comparison snippy_core_wrapper.py @ 13:c92d935dc8ab draft

planemo upload for repository https://github.com/tseemann/snippy commit 93b22331ca83a82fdfbe8f2b274577e21f9bf025-dirty
author dfornika
date Mon, 21 Jan 2019 19:58:51 -0500
parents a2f07b210776
children bf6dbc4d4957
comparison
equal deleted inserted replaced
12:a2f07b210776 13:c92d935dc8ab
30 for indir in args.indirs.split(','): 30 for indir in args.indirs.split(','):
31 base_name = os.path.basename(indir) 31 base_name = os.path.basename(indir)
32 copyfile(indir, base_name) 32 copyfile(indir, base_name)
33 subprocess.Popen(['tar', '-xf', base_name]) 33 subprocess.Popen(['tar', '-xf', base_name])
34 34
35 extracted_dirs = [f.path for f in os.listdir('.') if os.path.isdir(f) ] 35 extracted_dirs = [f for f in os.listdir('.') if os.path.isdir(f) ]
36 36
37 for extracted_dir in extracted_dirs: 37 for extracted_dir in extracted_dirs:
38 snippy_core_command_line.append(extracted_dir) 38 snippy_core_command_line.append(extracted_dir)
39 39
40 subprocess.Popen(snippy_core_command_line) 40 subprocess.Popen(snippy_core_command_line)