Mercurial > repos > dfornika > snippy
comparison test-data/reference.gbk @ 20:3bbfe41787af draft
planemo upload commit bf653fc1bf39312caf070843fbde7b2570330917-dirty
| author | dfornika |
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| date | Fri, 08 Mar 2019 20:46:56 -0500 |
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| children |
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| 19:8a6b951f6ec2 | 20:3bbfe41787af |
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| 1 LOCUS reference 700 bp DNA linear 06-FEB-2019 | |
| 2 DEFINITION Listeria monocytogenes strain strain. | |
| 3 ACCESSION | |
| 4 VERSION | |
| 5 KEYWORDS . | |
| 6 SOURCE Listeria monocytogenes | |
| 7 ORGANISM Listeria monocytogenes | |
| 8 Unclassified. | |
| 9 COMMENT Annotated using prokka 1.13.3 from | |
| 10 https://github.com/tseemann/prokka. | |
| 11 FEATURES Location/Qualifiers | |
| 12 source 1..700 | |
| 13 /organism="Listeria monocytogenes" | |
| 14 /mol_type="genomic DNA" | |
| 15 /strain="strain" | |
| 16 CDS 188..658 | |
| 17 /locus_tag="KPFNHDNB_00001" | |
| 18 /inference="ab initio prediction:Prodigal:2.6" | |
| 19 /codon_start=1 | |
| 20 /transl_table=11 | |
| 21 /product="hypothetical protein" | |
| 22 /translation="MIFQRLLKTRDTEFYRVIQNRNIDDVFGYLLIHDKREPAEIDDF | |
| 23 KVFAKSNINKEAFSVNIKKNHIYTMFFHFTDLEEEQEIPKFTKVIRFIEGLLSFQPET | |
| 24 SHYVDNYLIKEKLIFEYPAEFEKIGEFAKYLVKLSGRKITIPDTTREKYIYLTQ" | |
| 25 ORIGIN | |
| 26 1 tccacaagcc attgtgtgta attaaccact aattgtgtat aagtttaaac taattgaaaa | |
| 27 61 ggttatccac aataaaaagg cgttattcag gagttatcca cactttctag gaaaggattt | |
| 28 121 cattgcgcca atgtgttaaa ctatttaccg aatacgaaaa aaagacaaat aaatgaggtt | |
| 29 181 gtgaaaaatg atatttcaac ggcttttgaa aactagagat acagagtttt atcgagttat | |
| 30 241 acaaaacagg aatattgacg acgtatttgg atacttatta attcacgata aacgggaacc | |
| 31 301 agcagaaatt gacgatttta aggtatttgc aaaaagtaat ataaataaag aagctttttc | |
| 32 361 agtgaatatc aaaaaaaatc atatttacac gatgtttttc cactttactg atttagagga | |
| 33 421 agaacaggaa attccaaaat ttactaaagt tattcgtttt atagaaggac ttttatcttt | |
| 34 481 tcagccagaa acaagccatt acgttgataa ctatttaata aaggaaaaac taatttttga | |
| 35 541 atatcctgct gaatttgaga aaatcgggga gtttgctaaa tatttagtaa agctttcggg | |
| 36 601 tcgtaaaatt actattccag acacaacgag agaaaaatat atctatttaa cgcaataatt | |
| 37 661 ttcgaaaaat ggtttttctc tctataaaaa tatgatatga | |
| 38 // |