" /> |