# HG changeset patch # User drosofff # Date 1478709576 18000 # Node ID 1f829c8efdb20ffb8eeaacc26139aed0774f6cfc # Parent 9516d0cec35b7099cf5584ba8cb9a43b43d0bb2f planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/blastx_to_scaffold commit b6de14061c479f0418cd89e26d6f5ac26e565a07 diff -r 9516d0cec35b -r 1f829c8efdb2 blastx_to_scaffold.xml --- a/blastx_to_scaffold.xml Tue Jun 09 05:53:39 2015 -0400 +++ b/blastx_to_scaffold.xml Wed Nov 09 11:39:36 2016 -0500 @@ -30,7 +30,7 @@ **What it Does** -This tool start from DNA contigs that aligned to a subject protein sequence through blastx. +This tool starts from DNA contigs that aligned to a subject protein sequence through blastx. The contigs must be provided in fasta format. The blastx output must be tabular, the 12 standard column plus column 13 with the length of the blastx subject. The final scaffold is a DNA sequence. Sequences of the subject protein which were not aligned to the contigs are replaced by Ns in this scaffold.