Mercurial > repos > drosofff > msp_cap3

annotate test-data/contigsandsinglets.fa @ 7:858e4f25ec2d draft default tip

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planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/msp_cap3 commit 91a0ccc6289f607b16e9ed2482e256c10704f034
author drosofff
date Wed, 28 Oct 2015 13:27:05 -0400
parents 4cf7201615f5
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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4
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1 >Contig1
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2 GTTGCATATTCAACCTGCCGAGCCCAGGAAGACTCAGGCGGGGGAGGCACTACATTAGGG
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3 GTCGCAAAGCTAGACTTCTTGTATGGGATGTTGTTAACCTCCAAAATAGCTGCACAGATG
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4 TATTCCTTAGCCAGTTTGGCAGAGGAAGACCAGGCTTCTCCCAACAGCTTCACATCCTGG
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5 GTATGGTGGCTGTGGGCGTAGAGCCTAACTCCAACAGGATTGGCAGCATTTGGCCGTACC
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6 TCAGATATCCATTTAGTGAATCCTGAGAATCTCCCGCTGACCATTGCATGGACATATGCC
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7 ATGGCATCCTCTGCTGTATTTATATCGTGGGGAGGTGGATGGAGGTTCGATACTCCTGCA
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8 ACGTCCAGGTTAATGAGCTCAGGTTGGGTTTTTACAATCTCCCGTCTCAAAGCTGACGTT
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9 CTGGCTGCAGTAGTCTTATCAATCAGATTACGCTTTTCCTCCATTTCTTCTCTTTGACTG
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10 TCCTGCAATGTGGGGAAAGGAGTCACTAGTGGGTATAAGGAAATCAAGTCTCCAAGTTCA
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11 TCTCCAGTAGTGAAATAGCCCCCTTTAGCAGCACCCACAACAATTTGGTAGGCACTAGCT
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12 CCAACTTTATCGGCAACAGTACCAACCTGAGAAACACCTCCAACTGAGGTAAGCCATCTA
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13 ACGACGGCTTGAGCCATATTTGGTAGGAATTTCTCAGGGATGTCACCACTTTCTGTGATC
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14 CGAACTACTTTGGGTCTGGGGTTCGGTTCTGAATACTGGACTTGCTGAGGTCTAAGAGCC
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15 TCAAACACTTTGTACTCATCATTCAGATTCGCCTCAGGAGGAGGAGGGCATCCTACAACC
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16 TCCTTGACATCATAGTCGTTGGATTGGACTGTCAAATTTATCTGCCTCACAGCCACTCTC
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17 TGCTCCCTCTTAAACTCGTCCAGGAATCCTGACAATGTGGGGAACAGATTAATCCATCCC
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18 GCTTTGTCATCCTCTCCATCTGAATAGAGGTCTAGACAGAAGTCCCGAGAGGGGAATCCT
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19 GACGAATCTGGATATTCAAAGTCCTGGAGGGTTATATGTTCTGGCTTCGTTCCGGTTTGC
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20 TCTTGCGTTTGCATGACAATAATCTCGCCGGGGATTGTGTTAACCACAGCGTGTATTGTC
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21 TCTTCGATCCGAGGTATGCTGAATCCCATTGTTATCATTAAACCCCTCATACGGTCATAC
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22 AGAGTTCTTTGGCGTGCCGTTCTAGATACTGCCTTTTCAAAGGGATTATCCTTCTGGCAG
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23 AGCATCATCTCAAGAGCATCGCTCTCAGGCATTGTGGGGACATGTATCACACGGTGTCTG
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24 TGGTACACTCCCATAATTTGTACGCCAAGAAATTTGTGGTCCGTAATTAGAC
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25 >Contig2
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26 TGGATTTTCATCCATTGCTGGAGGGCTTACTAGGATGGTCGACTGGATGTATGCCTGCCC
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27 AAAGCGGCGGGGACGGGTTGTCTGTTACGGTGACGATGCATGTATAACATTTTGGAGCCA
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28 GGGCGTCCTCTATCGGGTGGATCCAGATTTTAAACAAATGGACGGGTCCATAGATAGAGA
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29 GGATGCAAGAATCACCATTGAGTGGGTCCTCCACCATCTCAGAAAGGATTTAGGTGTAGA
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30 GGAGACCCCTGCTTTTTGGAAGACAGTTGCAGCAGTGTGGCTTGATATGGCCATTGACCC
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31 CCACTTTATCGTGGATGGTAAAACTGTTTACAAGAAGAAGAACCCCCATGGACTCATGAC
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32 TGGAGTTCCAGGAACAACCCTATTTGACACTGTGAAATCTGTAATAGTCTGGAATGAAAT
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33 GTTGGATCAGGCTGGTGCAGGTTCCATAGACCTTTTAAATGAAGCTCAAGTAGTTGAATG
4cf7201615f5 planemo upload for repository https://bitbucket.org/drosofff/gedtools/
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34 GATGAAGAGACAAGGCTTAGTTGTCAAAGAGGGAA
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35 >Contig3
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36 AACGTAAAACAAACGACATGGATGCATCTAACCCTATTATTTCAAGCGATAGAAGCACTG
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37 TGAATCAGGTTTACGCGAAGATGGTGAGGAGAAAACGGCAAGATCTTGCCTATCTCCAGG
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38 AGTTGGTGAGGACAGCCCATCGAGAGATTCTCCCCCAAGGAGAACTTCTCCATGAGTCGG
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39 AAGCCAAACAGTATGTAGCCGAATATAAGGCTCGACTACCTGTGGTTGACACTAAGAAAG
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40 TTGGCGAACTGCCAACTGAGGTCTTCCAGGTAGCACTCCCAAGT
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41 >Contig4
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42 TACGGTGCCCCTAAGAGAATCGAACTCAAACTCTCCAGTTGTGTAGTAACCAGAGAGCCA
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43 CCGAGGAGGGACGGGGTGGTGATTATGAAAAGATGATGGGTTTTGGGGAGAGGTTATACA
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44 ATTTCAAAATCTTGAACGGCCACTGGGTCTTCAGATATCACTTTGAAAGGACTGAGTGTC
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45 GTTCCATCAGGCATACCCTCAAGTTTGGTCCTAATCTTAGCTGTGTCCTTGCTGAGAGCA
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46 ACAGTTCTTGTTA
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47 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_29_Transcript_1/1_Confidence_0.000_Length_607_hit1_IdMatch=97.7,AligLength=608,E-val=0.0
4cf7201615f5 planemo upload for repository https://bitbucket.org/drosofff/gedtools/
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48 ACGCCCGAGAGCGTGGTCTTGGGCATGGCACTGTAGGCGACCTGACTCCCAGACTTTCGA
4cf7201615f5 planemo upload for repository https://bitbucket.org/drosofff/gedtools/
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49 GGGCGATTTCGCCCTCTTCGACGGGGTCCTTGAACCATTGAGCAATTCTTTCCCACAATT
4cf7201615f5 planemo upload for repository https://bitbucket.org/drosofff/gedtools/
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50 TGACGAGAAGATACACTCTGTACGGTAACCTTGGGGGAACGACGGTTTCTGGTGGAAAGA
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51 TTGTTTCCACTGTTGTTTGATATGCGCTTTGTAGTTGTGACGATGGTGGCCATGGCATAA
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52 TATTTACAAATTGTATTCTTGATTTGAGTTTGGGTTGTTTGATGTTATAGGGTCGGCAAG
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53 AGCTTACTTGCAGTTCTCTTCCTCTTTTTGCGGTCGAGAGTCTTTTTGTTGAGTCTCGTC
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54 CTTTGTTCTGCGGTCAGCAGTGATCTCTTCGATGCTACTTTAGGAGGTGGAAACCGGGAG
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55 AATAAGTCTTGAATTCTCACACGGTAGTCATCAGGATTTTTATGACTAACCTCTCTAATA
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56 AGCATCTGCACCTGGCGGGGACAGTGCCCCGGGAATTGCTGCATTATACTGTGAAACAGC
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57 TCCAAATCCAGGGTTTCATGAACGGGCACAATCTGTGGCACAGCTTTAGGGGCAGTTGCA
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58 TATTCAA
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59 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_27_Transcript_1/1_Confidence_0.000_Length_471_hit1_IdMatch=97.66,AligLength=471,E-val=0.0
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60 GCAAAAAGAATGCCTCTGATAGGGCAATCATAAAACTGTTAAACAAATACATGCCTAGGA
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61 CAGGAAATAAGAACTGGCCTGGTGTCCATACAACCCCGGAAGAAGGCATACTTGATGGTA
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62 TTAAGATAACGGCCAAATCCAGTGCAGGCGCTCCCTATTGGAGACACAAGGGGGAATGCC
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63 TAGACCATATAATTGATACTGGACTTCCTGTTGTGCTAAAGCATATAAAGGAAGGAACCC
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64 TCAATCAGTTGTGGCGGGAAAACCCTGAGATGTTCCTCGTTGAAGTTAAGAACAAACTTG
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65 ATAGATACGAGGTTTCGAAGCTTAAAGAGAAGACTAGACCCTATGTGTGTGTACCTGCGC
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66 ACTGGGCTCTCCTATTCTCGTGCTTGACTCAAGGATTCCAAGAAGGACTTCAAGTTTTTA
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67 GTAACTTGGACCCCAGTACAGAATGCTCGAATGCATATGGATTTTCATCCA
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68 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_14_Transcript_1/1_Confidence_0.000_Length_210_hit1_IdMatch=98.1,AligLength=210,E-val=3e-98
4cf7201615f5 planemo upload for repository https://bitbucket.org/drosofff/gedtools/
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69 TGTCCCGTTGCACCCCCCATCCATTAACAATCGGGGTGGGCATACTCATGTCACTCGCCA
4cf7201615f5 planemo upload for repository https://bitbucket.org/drosofff/gedtools/
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70 GATGGGCGGAGTACCTCACCCTCCTCTTGGTCTAATACCCATAGCTCAGAAGTACGGGGT
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71 AGAGATCTTGGACCAGAAACATGTCTACACAGGAGGCACTTGGGATGGCTTTCTTAATAG
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72 ACTCGCCCAACAGATGGGCCGGACAACGGT
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73 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_24_Transcript_1/1_Confidence_0.000_Length_280_hit1_IdMatch=96.79,AligLength=280,E-val=4e-129
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74 ACCATTTGTCCCCCATGGTGCATTTTCATGGTAAGGTAGTCACTGTTCCAGGAACCATCT
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75 GAGGTGGTAAAAAGGTCCTGGAAACCAGTATCTGGAGTGATATCCTCGTCAATGGAGACA
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76 GCTCCTAATTCAGCACCTTCAAACTCAATCACCCATTCGAGTGTGACAGTGAAGGTGGTG
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77 CTTCCTGTGTATCCACCGGTGGTAGAGGCAACAACCACATTGATGAAGCCATGATTGGCG
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78 TCATCAGGGTTGCCTTTGGTGAGATACCACTTACGGGTGG
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79 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_22_Transcript_1/1_Confidence_0.000_Length_289_hit1_IdMatch=95.5,AligLength=289,E-val=1e-128
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80 GGCCTGCAGGCCATAACTCGGTTGAGGTTTTGAGTGTCATTGCCTGAGATATTGTTGGCG
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81 GGGTCTGGAGACCATCCTATGGCAAGGGATCCAAAAGTATTTGCACTTCCAGATCCCACT
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82 ACCAGCACTCGGAGTTTCTTGGGTCGCCAGCGGGAATATAGCTTACTCTGCTGCTGAAGC
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drosofff
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83 CTAGAATCACTCATAGCCGTTGGACATATGGCTTGAGCAAAAAGGCTAGCTCCCACTGCG
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drosofff
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84 CGCTGCGGTTGTACCTCAATAACGCCTATAATGTCCACGCCCGAGAGCG
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85 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_20_Transcript_1/1_Confidence_0.000_Length_352_hit1_IdMatch=98.01,AligLength=352,E-val=8e-171
4cf7201615f5 planemo upload for repository https://bitbucket.org/drosofff/gedtools/
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86 GCATTCACTGCTCTAAGTTGCTCGGTCAGCTGGTCAATGCGGCGAAGTAGATTAGTTTCG
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87 ACAGTCTGAACTGCTTCATCAGCCACCCTAAATTTAGGGATGGGAGGGCTAATGACAGGA
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88 CCTTGGGTGTAATACTTGAGACATTTGCCAGTATCTCCAGTGCGGATATAATCTTTTGCA
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drosofff
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89 TCTGTGTAACTGGCAAACATAACAAAACCTGGGATAGAGTAACCTTGTATAACTGCAAAG
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90 AAGTTTGCTGTCTTCAAGGTCGTCTTGTCCTCAAGGTAGTAGGTTACATTTGTCCCTGGT
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91 GCATTTGTATACACATAAGCCTGGTGGGCAGCCGAAAAGGGGACCATTTGTC