# HG changeset patch
# User dfornika
# Date 1572992267 18000
# Node ID 84cf5ed52f58d3a4432cbb5629fa5465a0f6d654
# Parent  98a686bf8d1c9a7bb853b503cddce7eb342d90b1
"planemo upload for repository https://github.com/phac-nml/mob-suite commit dcdac86bce5c44043516fbd472ab7c19d7bf4d50-dirty"

diff -r 98a686bf8d1c -r 84cf5ed52f58 mob_recon.xml
--- a/mob_recon.xml	Tue Nov 05 17:09:40 2019 -0500
+++ b/mob_recon.xml	Tue Nov 05 17:17:47 2019 -0500
@@ -70,8 +70,10 @@
   <outputs>
     <data name="contig_report" format="tabular" from_work_dir="contig_report.txt" label="${tool.name} on ${on_string}: Overall contig MOB-recon report"/> 
     <data name="repetitive_blast_report" format="tabular" from_work_dir="repetitive_blast_report.txt" label="${tool.name} on ${on_string}: Repetitive elements BLAST report"/>
-    <data name="chromosome" type="data" format="fasta" from_work_dir="chromosome.fasta" label="${tool.name} on ${on_string}: chromosome"/>
-    <data name="plasmids" type="data" format="fasta" from_work_dir="plasmids" label="${tool.name} on ${on_string}: plasmids"/>
+    <data name="chromosome" type="data" format="fasta" from_work_dir="chromosome.fasta" label="${tool.name} on ${on_string}: Chromosome"/>
+    <collection name="plasmids" type="list" label="${tool.name} on ${on_string}: Plasmids">
+        <discover_datasets pattern="__name_and_ext__" directory="plasmids" />
+    </collection>
   </outputs>
   <tests>
     <test>