Mercurial > repos > devteam > vcffixup
diff test-data/vcffixup-test1.vcf @ 1:7951d68a5de5 draft
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcffixup commit 0b9b6512272b82637c2f1e831367e89aed77ae79
author | devteam |
---|---|
date | Thu, 15 Sep 2016 16:03:55 -0400 |
parents | d9ead2da3182 |
children |
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--- a/test-data/vcffixup-test1.vcf Mon Nov 09 12:31:56 2015 -0500 +++ b/test-data/vcffixup-test1.vcf Thu Sep 15 16:03:55 2016 -0400 @@ -27,5 +27,5 @@ 20 1110696 rs6040355 A G,T 67 PASS AA=T;AC=2,4;AF=0.333333,0.666667;AN=6;DP=10;NS=3;DB GT:GQ:DP:HQ 1|2:21:6:23,27 2|1:2:0:18,2 2/2:35:4:.,. 20 1230237 . T . 47 PASS AA=T;AC=0;AF=0;AN=6;DP=13;NS=3 GT:GQ:DP:HQ 0|0:54:.:56,60 0|0:48:4:51,51 0/0:61:2:.,. 20 1234567 microsat1 G GA,GAC 50 PASS AA=G;AC=3,1;AF=0.5,0.166667;AN=6;DP=9;NS=3 GT:GQ:DP 0/1:.:4 0/2:17:2 1/1:40:3 -20 1235237 . T . 0 . AC=0;AF=0;AN=4;NS=2 GT 0/0 0|0 . +20 1235237 . T . 0 . AC=0;AF=0;AN=4;NS=3 GT 0/0 0|0 ./. X 10 rsTest AC A,ATG 10 PASS AC=1,1;AF=0.2,0.2;AN=5;NS=3 GT 0 0/1 0|2