Mercurial > repos > dfornika > get_primer_scheme_bedfiles
comparison get_primer_scheme_bedfiles.xml @ 2:f546658a63f0 draft default tip
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/blob/master/tools/get_primer_scheme_bedfiles commit 1b705021d1f27450005e358c0c1cb9283b9f56f8-dirty"
| author | dfornika |
|---|---|
| date | Wed, 18 Mar 2020 01:26:16 +0000 |
| parents | 871314e98eb7 |
| children |
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| 1:871314e98eb7 | 2:f546658a63f0 |
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| 1 <tool id="get_primer_scheme_bedfiles" name="Get Primer Scheme .bed Files" version="0.1.0+galaxy0"> | 1 <tool id="get_primer_scheme_bedfiles" name="Get Primer Scheme .bed Files" version="0.1.0+galaxy0"> |
| 2 <description>Get Primer Scheme .bed File from primer_scheme_bedfiles tool data table</description> | 2 <description>Get Primer Scheme .bed File from primer_scheme_bedfiles tool data table</description> |
| 3 <requirements> | 3 <requirements> |
| 4 </requirements> | 4 </requirements> |
| 5 <command detect_errors="exit_code"><![CDATA[ | 5 <command detect_errors="exit_code"><![CDATA[ |
| 6 cp '${primer_scheme_bedfile.fields.path}' primer_scheme.bed | 6 cp '${input_primer_scheme_bedfile.fields.path}' '${output_primer_scheme_bedfile}' |
| 7 ]]></command> | 7 ]]></command> |
| 8 <inputs> | 8 <inputs> |
| 9 <param name="primer_scheme_bedfile" type="select" format="bed" label="Primer Scheme"> | 9 <param name="input_primer_scheme_bedfile" type="select" format="bed" label="Primer Scheme"> |
| 10 <options from_data_table="primer_scheme_bedfiles"> | 10 <options from_data_table="primer_scheme_bedfiles"> |
| 11 <validator type="no_options" message="No primer scheme .bed files are available" /> | 11 <validator type="no_options" message="No primer scheme .bed files are available" /> |
| 12 </options> | 12 </options> |
| 13 </param> | 13 </param> |
| 14 </inputs> | 14 </inputs> |
| 15 <outputs> | 15 <outputs> |
| 16 <data name="primer_scheme_bedfile" format="bed" from_workdir="primer_scheme.bed" label="Primer Scheme" /> | 16 <data name="output_primer_scheme_bedfile" format="bed" label="Primer Scheme" /> |
| 17 </outputs> | 17 </outputs> |
| 18 <tests> | 18 <tests> |
| 19 </tests> | 19 </tests> |
| 20 <help><![CDATA[ | 20 <help><![CDATA[ |
| 21 ]]></help> | 21 ]]></help> |