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annotate tools/dada2-dereplicate-fastq.R @ 1:763080a4ac3d draft default tip

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planemo upload for repository https://github.com/dfornika/dada2-galaxy commit 7014a3aed7bcff2599e5dd06a468aaa74dababfc
author dfornika
date Wed, 02 May 2018 16:30:53 -0400
parents 44579a4814b7
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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44579a4814b7 planemo upload for repository https://github.com/dfornika/dada2-galaxy commit a2ae309ba8ff0ef18a1e4abbe5d1ef412e4f69a9
dfornika
parents:
diff changeset
1 library("dada2")
44579a4814b7 planemo upload for repository https://github.com/dfornika/dada2-galaxy commit a2ae309ba8ff0ef18a1e4abbe5d1ef412e4f69a9
dfornika
parents:
diff changeset
2
44579a4814b7 planemo upload for repository https://github.com/dfornika/dada2-galaxy commit a2ae309ba8ff0ef18a1e4abbe5d1ef412e4f69a9
dfornika
parents:
diff changeset
3 derepFastq(
44579a4814b7 planemo upload for repository https://github.com/dfornika/dada2-galaxy commit a2ae309ba8ff0ef18a1e4abbe5d1ef412e4f69a9
dfornika
parents:
diff changeset
4 filtFs,
44579a4814b7 planemo upload for repository https://github.com/dfornika/dada2-galaxy commit a2ae309ba8ff0ef18a1e4abbe5d1ef412e4f69a9
dfornika
parents:
diff changeset
5 multithread=TRUE
44579a4814b7 planemo upload for repository https://github.com/dfornika/dada2-galaxy commit a2ae309ba8ff0ef18a1e4abbe5d1ef412e4f69a9
dfornika
parents:
diff changeset
6 )