Mercurial > repos > drosofff > msp_blastparser_and_hits

comparison BlastParser_and_hits.xml @ 7:72ef366ef55e draft

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planemo upload for repository https://bitbucket.org/drosofff/gedtools/ commit 319fbe5bf4fe32ab9329a411a0d0bd70b83efd9a
author drosofff
date Wed, 16 Sep 2015 06:11:35 -0400
parents 3f7cfa1cf90c
children efb051ac0da9
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6:3f7cfa1cf90c 7:72ef366ef55e
1 <tool id="BlastParser_and_hits" name="Parse blast output and compile hits" version="2.3.0"> 1 <tool id="BlastParser_and_hits" name="Parse blast output and compile hits" version="2.3.1">
2 <description>for virus discovery</description> 2 <description>for virus discovery</description>
3 <requirements></requirements> 3 <requirements></requirements>
4 <command interpreter="python"> 4 <command interpreter="python">
5 BlastParser_and_hits.py 5 BlastParser_and_hits.py
6 --sequences $sequences 6 --sequences $sequences
64 64
65 <help> 65 <help>
66 66
67 **What it does** 67 **What it does**
68 68
69 Parse blast outputs for viruses genome assembly. Outputs analysis and hit sequences for further assembly. Output also the contig sequences which have or not been blast aligned with the indicated cut-off 69 Parse blast outputs for viruses genome assembly. Outputs analysis and hit sequences for further assembly. Outputs also the contig sequences which have or not been blast aligned taking into account all indicated cut-offs
70 70
71 </help> 71 </help>
72 </tool> 72 </tool>