# HG changeset patch
# User dfornika
# Date 1569010773 14400
# Node ID 9860e4ad1401d21b9ebcc1af91de5caa68798409
# Parent  ddae1e5b4bb24a6e2d2c938215cba8c18a1dc2fd
planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/tools/micall-lite commit c8241b460c9def5b434fa4350924599b09b17a69-dirty

diff -r ddae1e5b4bb2 -r 9860e4ad1401 micall-lite.xml
--- a/micall-lite.xml	Fri Sep 20 15:59:42 2019 -0400
+++ b/micall-lite.xml	Fri Sep 20 16:19:33 2019 -0400
@@ -6,7 +6,7 @@
     <requirements>
         <requirement type="package" version="@TOOL_VERSION@">micall-lite</requirement>
     </requirements>
-    <version_command>micall --version</version_command>
+    <version_command>echo "@TOOL_VERSION@"</version_command>
     <command detect_errors="exit_code">
         <![CDATA[
           ln -s '${input_pair.forward}' '${input_pair.element_identifier}_R1.fastq.gz' &&
@@ -20,7 +20,11 @@
         <param format="fastq,fastq.gz" name="input_pair" type="data_collection" collection_type="paired" label="Collection of paired reads" help="FASTQ datasets" />
     </inputs>
     <outputs>
-        <data name="conseq" format="tabular" ext="conseq.csv" />
+      <data name="align" format="tabular" ext="align.csv" />
+      <data name="amino" format="tabular" ext="amino.csv" />
+      <data name="conseq" format="tabular" ext="conseq.csv" />
+      <data name="insert" format="tabular" ext="insert.csv" />
+      <data name="nuc" format="tabular" ext="nuc.csv" />
     </outputs>
     <tests>
         <test>