Mercurial > repos > dfornika > any2fasta

diff any2fasta.xml @ 0:0cc78566a41e draft default tip

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planemo upload for repository https://github.com/dfornika/galaxy/tree/master/tools/any2fasta commit 423cf96266f6ac433052ff72edb1397502313010-dirty
author dfornika
date Tue, 09 Jul 2019 17:13:59 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/any2fasta.xml	Tue Jul 09 17:13:59 2019 -0400
@@ -0,0 +1,32 @@
+<tool id="any2fasta" name="any2fasta" version="0.4.2+galaxy0">
+    <description>Convert various sequence formats to FASTA</description>
+    <macros>
+        <import>macros.xml</import>
+    </macros>
+    <requirements>
+        <requirement type="package" version="0.4.2">any2fasta</requirement>
+    </requirements>   
+    <command detect_errors="exit_code">
+        <![CDATA[  
+          any2fasta
+            '${input}'
+            > '${output}'
+        ]]>  
+    </command>
+    <inputs>
+        <param name="input" type="data" format="@INTYPES@" label="Input" help="File to convert to fasta"/>
+    </inputs>
+    <outputs>
+        <data name="output" format="fasta"/> 
+    </outputs>
+    <tests>
+        <test>
+            <param name="input" value="LR595890.1.gb" ftype="genbank"/>
+            <output name="output" file="LR595890.1.fasta" />
+        </test>
+    </tests>
+    <help>
+    </help>
+    <citations>
+    </citations>
+</tool>