Mercurial > repos > dfornika > kraken2

changeset 1:93157a449e33 draft

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planemo upload for repository https://github.com/dfornika/galaxytools/blob/master/tools/kraken2 commit f05f93ee024df8b38efa1c92db9785d52c726f85-dirty
author dfornika
date Mon, 04 Mar 2019 14:00:46 -0500
parents fcf7b83de500
children 82ccc25387ea
files macros.xml
diffstat 1 files changed, 0 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/macros.xml	Fri Mar 01 12:41:14 2019 -0500
+++ b/macros.xml	Mon Mar 04 14:00:46 2019 -0500
@@ -10,6 +10,4 @@
             </options>
         </param>
     </xml>
-    <token name="@SET_DATABASE_PATH@">if [ -d '${kraken2_database.fields.path}/${kraken2_database.fields.name}' ]; then export KRAKEN2_DEFAULT_DB='${kraken2_database.fields.path}/${kraken2_database.fields.name}'; else export KRAKEN2_DEFAULT_DB='${kraken_database.fields.path}'; fi</token>
-    <token name="@INPUT_DATABASE@">--db "\$KRAKEN2_DEFAULT_DB"</token>
 </macros>