Mercurial > repos > drosofff > msp_sr_bowtie

diff sRbowtie.xml @ 6:738a39851eae draft

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planemo upload for repository https://bitbucket.org/drosofff/gedtools/
author mvdbeek
date Thu, 11 Jun 2015 09:22:04 -0400
parents 0975f2267809
children 5d82f9b15957
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--- a/sRbowtie.xml	Thu Jun 11 09:07:35 2015 -0400
+++ b/sRbowtie.xml	Thu Jun 11 09:22:04 2015 -0400
@@ -105,7 +105,7 @@
             <param ftype="fasta" name="input" value="input.fa" />
             <param name="v_mismatches" value="1" />
             <param name="output_format" value="bam" />
-            <output file="output.bam" ftype="bam" lines_diff="4" name="output" />
+            <output file="output.bam" ftype="bam" compare="sim_size" delta="1000" name="output" />
         </test>
         <test>
             <param name="genomeSource" value="history" />
@@ -114,7 +114,7 @@
             <param ftype="fastq" name="input" value="input.fastq" />
             <param name="v_mismatches" value="1" />
             <param name="output_format" value="bam" />
-            <output file="output2.bam" ftype="bam" lines_diff="4" name="output" />
+            <output file="output2.bam" ftype="bam" compare="sim_size" delta="1000" name="output" />
         </test>
     </tests>
     <help>