# HG changeset patch
# User dfornika
# Date 1578092121 0
# Node ID 64a6ab94b98e2177b9af02b9069c53828057c5b9
# Parent  7917619d2c91b8def19921a30ba9f91f3c0e755e
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tetyper commit 65f9e423263afc8f23fa51cb4770998b99f933ba-dirty"

diff -r 7917619d2c91 -r 64a6ab94b98e tetyper.xml
--- a/tetyper.xml	Fri Jan 03 21:58:20 2020 +0000
+++ b/tetyper.xml	Fri Jan 03 22:55:21 2020 +0000
@@ -21,11 +21,21 @@
             --min_each_strand '${min_each_strand}'
             --min_mapped_len '${min_mapped_len}'
             --min_qual '${min_qual}'
-            #if $snp_profiles_source.snp_profiles
-              --snp_profiles '${snp_profiles_source.snp_profiles}'
+            #if str( $snp_profiles_source.snp_profiles_source_selector ) == "tool_data_table":
+              #set $snp_profiles = str( $snp_profiles_source.snp_profiles.fields.path )
+            #else:
+              #set $snp_profiles = str( $snp_profiles_source.snp_profiles )
+            #end if
+            #if $snp_profiles
+              --snp_profiles '${snp_profiles}'
             #end if
-            #if $struct_profiles_source.struct_profiles
-              --struct_profiles '${struct_profiles_source.struct_profiles}'
+            #if str( $struct_profiles_source.struct_profiles_source_selector ) == "tool_data_table":
+              #set $struct_profiles = str( $struct_profiles_source.struct_profiles.fields.path )
+            #else:
+              #set $struct_profiles = str( $struct_profiles_source.snp_profiles )
+            #end if
+            #if $struct_profiles
+              --struct_profiles '${struct_profiles}'
             #end if
             --outprefix output
         ]]>