Mercurial > repos > dfornika > mentalist

comparison data_managers/data_manager_conf.xml @ 20:3738f0bc436b draft

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planemo upload for repository https://github.com/WGS-TB/MentaLiST/tree/master/galaxy commit 7e8b159e34b91cb5e76ba86feaea24158565606b-dirty
author dfornika
date Wed, 11 Oct 2017 20:15:41 -0400
parents 2c384f9d9a83
children d151478ebf97
comparison
equal deleted inserted replaced
19:9a90295d0dfb 20:3738f0bc436b
5 <output> 5 <output>
6 <column name="value" /> 6 <column name="value" />
7 <column name="name" /> 7 <column name="name" />
8 <column name="path" output_ref="out_file"> 8 <column name="path" output_ref="out_file">
9 <move type="directory" relativize_symlinks="True"> 9 <move type="directory" relativize_symlinks="True">
10 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">mentalist_databases/${path}</target> 10 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">mentalist_databases/${value}</target>
11 </move> 11 </move>
12 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/mentalist_databases/${path}</value_translation> 12 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/mentalist_databases/${value}</value_translation>
13 <value_translation type="function">abspath</value_translation> 13 <value_translation type="function">abspath</value_translation>
14 </column> 14 </column>
15 </output> 15 </output>
16 </data_table> 16 </data_table>
17 </data_manager> 17 </data_manager>
20 <output> 20 <output>
21 <column name="value" /> 21 <column name="value" />
22 <column name="name" /> 22 <column name="name" />
23 <column name="path" output_ref="out_file"> 23 <column name="path" output_ref="out_file">
24 <move type="directory" relativize_symlinks="True"> 24 <move type="directory" relativize_symlinks="True">
25 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">mentalist_databases/${path}</target> 25 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">mentalist_databases/${value}</target>
26 </move> 26 </move>
27 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/mentalist_databases/${path}</value_translation> 27 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/mentalist_databases/${value}</value_translation>
28 <value_translation type="function">abspath</value_translation> 28 <value_translation type="function">abspath</value_translation>
29 </column> 29 </column>
30 </output> 30 </output>
31 </data_table> 31 </data_table>
32 </data_manager> 32 </data_manager>
36 <column name="value" /> 36 <column name="value" />
37 <column name="name" /> 37 <column name="name" />
38 <column name="dbkey" /> 38 <column name="dbkey" />
39 <column name="path" output_ref="out_file"> 39 <column name="path" output_ref="out_file">
40 <move type="directory" relativize_symlinks="True"> 40 <move type="directory" relativize_symlinks="True">
41 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">mentalist_databases/${path}</target> 41 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">mentalist_databases/${value}</target>
42 </move> 42 </move>
43 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/mentalist_databases/${path}</value_translation> 43 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/mentalist_databases/${value}</value_translation>
44 <value_translation type="function">abspath</value_translation> 44 <value_translation type="function">abspath</value_translation>
45 </column> 45 </column>
46 </output> 46 </output>
47 </data_table> 47 </data_table>
48 </data_manager> 48 </data_manager>