Mercurial > repos > drosofff > cherry_pick_fasta

annotate test-data/output.fa @ 9:fb7f833cce11 draft default tip

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planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/cherry_pick_fasta commit b6de14061c479f0418cd89e26d6f5ac26e565a07
author drosofff
date Wed, 09 Nov 2016 11:31:47 -0500
parents 80ffd10e423d
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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7
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1 >gi|81971654|sp|Q9IJX4.1|POLN_CRPVC_RecName:_Full_Replicase_polyprotein;_Contains:_RecName:_Full_Pro--Locus_65_Transcript_1/2_Confidence_0.667_Length_1344_hit1_IdMatch=43.46,AligLength=451,E-val=2e-122
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2 TAGATAAGGTTTGCTCATTTCTTGAGGATGCTTTACCAGGTATGGTCGAGCACGTTACGC
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3 TCGTAGCACAAAATACATCCGCGTCAGCCAAGGTGTTATCTGACGAGTTGATCAAATCAA
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4 TGCTTTGCATTGTTTTGATTTGCTTGTTGATTGAAACCAAGTTCTATAAGACCGCTTTCG
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5 CGGTACTTATAGTGGTTGCTCTACGTGTTTTCGGGTACAGTGAGCAAATAATTGAGACAG
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6 CTATGGACATGTATCGCGTAATTAGGGCTCCAAAGGCTCAAGGTAATATGGAAGATGTCG
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7 TTTTCCATCCGTGGTTGAACACGTGTGGAAAGTTGATTTTCCTACTTATCGCTGTCCTGT
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8 GTCTCAAGAAATTACCAGGAAAGAACGACGTAGACACTTTCATGCGCAGGCTCGACAGCT
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9 TACCCAAAGCTGTTAAGGGTGCGACACAACTACATGAATGGGTGTCAAAATACTTCGATC
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10 TCTCTTTGGATCACGTCAAGGCGATGATTGTTGGTAAATCTTGTGCCGAAATGAAGAAGG
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11 CTGAATCATCAAGCGCCAAAGTTTTGGCTTGGGCCGCTAGAGTTCAAGATTTCGTCAGAT
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12 TGGAACAACGAAGTAAAATCGATAGTGATATCGCTGTCGCCAACGAGGCTGAAGCCTTGT
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13 ATCACACTGGATTGCAATTTGCAGGAGACACTCTGTTACCTCCAGAATTGCACAAGGTCG
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14 TGAACAGTGCGCTAAGACCAGCCCGCGATATATATGAGTACGTCACCCGCTCCCCAATAA
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15 AAGGAGGGAGTCGTAAGATGAGACCCTTGATGATTTGGCTAGCTGGCCAGTCAGGAATTG
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16 GGAAAACCTCTATGGTGGATCCTCTATGTATCGATTTGCTTCGAGCAATGGGTTATGTGG
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17 GACCTGAACATCTCCACTCGTTGGTGTATGGCCGCCAAGTTGAGACGGAGTACTGGGATG
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18 GTTACAAAGCCCACAAGATAGTGATCTATGATGATGCTTTTCAGCTGAAAGATGATGCTG
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19 TGAACAGGAATTTGGAGGTATTTGAGGTTATACGTTCTTGCAACACGTATCCTCAACACC
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20 TTCATATGGCTTGTCTCTCGGATAAAAACACTTTTTCAGTAGCGGAAGTGTACATCTACA
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21 CTACCAACGAAATGAATGTCAAACTTGAGTCGCTGACTCATGAACAAGCATTCTACAACC
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22 GCATGAGTGAAAACGCGTTCACTGTGCGTCCAAAAGAGGCTTATCGTCTAGTCGAAGAAG
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23 GATCAACCGGCAATAAGCAGTATCGTTTGGACAAAACGAAAACCAAAGGAGCTATCGATC
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24 TCGATGTGTACGAATTCGTGCGC
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25 >gi|81971654|sp|Q9IJX4.1|POLN_CRPVC_RecName:_Full_Replicase_polyprotein;_Contains:_RecName:_Full_Pro--Locus_63_Transcript_1/2_Confidence_0.333_Length_1607_hit1_IdMatch=52.99,AligLength=536,E-val=0.0
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26 CTAGAATCACAGCTCAGATGAGTTTTGAGGCACCGAAGGACGCAATTGAAGGACCGTGTC
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27 AAACCCCGGAAGGATTGTTCGCCCCTATTGGCAAAGCGCCGATAGGCGTAGGGATGTCCA
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28 CCAAGACGGCTATACGACCTTCACGCTTGTATGGAAGAATAACTAAACCGACAACTGCAC
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29 CATCATACTTGGGTAAAGACGCGCTTTATCGTGGATTGACCAAGTGTGGTGTTCGCACAG
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30 TTAATATTCAACCAGAATACATAGACGCAGCGGCGAATGACGTCGCACGCTATGTGTTAA
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31 ACCAGCATGTTGGTCACGTGGATAGGGAACGATACACACGTATATTGTCGTACGAGGAGG
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32 CTGTTAAGGGCGTGCCGTACGATGATTTCATGAAGTCAGTGACTCGAGTCACTTCCCCTG
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33 GTTACCCCTATTGCTTGGATACTGGAAACATGCCAGGGAAAAGCAAATGGATGGGGCTCG
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34 AACAAGATTTCGATATGACAAGTCCAGCTGCTTTGGCTTTGAGGAAAGATGTTGAAAGTT
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35 TGTTGGAAGATTGCAAAAATGGCTTAGTCCGTGATGTGGTGTTTGTCGACACTCTCAAGG
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36 ATGAAAGGCGCGAGCTGATAAAGGTGGAAGCAAAGAAGACTCGAGTCTTTTCTGCTGGAC
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37 CACAGCATTTTGTAATAGCTTTCCGGCAATACTTTCTTCCATTCTCTGCCTGGGTCATGC
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38 ATAACAGAATCGAAAACGAAGTAGCCGTTGGAACAAACCCCTTCTCAATGGATTGGCACA
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39 ACATTGCTGTGCGTATGCGTAGTAAAGGGAGACACATTATTGCTGGAGATTTTAGCAATT
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40 TTGATGGATCCCTCAACGCCCAAGTTCTCTGGACAATATTTTGGAAGATATTTGTCCCGT
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41 GGCTTAATGATATTGAACCACTTGGTACACCCAAGAATGAGGAGAATCTGCGGGTCTGCA
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42 CGAGTCTATGGACGCACTTGGTGCACTCCGTGCACATTTGTGGAGATAACTTGTACATGT
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43 GGACACATTCTCAACCATCGGGCAATCCCTTCACGGTGATAATCAATAGTTTGTATAACT
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44 CAGTTATCATGCGTGTCGTGTGGCAATACATAATGGCGAAAGAAGAACCTAAGTTACGCA
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45 CAATGAACCATTTCAATCAACATGTTGCTATGGTTTCATATGGTGATGACAATCTACTTA
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46 ACATCTCGGAAGGGGTAATTGATATCTTCAACCAACTTACCATCTCGGAAGCCATGCGTT
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47 GGATAGGACACGAATACACAGATGAAACGAAAACAGGCGAGGCTGCGCCCTATCGGACAT
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48 TGGAAGAAGTCCGTTTCCTTAAAAGAGGGTTCAGAATGGATCACCTCTTGTGTCGGTGGG
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49 TAGCTCCTTTGAAGAAGGATGTCATCTACGAAATGCTTAATTGGACGCGCAAAGGGATTA
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50 ACCCAGATGATGTGACGATGATGATCATTGATACAGCATTTAGGGAGATCTCTTATCACG
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51 GAAGGGAAGCTTTCGAGAAGCTGCGAGGGCAGATACTTGAGCAGCGGGATGTGTTGGTTG
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52 AATATCCTCAA
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53 >gi|81971654|sp|Q9IJX4.1|POLN_CRPVC_RecName:_Full_Replicase_polyprotein;_Contains:_RecName:_Full_Pro--Locus_50_Transcript_1/1_Confidence_0.000_Length_1442_hit1_IdMatch=24.95,AligLength=537,E-val=8e-47
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54 GAATTCGTGCGCATGCAAAGAATAAATGACCACCCTTCGGGTTGGAAAGCTACGGATGAA
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55 GTATATGGCTATGCAGAGTTCTCGAAACTAATGTGTGCTGAATGGAAGAGAAGGAAGACA
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56 GAACATCAGAATACTGTTGACTTCCTTAAGAAGTATGCAGAGCGACCCTTCGAGACCAAC
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57 CCCGGACCAGTGGAGGATATCCCAATAAGACACGATGATGTCGAGCAGGGGGTAGAAGCG
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58 CAGATGGGTCGAGATGCAGATTGGTTTAACAATGACATAGCGGAACGTATAGCGCGTGGA
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59 CAGGATATTACTGATATCTTGTATGAGTATGCTGAAGATGACGAGTTGCATGAGGATTAC
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60 ATGGCTTACAAGAAACAGCAGGCCCAGCCTAGTAAGTGGGACAAATACGCGCGCCGTCTC
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61 GAAAGTGCAATTACGGAAGGAAAGAATTTCCTTGCCCGTGTGGTTTCAAAAATAGCCAGC
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62 GTCATTCGGGAGAACCCATATTTGACCATGATGGCAACTGTGGGGAGCGTTCTCGCTCTG
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63 TATGGAGCTATGCGTTGGTTTTCGAAAGGAGTAACGGAGACTTTTGACGCTGAAGAAGTT
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64 ACTATTCCCAACGAAACCAAGGTAGAGAACGTTGTGCGTACGGAGGGTTTTGAATCTTAC
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65 GACCATCGGACTCCGCGCGCTCATCGAGCCAACAGGCAATATGTGCGAGCTGAGGCGATG
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66 ATAGATGAAACAGGGTACCTGGTAGCCAACAACAAAGTCACTGGCAACACGTATCGAATG
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67 TGTATCAAGAGGGATCCTGATGATTTGGTCGTTGGAAACGCTGTGTTTATCACAGGGTGG
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68 ACGCTCCTCATACCGTACCACTTCGTTTGTGGACTGGCGGGACGGAGAATAGCTGCTGAT
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69 TCCATCGTGACTTTGTCAAAGCCAGGCTTGGATAAGATTATTGAATTCCCGTTGTCACGA
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70 ATCTTCCGATACGATACCTCACCAGATGGTTTTACCACTAGTGAGTATTGTGCTCGAATG
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71 GAACATGAAGATGGAGAATTGGTTGATGCCATCCTGGTAAACCTGCATGGTTTGGGAGTG
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72 CGAATCCATCCTGACCTCCGGGGAAAAATTGTGACGGTACGAGACCAAGCGCACCTGAGT
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73 ACGACATTTCATGCGATTCTCACAACGATGTCCAGGAAGCCACCACTAACAACGTCACAA
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74 CAAGTGGTAAAAGGGGTCAAGCCAATGGATAAAATCCTGCACATCAATTTACCAGTTGGG
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75 GACAAAACAACGCAATACACCCAACGTGACTGTTACAAGTATTATTCCGTAACGGTCGTT
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76 GGAGATTGTGGTGCCTTGCTGGTAGCACAAAATCATGCAATTGTGAGGAAAATATTTGCA
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77 ATGCATATAGCAGGTGCGGAAGAAAATGGCTATGCTTGTCCAATCAATCAGGAAATGTTA
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78 G
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79 >gi|81971654|sp|Q9IJX4.1|POLN_CRPVC_RecName:_Full_Replicase_polyprotein;_Contains:_RecName:_Full_Pro--Locus_63_Transcript_2/2_Confidence_0.333_Length_343_hit1_IdMatch=50.86,AligLength=116,E-val=6e-30
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80 ACACAGTCCACAGTCCGAAGACCAAAGCGTTGGATAGGACACGAATACACAGATGAAACG
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81 AAAACAGGCGAGGCTGCGCCCTATCGGACATTGGAAGAAGTCCGTTTCCTTAAAAGAGGG
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82 TTCAGAATGGATCACCTCTTGTGTCGGTGGGTAGCTCCTTTGAAGAAGGATGTCATCTAC
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83 GAAATGCTTAATTGGACGCGCAAAGGGATTAACCCAGATGATGTGACGATGATGATCATT
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84 GATACAGCATTTAGGGAGATCTCTTATCACGGAAGGGAAGCTTTCGAGAAGCTGCGAGGG
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85 CAGATACTTGAGCAGCGGGATGTGTTGGTTGAATATCCTCAA
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86 >gi|81971654|sp|Q9IJX4.1|POLN_CRPVC_RecName:_Full_Replicase_polyprotein;_Contains:_RecName:_Full_Pro--Locus_65_Transcript_2/2_Confidence_0.333_Length_1324_hit1_IdMatch=43.5,AligLength=446,E-val=1e-119
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87 CTTGAGGATACTTTACCAGGTATGGTCGAGCACGTTACGCTCGTAGCACAAAATACATCC
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88 GCGTCAGCCAAGGTGTTATCTGACGAGTTGATCAAATCAATGCTTTGCATTGTTTTGATT
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89 TGCTTGTTGATTGAAACCAAGTTCTATAAGACCGCTTTCGCGGTACTTATAGTGGTTGCT
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90 CTACGTGTTTTCGGGTACAGTGAGCAAATAATTGAGACAGCTATGGACATGTATCGCGTA
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91 ATTAGGGCTCCAAAGGCTCAAGGTAATATGGAAGATGTCGTTTTCCATCCGTGGTTGAAC
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92 ACGTGTGGAAAGTTGATTTTCCTACTTATCGCTGTCCTGTGTCTCAAGAAATTACCAGGA
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93 AAGAACGACGTAGACACTTTCATGCGCAGGCTCGACAGCTTACCCAAAGCTGTTAAGGGT
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94 GCGACACAACTACATGAATGGGTGTCAAAATACTTCGATCTCTCTTTGGATCACGTCAAG
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95 GCGATGATTGTTGGTAAATCTTGTGCCGAAATGAAGAAGGCTGAATCATCAAGCGCCAAA
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96 GTTTTGGCTTGGGCCGCTAGAGTTCAAGATTTCGTCAGATTGGAACAACGAAGTAAAATC
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97 GATAGTGATATCGCTGTCGCCAACGAGGCTGAAGCCTTGTATCACACTGGATTGCAATTT
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98 GCAGGAGACACTCTGTTACCTCCAGAATTGCACAAGGTCGTGAACAGTGCGCTAAGACCA
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99 GCCCGCGATATATATGAGTACGTCACCCGCTCCCCAATAAAAGGAGGGAGTCGTAAGATG
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100 AGACCCTTGATGATTTGGCTAGCTGGCCAGTCAGGAATTGGGAAAACCTCTATGGTGGAT
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101 CCTCTATGTATCGATTTGCTTCGAGCAATGGGTTATGTGGGACCTGAACATCTCCACTCG
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102 TTGGTGTATGGCCGCCAAGTTGAGACGGAGTACTGGGATGGTTACAAAGCCCACAAGATA
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103 GTGATCTATGATGATGCTTTTCAGCTGAAAGATGATGCTGTGAACAGGAATTTGGAGGTA
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104 TTTGAGGTTATACGTTCTTGCAACACGTATCCTCAACACCTTCATATGGCTTGTCTCTCG
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105 GATAAAAACACTTTTTCAGTAGCGGAAGTGTACATCTACACTACCAACGAAATGAATGTC
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106 AAACTTGAGTCGCTGACTCATGAACAAGCATTCTACAACCGCATGAGTGAAAACGCGTTC
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107 ACTGTGCGTCCAAAAGAGGCTTATCGTCTAGTCGAAGAAGGATCAACCGGCAATAAGCAG
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108 TATCGTTTGGACAAAACGAAAACCAAAGGAGCTATCGATCTCGATGTGTACGAATTCGTG
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109 CGC