Mercurial > repos > drosofff > blastn_to_scaffold
diff blastn_to_scaffold.py @ 1:ef007adcbbf8 draft default tip
planemo upload for repository https://bitbucket.org/drosofff/gedtools/
author | drosofff |
---|---|
date | Sat, 20 Jun 2015 07:55:35 -0400 |
parents | 7b4212122a49 |
children |
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--- a/blastn_to_scaffold.py Fri Jun 12 12:27:30 2015 -0400 +++ b/blastn_to_scaffold.py Sat Jun 20 07:55:35 2015 -0400 @@ -91,7 +91,10 @@ orientation = "direct" sequence = getseq (ContigsDict, seqHeader, queryStart, queryStop, orientation) for i in range(subjectStart, subjectStop+1): - del GuideDict[i] + try: + del GuideDict[i] + except KeyError: + continue for i, nucleotide in enumerate(sequence): GuideDict[i+subjectStart] = nucleotide