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comparison mash_screen.xml @ 11:d85f64b694ca draft

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planemo upload for repository https://github.com/dfornika/galaxy/tree/master/tools/mash commit 423cf96266f6ac433052ff72edb1397502313010-dirty
author dfornika
date Thu, 25 Jul 2019 15:50:37 -0400
parents 5918212ec576
children 8f70b0652cff
comparison
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10:5918212ec576 11:d85f64b694ca
8 </requirements> 8 </requirements>
9 <version_command>mash --version</version_command> 9 <version_command>mash --version</version_command>
10 <command detect_errors="exit_code"><![CDATA[ 10 <command detect_errors="exit_code"><![CDATA[
11 ln -s '${queries.fields.path}/sketch.msh' queries.msh && 11 ln -s '${queries.fields.path}/sketch.msh' queries.msh &&
12 mash screen 12 mash screen
13 -p \${GALAXY_SLOTS:-4}
13 $winner_takes_all 14 $winner_takes_all
14 -i $minimum_identity_to_report 15 -i $minimum_identity_to_report
15 -v $maximum_p_value_to_report 16 -v $maximum_p_value_to_report
16 queries.msh 17 queries.msh
17 #if str( $pool_input.pool_input_selector ) == "paired" 18 #if str( $pool_input.pool_input_selector ) == "paired"