# HG changeset patch # User dfornika # Date 1551335248 18000 # Node ID 6736d495130ee4e7d8c09876f18559922bdb4894 # Parent 7cea257d1e7760c00fd40444801c97c119dda1e5 planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_kraken2_database/ commit 682a16af9bce01ff23176dbce291034d67947e58-dirty diff -r 7cea257d1e77 -r 6736d495130e data_manager/kraken2_build_standard.py --- a/data_manager/kraken2_build_standard.py Thu Feb 28 01:24:15 2019 -0500 +++ b/data_manager/kraken2_build_standard.py Thu Feb 28 01:27:28 2019 -0500 @@ -5,13 +5,13 @@ import argparse import datetime import errno +import json import os import string import subprocess import sys -from json import dumps, loads - +from pprint import pprint DATA_TABLE_NAME = "kraken2_databases" @@ -58,6 +58,7 @@ args = parser.parse_args() params = json.loads(open(args.params).read()) + pprint(params) target_directory = params['output_data'][0]['extra_files_path'] try: