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comparison tools/mentalist_call/mentalist_call.xml @ 39:3ffa209e1668 draft

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planemo upload for repository https://github.com/WGS-TB/MentaLiST/tree/master/galaxy commit 79b9f36868b2aaf72661abd09b96a3ad582b8918-dirty
author dfornika
date Sat, 24 Mar 2018 22:16:13 -0400
parents fd7788ac4f4a
children 4d60cfce1283
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38:fd7788ac4f4a 39:3ffa209e1668
44 value="6" min="1" max="25" /> 44 value="6" min="1" max="25" />
45 <param name="kmer_threshold" type="integer" label="Kmer threshold" 45 <param name="kmer_threshold" type="integer" label="Kmer threshold"
46 help="Minimum number of times a kmer is seen to be considered present in the sample." 46 help="Minimum number of times a kmer is seen to be considered present in the sample."
47 value="10" min="1" max="25" /> 47 value="10" min="1" max="25" />
48 <param name="output_votes" type="boolean" label="Output votes" 48 <param name="output_votes" type="boolean" label="Output votes"
49 argument="--output_votes" truevalue="--output_votes" falsevalue="" 49 argument="--output_votes" truevalue="--output_votes" falsevalue=""
50 help="Outputs the results for the original voting algorithm" /> 50 help="Outputs the results for the original voting algorithm" />
51 <param name="output_special" type="boolean" label="Output special" 51 <param name="output_special" type="boolean" label="Output special"
52 argument="--output_special" truevalue="--output_special" falsevalue="" 52 argument="--output_special" truevalue="--output_special" falsevalue=""
53 help="Outputs a fasta file with the alleles from special cases such as incomplete coverage, novel and multiple alleles." /> 53 help="Outputs a fasta file with the alleles from special cases such as incomplete coverage, novel and multiple alleles." />
54 54
55 </inputs> 55 </inputs>