Mercurial > repos > dfornika > data_manager_build_kma_index

diff data_manager_conf.xml @ 0:5e00d9417f68 draft

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planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_kma_index/ commit d9732cd3279d03dcc498bf2eb903f9e6120a9d85
author dfornika
date Thu, 03 Oct 2019 00:30:29 -0400
parents
children 400865264b96
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/data_manager_conf.xml	Thu Oct 03 00:30:29 2019 -0400
@@ -0,0 +1,18 @@
+<data_managers>
+    <data_manager tool_file="data_manager/kma_build_index.xml" id="kma_build_index" version="0.1.0">
+	<data_table name="kma_index">
+	    <output>
+		<column name="value"/>
+		<column name="name"/>
+		<column name="path" output_ref="out_file">
+		    <move type="directory">
+		        <source>${path}</source>
+			<target base="${GALAXY_DATA_MANAGER_DATA_PATH}">kraken2_databases/${path}</target>
+		    </move>
+                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/kraken2_databases/${path}</value_translation>
+		    <value_translation type="function">abspath</value_translation>
+		</column>
+	    </output>
+	</data_table>
+    </data_manager>
+</data_managers>