# HG changeset patch
# User dfornika
# Date 1575069023 0
# Node ID 8c604b5b286c0bd3f9816192f50b765e6cb5d7ad
# Parent  b46209a9771c782843721c79bb341485a486247c
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ncbi_acc_download commit 92e900f2e63812885018aeaede2e67fbb5fcdddc-dirty"

diff -r b46209a9771c -r 8c604b5b286c ncbi_acc_download.xml
--- a/ncbi_acc_download.xml	Fri Nov 29 23:06:37 2019 +0000
+++ b/ncbi_acc_download.xml	Fri Nov 29 23:10:23 2019 +0000
@@ -14,7 +14,7 @@
         #end if
         mkdir outdir &&
         cd outdir &&
-        for accession in \$(cat accessions); do
+        for accession in \$(cat ../accessions); do
         sleep 2 &&
         echo "Downloading accession number: " \$accession &&
         ncbi-acc-download
@@ -23,7 +23,7 @@
             #if $molecule.format != 'featuretable' and $molecule.format != 'gff3':
                 --extended-validation all
             #end if
-            \${accession}
+            \${accession};
         done 2> >(tee -a ../error.log >&2)
     ]]></command>
     <inputs>