Mercurial > repos > dfornika > screen_abricate_results

comparison screen_abricate_results.xml @ 4:f06ea4673b49 draft default tip

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planemo upload for repository https://github.com/dfornika/galaxy/tree/master/tools/screen_abricate_results commit 607fa944c574740d29ea3ce948707b8bd17c7d58-dirty
author dfornika
date Thu, 26 Sep 2019 19:18:44 -0400
parents 03e8644e3fd7
children
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3:03e8644e3fd7 4:f06ea4673b49
3 <requirements> 3 <requirements>
4 </requirements> 4 </requirements>
5 <command detect_errors="exit_code"><![CDATA[ 5 <command detect_errors="exit_code"><![CDATA[
6 '${__tool_directory__}/screen_abricate_results.py' 6 '${__tool_directory__}/screen_abricate_results.py'
7 '${abricate_report}' 7 '${abricate_report}'
8 --screen '${screening_file}' 8 --screen '${screening_file.fields.path}'
9 > '${output}' 9 > '${output}'
10 ]]></command> 10 ]]></command>
11 <inputs> 11 <inputs>
12 <param name="abricate_report" type="data" format="tabular" /> 12 <param name="abricate_report" type="data" format="tabular" />
13 <param name="screening_file" type="select" format="tabular"> 13 <param name="screening_file" type="select" format="tabular">