annotate test-data/contigs.fa @ 2:1f829c8efdb2 draft default tip

planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/blastx_to_scaffold commit b6de14061c479f0418cd89e26d6f5ac26e565a07
author drosofff
date Wed, 09 Nov 2016 11:39:36 -0500
parents 9516d0cec35b
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
1
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
1 >Contig1
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
2 TAGATAAGGTTTGCTCATTTCTTGAGGATACTTTACCAGGTATGGTCGAGCACGTTACGC
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
3 TCGTAGCACAAAATACATCCGCGTCAGCCAAGGTGTTATCTGACGAGTTGATCAAATCAA
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
4 TGCTTTGCATTGTTTTGATTTGCTTGTTGATTGAAACCAAGTTCTATAAGACCGCTTTCG
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
5 CGGTACTTATAGTGGTTGCTCTACGTGTTTTCGGGTACAGTGAGCAAATAATTGAGACAG
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
6 CTATGGACATGTATCGCGTAATTAGGGCTCCAAAGGCTCAAGGTAATATGGAAGATGTCG
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
7 TTTTCCATCCGTGGTTGAACACGTGTGGAAAGTTGATTTTCCTACTTATCGCTGTCCTGT
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
8 GTCTCAAGAAATTACCAGGAAAGAACGACGTAGACACTTTCATGCGCAGGCTCGACAGCT
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
9 TACCCAAAGCTGTTAAGGGTGCGACACAACTACATGAATGGGTGTCAAAATACTTCGATC
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
10 TCTCTTTGGATCACGTCAAGGCGATGATTGTTGGTAAATCTTGTGCCGAAATGAAGAAGG
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
11 CTGAATCATCAAGCGCCAAAGTTTTGGCTTGGGCCGCTAGAGTTCAAGATTTCGTCAGAT
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
12 TGGAACAACGAAGTAAAATCGATAGTGATATCGCTGTCGCCAACGAGGCTGAAGCCTTGT
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
13 ATCACACTGGATTGCAATTTGCAGGAGACACTCTGTTACCTCCAGAATTGCACAAGGTCG
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
14 TGAACAGTGCGCTAAGACCAGCCCGCGATATATATGAGTACGTCACCCGCTCCCCAATAA
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
15 AAGGAGGGAGTCGTAAGATGAGACCCTTGATGATTTGGCTAGCTGGCCAGTCAGGAATTG
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
16 GGAAAACCTCTATGGTGGATCCTCTATGTATCGATTTGCTTCGAGCAATGGGTTATGTGG
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
17 GACCTGAACATCTCCACTCGTTGGTGTATGGCCGCCAAGTTGAGACGGAGTACTGGGATG
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
18 GTTACAAAGCCCACAAGATAGTGATCTATGATGATGCTTTTCAGCTGAAAGATGATGCTG
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
19 TGAACAGGAATTTGGAGGTATTTGAGGTTATACGTTCTTGCAACACGTATCCTCAACACC
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
20 TTCATATGGCTTGTCTCTCGGATAAAAACACTTTTTCAGTAGCGGAAGTGTACATCTACA
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
21 CTACCAACGAAATGAATGTCAAACTTGAGTCGCTGACTCATGAACAAGCATTCTACAACC
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
22 GCATGAGTGAAAACGCGTTCACTGTGCGTCCAAAAGAGGCTTATCGTCTAGTCGAAGAAG
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
23 GATCAACCGGCAATAAGCAGTATCGTTTGGACAAAACGAAAACCAAAGGAGCTATCGATC
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
24 TCGATGTGTACGAATTCGTGCGC
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
25 >Contig2
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
26 CTAGAATCACAGCTCAGATGAGTTTTGAGGCACCGAAGGACGCAATTGAAGGACCGTGTC
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
27 AAACCCCGGAAGGATTGTTCGCCCCTATTGGCAAAGCGCCGATAGGCGTAGGGATGTCCA
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
28 CCAAGACGGCTATACGACCTTCACGCTTGTATGGAAGAATAACTAAACCGACAACTGCAC
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
29 CATCATACTTGGGTAAAGACGCGCTTTATCGTGGATTGACCAAGTGTGGTGTTCGCACAG
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
30 TTAATATTCAACCAGAATACATAGACGCAGCGGCGAATGACGTCGCACGCTATGTGTTAA
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
31 ACCAGCATGTTGGTCACGTGGATAGGGAACGATACACACGTATATTGTCGTACGAGGAGG
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
32 CTGTTAAGGGCGTGCCGTACGATGATTTCATGAAGTCAGTGACTCGAGTCACTTCCCCTG
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
33 GTTACCCCTATTGCTTGGATACTGGAAACATGCCAGGGAAAAGCAAATGGATGGGGCTCG
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
34 AACAAGATTTCGATATGACAAGTCCAGCTGCTTTGGCTTTGAGGAAAGATGTTGAAAGTT
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
35 TGTTGGAAGATTGCAAAAATGGCTTAGTCCGTGATGTGGTGTTTGTCGACACTCTCAAGG
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
36 ATGAAAGGCGCGAGCTGATAAAGGTGGAAGCAAAGAAGACTCGAGTCTTTTCTGCTGGAC
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
37 CACAGCATTTTGTAATAGCTTTCCGGCAATACTTTCTTCCATTCTCTGCCTGGGTCATGC
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
38 ATAACAGAATCGAAAACGAAGTAGCCGTTGGAACAAACCCCTTCTCAATGGATTGGCACA
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
39 ACATTGCTGTGCGTATGCGTAGTAAAGGGAGACACATTATTGCTGGAGATTTTAGCAATT
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
40 TTGATGGATCCCTCAACGCCCAAGTTCTCTGGACAATATTTTGGAAGATATTTGTCCCGT
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
41 GGCTTAATGATATTGAACCACTTGGTACACCCAAGAATGAGGAGAATCTGCGGGTCTGCA
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
42 CGAGTCTATGGACGCACTTGGTGCACTCCGTGCACATTTGTGGAGATAACTTGTACATGT
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
43 GGACACATTCTCAACCATCGGGCAATCCCTTCACGGTGATAATCAATAGTTTGTATAACT
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
44 CAGTTATCATGCGTGTCGTGTGGCAATACATAATGGCGAAAGAAGAACCTAAGTTACGCA
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
45 CAATGAACCATTTCAATCAACATGTTGCTATGGTTTCATATGGTGATGACAATCTACTTA
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
46 ACATCTCGGAAGGGGTAATTGATATCTTCAACCAACTTACCATCTCGGAAGCCATGCGTT
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
47 GGATAGGACACGAATACACAGATGAAACGAAAACAGGCGAGGCTGCGCCCTATCGGACAT
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
48 TGGAAGAAGTCCGTTTCCTTAAAAGAGGGTTCAGAATGGATCACCTCTTGTGTCGGTGGG
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
49 TAGCTCCTTTGAAGAAGGATGTCATCTACGAAATGCTTAATTGGACGCGCAAAGGGATTA
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
50 ACCCAGATGATGTGACGATGATGATCATTGATACAGCATTTAGGGAGATCTCTTATCACG
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
51 GAAGGGAAGCTTTCGAGAAGCTGCGAGGGCAGATACTTGAGCAGCGGGATGTGTTGGTTG
9516d0cec35b planemo upload for repository https://bitbucket.org/drosofff/gedtools/
drosofff
parents:
diff changeset
52 AATATCCTCAA