Mercurial > repos > devteam > vcf_intersect
comparison test-data/2.vcf @ 0:f5d5eed73180 draft default tip
Imported from capsule None
| author | devteam |
|---|---|
| date | Thu, 23 Jan 2014 12:31:34 -0500 |
| parents | |
| children |
comparison
equal
deleted
inserted
replaced
| -1:000000000000 | 0:f5d5eed73180 |
|---|---|
| 1 ##fileformat=VCFv4.0 | |
| 2 #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT chr10 chr11 | |
| 3 chr10 116915 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4 chr10 131335 . CC CCGC 12.7 . INDEL;DP=4;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5 chr10 131337 . A G 27.5 . DP=4;AF1=0.5718;CI95=0.5,1;DP4=1,0,0,3;MQ=48;PV4=0.25,1,0.19,1 PL:DP:SP:GT:GQ 57,0,6:4:0:0/1:8 | |
| 6 chr10 160252 . t tGCA 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 7 chr10 178777 . A T 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 8 chr10 185489 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9 chr10 207781 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10 chr10 241238 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11 chr10 247859 . C CGT 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 12 chr10 255907 . T G 12.3 . DP=41;AF1=0.5;CI95=0.5,0.5;DP4=12,4,0,6;MQ=49;PV4=0.0028,8.2e-05,8.2e-05,0.072 PL:DP:SP:GT:GQ 42,0,255:22:26:0/1:45 | |
| 13 chr10 258846 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14 chr10 282897 . C T 54.6 . DP=20;AF1=0.5939;CI95=0.5,1;DP4=0,1,1,13;MQ=49;PV4=1,8.1e-07,0.33,1 PL:DP:SP:GT:GQ 84,0,5:15:0:0/1:7 | |
| 15 chr10 285477 . TTGT TTGTGT 65 . INDEL;DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=50 PL:DP:SP:GT:GQ 105,12,0:4:0:1/1:72 | |
| 16 chr10 286803 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 17 chr10 287581 . GCT GCTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18 chr10 292927 . C A 10.2 . DP=11;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=45 PL:DP:SP:GT:GQ 41,6,0:2:0:1/1:49 | |
| 19 chr10 294953 . A G 17.1 . DP=19;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=49 PL:DP:SP:GT:GQ 49,9,0:3:0:1/1:63 | |
| 20 chr10 295146 . GT GTCGCT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 21 chr10 305117 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22 chr10 305449 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 23 chr10 317779 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 24 chr10 318545 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 25 chr10 328902 . A T 26 . DP=4;AF1=0.5;CI95=0.5,0.5;DP4=1,1,1,1;MQ=45;PV4=1,0.036,0.1,1 PL:DP:SP:GT:GQ 56,0,88:4:0:0/1:59 | |
| 26 chr10 329425 . T C 22 . DP=25;AF1=0.5001;CI95=0.5,0.5;DP4=0,3,0,7;MQ=48;PV4=1,0.11,0.072,1 PL:DP:SP:GT:GQ 52,0,35:10:0:0/1:38 | |
| 27 chr10 350914 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 28 chr10 350966 . CATATAT CATAT 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 29 chr10 355786 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 30 chr10 371924 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 31 chr10 373048 . T C 43 . DP=38;AF1=0.5;CI95=0.5,0.5;DP4=11,8,7,4;MQ=50;PV4=1,8.8e-13,0.055,1 PL:DP:SP:GT:GQ 73,0,255:30:0:0/1:76 | |
| 32 chr10 379496 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 33 chr10 382335 . c cTGTTGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 34 chr10 395463 . G A 66 . DP=32;AF1=1;CI95=1,1;DP4=0,0,0,27;MQ=49 PL:DP:SP:GT:GQ 99,81,0:27:0:1/1:99 | |
| 35 chr10 397023 . G T 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,41:2:0:0/1:33 | |
| 36 chr10 399121 . AACACA AACA 48.2 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=50 PL:DP:SP:GT:GQ 87,6,0:2:0:1/1:49 | |
| 37 chr10 430502 . C G 22 . DP=34;AF1=0.5;CI95=0.5,0.5;DP4=3,12,7,0;MQ=48;PV4=0.0007,0.022,0.0017,1 PL:DP:SP:GT:GQ 52,0,234:22:32:0/1:55 | |
| 38 chr10 430707 . T TTAGGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 39 chr10 435102 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 40 chr10 438682 . acactcac acac 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 41 chr10 445061 . C T 99 . DP=26;AF1=1;CI95=1,1;DP4=1,0,20,3;MQ=48;PV4=1,0.45,0.16,1 PL:DP:SP:GT:GQ 195,46,0:24:0:1/1:99 | |
| 42 chr10 455249 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 43 chr10 459940 . G A 24 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=48 PL:DP:SP:GT:GQ 56,9,0:3:0:1/1:63 | |
| 44 chr10 465538 . T A 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 45 chr10 468849 . CGTGG C 5.08 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=1,1,1,0;MQ=50;PV4=1,0.48,1,0.33 PL:DP:SP:GT:GQ 41,0,73:3:0:0/1:44 | |
| 46 chr10 492483 . T C 9.31 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 47 chr10 503689 . tctgact tct 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 48 chr10 517192 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 49 chr10 518547 . ACTCT ACT 99 . INDEL;DP=22;AF1=0.5;CI95=0.5,0.5;DP4=1,9,0,10;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 199,0,213:20:0:0/1:99 | |
| 50 chr10 532567 . TG TGCG 7.35 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 51 chr10 544383 . C T 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 52 chr10 544868 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 53 chr10 547567 . A G 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 54 chr10 552166 . A ATC 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 55 chr10 563089 . G T 4.77 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 56 chr10 577475 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 57 chr10 586420 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 58 chr10 602617 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 59 chr10 618593 . A C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 60 chr10 620357 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 61 chr10 623887 . T TACGCCGTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 62 chr10 625278 . g gAGCAGAGAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 63 chr10 641778 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 64 chr10 643458 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 65 chr10 646119 . ATTT AT 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 66 chr10 651635 . C G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 67 chr10 661874 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 68 chr10 663858 . CTTT CT 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 69 chr10 667473 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 70 chr10 680428 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 71 chr10 692112 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 72 chr10 692298 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 73 chr10 707732 . CCT C 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 74 chr10 729762 . A C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 75 chr10 732745 . A ATCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 76 chr10 739545 . G C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 77 chr10 741915 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 78 chr10 746395 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 79 chr10 746562 . agtgtg agtg 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=48 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 80 chr10 747810 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 81 chr10 761800 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 82 chr10 772190 . G T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 83 chr10 775308 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 84 chr10 779545 . G GGTCGAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 85 chr10 809439 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 86 chr10 818851 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 87 chr10 822491 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 88 chr10 822675 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 89 chr10 836083 . C CGGCA 7.35 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 90 chr10 836743 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 91 chr10 856097 . G GGGTTTCAGGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 92 chr10 864369 . C A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 93 chr10 873857 . GGA G 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 94 chr10 887947 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 95 chr10 895170 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 96 chr10 901400 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 97 chr10 903600 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 98 chr10 910249 . TCA TCACAACA 5.08 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,1,1,0.36 PL:DP:SP:GT:GQ 41,0,43:3:0:0/1:42 | |
| 99 chr10 925565 . g gACGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 100 chr10 927933 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 101 chr10 937627 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 102 chr10 947878 . CTA C 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 103 chr10 979753 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 104 chr10 985132 . GCC G 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 105 chr10 997765 . T G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 106 chr10 1009786 . G T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 107 chr10 1010029 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 108 chr10 1012704 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 109 chr10 1017954 . cctctctctctctct cctctctctct 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 110 chr10 1030514 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 111 chr10 1034438 . A C 29 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=2,5,4,1;MQ=50;PV4=0.24,0.081,0.05,0.12 PL:DP:SP:GT:GQ 59,0,138:12:6:0/1:62 | |
| 112 chr10 1035187 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 113 chr10 1050449 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 114 chr10 1052924 . G A 64 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=7,0,12,0;MQ=48;PV4=1,1e-14,0.0017,1 PL:DP:SP:GT:GQ 94,0,172:19:0:0/1:97 | |
| 115 chr10 1052950 . G A 75 . DP=31;AF1=0.5;CI95=0.5,0.5;DP4=19,0,9,1;MQ=48;PV4=0.34,6.4e-06,0.0013,1 PL:DP:SP:GT:GQ 105,0,236:29:0:0/1:99 | |
| 116 chr10 1054995 . G A 73 . DP=23;AF1=0.5;CI95=0.5,0.5;DP4=0,13,0,8;MQ=48;PV4=1,0.001,1.2e-05,1 PL:DP:SP:GT:GQ 103,0,220:21:0:0/1:99 | |
| 117 chr10 1059807 . T TACTGAAGA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 118 chr10 1061862 . A G 9.52 . DP=54;AF1=0.5;CI95=0.5,0.5;DP4=3,13,0,6;MQ=49;PV4=0.53,0.0013,0.013,1 PL:DP:SP:GT:GQ 39,0,255:22:3:0/1:42 | |
| 119 chr10 1063957 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 120 chr10 1065787 . A G 24 . DP=26;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,5;MQ=49;PV4=1,0.19,0.44,1 PL:DP:SP:GT:GQ 54,0,71:9:0:0/1:57 | |
| 121 chr10 1068802 . G A 96.3 . DP=10;AF1=1;CI95=0.5,1;DP4=0,0,1,4;MQ=45 PL:DP:SP:GT:GQ 129,15,0:5:0:1/1:75 | |
| 122 chr10 1085132 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 123 chr10 1116802 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 124 chr10 1118318 . T C 4.13 . DP=16;AF1=0.4998;CI95=0.5,0.5;DP4=0,10,0,4;MQ=46;PV4=1,1.8e-06,0.0029,1 PL:DP:SP:GT:GQ 32,0,210:14:0:0/1:35 | |
| 125 chr10 1126293 . T C 79 . DP=10;AF1=1;CI95=1,1;DP4=0,0,10,0;MQ=48 PL:DP:SP:GT:GQ 112,30,0:10:0:1/1:99 | |
| 126 chr10 1135599 . C T 9.31 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=44 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 127 chr10 1135601 . G A 11.1 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=44 PL:DP:SP:GT:GQ 42,6,0:2:0:1/1:49 | |
| 128 chr10 1142208 . T C 99 . DP=28;AF1=1;CI95=1,1;DP4=0,0,1,25;MQ=49 PL:DP:SP:GT:GQ 153,78,0:26:0:1/1:99 | |
| 129 chr10 1145635 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 130 chr10 1169940 . ATG A 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 131 chr10 1175685 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 132 chr10 1184842 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 133 chr10 1185819 . T A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 134 chr10 1196072 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 135 chr10 1212594 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 136 chr10 1213405 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 137 chr10 1230968 . C T 67.5 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,2,2;MQ=46 PL:DP:SP:GT:GQ 100,12,0:4:0:1/1:72 | |
| 138 chr10 1233237 . AG AGGAGATG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 139 chr10 1237254 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 140 chr10 1239161 . T G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 141 chr10 1246963 . G A 13.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 45,6,0:2:0:1/1:49 | |
| 142 chr10 1249567 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 143 chr10 1250809 . C CTCACG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 144 chr10 1251391 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 145 chr10 1252074 . T G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 146 chr10 1256112 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 147 chr10 1257182 . tc tCGc 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 148 chr10 1262869 . GA G 15.4 . INDEL;DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=50 PL:DP:SP:GT:GQ 54,6,0:2:0:1/1:49 | |
| 149 chr10 1262872 . AGG AG 68.7 . INDEL;DP=8;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=50 PL:DP:SP:GT:GQ 109,15,0:5:0:1/1:75 | |
| 150 chr10 1276512 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 151 chr10 1278538 . atg aTGtg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 152 chr10 1299255 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 153 chr10 1321257 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 154 chr10 1370163 . CA CAAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 155 chr10 1396045 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 156 chr10 1398528 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 157 chr10 1405914 . G A 7.59 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 38,6,0:2:0:1/1:49 | |
| 158 chr10 1414487 . A T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 159 chr10 1418036 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 160 chr10 1420447 . C CTGAG 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,1,1,0.31 PL:DP:SP:GT:GQ 41,0,58:3:0:0/1:44 | |
| 161 chr10 1421326 . C T 99 . DP=45;AF1=0.5;CI95=0.5,0.5;DP4=6,21,3,14;MQ=49;PV4=1,1.3e-13,1e-06,1 PL:DP:SP:GT:GQ 135,0,255:44:0:0/1:99 | |
| 162 chr10 1436858 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 163 chr10 1456903 . c cTGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 164 chr10 1461887 . AATGA AATGATGA 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 165 chr10 1463737 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 166 chr10 1480563 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 167 chr10 1495268 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 168 chr10 1500569 . AG AGG 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 169 chr10 1516521 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 170 chr10 1518005 . CT CTCCGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 171 chr10 1528198 . C CG 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 172 chr10 1529026 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 173 chr10 1529187 . T A 5.29 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=41 PL:DP:SP:GT:GQ 35,6,0:2:0:1/1:49 | |
| 174 chr10 1541103 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 175 chr10 1541219 . tc tCGACGc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 176 chr10 1547153 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 177 chr10 1548255 . G T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 178 chr10 1568184 . A G 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 179 chr10 1569459 . A C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 180 chr10 1573351 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 181 chr10 1589150 . GA GAGAGGTAA 7.35 . INDEL;DP=2;AF1=0.5006;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,26:2:0:0/1:29 | |
| 182 chr10 1590179 . G A 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,41:2:0:0/1:39 | |
| 183 chr10 1594864 . C G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 184 chr10 1612641 . GGGCAGGCA GGGCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 185 chr10 1612860 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 186 chr10 1617240 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 187 chr10 1624305 . G T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 188 chr10 1640491 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 189 chr10 1669426 . T TCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 190 chr10 1679684 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 191 chr10 1713287 . C T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 192 chr10 1721108 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 193 chr10 1735081 . A AGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 194 chr10 1747480 . G GGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 195 chr10 1758805 . G A 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 196 chr10 1767028 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 197 chr10 1784653 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 198 chr10 1794545 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 199 chr10 1795614 . AATCTATCT AATCT 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 200 chr10 1817802 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 201 chr10 1829215 . A T 5.46 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 202 chr10 1863642 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 203 chr10 1880273 . CAT C 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 204 chr10 1884230 . A ACAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 205 chr10 1916315 . G T 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,40:2:0:0/1:35 | |
| 206 chr10 1931026 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 207 chr10 1931037 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 208 chr10 1984662 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 209 chr10 1986113 . T TGCATGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 210 chr10 2018829 . A G 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 211 chr10 2021701 . G T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 212 chr10 2053046 . T TTCAGAGTCGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 213 chr10 2069997 . A C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 214 chr10 2075716 . tt tTCTGAAAAAACt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 215 chr10 2084744 . G A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 216 chr10 2087600 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 217 chr10 2102574 . T TTCACATG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 218 chr10 2108315 . A C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 219 chr10 2119327 . A AAATTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 220 chr10 2126054 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 221 chr10 2130201 . CAGA CA 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 222 chr10 2137079 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 223 chr10 2138552 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 224 chr10 2144548 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 225 chr10 2153432 . T A 13.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=42 PL:DP:SP:GT:GQ 45,6,0:2:0:1/1:49 | |
| 226 chr10 2157621 . CC CCCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 227 chr10 2168316 . gacaaaca gaca 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 228 chr10 2180118 . g gATGAGTT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 229 chr10 2206483 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 230 chr10 2218886 . A AGTCAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 231 chr10 2222733 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 232 chr10 2248985 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 233 chr10 2253020 . A T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 234 chr10 2279584 . T TAGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 235 chr10 2294589 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 236 chr10 2301909 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 237 chr10 2304940 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 238 chr10 2325558 . A G 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 239 chr10 2330312 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 240 chr10 2331297 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 241 chr10 2331493 . ggaatt g 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 242 chr10 2336419 . C T,A 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,1;MQ=45 PL:DP:SP:GT:GQ 46,19,30,16,0,30:2:0:1/1:41 | |
| 243 chr10 2359732 . CG CGAGGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 244 chr10 2367072 . a aCTTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 245 chr10 2371667 . C T 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 246 chr10 2384716 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 247 chr10 2392829 . C CAA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 248 chr10 2394684 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 249 chr10 2415383 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 250 chr10 2419290 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 251 chr10 2434737 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 252 chr10 2481345 . T C 18.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=46 PL:DP:SP:GT:GQ 50,6,0:2:0:1/1:49 | |
| 253 chr10 2494204 . ttc tTCGGAtc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 254 chr10 2499856 . G A 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,37:2:0:0/1:34 | |
| 255 chr10 2514627 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 256 chr10 2515882 . G GCGC 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 257 chr10 2518595 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 258 chr10 2532640 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 259 chr10 2536682 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 260 chr10 2559796 . C G 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 261 chr10 2560715 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 262 chr10 2570016 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 263 chr10 2570698 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 264 chr10 2575143 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 265 chr10 2579500 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 266 chr10 2591948 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 267 chr10 2627333 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 268 chr10 2644885 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 269 chr10 2649119 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 270 chr10 2683181 . at aTGGTTTTCt 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 271 chr10 2695750 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 272 chr10 2713946 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 273 chr10 2742680 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 274 chr10 2750639 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 275 chr10 2755112 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 276 chr10 2761353 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 277 chr10 2778930 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 278 chr10 2791714 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 279 chr10 2794101 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 280 chr10 2796004 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 281 chr10 2797401 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 282 chr10 2802603 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 283 chr10 2802605 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 284 chr10 2820722 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 285 chr10 2829291 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 286 chr10 2842272 . ta tATCa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 287 chr10 2847184 . T A 54.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=43 PL:DP:SP:GT:GQ 86,6,0:2:0:1/1:49 | |
| 288 chr10 2853474 . C A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 289 chr10 2886492 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 290 chr10 2890876 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 291 chr10 2917592 . C A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 292 chr10 2933379 . A AG 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 293 chr10 2936293 . CAT CATAGACACCACAGGAAT 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 294 chr10 2937528 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 295 chr10 2942204 . GG GGCGGAAAAG 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 296 chr10 2974824 . G T 13.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 45,6,0:2:0:1/1:49 | |
| 297 chr10 2976747 . GA GACCACATA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 298 chr10 2977681 . gagaaga gaga 5.08 . INDEL;DP=5;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 299 chr10 2999946 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 300 chr10 3002882 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 301 chr10 3029824 . T G 5.46 . DP=4;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 302 chr10 3041512 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 303 chr10 3044407 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 304 chr10 3054036 . T C 4.61 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 34,6,0:2:0:1/1:49 | |
| 305 chr10 3054914 . G C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 306 chr10 3070587 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 307 chr10 3084943 . A C 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 308 chr10 3085334 . AAA AAATACAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 309 chr10 3088839 . G T 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 310 chr10 3140420 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 311 chr10 3143643 . A C 11.1 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 42,6,0:2:0:1/1:49 | |
| 312 chr10 3145885 . T C 39 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=3,0,5,0;MQ=45;PV4=1,0.0021,0.014,0.48 PL:DP:SP:GT:GQ 69,0,95:8:0:0/1:72 | |
| 313 chr10 3145906 . A C 54 . DP=10;AF1=0.5;CI95=0.5,0.5;DP4=6,0,4,0;MQ=46;PV4=1,0.015,2.1e-06,1 PL:DP:SP:GT:GQ 84,0,164:10:0:0/1:87 | |
| 314 chr10 3147501 . C T 55.5 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,2,2;MQ=46 PL:DP:SP:GT:GQ 88,12,0:4:0:1/1:72 | |
| 315 chr10 3147508 . C T 10.2 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=42 PL:DP:SP:GT:GQ 41,6,0:2:0:1/1:49 | |
| 316 chr10 3148769 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 317 chr10 3151271 . AGTG AGTGTG 61.2 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=50 PL:DP:SP:GT:GQ 100,6,0:2:0:1/1:49 | |
| 318 chr10 3151832 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 319 chr10 3151864 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 320 chr10 3154461 . G A 99 . DP=45;AF1=1;CI95=0.5,1;DP4=1,0,4,5;MQ=46;PV4=1,1,0.2,1 PL:DP:SP:GT:GQ 140,6,0:10:0:1/1:49 | |
| 321 chr10 3155227 . C T 5.46 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,43:2:0:0/1:36 | |
| 322 chr10 3155237 . A G 50.3 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,4,1;MQ=48 PL:DP:SP:GT:GQ 83,15,0:5:0:1/1:75 | |
| 323 chr10 3155540 . A G 99 . DP=18;AF1=1;CI95=1,1;DP4=0,0,12,1;MQ=48 PL:DP:SP:GT:GQ 143,39,0:13:0:1/1:99 | |
| 324 chr10 3155698 . C T 3.78 . DP=12;AF1=0.5552;CI95=0.5,1;DP4=1,0,1,1;MQ=49;PV4=1,1,0.23,1 PL:DP:SP:GT:GQ 31,0,7:3:0:0/1:10 | |
| 325 chr10 3155753 . G C 99 . DP=18;AF1=0.5554;CI95=0.5,1;DP4=0,2,2,8;MQ=47;PV4=1,1,0.24,1 PL:DP:SP:GT:GQ 134,0,7:12:0:0/1:10 | |
| 326 chr10 3155770 . G A 38.3 . DP=11;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=49 PL:DP:SP:GT:GQ 71,15,0:5:0:1/1:75 | |
| 327 chr10 3161131 . C T 18 . DP=19;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=49 PL:DP:SP:GT:GQ 50,9,0:3:0:1/1:63 | |
| 328 chr10 3163512 . T G 13.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 329 chr10 3166221 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 330 chr10 3168403 . G T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 331 chr10 3171809 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 332 chr10 3171995 . G T 72 . DP=11;AF1=1;CI95=1,1;DP4=0,0,7,2;MQ=50 PL:DP:SP:GT:GQ 105,27,0:9:0:1/1:99 | |
| 333 chr10 3172121 . C T 81.1 . DP=18;AF1=1;CI95=1,1;DP4=0,0,4,3;MQ=49 PL:DP:SP:GT:GQ 114,21,0:7:0:1/1:84 | |
| 334 chr10 3172145 . C T 21 . DP=13;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=49 PL:DP:SP:GT:GQ 53,9,0:3:0:1/1:63 | |
| 335 chr10 3177291 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 336 chr10 3178620 . CT CTT 99 . INDEL;DP=15;AF1=0.5;CI95=0.5,0.5;DP4=2,1,8,2;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 210,0,39:13:0:0/1:42 | |
| 337 chr10 3178814 . T A 21.8 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 53,6,0:2:0:1/1:49 | |
| 338 chr10 3178905 . T A 46.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=43 PL:DP:SP:GT:GQ 78,6,0:2:0:1/1:49 | |
| 339 chr10 3196484 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 340 chr10 3197846 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 341 chr10 3202140 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 342 chr10 3208140 . G C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 343 chr10 3211533 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 344 chr10 3216414 . G GGGTTCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 345 chr10 3224789 . A G 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 346 chr10 3238288 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 347 chr10 3240561 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 348 chr10 3250137 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 349 chr10 3273765 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 350 chr10 3274220 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 351 chr10 3275631 . G T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 352 chr10 3280849 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 353 chr10 3317132 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 354 chr10 3326910 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 355 chr10 3378227 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 356 chr10 3383293 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 357 chr10 3386632 . CATG C 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 358 chr10 3396755 . g gCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 359 chr10 3399292 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 360 chr10 3425873 . TTT TTTCGATT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 361 chr10 3439422 . c cATGGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 362 chr10 3448915 . G GTGAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 363 chr10 3457793 . T C 29 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,1,2;MQ=49 PL:DP:SP:GT:GQ 61,9,0:3:0:1/1:63 | |
| 364 chr10 3465482 . C G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 365 chr10 3483061 . G GGTTGGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 366 chr10 3483436 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 367 chr10 3486084 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 368 chr10 3500930 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 369 chr10 3538590 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 370 chr10 3542675 . C CATT 8.19 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 371 chr10 3550687 . g gATGACT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 372 chr10 3568128 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 373 chr10 3626370 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 374 chr10 3627152 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 375 chr10 3633268 . G T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 376 chr10 3642226 . T TCTGCTATTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 377 chr10 3656427 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 378 chr10 3673600 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 379 chr10 3683280 . tg tGAAAAg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 380 chr10 3695384 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=46 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 381 chr10 3704781 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 382 chr10 3715278 . T C 9.31 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=26 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 383 chr10 3721991 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 384 chr10 3739075 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 385 chr10 3744761 . A ATAAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 386 chr10 3755082 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 387 chr10 3761501 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 388 chr10 3767523 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 389 chr10 3769939 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 390 chr10 3790904 . GACACA GACA 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 391 chr10 3791988 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 392 chr10 3797975 . TC TCGCTGC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 393 chr10 3803111 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 394 chr10 3808339 . T A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 395 chr10 3813175 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 396 chr10 3833681 . caggaaa c 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 397 chr10 3842156 . a aTACTCTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 398 chr10 3852253 . T TGCTCC 7.36 . INDEL;DP=2;AF1=0.5016;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,22:2:0:0/1:25 | |
| 399 chr10 3856594 . C G 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=46 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 400 chr10 3859963 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 401 chr10 3870888 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 402 chr10 3874005 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 403 chr10 3879609 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 404 chr10 3908599 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 405 chr10 3908942 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 406 chr10 3937296 . T A 6.98 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 407 chr10 3947128 . A AGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 408 chr10 3969124 . C A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 409 chr10 3985721 . G GCTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 410 chr10 4011287 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 411 chr10 4043073 . G A 15.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47 PL:DP:SP:GT:GQ 47,6,0:2:0:1/1:49 | |
| 412 chr10 4049913 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 413 chr10 4056054 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 414 chr10 4062993 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 415 chr10 4070159 . CC CCAACTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 416 chr10 4071609 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 417 chr10 4082806 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 418 chr10 4091529 . C CCATGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 419 chr10 4107551 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 420 chr10 4119183 . c cAGCAAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 421 chr10 4122749 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 422 chr10 4139880 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 423 chr10 4162375 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 424 chr10 4174297 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 425 chr10 4183010 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 426 chr10 4206865 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 427 chr10 4217547 . A ATC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 428 chr10 4218132 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 429 chr10 4230784 . TG TGGAG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 430 chr10 4264952 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 431 chr10 4296396 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 432 chr10 4311573 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 433 chr10 4323855 . AG AGTTG 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 434 chr10 4325662 . G T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 435 chr10 4363684 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 436 chr10 4380170 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 437 chr10 4380962 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 438 chr10 4386509 . AAG AAGGAATGTAG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 439 chr10 4395416 . T A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 440 chr10 4397809 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 441 chr10 4419552 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 442 chr10 4462632 . g gATAGCCTCTCGGGCATAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 443 chr10 4480502 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 444 chr10 4481824 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 445 chr10 4494576 . GGCAGGTTCCA G 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 446 chr10 4495348 . c cTCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 447 chr10 4503427 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 448 chr10 4505184 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 449 chr10 4514856 . g gAGCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 450 chr10 4517742 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 451 chr10 4565394 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 452 chr10 4573671 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 453 chr10 4577827 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 454 chr10 4586645 . C A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 455 chr10 4598519 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 456 chr10 4602166 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 457 chr10 4609345 . GAT GATAAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 458 chr10 4613513 . A AGGGGGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 459 chr10 4614927 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 460 chr10 4623508 . AA AACCTTTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 461 chr10 4627614 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 462 chr10 4631858 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 463 chr10 4684867 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 464 chr10 4686406 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 465 chr10 4711646 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 466 chr10 4761979 . G GCGCATGGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 467 chr10 4776043 . g gATT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 468 chr10 4787056 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 469 chr10 4815293 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 470 chr10 4830068 . c cGATCGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 471 chr10 4841182 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 472 chr10 4850301 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 473 chr10 4862409 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 474 chr10 4874312 . GT GTT 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 475 chr10 4878143 . TAC TACAC 4.42 . INDEL;DP=5;AF1=0.5008;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,1,1,0.3 PL:DP:SP:GT:GQ 40,0,25:3:0:0/1:28 | |
| 476 chr10 4894228 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 477 chr10 4897820 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 478 chr10 4927652 . G A 30 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,1,2;MQ=48 PL:DP:SP:GT:GQ 62,9,0:3:0:1/1:63 | |
| 479 chr10 4946911 . c cTCGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 480 chr10 4997721 . a aGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 481 chr10 4998386 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 482 chr10 5021518 . C A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 483 chr10 5026052 . A G 25.8 . DP=8;AF1=0.6243;CI95=0.5,1;DP4=0,1,0,3;MQ=46;PV4=1,1,0.065,0.061 PL:DP:SP:GT:GQ 55,0,4:4:0:0/1:6 | |
| 484 chr10 5059730 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 485 chr10 5081490 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 486 chr10 5103912 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 487 chr10 5118322 . A C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 488 chr10 5137734 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 489 chr10 5138535 . A G 8.44 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 39,6,0:2:0:1/1:49 | |
| 490 chr10 5138607 . G A 12 . DP=16;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 43,6,0:2:0:1/1:49 | |
| 491 chr10 5139685 . G A,C 42.3 . DP=15;AF1=1;CI95=0.5,1;DP4=0,0,0,6;MQ=48 PL:DP:SP:GT:GQ 79,19,68,4,0,68:6:0:1/1:75 | |
| 492 chr10 5149703 . G A 67.1 . DP=20;AF1=1;CI95=0.5,1;DP4=0,0,5,1;MQ=48 PL:DP:SP:GT:GQ 100,18,0:6:0:1/1:90 | |
| 493 chr10 5152621 . TTAAAGTAAAG TTAAAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 494 chr10 5164342 . CAA CAAAAAAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 495 chr10 5165395 . T C 7.59 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 38,6,0:2:0:1/1:49 | |
| 496 chr10 5165524 . C T 61.3 . DP=9;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=47 PL:DP:SP:GT:GQ 94,15,0:5:0:1/1:75 | |
| 497 chr10 5174693 . A G 13.9 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 45,6,0:2:0:1/1:49 | |
| 498 chr10 5174794 . C T 30.5 . DP=9;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=49 PL:DP:SP:GT:GQ 63,12,0:4:0:1/1:72 | |
| 499 chr10 5174913 . C T 26 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=48 PL:DP:SP:GT:GQ 58,9,0:3:0:1/1:63 | |
| 500 chr10 5174914 . AGC AGCGC 5.1 . INDEL;DP=8;AF1=0.5031;CI95=0.5,0.5;DP4=0,2,0,1;MQ=49;PV4=1,1,1,0.14 PL:DP:SP:GT:GQ 41,0,19:3:0:0/1:22 | |
| 501 chr10 5203748 . A G 83.3 . DP=48;AF1=1;CI95=0.5,1;DP4=0,1,2,8;MQ=49;PV4=1,1,0.24,1 PL:DP:SP:GT:GQ 116,14,0:11:0:1/1:70 | |
| 502 chr10 5204676 . A C 13.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=46 PL:DP:SP:GT:GQ 45,6,0:2:0:1/1:49 | |
| 503 chr10 5246511 . T C 89 . DP=20;AF1=0.5;CI95=0.5,0.5;DP4=0,8,0,9;MQ=48;PV4=1,0.00027,9e-07,1 PL:DP:SP:GT:GQ 119,0,177:17:0:0/1:99 | |
| 504 chr10 5255024 . C CG 7.35 . INDEL;DP=23;AF1=0.5;CI95=0.5,0.5;DP4=1,4,1,1;MQ=50;PV4=1,1,1,0.21 PL:DP:SP:GT:GQ 44,0,109:7:0:0/1:47 | |
| 505 chr10 5255025 . A G 29 . DP=21;AF1=0.5016;CI95=0.5,0.5;DP4=2,0,1,3;MQ=48;PV4=0.4,1,0.44,1 PL:DP:SP:GT:GQ 59,0,22:6:4:0/1:25 | |
| 506 chr10 5309411 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 507 chr10 5315613 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 508 chr10 5331901 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 509 chr10 5336072 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 510 chr10 5343398 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 511 chr10 5343406 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 512 chr10 5344978 . T A 3.02 . DP=2;AF1=0.5005;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,25:2:0:0/1:27 | |
| 513 chr10 5359452 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 514 chr10 5362753 . TA TACAAGGTGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 515 chr10 5367989 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 516 chr10 5376275 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 517 chr10 5388470 . A C 12 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 43,6,0:2:0:1/1:49 | |
| 518 chr10 5390264 . TAA TAAA 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 519 chr10 5397216 . C CT 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 520 chr10 5400650 . atc aTCTGGACTCtc 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=47 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 521 chr10 5403761 . C G 8.65 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 522 chr10 5409102 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 523 chr10 5418528 . AT ATACACT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 524 chr10 5419505 . C T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 525 chr10 5423482 . cac cACGac 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 526 chr10 5423659 . ct cTGAt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 527 chr10 5428371 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 528 chr10 5434529 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 529 chr10 5435918 . G A 75 . DP=47;AF1=0.9999;CI95=0.5,1;DP4=1,1,9,1;MQ=48;PV4=0.32,1,0.053,1 PL:DP:SP:GT:GQ 105,3,0:12:5:1/1:41 | |
| 530 chr10 5436069 . A G 9.52 . DP=53;AF1=0.5;CI95=0.5,0.5;DP4=17,9,0,9;MQ=49;PV4=0.001,0.00091,3.2e-07,1 PL:DP:SP:GT:GQ 39,0,255:35:30:0/1:42 | |
| 531 chr10 5436260 . A G,T 35.5 . DP=27;AF1=0.8277;CI95=0.5,1;DP4=0,1,4,2;MQ=49;PV4=0.43,1,0.24,1 PL:DP:SP:GT:GQ 67,3,55,4,0,67:7:0:1/1:5 | |
| 532 chr10 5437365 . A G 9.31 . DP=11;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 533 chr10 5443925 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 534 chr10 5446794 . C T 47.3 . DP=19;AF1=1;CI95=0.5,1;DP4=0,0,1,4;MQ=49 PL:DP:SP:GT:GQ 80,15,0:5:0:1/1:75 | |
| 535 chr10 5471122 . T C 9.69 . DP=10;AF1=0.7303;CI95=0.5,1;DP4=1,0,3,0;MQ=49;PV4=1,1,0.21,1 PL:DP:SP:GT:GQ 38,0,2:4:0:0/1:3 | |
| 536 chr10 5471251 . T G 3.54 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,2;MQ=48;PV4=1,0.43,0.21,1 PL:DP:SP:GT:GQ 31,0,32:4:0:0/1:31 | |
| 537 chr10 5477062 . ct cTTAGACCCTAt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 538 chr10 5501391 . AGTCT A 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 539 chr10 5508451 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 540 chr10 5509387 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 541 chr10 5521796 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 542 chr10 5529960 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 543 chr10 5532156 . C CTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 544 chr10 5535554 . A C 4.16 . DP=2;AF1=0.5062;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,16:2:0:0/1:19 | |
| 545 chr10 5567236 . CC CCAC 5.08 . INDEL;DP=10;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,49:3:0:0/1:43 | |
| 546 chr10 5567695 . G A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 547 chr10 5580068 . T A 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 548 chr10 5580115 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 549 chr10 5585046 . tggg tg 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 550 chr10 5597073 . a aGCGCTGAAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 551 chr10 5607539 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 552 chr10 5612161 . G T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 553 chr10 5612317 . T A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 554 chr10 5614025 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 555 chr10 5614502 . A G 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 556 chr10 5617206 . AGAG AGAGGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 557 chr10 5618248 . ct cTGTTGTTGTt 6.56 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 558 chr10 5618551 . T A 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 559 chr10 5618999 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 560 chr10 5631983 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 561 chr10 5657699 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 562 chr10 5661860 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 563 chr10 5667066 . C A 14.2 . DP=4;AF1=0.5;CI95=0.5,0.5;DP4=2,0,0,2;MQ=48;PV4=0.33,0.062,0.11,1 PL:DP:SP:GT:GQ 44,0,80:4:5:0/1:47 | |
| 564 chr10 5669821 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 565 chr10 5683649 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 566 chr10 5693379 . A G 11.3 . DP=6;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,2;MQ=49;PV4=1,0.092,0.048,1 PL:DP:SP:GT:GQ 41,0,127:6:0:0/1:44 | |
| 567 chr10 5703915 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 568 chr10 5712125 . A G 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,35:2:0:0/1:33 | |
| 569 chr10 5720806 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 570 chr10 5738797 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 571 chr10 5740543 . ac aCCc 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 572 chr10 5757001 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 573 chr10 5762551 . CA C 6.55 . INDEL;DP=8;AF1=0.5004;CI95=0.5,0.5;DP4=1,0,2,0;MQ=50;PV4=1,0.061,1,0.05 PL:DP:SP:GT:GQ 43,0,28:3:0:0/1:31 | |
| 574 chr10 5775517 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 575 chr10 5777189 . AC ACTC 5.8 . INDEL;DP=3;AF1=0.5004;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 42,0,28:2:0:0/1:31 | |
| 576 chr10 5781969 . A T 97 . DP=45;AF1=0.5;CI95=0.5,0.5;DP4=10,15,12,6;MQ=49;PV4=0.12,3.3e-14,6.9e-10,1 PL:DP:SP:GT:GQ 127,0,255:43:9:0/1:99 | |
| 577 chr10 5784477 . T A 6.2 . DP=11;AF1=0.4999;CI95=0.5,0.5;DP4=1,1,0,2;MQ=46;PV4=1,0.2,1,0.016 PL:DP:SP:GT:GQ 35,0,56:4:0:0/1:38 | |
| 578 chr10 5790420 . T C 41 . DP=39;AF1=0.5;CI95=0.5,0.5;DP4=12,12,5,7;MQ=50;PV4=0.73,2e-16,0.02,1 PL:DP:SP:GT:GQ 71,0,255:36:1:0/1:74 | |
| 579 chr10 5804633 . TTC TTCTC 99 . INDEL;DP=11;AF1=0.5718;CI95=0.5,1;DP4=0,2,0,7;MQ=50;PV4=1,1,1,0.47 PL:DP:SP:GT:GQ 168,0,6:9:0:0/1:8 | |
| 580 chr10 5805087 . AACA AA 3.25 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,44:2:0:0/1:40 | |
| 581 chr10 5813227 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 582 chr10 5834736 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 583 chr10 5836810 . A G 7.8 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=5,2,3,0;MQ=48;PV4=1,0.3,0.0022,1 PL:DP:SP:GT:GQ 37,0,136:10:0:0/1:40 | |
| 584 chr10 5849064 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 585 chr10 5850689 . Tacacacacacacacacacacaca TACacacacacacacacacacacaca 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 586 chr10 5850698 . A G 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 587 chr10 5886021 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 588 chr10 5927061 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 589 chr10 5931098 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 590 chr10 5943956 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 591 chr10 5957301 . T C 16.1 . DP=6;AF1=0.5;CI95=0.5,0.5;DP4=2,0,3,0;MQ=47;PV4=1,0.32,0.3,1 PL:DP:SP:GT:GQ 46,0,37:5:0:0/1:39 | |
| 592 chr10 5957304 . G T 7.8 . DP=7;AF1=0.5;CI95=0.5,0.5;DP4=2,0,2,0;MQ=46;PV4=1,0.22,0.13,1 PL:DP:SP:GT:GQ 37,0,53:4:0:0/1:40 | |
| 593 chr10 5957602 . C T 99 . DP=20;AF1=0.5;CI95=0.5,0.5;DP4=1,9,0,8;MQ=47;PV4=1,0.15,9.4e-07,1 PL:DP:SP:GT:GQ 145,0,211:18:0:0/1:99 | |
| 594 chr10 5963174 . C T 11.3 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=5,0,9,0;MQ=50;PV4=1,8.2e-18,1,0.057 PL:DP:SP:GT:GQ 41,0,145:14:0:0/1:44 | |
| 595 chr10 5976450 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 596 chr10 5978411 . T C 3.54 . DP=34;AF1=0.4998;CI95=0.5,0.5;DP4=2,1,0,3;MQ=50;PV4=0.4,0.23,0.19,1 PL:DP:SP:GT:GQ 31,0,45:6:4:0/1:34 | |
| 597 chr10 5979175 . G T 6.2 . DP=3;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,1;MQ=49;PV4=1,0.027,0.33,1 PL:DP:SP:GT:GQ 35,0,41:3:0:0/1:37 | |
| 598 chr10 5994914 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 599 chr10 6002368 . T G 99 . DP=61;AF1=1;CI95=1,1;DP4=0,0,3,11;MQ=49 PL:DP:SP:GT:GQ 141,42,0:14:0:1/1:99 | |
| 600 chr10 6023107 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 601 chr10 6023645 . A AAACC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 602 chr10 6029043 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 603 chr10 6041123 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 604 chr10 6043360 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 605 chr10 6055264 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 606 chr10 6060329 . G T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 607 chr10 6063355 . G A 14.2 . DP=13;AF1=0.5;CI95=0.5,0.5;DP4=8,0,2,0;MQ=48;PV4=1,1,0.00044,0.45 PL:DP:SP:GT:GQ 44,0,160:10:0:0/1:47 | |
| 608 chr10 6063383 . T C 36.5 . DP=14;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=47 PL:DP:SP:GT:GQ 69,12,0:4:0:1/1:72 | |
| 609 chr10 6063674 . T C 93 . DP=34;AF1=0.5;CI95=0.5,0.5;DP4=0,18,0,14;MQ=48;PV4=1,6.4e-17,9.3e-11,1 PL:DP:SP:GT:GQ 123,0,243:32:0:0/1:99 | |
| 610 chr10 6066200 . C G 29 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=8,1,4,3;MQ=50;PV4=0.26,4.8e-05,0.29,1 PL:DP:SP:GT:GQ 59,0,211:16:6:0/1:62 | |
| 611 chr10 6066444 . T A 6.98 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,41:2:0:0/1:38 | |
| 612 chr10 6067969 . C T 91 . DP=40;AF1=0.5;CI95=0.5,0.5;DP4=7,14,2,14;MQ=49;PV4=0.25,5.1e-07,0.00017,1 PL:DP:SP:GT:GQ 121,0,255:37:6:0/1:99 | |
| 613 chr10 6068387 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 614 chr10 6072182 . G T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 615 chr10 6083044 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 616 chr10 6087905 . A T 5.29 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=50 PL:DP:SP:GT:GQ 35,6,0:2:0:1/1:49 | |
| 617 chr10 6088136 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 618 chr10 6112229 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 619 chr10 6117352 . T G 13.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 620 chr10 6120427 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 621 chr10 6128948 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 622 chr10 6140019 . AC ACTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 623 chr10 6148059 . A G 19 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=49 PL:DP:SP:GT:GQ 51,9,0:3:0:1/1:63 | |
| 624 chr10 6156118 . T C 75 . DP=10;AF1=1;CI95=1,1;DP4=0,0,0,8;MQ=48 PL:DP:SP:GT:GQ 108,24,0:8:0:1/1:96 | |
| 625 chr10 6157793 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 626 chr10 6199911 . G GTTCAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 627 chr10 6233464 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 628 chr10 6241803 . A G 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 629 chr10 6244168 . TTC TTCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 630 chr10 6245892 . G GAGAGCTTTCGGGAGCC 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 631 chr10 6253171 . ATTGTTGTT ATTGTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 632 chr10 6258015 . T C 14.2 . DP=20;AF1=0.5;CI95=0.5,0.5;DP4=8,0,10,0;MQ=50;PV4=1,5.2e-09,1,1 PL:DP:SP:GT:GQ 44,0,185:18:0:0/1:47 | |
| 633 chr10 6258052 . G A 15.1 . DP=34;AF1=0.5;CI95=0.5,0.5;DP4=18,0,6,1;MQ=50;PV4=0.28,4.5e-05,0.021,0.45 PL:DP:SP:GT:GQ 45,0,227:25:0:0/1:48 | |
| 634 chr10 6258214 . C T 13.2 . DP=36;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,3;MQ=49;PV4=1,0.015,0.078,1 PL:DP:SP:GT:GQ 43,0,101:7:0:0/1:46 | |
| 635 chr10 6258586 . G GAA 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,44:2:0:0/1:42 | |
| 636 chr10 6258937 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 637 chr10 6266047 . G A 99 . DP=45;AF1=0.5;CI95=0.5,0.5;DP4=4,22,5,11;MQ=48;PV4=0.27,8.5e-10,3.5e-11,0.22 PL:DP:SP:GT:GQ 203,0,255:42:6:0/1:99 | |
| 638 chr10 6268422 . A G 43 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=45 PL:DP:SP:GT:GQ 75,9,0:3:0:1/1:63 | |
| 639 chr10 6273372 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 640 chr10 6290965 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 641 chr10 6305503 . aat aATGCat 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 642 chr10 6309201 . a aCC 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 643 chr10 6314864 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 644 chr10 6317296 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 645 chr10 6319970 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 646 chr10 6325969 . cctctctc cCTctctctc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 647 chr10 6335336 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 648 chr10 6335597 . C T 23 . DP=5;AF1=0.5;CI95=0.5,0.5;DP4=2,0,3,0;MQ=48;PV4=1,0.0078,0.012,0.12 PL:DP:SP:GT:GQ 53,0,76:5:0:0/1:56 | |
| 649 chr10 6335700 . G A 99 . DP=9;AF1=1;CI95=1,1;DP4=0,0,3,4;MQ=46 PL:DP:SP:GT:GQ 160,21,0:7:0:1/1:84 | |
| 650 chr10 6336175 . A ATTTGAAG 5.08 . INDEL;DP=7;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,83:3:0:0/1:44 | |
| 651 chr10 6383205 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 652 chr10 6388808 . A T 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 653 chr10 6393824 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 654 chr10 6398385 . C G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 655 chr10 6408998 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 656 chr10 6409781 . T G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 657 chr10 6447274 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 658 chr10 6465164 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 659 chr10 6467077 . CA CAGTATA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 660 chr10 6468203 . T A 13.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 45,6,0:2:0:1/1:49 | |
| 661 chr10 6472720 . CT CTCGT 7.35 . INDEL;DP=7;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 662 chr10 6476234 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 663 chr10 6477128 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 664 chr10 6496943 . AC ACTAGGTCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 665 chr10 6498799 . C G 30 . DP=7;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,4;MQ=47;PV4=1,0.044,0.16,0.22 PL:DP:SP:GT:GQ 60,0,60:6:0:0/1:60 | |
| 666 chr10 6518275 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 667 chr10 6528080 . A G 7.8 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,3;MQ=49;PV4=1,0.23,0.067,0.033 PL:DP:SP:GT:GQ 37,0,75:7:0:0/1:40 | |
| 668 chr10 6532970 . TT TTCACGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 669 chr10 6538907 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 670 chr10 6553170 . C T 99 . DP=28;AF1=0.5;CI95=0.5,0.5;DP4=0,11,0,15;MQ=48;PV4=1,4.2e-07,6.1e-09,1 PL:DP:SP:GT:GQ 135,0,201:26:0:0/1:99 | |
| 671 chr10 6561990 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 672 chr10 6569640 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 673 chr10 6583248 . C T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 674 chr10 6596353 . AATAT AAT 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 675 chr10 6615315 . G A 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 676 chr10 6625990 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 677 chr10 6635219 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 678 chr10 6658562 . T G 3.02 . DP=2;AF1=0.5023;CI95=0.5,0.5;DP4=1,0,0,1;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,20:2:0:0/1:23 | |
| 679 chr10 6663274 . acagt aCAGTcagt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 680 chr10 6663791 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 681 chr10 6692058 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 682 chr10 6696707 . T C 6.2 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,40:2:0:0/1:37 | |
| 683 chr10 6698174 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 684 chr10 6701749 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 685 chr10 6730447 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 686 chr10 6742669 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 687 chr10 6753958 . G T 5.29 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=50 PL:DP:SP:GT:GQ 35,6,0:2:0:1/1:49 | |
| 688 chr10 6759733 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 689 chr10 6762488 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 690 chr10 6780811 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 691 chr10 6797400 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 692 chr10 6812146 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 693 chr10 6821233 . TTT TTTGTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 694 chr10 6825624 . G A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 695 chr10 6834804 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 696 chr10 6838015 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 697 chr10 6856445 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 698 chr10 6891189 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 699 chr10 6892425 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 700 chr10 6894303 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 701 chr10 6896050 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 702 chr10 6899004 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 703 chr10 6904721 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 704 chr10 6908992 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 705 chr10 6909991 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 706 chr10 6928069 . TAC TACTCATAGAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 707 chr10 6946504 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 708 chr10 6964833 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 709 chr10 6966196 . G C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 710 chr10 6970569 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 711 chr10 7001498 . AGTT A 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 712 chr10 7013187 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 713 chr10 7039142 . A T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 714 chr10 7048874 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 715 chr10 7055498 . G GACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 716 chr10 7074074 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 717 chr10 7084430 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 718 chr10 7085086 . AA AAGCAAGGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 719 chr10 7086826 . G T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 720 chr10 7088317 . G A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 721 chr10 7123265 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 722 chr10 7154332 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 723 chr10 7158174 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 724 chr10 7172036 . a aGTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 725 chr10 7185662 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 726 chr10 7193878 . CCT C 6.56 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 727 chr10 7201630 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 728 chr10 7208657 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 729 chr10 7212835 . T C 6.79 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 37,6,0:2:0:1/1:49 | |
| 730 chr10 7231399 . C CTTTGCGAAAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 731 chr10 7238344 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 732 chr10 7260501 . C T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 733 chr10 7272661 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 734 chr10 7281617 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 735 chr10 7285539 . G C 6.98 . DP=10;AF1=0.4999;CI95=0.5,0.5;DP4=3,4,0,2;MQ=48;PV4=0.5,0.24,0.0033,0.092 PL:DP:SP:GT:GQ 36,0,205:9:3:0/1:39 | |
| 736 chr10 7285632 . A G 99 . DP=12;AF1=1;CI95=1,1;DP4=0,0,0,8;MQ=44 PL:DP:SP:GT:GQ 169,24,0:8:0:1/1:96 | |
| 737 chr10 7298521 . G C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 738 chr10 7301457 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 739 chr10 7317468 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 740 chr10 7317809 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 741 chr10 7318803 . T C 70 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=43 PL:DP:SP:GT:GQ 102,9,0:3:0:1/1:63 | |
| 742 chr10 7319541 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 743 chr10 7320209 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 744 chr10 7323593 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 745 chr10 7327301 . AC ACTGCGGCAATCC 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 746 chr10 7333727 . A AGT 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 747 chr10 7344703 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 748 chr10 7358843 . taaa ta 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 749 chr10 7372631 . C A 3.57 . DP=2;AF1=0.5062;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,16:2:0:0/1:19 | |
| 750 chr10 7372973 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 751 chr10 7379218 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 752 chr10 7386999 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 753 chr10 7396438 . gg gGTGTGAg 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 754 chr10 7404155 . CT CTAGGGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 755 chr10 7407888 . c cCTGAA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 756 chr10 7437219 . T C 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 757 chr10 7440458 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 758 chr10 7440702 . GAA G 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 759 chr10 7463242 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 760 chr10 7467275 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 761 chr10 7480743 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 762 chr10 7482792 . G A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 763 chr10 7502856 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 764 chr10 7508940 . G GTCAGCCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 765 chr10 7510140 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 766 chr10 7524741 . A G 8.44 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=50 PL:DP:SP:GT:GQ 39,6,0:2:0:1/1:49 | |
| 767 chr10 7526700 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 768 chr10 7529213 . C A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 769 chr10 7532817 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 770 chr10 7580325 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 771 chr10 7592891 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 772 chr10 7596477 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 773 chr10 7605101 . A G 58.1 . DP=18;AF1=0.508;CI95=0.5,0.5;DP4=0,1,3,4;MQ=49;PV4=1,0.0042,0.27,1 PL:DP:SP:GT:GQ 88,0,15:8:0:0/1:18 | |
| 774 chr10 7605681 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 775 chr10 7614411 . T G 9.31 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 776 chr10 7618686 . T G 4 . DP=19;AF1=0.6241;CI95=0.5,1;DP4=1,0,3,0;MQ=50;PV4=1,1,0.33,1 PL:DP:SP:GT:GQ 31,0,4:4:0:0/1:6 | |
| 777 chr10 7627239 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 778 chr10 7650149 . G T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 779 chr10 7657333 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 780 chr10 7674396 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 781 chr10 7674402 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 782 chr10 7679600 . G A 11.4 . DP=3;AF1=0.504;CI95=0.5,0.5;DP4=1,0,0,2;MQ=47;PV4=0.33,1,0.17,1 PL:DP:SP:GT:GQ 41,0,18:3:0:0/1:21 | |
| 783 chr10 7682870 . C G 31 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=0,10,0,7;MQ=49;PV4=1,2.9e-06,0.014,0.12 PL:DP:SP:GT:GQ 61,0,208:17:0:0/1:64 | |
| 784 chr10 7683826 . C T 6.2 . DP=8;AF1=0.4999;CI95=0.5,0.5;DP4=5,0,3,0;MQ=49;PV4=1,0.0026,0.11,0.42 PL:DP:SP:GT:GQ 35,0,151:8:0:0/1:38 | |
| 785 chr10 7694679 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 786 chr10 7706917 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 787 chr10 7710040 . CG CGG 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 788 chr10 7713162 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 789 chr10 7739714 . ATG ATGGTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 790 chr10 7745398 . A G 11.1 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 42,6,0:2:0:1/1:49 | |
| 791 chr10 7745436 . TTCT TTCTCT 5.08 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=1,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,84:3:0:0/1:44 | |
| 792 chr10 7746274 . GTCT GTCTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 793 chr10 7753796 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 794 chr10 7760073 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 795 chr10 7763661 . A G 99 . DP=37;AF1=1;CI95=1,1;DP4=0,0,4,8;MQ=48 PL:DP:SP:GT:GQ 162,36,0:12:0:1/1:99 | |
| 796 chr10 7765122 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 797 chr10 7767324 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 798 chr10 7769101 . T G 10.4 . DP=15;AF1=0.5001;CI95=0.5,0.5;DP4=0,2,0,2;MQ=48;PV4=1,1,0.27,0.37 PL:DP:SP:GT:GQ 40,0,35:4:0:0/1:37 | |
| 799 chr10 7769102 . C A 18.1 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,4;MQ=48;PV4=1,0.23,1,1 PL:DP:SP:GT:GQ 48,0,50:7:0:0/1:49 | |
| 800 chr10 7773976 . A G 99 . DP=40;AF1=1;CI95=1,1;DP4=0,2,3,24;MQ=45;PV4=1,1,0.00097,1 PL:DP:SP:GT:GQ 255,33,0:29:0:1/1:99 | |
| 801 chr10 7775166 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 802 chr10 7788495 . T C 99 . DP=9;AF1=1;CI95=0.5,1;DP4=0,0,6,0;MQ=44 PL:DP:SP:GT:GQ 141,18,0:6:0:1/1:90 | |
| 803 chr10 7808086 . T C 16.1 . DP=20;AF1=0.5;CI95=0.5,0.5;DP4=0,9,0,5;MQ=49;PV4=1,6.4e-06,0.0046,1 PL:DP:SP:GT:GQ 46,0,204:14:0:0/1:49 | |
| 804 chr10 7817679 . TG TGGG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 805 chr10 7820704 . aaacaacaacaacaacaa aaacaacaacaacaa 4.45 . INDEL;DP=2;AF1=0.5063;CI95=0.5,0.5;DP4=1,0,1,0;MQ=40;PV4=1,1,1,1 PL:DP:SP:GT:GQ 40,0,16:2:0:0/1:19 | |
| 806 chr10 7823299 . T TGTGAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 807 chr10 7826190 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 808 chr10 7829759 . C T 28 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=11,0,3,0;MQ=49;PV4=1,0.11,1.3e-05,0.48 PL:DP:SP:GT:GQ 58,0,207:14:0:0/1:61 | |
| 809 chr10 7832029 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 810 chr10 7839009 . G GCCTC 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=1,1,0,1;MQ=50;PV4=1,0.23,1,0.26 PL:DP:SP:GT:GQ 41,0,91:3:0:0/1:44 | |
| 811 chr10 7844453 . G C 19.1 . DP=30;AF1=0.5;CI95=0.5,0.5;DP4=0,6,0,4;MQ=48;PV4=1,0.21,0.26,1 PL:DP:SP:GT:GQ 49,0,99:10:0:0/1:52 | |
| 812 chr10 7858229 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 813 chr10 7866268 . C G 99 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=5,1,10,1;MQ=47;PV4=1,0.14,5.2e-05,1 PL:DP:SP:GT:GQ 140,0,120:17:0:0/1:99 | |
| 814 chr10 7867373 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 815 chr10 7881581 . T C 4.77 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 816 chr10 7887310 . G GACA 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 817 chr10 7888503 . T G 5.46 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,44:2:0:0/1:37 | |
| 818 chr10 7900849 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 819 chr10 7914935 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 820 chr10 7922623 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 821 chr10 7924322 . T G 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 822 chr10 7928962 . gctga g 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 823 chr10 7951221 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 824 chr10 7971431 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 825 chr10 8006644 . A G 19.1 . DP=32;AF1=0.5;CI95=0.5,0.5;DP4=10,2,0,7;MQ=48;PV4=0.00071,2.9e-05,5.9e-07,1 PL:DP:SP:GT:GQ 49,0,255:19:31:0/1:52 | |
| 826 chr10 8011013 . T G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 827 chr10 8027726 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 828 chr10 8052498 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 829 chr10 8054753 . AC ACCCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 830 chr10 8060267 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 831 chr10 8065016 . TCA TCACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 832 chr10 8072835 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 833 chr10 8078106 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 834 chr10 8087541 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 835 chr10 8093034 . G T 99 . DP=12;AF1=1;CI95=1,1;DP4=0,0,7,2;MQ=47 PL:DP:SP:GT:GQ 150,27,0:9:0:1/1:99 | |
| 836 chr10 8093185 . T C 67 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=1,2,2,4;MQ=49;PV4=1,3.6e-05,0.1,1 PL:DP:SP:GT:GQ 97,0,116:9:0:0/1:99 | |
| 837 chr10 8111621 . C T 8.65 . DP=5;AF1=0.5006;CI95=0.5,0.5;DP4=0,1,0,3;MQ=48;PV4=1,0.2,0.25,1 PL:DP:SP:GT:GQ 38,0,26:4:0:0/1:29 | |
| 838 chr10 8113468 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 839 chr10 8115659 . GCa GCACa 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 840 chr10 8124412 . ACCCC AC 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 841 chr10 8130546 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 842 chr10 8137985 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 843 chr10 8153896 . gt gTAGGTTAAAt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 844 chr10 8154835 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 845 chr10 8154977 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 846 chr10 8155119 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 847 chr10 8174174 . C A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 848 chr10 8203685 . T A 6.2 . DP=7;AF1=0.4999;CI95=0.5,0.5;DP4=2,2,0,2;MQ=48;PV4=0.47,0.045,0.0075,1 PL:DP:SP:GT:GQ 35,0,151:6:3:0/1:38 | |
| 849 chr10 8203747 . C G 3.54 . DP=5;AF1=0.4998;CI95=0.5,0.5;DP4=0,2,0,2;MQ=48;PV4=1,0.017,0.065,1 PL:DP:SP:GT:GQ 31,0,66:4:0:0/1:34 | |
| 850 chr10 8214908 . ca cATGCTa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 851 chr10 8228113 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 852 chr10 8266429 . A T 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,40:2:0:0/1:34 | |
| 853 chr10 8273815 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 854 chr10 8291535 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 855 chr10 8309399 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 856 chr10 8310066 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 857 chr10 8310074 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 858 chr10 8325980 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 859 chr10 8334712 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 860 chr10 8341599 . A AGTTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 861 chr10 8383074 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 862 chr10 8384743 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 863 chr10 8400030 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 864 chr10 8411801 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 865 chr10 8417397 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 866 chr10 8437028 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 867 chr10 8442297 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 868 chr10 8453116 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 869 chr10 8489354 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 870 chr10 8536819 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 871 chr10 8551520 . cc cCCTGc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 872 chr10 8555690 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 873 chr10 8567077 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 874 chr10 8586046 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 875 chr10 8599658 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 876 chr10 8611772 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 877 chr10 8617096 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 878 chr10 8650428 . tttgtgg t 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 879 chr10 8662011 . G C 8.44 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 39,6,0:2:0:1/1:49 | |
| 880 chr10 8662172 . GGAGAGAGAGAG GGAGAGAGAG 8.19 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 881 chr10 8662376 . CA CAGA 5.08 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=1,1,0,1;MQ=50;PV4=1,1,1,0.12 PL:DP:SP:GT:GQ 41,0,52:3:0:0/1:44 | |
| 882 chr10 8662406 . C G 4.61 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 34,6,0:2:0:1/1:49 | |
| 883 chr10 8694859 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 884 chr10 8703716 . T C 6.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 885 chr10 8717443 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 886 chr10 8717503 . G GTCCATGAAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 887 chr10 8742322 . g gCTCGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 888 chr10 8745573 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 889 chr10 8755718 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 890 chr10 8768014 . T TCG 3.25 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 891 chr10 8768115 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 892 chr10 8810270 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 893 chr10 8831706 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 894 chr10 8855749 . caaat c 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 895 chr10 8867747 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 896 chr10 8908547 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 897 chr10 8939192 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 898 chr10 8946508 . G C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 899 chr10 8947243 . ACGC AC 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 900 chr10 8963742 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 901 chr10 8973031 . aggg a 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 902 chr10 8973485 . A C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 903 chr10 8999204 . C A 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 904 chr10 9030362 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 905 chr10 9033797 . G T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 906 chr10 9053392 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 907 chr10 9055524 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 908 chr10 9057068 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 909 chr10 9085838 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 910 chr10 9086523 . ctt cTTTAtt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 911 chr10 9104465 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 912 chr10 9115406 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 913 chr10 9127422 . A C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 914 chr10 9138124 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 915 chr10 9139272 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 916 chr10 9179358 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 917 chr10 9187905 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 918 chr10 9192380 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 919 chr10 9214386 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 920 chr10 9219450 . A C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 921 chr10 9222150 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 922 chr10 9222152 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 923 chr10 9222823 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 924 chr10 9228780 . G A 6.98 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 925 chr10 9228832 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 926 chr10 9232394 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 927 chr10 9243854 . C CGGAGGAACCTT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 928 chr10 9262505 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 929 chr10 9282475 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 930 chr10 9287933 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 931 chr10 9289861 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 932 chr10 9320937 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 933 chr10 9323657 . TCACA TCA 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 934 chr10 9369663 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 935 chr10 9404283 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 936 chr10 9441484 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 937 chr10 9459150 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 938 chr10 9461792 . G A 11.5 . DP=4;AF1=0.5263;CI95=0.5,1;DP4=0,2,2,0;MQ=38;PV4=0.33,1,1,1 PL:DP:SP:GT:GQ 41,0,10:4:5:0/1:13 | |
| 939 chr10 9466576 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 940 chr10 9472401 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 941 chr10 9511933 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 942 chr10 9549885 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 943 chr10 9588139 . C G 5.46 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 944 chr10 9597899 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 945 chr10 9613109 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 946 chr10 9637931 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 947 chr10 9646991 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 948 chr10 9657243 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 949 chr10 9657396 . G A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 950 chr10 9675353 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 951 chr10 9681881 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 952 chr10 9690549 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 953 chr10 9703950 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 954 chr10 9735160 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 955 chr10 9736885 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 956 chr10 9745870 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 957 chr10 9765758 . A G 4.13 . DP=7;AF1=0.5002;CI95=0.5,0.5;DP4=2,0,2,0;MQ=49;PV4=1,1,0.092,0.33 PL:DP:SP:GT:GQ 32,0,29:4:0:0/1:30 | |
| 958 chr10 9766624 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 959 chr10 9790682 . T TGGTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 960 chr10 9792214 . T G 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 961 chr10 9800300 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 962 chr10 9805942 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 963 chr10 9815156 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 964 chr10 9815942 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 965 chr10 9825437 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 966 chr10 9838783 . G GGGAGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 967 chr10 9843599 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 968 chr10 9863170 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 969 chr10 9872669 . G T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 970 chr10 9902627 . A G 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 971 chr10 9905772 . C A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 972 chr10 9910242 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 973 chr10 9937142 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 974 chr10 9943555 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 975 chr10 9950296 . TAGAG TAG 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 976 chr10 9952242 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 977 chr10 9980383 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 978 chr10 10041678 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 979 chr10 10049832 . A ACC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 980 chr10 10068941 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 981 chr10 10088977 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 982 chr10 10090034 . AG AGAGCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 983 chr10 10115616 . T A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 984 chr10 10154346 . T TCTGTCTCCCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 985 chr10 10165340 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 986 chr10 10185810 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 987 chr10 10189924 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 988 chr10 10190260 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 989 chr10 10198031 . T A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 990 chr10 10216447 . C G 8.79 . DP=3;AF1=0.5206;CI95=0.5,1;DP4=0,1,0,2;MQ=48;PV4=1,1,0.17,1 PL:DP:SP:GT:GQ 38,0,11:3:0:0/1:14 | |
| 991 chr10 10219226 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 992 chr10 10257824 . A C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 993 chr10 10258432 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 994 chr10 10313110 . GTAT GTATAT 8.19 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 995 chr10 10313296 . A T 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 996 chr10 10320473 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 997 chr10 10325528 . t tCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 998 chr10 10329928 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 999 chr10 10341502 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1000 chr10 10341909 . G A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 1001 chr10 10353685 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1002 chr10 10354061 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 1003 chr10 10358187 . c cTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1004 chr10 10362570 . at aTTTTAGt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1005 chr10 10367584 . AT ATGCCT 7.36 . INDEL;DP=2;AF1=0.502;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,21:2:0:0/1:24 | |
| 1006 chr10 10368923 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 1007 chr10 10398079 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1008 chr10 10420728 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 1009 chr10 10427575 . AG AGAGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1010 chr10 10440742 . tggt tGGTAggt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1011 chr10 10450521 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1012 chr10 10464488 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 1013 chr10 10504802 . A ACGCGTGC 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 1014 chr10 10527036 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1015 chr10 10528781 . C T 6.79 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 37,6,0:2:0:1/1:49 | |
| 1016 chr10 10548137 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1017 chr10 10567217 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1018 chr10 10568893 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1019 chr10 10571363 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 1020 chr10 10591097 . A C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 1021 chr10 10591555 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1022 chr10 10596276 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 1023 chr10 10597558 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 1024 chr10 10617446 . CT CTACGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1025 chr10 10617572 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1026 chr10 10636761 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1027 chr10 10640677 . T G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 1028 chr10 10675323 . t tTTTTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1029 chr10 10678785 . aagt aAGTagt 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 1030 chr10 10685264 . G C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 1031 chr10 10685391 . t tATGTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1032 chr10 10690561 . T TAAGACGTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1033 chr10 10726149 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1034 chr10 10731061 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 1035 chr10 10741107 . g gCAGTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1036 chr10 10789388 . C T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 1037 chr10 10800950 . G C 3.57 . DP=2;AF1=0.5048;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,17:2:0:0/1:20 | |
| 1038 chr10 10807980 . G A 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 1039 chr10 10836911 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1040 chr10 10865794 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 1041 chr10 10866003 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1042 chr10 10869371 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1043 chr10 10874309 . TG TGAGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1044 chr10 10882868 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1045 chr10 10923647 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1046 chr10 10926000 . C G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 1047 chr10 10954617 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1048 chr10 10964648 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1049 chr10 10968275 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 1050 chr10 11003815 . A AGG 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 1051 chr10 11024559 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 1052 chr10 11046033 . C CATCTGTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1053 chr10 11051492 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1054 chr10 11096652 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1055 chr10 11121444 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1056 chr10 11140423 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1057 chr10 11147029 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1058 chr10 11149346 . G GTCAGA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1059 chr10 11176783 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1060 chr10 11179577 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1061 chr10 11211628 . C A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 1062 chr10 11235174 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1063 chr10 11254360 . T TCG 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 1064 chr10 11255421 . TT TTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1065 chr10 11258217 . G T 6.98 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,44:2:0:0/1:38 | |
| 1066 chr10 11261582 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1067 chr10 11267403 . TC TCGC 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 1068 chr10 11280021 . C A 4.77 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,35:2:0:0/1:34 | |
| 1069 chr10 11288742 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1070 chr10 11289987 . A G 7.8 . DP=2;AF1=0.5012;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,23:2:0:0/1:26 | |
| 1071 chr10 11296298 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1072 chr10 11299603 . TCACA TCA 3.8 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,0.14,1,0.19 PL:DP:SP:GT:GQ 39,0,83:3:0:0/1:42 | |
| 1073 chr10 11299735 . A T 42.3 . DP=38;AF1=0.5336;CI95=0.5,1;DP4=0,1,3,2;MQ=49;PV4=1,0.16,0.29,1 PL:DP:SP:GT:GQ 72,0,9:6:0:0/1:12 | |
| 1074 chr10 11307343 . GA GAGCAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1075 chr10 11314213 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1076 chr10 11320255 . T TGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1077 chr10 11329463 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 1078 chr10 11344531 . C CTGCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1079 chr10 11344949 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1080 chr10 11347236 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1081 chr10 11356093 . TTTT TTTTGTTT 99 . INDEL;DP=42;AF1=0.5;CI95=0.5,0.5;DP4=1,4,12,13;MQ=50;PV4=0.35,1,1,1 PL:DP:SP:GT:GQ 255,0,41:30:4:0/1:44 | |
| 1082 chr10 11356094 . TTTT TTTGTTT 99 . INDEL;DP=42;AF1=0.5;CI95=0.5,0.5;DP4=0,4,5,2;MQ=50;PV4=0.061,1,1,1 PL:DP:SP:GT:GQ 174,0,71:11:12:0/1:74 | |
| 1083 chr10 11356095 . TT TTGT 70.5 . INDEL;DP=41;AF1=0.5;CI95=0.5,0.5;DP4=1,6,5,1;MQ=50;PV4=0.029,1,1,1 PL:DP:SP:GT:GQ 108,0,118:13:15:0/1:99 | |
| 1084 chr10 11356096 . TT TTGGGT 36.5 . INDEL;DP=40;AF1=0.5;CI95=0.5,0.5;DP4=0,7,1,2;MQ=50;PV4=0.3,0.3,1,1 PL:DP:SP:GT:GQ 74,0,174:10:0:0/1:77 | |
| 1085 chr10 11363315 . G A 4.13 . DP=9;AF1=0.4998;CI95=0.5,0.5;DP4=0,6,0,2;MQ=49;PV4=1,0.31,4.4e-06,1 PL:DP:SP:GT:GQ 32,0,135:8:0:0/1:35 | |
| 1086 chr10 11367780 . CTTTTTTTTT CTTTTTTTT 4.93 . INDEL;DP=13;AF1=1;CI95=0.5,1;DP4=2,0,7,2;MQ=50;PV4=1,0.0017,1,1 PL:DP:SP:GT:GQ 43,10,0:11:0:1/1:60 | |
| 1087 chr10 11371087 . A C 4.13 . DP=19;AF1=0.4998;CI95=0.5,0.5;DP4=0,9,0,4;MQ=49;PV4=1,0.05,1,0.19 PL:DP:SP:GT:GQ 32,0,123:13:0:0/1:35 | |
| 1088 chr10 11372772 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1089 chr10 11374036 . TA TAGA 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 1090 chr10 11377471 . A G 16.1 . DP=3;AF1=0.5005;CI95=0.5,0.5;DP4=1,0,0,2;MQ=43;PV4=0.33,0.38,1,0.3 PL:DP:SP:GT:GQ 46,0,27:3:0:0/1:30 | |
| 1091 chr10 11382013 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1092 chr10 11402705 . A G 27.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=46 PL:DP:SP:GT:GQ 59,6,0:2:0:1/1:49 | |
| 1093 chr10 11404664 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 1094 chr10 11423312 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1095 chr10 11438205 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1096 chr10 11444524 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1097 chr10 11444529 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1098 chr10 11463098 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1099 chr10 11476014 . T C 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 1100 chr10 11480114 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1101 chr10 11492783 . T A 6.98 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 1102 chr10 11492868 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1103 chr10 11493705 . C CGTTAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1104 chr10 11499292 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1105 chr10 11515329 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 1106 chr10 11530300 . gatacta g 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 1107 chr10 11545365 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1108 chr10 11545959 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1109 chr10 11559650 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1110 chr10 11564516 . AT ATTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1111 chr10 11575145 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1112 chr10 11596780 . A C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 1113 chr10 11616469 . TAA TAAAAA 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 1114 chr10 11623996 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1115 chr10 11629328 . T A 6.98 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 1116 chr10 11647114 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1117 chr10 11647362 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 1118 chr10 11648775 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1119 chr10 11681558 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1120 chr10 11699610 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1121 chr10 11701797 . A T 7.03 . DP=2;AF1=0.508;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,15:2:0:0/1:18 | |
| 1122 chr10 11706086 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1123 chr10 11713902 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1124 chr10 11726302 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1125 chr10 11737178 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1126 chr10 11740044 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 1127 chr10 11741042 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 1128 chr10 11741444 . G T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 1129 chr10 11749099 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1130 chr10 11757203 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1131 chr10 11757711 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1132 chr10 11780816 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1133 chr10 11783646 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1134 chr10 11789382 . G A 64 . DP=43;AF1=0.5;CI95=0.5,0.5;DP4=8,12,18,2;MQ=50;PV4=0.0022,9.8e-14,0.0078,1 PL:DP:SP:GT:GQ 94,0,255:40:27:0/1:97 | |
| 1135 chr10 11789511 . C G 39 . DP=51;AF1=0.5;CI95=0.5,0.5;DP4=6,26,0,13;MQ=49;PV4=0.16,3e-08,0.00025,1 PL:DP:SP:GT:GQ 69,0,255:45:8:0/1:72 | |
| 1136 chr10 11791741 . CCCAGCAATCCAGCAAT CCCAGCAAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1137 chr10 11797467 . G A 99 . DP=29;AF1=0.5;CI95=0.5,0.5;DP4=2,11,1,11;MQ=48;PV4=1,8.4e-05,0.00015,0.39 PL:DP:SP:GT:GQ 131,0,255:25:0:0/1:99 | |
| 1138 chr10 11798405 . G GTTTGGGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1139 chr10 11802061 . AA AACAGCAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1140 chr10 11814446 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1141 chr10 11817451 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1142 chr10 11818292 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1143 chr10 11821473 . T C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 1144 chr10 11837060 . G T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1145 chr10 11871779 . AAAT A 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 1146 chr10 11872015 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1147 chr10 11888326 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1148 chr10 11892955 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 1149 chr10 11907141 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 1150 chr10 11919033 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1151 chr10 11933304 . C G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 1152 chr10 11938771 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 1153 chr10 11938973 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1154 chr10 11962711 . T TATTGAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1155 chr10 11972224 . A C 13 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 44,6,0:2:0:1/1:49 | |
| 1156 chr10 11978499 . T G 20.6 . DP=28;AF1=0.5718;CI95=0.5,1;DP4=0,1,5,0;MQ=49;PV4=0.17,0.2,0.35,1 PL:DP:SP:GT:GQ 50,0,6:6:0:0/1:8 | |
| 1157 chr10 11997226 . T C 46 . DP=8;AF1=0.5;CI95=0.5,0.5;DP4=4,0,3,1;MQ=46;PV4=1,0.0011,0.47,1 PL:DP:SP:GT:GQ 76,0,123:8:0:0/1:79 | |
| 1158 chr10 12026798 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1159 chr10 12040241 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1160 chr10 12041766 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1161 chr10 12043144 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1162 chr10 12068030 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1163 chr10 12073196 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1164 chr10 12081920 . G T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 1165 chr10 12162800 . CCGGC CC 7.35 . INDEL;DP=12;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 1166 chr10 12180178 . C A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 1167 chr10 12191620 . C A 13.2 . DP=20;AF1=0.5;CI95=0.5,0.5;DP4=7,1,0,6;MQ=49;PV4=0.0047,0.00066,0.022,1 PL:DP:SP:GT:GQ 43,0,193:14:23:0/1:46 | |
| 1168 chr10 12198019 . G A 99 . DP=26;AF1=1;CI95=1,1;DP4=0,0,0,24;MQ=43 PL:DP:SP:GT:GQ 235,72,0:24:0:1/1:99 | |
| 1169 chr10 12200091 . T TTTGTCCAC 7.36 . INDEL;DP=13;AF1=0.502;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,21:2:0:0/1:24 | |
| 1170 chr10 12200125 . C T 99 . DP=11;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=45 PL:DP:SP:GT:GQ 133,21,0:7:0:1/1:84 | |
| 1171 chr10 12202866 . A T 99 . DP=23;AF1=1;CI95=1,1;DP4=0,0,21,0;MQ=47 PL:DP:SP:GT:GQ 154,63,0:21:0:1/1:99 | |
| 1172 chr10 12203147 . A C 11.1 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=45 PL:DP:SP:GT:GQ 42,6,0:2:0:1/1:49 | |
| 1173 chr10 12203851 . TA TATCA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1174 chr10 12209752 . T C 99 . DP=39;AF1=1;CI95=1,1;DP4=0,0,15,19;MQ=49 PL:DP:SP:GT:GQ 207,102,0:34:0:1/1:99 | |
| 1175 chr10 12227067 . C G 7.8 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 1176 chr10 12240499 . T G 5.46 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,44:2:0:0/1:37 | |
| 1177 chr10 12244382 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 1178 chr10 12250496 . G A 3.02 . DP=2;AF1=0.5004;CI95=0.5,0.5;DP4=0,1,0,1;MQ=37;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,26:2:0:0/1:28 | |
| 1179 chr10 12269343 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1180 chr10 12289023 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1181 chr10 12292344 . A G 78 . DP=28;AF1=0.5;CI95=0.5,0.5;DP4=0,12,0,15;MQ=48;PV4=1,2.1e-13,6.2e-06,0.3 PL:DP:SP:GT:GQ 108,0,217:27:0:0/1:99 | |
| 1182 chr10 12302154 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 1183 chr10 12327920 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1184 chr10 12334139 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1185 chr10 12359550 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1186 chr10 12379538 . TTCCAC TTCCACTCCAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1187 chr10 12392570 . GCTCTCTC GCTCTC 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 1188 chr10 12404365 . g gGA 7.52 . INDEL;DP=3;AF1=0.5263;CI95=0.5,1;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,10:2:0:0/1:13 | |
| 1189 chr10 12404366 . c cT 3.81 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 1190 chr10 12412156 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1191 chr10 12432105 . CCATA C 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=1,1,0,1;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,58:3:0:0/1:44 | |
| 1192 chr10 12432434 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 1193 chr10 12437874 . c cAA 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 1194 chr10 12455553 . aatgatgatgatga aatgatgatga 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1195 chr10 12455573 . ggatgatgat gGATgatgatgat 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1196 chr10 12458724 . A ACT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 1197 chr10 12459266 . a aAGT 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1198 chr10 12463166 . C CGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1199 chr10 12492129 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1200 chr10 12501788 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1201 chr10 12505127 . G T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1202 chr10 12520590 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1203 chr10 12557194 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1204 chr10 12564120 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1205 chr10 12580664 . C T 18.1 . DP=5;AF1=0.5;CI95=0.5,0.5;DP4=0,2,1,2;MQ=49;PV4=1,0.0009,0.25,1 PL:DP:SP:GT:GQ 48,0,77:5:0:0/1:51 | |
| 1206 chr10 12606062 . c cGATAACGCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1207 chr10 12606110 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1208 chr10 12621819 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1209 chr10 12629149 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 1210 chr10 12645633 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1211 chr10 12661012 . agtg ag 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 1212 chr10 12670200 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1213 chr10 12692577 . G A 19.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 51,6,0:2:0:1/1:49 | |
| 1214 chr10 12753087 . T TGGACTCAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1215 chr10 12765340 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 1216 chr10 12770050 . tcaca tCAcaca 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 1217 chr10 12779293 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 1218 chr10 12790226 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 1219 chr10 12802861 . A G 4.78 . DP=4;AF1=0.5024;CI95=0.5,0.5;DP4=1,0,2,0;MQ=48;PV4=1,0.24,0.33,1 PL:DP:SP:GT:GQ 33,0,20:3:0:0/1:23 | |
| 1220 chr10 12814928 . G T 18.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 50,6,0:2:0:1/1:49 | |
| 1221 chr10 12820986 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1222 chr10 12828005 . T TC 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 1223 chr10 12831446 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 1224 chr10 12837407 . TCC TCCAGACC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1225 chr10 12857595 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1226 chr10 12858045 . G A 99 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,6,0;MQ=43 PL:DP:SP:GT:GQ 153,18,0:6:0:1/1:90 | |
| 1227 chr10 12858409 . A G 99 . DP=15;AF1=1;CI95=1,1;DP4=0,0,0,13;MQ=44 PL:DP:SP:GT:GQ 213,39,0:13:0:1/1:99 | |
| 1228 chr10 12865355 . T C 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 1229 chr10 12867559 . TC TCGC 7.35 . INDEL;DP=8;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,37:2:0:0/1:39 | |
| 1230 chr10 12867598 . C G 81 . DP=34;AF1=0.5;CI95=0.5,0.5;DP4=12,6,8,4;MQ=50;PV4=1,2.5e-07,0.01,1 PL:DP:SP:GT:GQ 111,0,255:30:0:0/1:99 | |
| 1231 chr10 12867658 . G A 13.2 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=1,6,0,4;MQ=48;PV4=1,0.00039,0.1,1 PL:DP:SP:GT:GQ 43,0,205:11:0:0/1:46 | |
| 1232 chr10 12869325 . C G 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1233 chr10 12874670 . CA CAGCTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1234 chr10 12893294 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 1235 chr10 12920969 . A AGT 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 1236 chr10 12923216 . C G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 1237 chr10 12938917 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1238 chr10 12947934 . A C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 1239 chr10 12950094 . G GTGTACTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1240 chr10 12965457 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 1241 chr10 12965912 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 1242 chr10 12966417 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1243 chr10 12999615 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1244 chr10 13002586 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 1245 chr10 13003472 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1246 chr10 13020203 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 1247 chr10 13039005 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1248 chr10 13046209 . t tTCTTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1249 chr10 13067118 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1250 chr10 13100381 . A G 3.54 . DP=13;AF1=0.4998;CI95=0.5,0.5;DP4=1,3,2,1;MQ=48;PV4=0.49,0.013,0.0038,1 PL:DP:SP:GT:GQ 31,0,142:7:3:0/1:34 | |
| 1251 chr10 13105884 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1252 chr10 13110123 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1253 chr10 13146957 . C A 7.8 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 1254 chr10 13158262 . C T 54.1 . DP=20;AF1=1;CI95=1,1;DP4=0,0,7,0;MQ=49 PL:DP:SP:GT:GQ 87,21,0:7:0:1/1:84 | |
| 1255 chr10 13164596 . A G 9.31 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 1256 chr10 13175682 . A C 4.61 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 34,6,0:2:0:1/1:49 | |
| 1257 chr10 13184678 . C G 30 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,1,2;MQ=49 PL:DP:SP:GT:GQ 62,9,0:3:0:1/1:63 | |
| 1258 chr10 13186875 . C T 45.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=43 PL:DP:SP:GT:GQ 77,6,0:2:0:1/1:49 | |
| 1259 chr10 13200137 . T C 3.69 . DP=8;AF1=0.5334;CI95=0.5,1;DP4=0,1,0,2;MQ=49;PV4=1,1,0.33,1 PL:DP:SP:GT:GQ 31,0,9:3:0:0/1:12 | |
| 1260 chr10 13214812 . A G 23 . DP=9;AF1=0.5003;CI95=0.5,0.5;DP4=0,1,0,6;MQ=47;PV4=1,0.0037,0.31,1 PL:DP:SP:GT:GQ 53,0,29:7:0:0/1:32 | |
| 1261 chr10 13231194 . A G 23.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=45 PL:DP:SP:GT:GQ 55,6,0:2:0:1/1:49 | |
| 1262 chr10 13237015 . G A 88 . DP=21;AF1=1;CI95=1,1;DP4=1,0,17,0;MQ=48;PV4=1,0.2,0.23,1 PL:DP:SP:GT:GQ 121,25,0:18:0:1/1:99 | |
| 1263 chr10 13240562 . G T 3.64 . DP=8;AF1=0.5205;CI95=0.5,0.5;DP4=1,0,1,1;MQ=49;PV4=1,1,0.33,1 PL:DP:SP:GT:GQ 31,0,11:3:0:0/1:14 | |
| 1264 chr10 13240887 . G C 47.1 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,6;MQ=49 PL:DP:SP:GT:GQ 80,18,0:6:0:1/1:90 | |
| 1265 chr10 13245804 . AAGAG AAG 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 1266 chr10 13271552 . C CAT 3.25 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=3,0,1,0;MQ=50;PV4=1,1,1,0.3 PL:DP:SP:GT:GQ 38,0,114:4:0:0/1:41 | |
| 1267 chr10 13271629 . C T 77 . DP=36;AF1=0.5;CI95=0.5,0.5;DP4=16,7,8,0;MQ=48;PV4=0.15,0.019,4.5e-24,1 PL:DP:SP:GT:GQ 107,0,255:31:8:0/1:99 | |
| 1268 chr10 13275514 . A T,G 5.44 . DP=15;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=49 PL:DP:SP:GT:GQ 60,33,37,24,0,37:5:0:1/1:63 | |
| 1269 chr10 13276141 . C G 10.2 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=46 PL:DP:SP:GT:GQ 41,6,0:2:0:1/1:49 | |
| 1270 chr10 13276154 . C T 3.01 . DP=5;AF1=0.4997;CI95=0.5,0.5;DP4=2,0,2,0;MQ=46;PV4=1,0.044,1,0.33 PL:DP:SP:GT:GQ 30,0,71:4:0:0/1:33 | |
| 1271 chr10 13276179 . A G 99 . DP=10;AF1=1;CI95=1,1;DP4=0,0,8,0;MQ=46 PL:DP:SP:GT:GQ 136,24,0:8:0:1/1:96 | |
| 1272 chr10 13278982 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 1273 chr10 13289979 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1274 chr10 13322348 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1275 chr10 13330402 . T C 99 . DP=17;AF1=1;CI95=1,1;DP4=0,0,4,8;MQ=49 PL:DP:SP:GT:GQ 140,36,0:12:0:1/1:99 | |
| 1276 chr10 13336287 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 1277 chr10 13337588 . G A 99 . DP=23;AF1=1;CI95=1,1;DP4=0,1,0,21;MQ=46;PV4=1,1,0.024,1 PL:DP:SP:GT:GQ 163,40,0:22:0:1/1:99 | |
| 1278 chr10 13348402 . C G 8.44 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=49 PL:DP:SP:GT:GQ 39,6,0:2:0:1/1:49 | |
| 1279 chr10 13361173 . T G 6.2 . DP=6;AF1=0.4999;CI95=0.5,0.5;DP4=2,0,0,2;MQ=43;PV4=0.33,1,0.14,0.027 PL:DP:SP:GT:GQ 35,0,40:4:5:0/1:37 | |
| 1280 chr10 13375906 . T C 58 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=45 PL:DP:SP:GT:GQ 90,9,0:3:0:1/1:63 | |
| 1281 chr10 13378282 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1282 chr10 13378793 . AAAAATG AAAAATGAAAATG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1283 chr10 13380864 . T C 23 . DP=9;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=41 PL:DP:SP:GT:GQ 55,9,0:3:0:1/1:63 | |
| 1284 chr10 13380866 . A G 61.1 . DP=9;AF1=0.5163;CI95=0.5,1;DP4=0,1,0,6;MQ=44;PV4=1,0.25,1,1 PL:DP:SP:GT:GQ 91,0,12:7:0:0/1:15 | |
| 1285 chr10 13393792 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1286 chr10 13405457 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1287 chr10 13451561 . t tCGGGACGGTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1288 chr10 13451852 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1289 chr10 13465954 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 1290 chr10 13488702 . TAACACAACA TAACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1291 chr10 13489201 . AT ATT 55.5 . INDEL;DP=19;AF1=0.5;CI95=0.5,0.5;DP4=11,0,5,0;MQ=50;PV4=1,1,1,0.15 PL:DP:SP:GT:GQ 93,0,131:16:0:0/1:96 | |
| 1292 chr10 13495254 . AGGCGG AGGCGGCGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1293 chr10 13497801 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 1294 chr10 13504706 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 1295 chr10 13505305 . GA GAGAAGTAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1296 chr10 13511287 . GT GTTGAT 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1297 chr10 13511294 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1298 chr10 13513933 . CG CGTG 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 1299 chr10 13540527 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 1300 chr10 13541724 . TA TAAAACA 99 . INDEL;DP=36;AF1=0.5;CI95=0.5,0.5;DP4=14,0,10,1;MQ=50;PV4=0.44,0.22,0.13,0.052 PL:DP:SP:GT:GQ 212,0,224:25:0:0/1:99 | |
| 1301 chr10 13542425 . T C 13 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=49 PL:DP:SP:GT:GQ 44,6,0:2:0:1/1:49 | |
| 1302 chr10 13544640 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1303 chr10 13554796 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1304 chr10 13581885 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 1305 chr10 13630636 . AT ATGTCGCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1306 chr10 13637110 . tg tGGGCg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1307 chr10 13653675 . T C 48 . DP=37;AF1=0.5;CI95=0.5,0.5;DP4=8,4,0,9;MQ=49;PV4=0.0046,0.0038,0.0049,0.069 PL:DP:SP:GT:GQ 78,0,243:21:23:0/1:81 | |
| 1308 chr10 13670867 . t tGGTAGA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 1309 chr10 13682995 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1310 chr10 13692283 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1311 chr10 13694443 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1312 chr10 13696570 . A G 4.61 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 34,6,0:2:0:1/1:49 | |
| 1313 chr10 13697550 . AAC AACAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1314 chr10 13697609 . TCTTCCTTCCT TCTTCCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1315 chr10 13702231 . C T 22 . DP=13;AF1=0.5;CI95=0.5,0.5;DP4=7,0,5,0;MQ=49;PV4=1,0.00064,0.015,1 PL:DP:SP:GT:GQ 52,0,176:12:0:0/1:55 | |
| 1316 chr10 13705307 . ACT A 8.19 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 1317 chr10 13706732 . gc gCGCACc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1318 chr10 13710080 . GAT GATTCAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1319 chr10 13715014 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 1320 chr10 13725573 . ggtaac g 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 1321 chr10 13735947 . A G 62 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=5,10,2,3;MQ=49;PV4=1,0.013,1.7e-05,0.37 PL:DP:SP:GT:GQ 92,0,255:20:0:0/1:95 | |
| 1322 chr10 13739046 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1323 chr10 13740360 . A G 43.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=43 PL:DP:SP:GT:GQ 75,6,0:2:0:1/1:49 | |
| 1324 chr10 13743391 . C A 20 . DP=30;AF1=0.5;CI95=0.5,0.5;DP4=6,6,0,6;MQ=49;PV4=0.054,0.034,0.0021,0.19 PL:DP:SP:GT:GQ 50,0,243:18:13:0/1:53 | |
| 1325 chr10 13745167 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1326 chr10 13749011 . GC GCCGCGCTGTAC 5.08 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,1,1,0.15 PL:DP:SP:GT:GQ 41,0,56:3:0:0/1:44 | |
| 1327 chr10 13752703 . G A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 1328 chr10 13753426 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1329 chr10 13760512 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1330 chr10 13770464 . T TCTGTCGAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1331 chr10 13770685 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 1332 chr10 13782605 . G A 99 . DP=37;AF1=1;CI95=1,1;DP4=0,0,0,33;MQ=48 PL:DP:SP:GT:GQ 155,99,0:33:0:1/1:99 | |
| 1333 chr10 13802889 . G GCC 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 1334 chr10 13814507 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 1335 chr10 13821981 . C A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 1336 chr10 13836436 . a aTCGTGCCCGT 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=46 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 1337 chr10 13854242 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1338 chr10 13857832 . C T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 1339 chr10 13862050 . g gAGAAGAA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1340 chr10 13870022 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1341 chr10 13880472 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1342 chr10 13881933 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 1343 chr10 13883727 . gc gCAGAGAc 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 1344 chr10 13885175 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 1345 chr10 13914174 . TAGGAAGG TAGG 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 1346 chr10 13928128 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1347 chr10 13964006 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1348 chr10 13966122 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1349 chr10 13972761 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 1350 chr10 14017142 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1351 chr10 14019598 . t tTCGAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1352 chr10 14035946 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1353 chr10 14048616 . G GAAAGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1354 chr10 14056073 . tg tGAg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1355 chr10 14061824 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1356 chr10 14081627 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1357 chr10 14085158 . A AAAAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1358 chr10 14099512 . T C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 1359 chr10 14134058 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1360 chr10 14140431 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1361 chr10 14140947 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1362 chr10 14142398 . ATAAT A 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 1363 chr10 14146307 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 1364 chr10 14150276 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1365 chr10 14151366 . A ATCAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1366 chr10 14155098 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=46 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1367 chr10 14159658 . GAG GAGCAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1368 chr10 14190348 . TAAAA TAAAAAAAAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1369 chr10 14219396 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1370 chr10 14227756 . G C 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 1371 chr10 14256502 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 1372 chr10 14278447 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1373 chr10 14297142 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 1374 chr10 14322382 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1375 chr10 14328001 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 1376 chr10 14328206 . G A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 1377 chr10 14348281 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1378 chr10 14353064 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1379 chr10 14353991 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1380 chr10 14366808 . ccc cCCGcc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1381 chr10 14369030 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1382 chr10 14374469 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1383 chr10 14385517 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1384 chr10 14396185 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 1385 chr10 14403865 . A G 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1386 chr10 14406167 . G T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 1387 chr10 14408447 . AC ACTC 7.52 . INDEL;DP=2;AF1=0.5263;CI95=0.5,1;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,10:2:0:0/1:13 | |
| 1388 chr10 14411869 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 1389 chr10 14427455 . C A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 1390 chr10 14435135 . G C 18.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47 PL:DP:SP:GT:GQ 50,6,0:2:0:1/1:49 | |
| 1391 chr10 14438338 . C A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 1392 chr10 14440418 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1393 chr10 14462972 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1394 chr10 14473852 . T TG 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 1395 chr10 14477490 . AAGAG AAG 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 1396 chr10 14507248 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 1397 chr10 14523185 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 1398 chr10 14539286 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 1399 chr10 14559122 . T A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 1400 chr10 14559556 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1401 chr10 14572103 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 1402 chr10 14594295 . TCAATG T 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 1403 chr10 14600349 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1404 chr10 14624110 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 1405 chr10 14630283 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 1406 chr10 14631138 . g gACA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 1407 chr10 14633936 . G T 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1408 chr10 14638644 . G A 7.8 . DP=2;AF1=0.5002;CI95=0.5,0.5;DP4=1,0,1,0;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,30:2:0:0/1:32 | |
| 1409 chr10 14663415 . A G 31.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=45 PL:DP:SP:GT:GQ 63,6,0:2:0:1/1:49 | |
| 1410 chr10 14667258 . cgtgtgtgtgtgtgtgtgtgt cgtgtgtgtgtgtgtgtgt 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=48 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 1411 chr10 14673497 . C CTAGCGGGTCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1412 chr10 14679052 . G A 5.46 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1413 chr10 14692518 . G C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 1414 chr10 14728015 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 1415 chr10 14728459 . A G 13.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 1416 chr10 14731304 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1417 chr10 14760703 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 1418 chr10 14765157 . C T 62 . DP=11;AF1=0.5;CI95=0.5,0.5;DP4=2,0,7,1;MQ=46;PV4=1,0.00038,0.38,1 PL:DP:SP:GT:GQ 92,0,57:10:0:0/1:60 | |
| 1419 chr10 14768376 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1420 chr10 14780316 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 1421 chr10 14790691 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1422 chr10 14797150 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1423 chr10 14800039 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1424 chr10 14847933 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 1425 chr10 14869928 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 1426 chr10 14898760 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1427 chr10 14925968 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 1428 chr10 14955601 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 1429 chr10 14960048 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 1430 chr10 14966193 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1431 chr10 14970631 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1432 chr10 14974843 . G A 14.2 . DP=35;AF1=0.5;CI95=0.5,0.5;DP4=17,2,12,0;MQ=49;PV4=0.51,6.6e-14,1,0.48 PL:DP:SP:GT:GQ 44,0,255:31:3:0/1:47 | |
| 1433 chr10 14981804 . G GCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1434 chr10 14997378 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1435 chr10 15014418 . C G 32 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=8,1,8,0;MQ=49;PV4=1,2.1e-11,0.032,0.35 PL:DP:SP:GT:GQ 62,0,239:17:0:0/1:65 | |
| 1436 chr10 15014440 . A G 75 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=8,0,9,0;MQ=48;PV4=1,1e-07,0.0042,0.4 PL:DP:SP:GT:GQ 105,0,190:17:0:0/1:99 | |
| 1437 chr10 15014698 . C T 12.3 . DP=7;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,2;MQ=48;PV4=1,0.13,0.008,1 PL:DP:SP:GT:GQ 42,0,96:5:0:0/1:45 | |
| 1438 chr10 15018637 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1439 chr10 15021672 . t tCAATA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1440 chr10 15045611 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 1441 chr10 15056782 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1442 chr10 15070043 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1443 chr10 15072929 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 1444 chr10 15074804 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1445 chr10 15082493 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1446 chr10 15082495 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1447 chr10 15083960 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 1448 chr10 15104815 . g gT 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 1449 chr10 15115023 . T A 13.2 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=14,0,4,0;MQ=49;PV4=1,0.00094,0.0006,1 PL:DP:SP:GT:GQ 43,0,227:18:0:0/1:46 | |
| 1450 chr10 15134065 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1451 chr10 15138615 . C T 65.1 . DP=65;AF1=1;CI95=1,1;DP4=0,0,3,4;MQ=50 PL:DP:SP:GT:GQ 98,21,0:7:0:1/1:84 | |
| 1452 chr10 15177189 . gtttt g 9.71 . INDEL;DP=4;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=50 PL:DP:SP:GT:GQ 48,6,0:2:0:1/1:49 | |
| 1453 chr10 15177280 . T C 16.1 . DP=21;AF1=0.5;CI95=0.5,0.5;DP4=4,5,3,1;MQ=49;PV4=0.56,0.0067,0.00038,1 PL:DP:SP:GT:GQ 46,0,255:13:3:0/1:49 | |
| 1454 chr10 15194960 . C G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 1455 chr10 15226306 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1456 chr10 15236182 . ag aGCg 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 1457 chr10 15245139 . G A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 1458 chr10 15249337 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1459 chr10 15255101 . G A 28 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=0,6,5,0;MQ=47;PV4=0.0022,0.097,0.13,1 PL:DP:SP:GT:GQ 58,0,118:11:27:0/1:61 | |
| 1460 chr10 15255324 . C T 13.2 . DP=16;AF1=0.5001;CI95=0.5,0.5;DP4=0,1,0,2;MQ=44;PV4=1,0.037,1,1 PL:DP:SP:GT:GQ 43,0,34:3:0:0/1:36 | |
| 1461 chr10 15290603 . TGGTAG TGGTAGGTAG 99 . INDEL;DP=26;AF1=0.5;CI95=0.5,0.5;DP4=12,1,10,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 207,0,255:23:0:0/1:99 | |
| 1462 chr10 15290696 . C T 99 . DP=28;AF1=0.5;CI95=0.5,0.5;DP4=1,12,0,10;MQ=46;PV4=1,0.17,0.0046,1 PL:DP:SP:GT:GQ 129,0,201:23:0:0/1:99 | |
| 1463 chr10 15309743 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1464 chr10 15309884 . CAC CACTAAGAAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1465 chr10 15321848 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 1466 chr10 15332761 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 1467 chr10 15335903 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 1468 chr10 15352058 . T G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 1469 chr10 15353884 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1470 chr10 15359527 . g gCTCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1471 chr10 15367384 . G C 4.77 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1472 chr10 15368454 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1473 chr10 15391455 . C CGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1474 chr10 15407246 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1475 chr10 15440905 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 1476 chr10 15449099 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 1477 chr10 15465880 . C T 9.53 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 1478 chr10 15473508 . t tATATGTCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1479 chr10 15481420 . G C 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 1480 chr10 15518628 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1481 chr10 15539511 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 1482 chr10 15540722 . C T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 1483 chr10 15546831 . C A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 1484 chr10 15560280 . T G 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,34:2:0:0/1:33 | |
| 1485 chr10 15570314 . A T 4.77 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1486 chr10 15590239 . ca cAATCTCTa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1487 chr10 15600077 . A G 10.4 . DP=23;AF1=0.5;CI95=0.5,0.5;DP4=5,1,0,3;MQ=48;PV4=0.048,0.15,0.036,0.22 PL:DP:SP:GT:GQ 40,0,142:9:13:0/1:43 | |
| 1488 chr10 15605141 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 1489 chr10 15618926 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 1490 chr10 15634272 . C T 84 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=4,10,2,5;MQ=48;PV4=1,2e-11,1.5e-05,0.22 PL:DP:SP:GT:GQ 114,0,255:21:0:0/1:99 | |
| 1491 chr10 15674166 . T TCG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1492 chr10 15675993 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1493 chr10 15681533 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1494 chr10 15686227 . ACA ACATGCA,ACCA 9.94 . INDEL;DP=5;AF1=0.9999;CI95=0.5,1;DP4=0,0,2,0;MQ=50 PL:DP:SP:GT:GQ 79,35,47,32,0,44:2:0:1/1:41 | |
| 1495 chr10 15713541 . T C 12 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=44 PL:DP:SP:GT:GQ 43,6,0:2:0:1/1:49 | |
| 1496 chr10 15720841 . T TTAAC 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,1,1,0.46 PL:DP:SP:GT:GQ 41,0,58:3:0:0/1:44 | |
| 1497 chr10 15729923 . C T 94 . DP=37;AF1=0.5;CI95=0.5,0.5;DP4=18,0,16,0;MQ=48;PV4=1,7.5e-15,1.1e-10,1 PL:DP:SP:GT:GQ 124,0,240:34:0:0/1:99 | |
| 1498 chr10 15735536 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1499 chr10 15749221 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1500 chr10 15762449 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1501 chr10 15770990 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 1502 chr10 15780255 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1503 chr10 15787031 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1504 chr10 15795510 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 1505 chr10 15797075 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1506 chr10 15798067 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1507 chr10 15804352 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1508 chr10 15805645 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 1509 chr10 15809109 . T G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 1510 chr10 15824085 . A G 13.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 45,6,0:2:0:1/1:49 | |
| 1511 chr10 15828708 . TCA TCACCA 5.08 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,1,1,0.22 PL:DP:SP:GT:GQ 41,0,83:3:0:0/1:44 | |
| 1512 chr10 15875024 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1513 chr10 15880134 . A G 3.55 . DP=2;AF1=0.5014;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,22:2:0:0/1:24 | |
| 1514 chr10 15891063 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1515 chr10 15919550 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1516 chr10 15919563 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1517 chr10 15932679 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1518 chr10 15997259 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1519 chr10 15999938 . G A 18.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 50,6,0:2:0:1/1:49 | |
| 1520 chr10 16002030 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1521 chr10 16023432 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1522 chr10 16047825 . C CGGT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 1523 chr10 16062965 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1524 chr10 16084809 . TC TCGCATCCTGACC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1525 chr10 16091869 . A ATCCCCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1526 chr10 16099662 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1527 chr10 16100393 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 1528 chr10 16102469 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 1529 chr10 16116720 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1530 chr10 16153569 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1531 chr10 16217184 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1532 chr10 16219444 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1533 chr10 16243510 . acac a 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 1534 chr10 16278310 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 1535 chr10 16281080 . C T 7.59 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=50 PL:DP:SP:GT:GQ 38,6,0:2:0:1/1:49 | |
| 1536 chr10 16288066 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1537 chr10 16305579 . TA TAAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1538 chr10 16352999 . g gAAAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1539 chr10 16363379 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1540 chr10 16379398 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1541 chr10 16380751 . gaa gAACAGTTCGAaa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1542 chr10 16381894 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1543 chr10 16381902 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1544 chr10 16394706 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1545 chr10 16394721 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1546 chr10 16403685 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1547 chr10 16429612 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 1548 chr10 16468186 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 1549 chr10 16473533 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1550 chr10 16483081 . G A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 1551 chr10 16492276 . ctgg c 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 1552 chr10 16507255 . CTAAGGTA CTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1553 chr10 16514859 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1554 chr10 16524175 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 1555 chr10 16534575 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 1556 chr10 16539523 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 1557 chr10 16548705 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1558 chr10 16552472 . G A 19.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 51,6,0:2:0:1/1:49 | |
| 1559 chr10 16556953 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 1560 chr10 16558019 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 1561 chr10 16562934 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1562 chr10 16562946 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1563 chr10 16580048 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1564 chr10 16582121 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1565 chr10 16582322 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1566 chr10 16582665 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 1567 chr10 16609415 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1568 chr10 16609430 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1569 chr10 16643815 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 1570 chr10 16667820 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1571 chr10 16698939 . C G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 1572 chr10 16717905 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1573 chr10 16730157 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1574 chr10 16734874 . T C 5.46 . DP=3;AF1=0.4999;CI95=0.5,0.5;DP4=1,1,0,1;MQ=48;PV4=1,0.41,0,0.33 PL:DP:SP:GT:GQ 34,0,81:3:0:0/1:37 | |
| 1575 chr10 16734892 . AC ACCATCC 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1576 chr10 16736487 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1577 chr10 16737212 . G T 22 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=0,9,0,3;MQ=48;PV4=1,0.27,0.0029,1 PL:DP:SP:GT:GQ 52,0,171:12:0:0/1:55 | |
| 1578 chr10 16743830 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1579 chr10 16760578 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 1580 chr10 16761172 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 1581 chr10 16797033 . A G 82 . DP=23;AF1=1;CI95=1,1;DP4=0,1,0,21;MQ=48;PV4=1,0.011,0.23,1 PL:DP:SP:GT:GQ 115,29,0:22:0:1/1:99 | |
| 1582 chr10 16806316 . C A 6.2 . DP=3;AF1=0.5;CI95=0.5,0.5;DP4=1,0,2,0;MQ=48;PV4=1,0.061,0.26,1 PL:DP:SP:GT:GQ 35,0,37:3:0:0/1:36 | |
| 1583 chr10 16821177 . G A 54.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=43 PL:DP:SP:GT:GQ 86,6,0:2:0:1/1:49 | |
| 1584 chr10 16839300 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1585 chr10 16853781 . T TCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1586 chr10 16860265 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1587 chr10 16866929 . G A 45 . DP=6;AF1=0.5002;CI95=0.5,0.5;DP4=1,0,5,0;MQ=48;PV4=1,0.00024,0.097,1 PL:DP:SP:GT:GQ 75,0,32:6:0:0/1:35 | |
| 1588 chr10 16867164 . A G 3.54 . DP=3;AF1=0.4998;CI95=0.5,0.5;DP4=0,2,0,1;MQ=48;PV4=1,0.48,0,0.23 PL:DP:SP:GT:GQ 31,0,59:3:0:0/1:34 | |
| 1589 chr10 16870262 . ca cAAa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1590 chr10 16870882 . TC TCTCC 7.35 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 1591 chr10 16871015 . T TTC 5.08 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,1,1,0.27 PL:DP:SP:GT:GQ 41,0,78:3:0:0/1:44 | |
| 1592 chr10 16875564 . CCT C 3.25 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,44:2:0:0/1:40 | |
| 1593 chr10 16877080 . G C 6.79 . DP=19;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 37,6,0:2:0:1/1:49 | |
| 1594 chr10 16879974 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1595 chr10 16880212 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 1596 chr10 16881009 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1597 chr10 16882518 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 1598 chr10 16882928 . G A 7.8 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 1599 chr10 16890586 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 1600 chr10 16898774 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1601 chr10 16911605 . C A 29.3 . DP=10;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=49 PL:DP:SP:GT:GQ 62,15,0:5:0:1/1:75 | |
| 1602 chr10 16917507 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1603 chr10 16918972 . A G 68.5 . DP=45;AF1=1;CI95=0.5,1;DP4=1,0,3,6;MQ=49;PV4=0.4,0.085,0.33,1 PL:DP:SP:GT:GQ 99,4,0:10:0:1/1:45 | |
| 1604 chr10 16932711 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 1605 chr10 16933502 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1606 chr10 16953354 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1607 chr10 16967401 . C T 13 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 44,6,0:2:0:1/1:49 | |
| 1608 chr10 16975024 . T A 4.13 . DP=9;AF1=0.4998;CI95=0.5,0.5;DP4=5,0,4,0;MQ=50;PV4=1,5.9e-06,0.14,1 PL:DP:SP:GT:GQ 32,0,156:9:0:0/1:35 | |
| 1609 chr10 16979566 . G T 22 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=7,1,3,0;MQ=48;PV4=1,0.35,6.4e-05,1 PL:DP:SP:GT:GQ 52,0,169:11:0:0/1:55 | |
| 1610 chr10 16979661 . T C 48.5 . DP=28;AF1=1;CI95=0.5,1;DP4=0,0,1,3;MQ=48 PL:DP:SP:GT:GQ 81,12,0:4:0:1/1:72 | |
| 1611 chr10 16979751 . T A 23 . DP=20;AF1=0.5;CI95=0.5,0.5;DP4=0,6,0,4;MQ=48;PV4=1,0.47,0.024,1 PL:DP:SP:GT:GQ 53,0,86:10:0:0/1:56 | |
| 1612 chr10 16989271 . C T 99 . DP=44;AF1=0.5;CI95=0.5,0.5;DP4=4,24,5,8;MQ=48;PV4=0.11,2.5e-08,3.2e-11,0.13 PL:DP:SP:GT:GQ 187,0,255:41:9:0/1:99 | |
| 1613 chr10 16989427 . T C 33.5 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=49 PL:DP:SP:GT:GQ 66,12,0:4:0:1/1:72 | |
| 1614 chr10 16991212 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1615 chr10 16994945 . T TACTCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1616 chr10 17000617 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 1617 chr10 17008039 . G A 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 1618 chr10 17012140 . C CCT 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 1619 chr10 17027882 . G GACAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1620 chr10 17032509 . C A 4.13 . DP=5;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,2;MQ=48;PV4=1,0.044,0.33,1 PL:DP:SP:GT:GQ 32,0,38:3:0:0/1:34 | |
| 1621 chr10 17046643 . a aTCTAAG 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=49 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 1622 chr10 17060243 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1623 chr10 17063887 . C A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 1624 chr10 17087156 . G A 99 . DP=45;AF1=0.5;CI95=0.5,0.5;DP4=11,14,7,11;MQ=49;PV4=0.76,2.4e-11,2.6e-15,1 PL:DP:SP:GT:GQ 183,0,255:43:1:0/1:99 | |
| 1625 chr10 17109974 . AACACA AACA 38.2 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=50 PL:DP:SP:GT:GQ 77,6,0:2:0:1/1:49 | |
| 1626 chr10 17117677 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 1627 chr10 17126128 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 1628 chr10 17131524 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 1629 chr10 17151714 . CTCTTC CTC 5.8 . INDEL;DP=23;AF1=0.5004;CI95=0.5,0.5;DP4=1,0,0,2;MQ=50;PV4=0.33,0.5,1,1 PL:DP:SP:GT:GQ 42,0,28:3:0:0/1:31 | |
| 1630 chr10 17151718 . TCC TCCACCC 5.08 . INDEL;DP=22;AF1=0.5;CI95=0.5,0.5;DP4=1,1,0,1;MQ=50;PV4=1,1,1,0.3 PL:DP:SP:GT:GQ 41,0,49:3:0:0/1:43 | |
| 1631 chr10 17152855 . G A 4.77 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1632 chr10 17156151 . A G 43.4 . DP=18;AF1=0.5554;CI95=0.5,1;DP4=0,2,5,1;MQ=49;PV4=0.11,1,0.073,0.32 PL:DP:SP:GT:GQ 73,0,7:8:10:0/1:10 | |
| 1633 chr10 17157314 . G C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 1634 chr10 17157630 . C T 99 . DP=41;AF1=1;CI95=1,1;DP4=0,1,3,27;MQ=48;PV4=1,0.00029,0.24,1 PL:DP:SP:GT:GQ 186,43,0:31:0:1/1:99 | |
| 1635 chr10 17165677 . TT TGGCCCACAT,TTCT 9.94 . INDEL;DP=8;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,2;MQ=50 PL:DP:SP:GT:GQ 54,10,47,7,0,44:2:0:1/1:41 | |
| 1636 chr10 17169011 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1637 chr10 17173474 . C A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 1638 chr10 17176827 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1639 chr10 17181747 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1640 chr10 17185313 . G A 54.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=43 PL:DP:SP:GT:GQ 86,6,0:2:0:1/1:49 | |
| 1641 chr10 17185769 . T TACAATTCCGGCGCC 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 1642 chr10 17186121 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1643 chr10 17193898 . a aTGGGAAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1644 chr10 17199419 . C G 12.3 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 1645 chr10 17204098 . C T 70 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=9,0,7,0;MQ=48;PV4=1,1.2e-05,0.001,0.033 PL:DP:SP:GT:GQ 100,0,205:16:0:0/1:99 | |
| 1646 chr10 17216556 . C T 7.8 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=11,1,3,1;MQ=49;PV4=0.45,0.00011,0.003,0.17 PL:DP:SP:GT:GQ 37,0,255:16:3:0/1:40 | |
| 1647 chr10 17217311 . G GTGAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1648 chr10 17226625 . A C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 1649 chr10 17226764 . A G 5.48 . DP=2;AF1=0.5031;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,19:2:0:0/1:22 | |
| 1650 chr10 17233760 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1651 chr10 17251208 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1652 chr10 17262187 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 1653 chr10 17265301 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1654 chr10 17275861 . C T 99 . DP=26;AF1=0.5;CI95=0.5,0.5;DP4=0,8,1,12;MQ=47;PV4=1,0.0036,0.00025,1 PL:DP:SP:GT:GQ 163,0,150:21:0:0/1:99 | |
| 1655 chr10 17279077 . T TTCTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1656 chr10 17284512 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 1657 chr10 17297016 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1658 chr10 17313916 . G T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 1659 chr10 17317536 . A C 4.13 . DP=3;AF1=0.4998;CI95=0.5,0.5;DP4=1,1,0,1;MQ=47;PV4=1,0.07,0,1 PL:DP:SP:GT:GQ 32,0,91:3:0:0/1:35 | |
| 1660 chr10 17321826 . tg tGGg 7.35 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 1661 chr10 17354334 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1662 chr10 17362625 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1663 chr10 17365044 . T G 30.5 . DP=18;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=49 PL:DP:SP:GT:GQ 63,12,0:4:0:1/1:72 | |
| 1664 chr10 17365187 . AT ATTACACT 7.35 . INDEL;DP=7;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 1665 chr10 17382951 . C A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 1666 chr10 17391945 . a aGAGAGGAGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1667 chr10 17393838 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1668 chr10 17396795 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1669 chr10 17416472 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1670 chr10 17439837 . T A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 1671 chr10 17445898 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1672 chr10 17449070 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1673 chr10 17452443 . G T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 1674 chr10 17456731 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1675 chr10 17457356 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1676 chr10 17458956 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1677 chr10 17471912 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1678 chr10 17487937 . C G 10.4 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 1679 chr10 17492263 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1680 chr10 17511815 . t tG 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 1681 chr10 17526303 . t tCACCACTGCAGGCTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1682 chr10 17529405 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 1683 chr10 17537756 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 1684 chr10 17549810 . c cTG 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 1685 chr10 17575011 . T G 3.55 . DP=2;AF1=0.5023;CI95=0.5,0.5;DP4=0,1,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,20:2:0:0/1:23 | |
| 1686 chr10 17590834 . T C 9.53 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 1687 chr10 17619866 . GA GATA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1688 chr10 17619943 . A G 21 . DP=10;AF1=0.5;CI95=0.5,0.5;DP4=3,0,1,2;MQ=47;PV4=0.4,0.17,0.037,0.19 PL:DP:SP:GT:GQ 51,0,76:6:4:0/1:54 | |
| 1689 chr10 17636310 . C T 51 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=8,6,1,7;MQ=49;PV4=0.074,3.5e-09,0.018,0.48 PL:DP:SP:GT:GQ 81,0,255:22:11:0/1:84 | |
| 1690 chr10 17640486 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 1691 chr10 17645675 . G A 3.54 . DP=7;AF1=0.4998;CI95=0.5,0.5;DP4=1,2,0,1;MQ=48;PV4=1,1,0.048,1 PL:DP:SP:GT:GQ 31,0,109:4:0:0/1:34 | |
| 1692 chr10 17645814 . C T 99 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,2,3;MQ=45 PL:DP:SP:GT:GQ 138,15,0:5:0:1/1:75 | |
| 1693 chr10 17646088 . T C,A 9.93 . DP=13;AF1=0.8277;CI95=0.5,1;DP4=0,1,0,5;MQ=48;PV4=1,1,0.12,0.073 PL:DP:SP:GT:GQ 66,28,37,29,0,46:6:0:1/1:5 | |
| 1694 chr10 17658524 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1695 chr10 17659820 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1696 chr10 17668727 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 1697 chr10 17686489 . TTCC TCAGAATCC 8.19 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=49 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 1698 chr10 17687365 . G C 21 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=46 PL:DP:SP:GT:GQ 53,9,0:3:0:1/1:63 | |
| 1699 chr10 17687381 . T C 13.9 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=45 PL:DP:SP:GT:GQ 45,6,0:2:0:1/1:49 | |
| 1700 chr10 17690011 . agacgac agac 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 1701 chr10 17702629 . ag aGTCTCTTTg 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1702 chr10 17722410 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 1703 chr10 17730251 . A G 4.77 . DP=9;AF1=0.5003;CI95=0.5,0.5;DP4=0,2,0,2;MQ=47;PV4=1,1,0.35,0.39 PL:DP:SP:GT:GQ 33,0,28:4:0:0/1:30 | |
| 1704 chr10 17735258 . C A 3.54 . DP=8;AF1=0.4998;CI95=0.5,0.5;DP4=0,3,2,0;MQ=48;PV4=0.1,0.00034,0.48,0.0035 PL:DP:SP:GT:GQ 31,0,107:5:10:0/1:34 | |
| 1705 chr10 17743893 . aacaca aaca 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 1706 chr10 17758429 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1707 chr10 17865281 . CTGTG CTG 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 1708 chr10 17949707 . A T 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1709 chr10 18138639 . A G 98.3 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,1,4;MQ=44 PL:DP:SP:GT:GQ 131,15,0:5:0:1/1:75 | |
| 1710 chr10 18223323 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1711 chr10 18242304 . T C 99 . DP=26;AF1=0.505;CI95=0.5,0.5;DP4=2,0,7,9;MQ=46;PV4=0.47,0.032,0.014,1 PL:DP:SP:GT:GQ 223,0,17:18:3:0/1:20 | |
| 1712 chr10 18245559 . CACCTGT C 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1713 chr10 18250411 . T C 4.77 . DP=3;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,42:2:0:0/1:35 | |
| 1714 chr10 18280201 . G A 3.54 . DP=8;AF1=0.4998;CI95=0.5,0.5;DP4=2,1,1,1;MQ=48;PV4=1,0.21,0.086,1 PL:DP:SP:GT:GQ 31,0,71:5:0:0/1:34 | |
| 1715 chr10 18284712 . T A 4.13 . DP=12;AF1=0.4998;CI95=0.5,0.5;DP4=0,6,0,3;MQ=48;PV4=1,0.15,0.012,1 PL:DP:SP:GT:GQ 32,0,113:9:0:0/1:35 | |
| 1716 chr10 18288400 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 1717 chr10 18290757 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1718 chr10 18297554 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 1719 chr10 18325205 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1720 chr10 18340276 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 1721 chr10 18344751 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1722 chr10 18359773 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1723 chr10 18364983 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 1724 chr10 18371847 . T G 9.31 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=44 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 1725 chr10 18380472 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1726 chr10 18382998 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1727 chr10 18389905 . AA AATGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1728 chr10 18423524 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1729 chr10 18429177 . GC GCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1730 chr10 18430087 . CG CGAG 7.35 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 1731 chr10 18439747 . C T 35 . DP=7;AF1=0.5;CI95=0.5,0.5;DP4=2,0,4,0;MQ=48;PV4=1,0.19,0.16,1 PL:DP:SP:GT:GQ 65,0,48:6:0:0/1:51 | |
| 1732 chr10 18443726 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 1733 chr10 18450544 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1734 chr10 18463096 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1735 chr10 18482614 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1736 chr10 18485921 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1737 chr10 18497231 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 1738 chr10 18499906 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1739 chr10 18506098 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 1740 chr10 18508446 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 1741 chr10 18522364 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1742 chr10 18525165 . G A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 1743 chr10 18534358 . T A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 1744 chr10 18536053 . G A 3.01 . DP=3;AF1=0.4997;CI95=0.5,0.5;DP4=2,0,1,0;MQ=47;PV4=1,0,0,1 PL:DP:SP:GT:GQ 30,0,83:3:0:0/1:33 | |
| 1745 chr10 18546450 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 1746 chr10 18564858 . C T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 1747 chr10 18595199 . G GAT 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1748 chr10 18596796 . A T 11.1 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47 PL:DP:SP:GT:GQ 42,6,0:2:0:1/1:49 | |
| 1749 chr10 18603045 . GT GTT 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 1750 chr10 18604610 . A C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 1751 chr10 18616825 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1752 chr10 18617931 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 1753 chr10 18621963 . T TTCACGTCA 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 1754 chr10 18627025 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1755 chr10 18656135 . A ACCAACTCTCACTCC 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 1756 chr10 18662092 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1757 chr10 18668052 . CTTTG CTTTGAATTTTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1758 chr10 18690826 . C CCTCTGTATCA 7.36 . INDEL;DP=4;AF1=0.5012;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,23:2:0:0/1:26 | |
| 1759 chr10 18691018 . G A 83 . DP=28;AF1=0.5;CI95=0.5,0.5;DP4=1,8,1,14;MQ=49;PV4=1,3.1e-09,0.013,1 PL:DP:SP:GT:GQ 113,0,220:24:0:0/1:99 | |
| 1760 chr10 18706714 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1761 chr10 18728720 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1762 chr10 18734527 . CGAGAGAGA CGAGAGA 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 1763 chr10 18736663 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1764 chr10 18742210 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 1765 chr10 18792385 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1766 chr10 18792398 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1767 chr10 18802810 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 1768 chr10 18805393 . GAGA GAGAACAGA 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 1769 chr10 18813959 . aa aACCGGGTTGGGGGa 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1770 chr10 18817113 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1771 chr10 18828371 . C T 99 . DP=29;AF1=1;CI95=1,1;DP4=0,0,6,15;MQ=48 PL:DP:SP:GT:GQ 238,63,0:21:0:1/1:99 | |
| 1772 chr10 18828686 . T TACTGAGCAGTAGTGC 3.25 . INDEL;DP=15;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,1;MQ=50;PV4=1,1,1,0.33 PL:DP:SP:GT:GQ 38,0,85:4:0:0/1:41 | |
| 1773 chr10 18832494 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1774 chr10 18833196 . C CGT 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 1775 chr10 18840919 . T A 30 . DP=10;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=47 PL:DP:SP:GT:GQ 62,9,0:3:0:1/1:63 | |
| 1776 chr10 18842529 . g gTTA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1777 chr10 18845972 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 1778 chr10 18856296 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1779 chr10 18869759 . C A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 1780 chr10 18874852 . A C 5.29 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 35,6,0:2:0:1/1:49 | |
| 1781 chr10 18888947 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1782 chr10 18888963 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1783 chr10 18894965 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1784 chr10 18898729 . GT GTT 44.4 . INDEL;DP=4;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=50 PL:DP:SP:GT:GQ 84,9,0:3:0:1/1:63 | |
| 1785 chr10 18903605 . A C 24 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=49 PL:DP:SP:GT:GQ 56,9,0:3:0:1/1:63 | |
| 1786 chr10 18917356 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1787 chr10 18931078 . T TCGG 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 1788 chr10 18931512 . T C 99 . DP=14;AF1=1;CI95=0.5,1;DP4=0,1,0,13;MQ=44;PV4=1,1,3.4e-06,1 PL:DP:SP:GT:GQ 197,16,0:14:0:1/1:80 | |
| 1789 chr10 18937579 . AAAGAAG AAAGAAGAAG 99 . INDEL;DP=5;AF1=0.5013;CI95=0.5,0.5;DP4=0,1,0,4;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 140,0,23:5:0:0/1:26 | |
| 1790 chr10 18944699 . CCACAC CCAC 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 1791 chr10 18947043 . AA AATA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1792 chr10 18957761 . tga tGAGga 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1793 chr10 18964064 . T TCGGCC 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1794 chr10 18971106 . A AGTTCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1795 chr10 18977780 . c cACT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1796 chr10 18978014 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 1797 chr10 18987004 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1798 chr10 18989113 . T TCCGTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1799 chr10 19026841 . T C 13.4 . DP=15;AF1=0.7303;CI95=0.5,1;DP4=1,0,3,0;MQ=48;PV4=1,1,0.13,1 PL:DP:SP:GT:GQ 42,0,2:4:0:0/1:3 | |
| 1800 chr10 19028243 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 1801 chr10 19042107 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1802 chr10 19042354 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 1803 chr10 19056702 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1804 chr10 19060843 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 1805 chr10 19077760 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1806 chr10 19080869 . TGAGA TGAGAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1807 chr10 19096008 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 1808 chr10 19100900 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1809 chr10 19131616 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 1810 chr10 19180434 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 1811 chr10 19210345 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 1812 chr10 19229495 . A C 7.8 . DP=10;AF1=0.5;CI95=0.5,0.5;DP4=1,1,1,1;MQ=49;PV4=1,0.27,0.019,0.093 PL:DP:SP:GT:GQ 37,0,40:4:0:0/1:38 | |
| 1813 chr10 19229645 . C G 13.2 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 1814 chr10 19229823 . C G 35.5 . DP=12;AF1=1;CI95=0.5,1;DP4=0,0,1,3;MQ=49 PL:DP:SP:GT:GQ 68,12,0:4:0:1/1:72 | |
| 1815 chr10 19244016 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1816 chr10 19249389 . T TCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1817 chr10 19263034 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1818 chr10 19299035 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1819 chr10 19317344 . acg a 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 1820 chr10 19317974 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 1821 chr10 19334499 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 1822 chr10 19336382 . ATCTT A 5.08 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 1823 chr10 19349710 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1824 chr10 19385077 . G GTATGT 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 1825 chr10 19390737 . a aGTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1826 chr10 19423931 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 1827 chr10 19428666 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1828 chr10 19432478 . gtatt g 7.35 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 1829 chr10 19460612 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1830 chr10 19463371 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1831 chr10 19486569 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1832 chr10 19493931 . AACA AA 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 1833 chr10 19497448 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 1834 chr10 19524658 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 1835 chr10 19543423 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 1836 chr10 19560960 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 1837 chr10 19577833 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1838 chr10 19578203 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1839 chr10 19583468 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1840 chr10 19591310 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 1841 chr10 19644716 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1842 chr10 19697320 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1843 chr10 19704811 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1844 chr10 19718354 . G A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 1845 chr10 19728593 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1846 chr10 19750343 . TC TCC 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 1847 chr10 19773776 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1848 chr10 19790992 . AA AAGTTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1849 chr10 19829280 . GTT GT 21.3 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=50 PL:DP:SP:GT:GQ 60,6,0:2:0:1/1:49 | |
| 1850 chr10 19835511 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1851 chr10 19848262 . aattttatt aatt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1852 chr10 19869278 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 1853 chr10 19880925 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1854 chr10 19904802 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1855 chr10 19910405 . aa aAATGa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1856 chr10 19918803 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1857 chr10 19921347 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 1858 chr10 19924031 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1859 chr10 19941396 . G A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 1860 chr10 19944969 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 1861 chr10 19971538 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1862 chr10 19976717 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1863 chr10 19986712 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1864 chr10 19989233 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 1865 chr10 19999233 . G GGAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1866 chr10 20009606 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1867 chr10 20023388 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 1868 chr10 20045435 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 1869 chr10 20054478 . T C 4.77 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1870 chr10 20110211 . C CGG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1871 chr10 20112399 . tc tCTAc 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1872 chr10 20115456 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1873 chr10 20116458 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1874 chr10 20125379 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1875 chr10 20126140 . AA AACCCTCTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1876 chr10 20127808 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1877 chr10 20137684 . TGT TGTCGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1878 chr10 20208943 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 1879 chr10 20210449 . C G 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,39:2:0:0/1:32 | |
| 1880 chr10 20211932 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1881 chr10 20226708 . T TGGACCA 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 1882 chr10 20228553 . T A 4.77 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1883 chr10 20243295 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 1884 chr10 20262112 . T TCCA 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 1885 chr10 20265480 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1886 chr10 20272712 . atg a 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 1887 chr10 20274557 . A ACC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1888 chr10 20277945 . tctca t 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1889 chr10 20319124 . aaaacaaacaaacaaacaa aAAACaaacaaacaaacaaacaa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1890 chr10 20321413 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1891 chr10 20333560 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1892 chr10 20383389 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1893 chr10 20404734 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 1894 chr10 20405302 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1895 chr10 20432605 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1896 chr10 20439819 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1897 chr10 20462018 . A AGCTG 12.7 . INDEL;DP=10;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1898 chr10 20462052 . A AGTCGTCT 5.8 . INDEL;DP=7;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 1899 chr10 20465904 . G C 3.59 . DP=4;AF1=0.51;CI95=0.5,0.5;DP4=1,0,2,0;MQ=47;PV4=1,0.17,0.29,0.17 PL:DP:SP:GT:GQ 31,0,14:3:0:0/1:17 | |
| 1900 chr10 20473105 . TA TAGGCAGGA 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=49 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 1901 chr10 20497540 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 1902 chr10 20504157 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1903 chr10 20504485 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 1904 chr10 20506418 . G A 99 . DP=51;AF1=0.5;CI95=0.5,0.5;DP4=13,16,16,2;MQ=49;PV4=0.0047,1.5e-06,5.4e-12,0.22 PL:DP:SP:GT:GQ 165,0,255:47:23:0/1:99 | |
| 1905 chr10 20510083 . TA TAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1906 chr10 20516587 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1907 chr10 20518955 . aa aAAAATACTCa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1908 chr10 20524436 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1909 chr10 20534333 . A G 99 . DP=35;AF1=1;CI95=1,1;DP4=0,0,15,6;MQ=43 PL:DP:SP:GT:GQ 255,63,0:21:0:1/1:99 | |
| 1910 chr10 20550111 . C T 3.54 . DP=2;AF1=0.5001;CI95=0.5,0.5;DP4=0,1,0,1;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,30:2:0:0/1:30 | |
| 1911 chr10 20562165 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 1912 chr10 20568524 . T C 58.3 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=46 PL:DP:SP:GT:GQ 91,15,0:5:0:1/1:75 | |
| 1913 chr10 20568782 . T TCGCTTCTGA 7.38 . INDEL;DP=9;AF1=0.504;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,18:2:0:0/1:21 | |
| 1914 chr10 20598818 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 1915 chr10 20599571 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1916 chr10 20621890 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1917 chr10 20637296 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 1918 chr10 20639841 . G A 12.3 . DP=5;AF1=0.5001;CI95=0.5,0.5;DP4=1,0,2,1;MQ=50;PV4=1,0.02,0.33,0.16 PL:DP:SP:GT:GQ 42,0,33:4:0:0/1:35 | |
| 1919 chr10 20674047 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 1920 chr10 20675860 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 1921 chr10 20684455 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 1922 chr10 20711320 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 1923 chr10 20755628 . G T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 1924 chr10 20756830 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 1925 chr10 20760810 . g gTATGATGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1926 chr10 20766020 . T G 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1927 chr10 20766038 . T G 4.77 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1928 chr10 20770858 . c cTAGAGGA 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 1929 chr10 20797406 . CAGGAAGGAAGG CAGGAAGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1930 chr10 20807853 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1931 chr10 20822284 . T C 6.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 1932 chr10 20834731 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1933 chr10 20844491 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 1934 chr10 20851823 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1935 chr10 20880974 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1936 chr10 20883391 . CT CTT 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 1937 chr10 20887389 . TC TCGTGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1938 chr10 20890984 . C G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 1939 chr10 20900146 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1940 chr10 20900159 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1941 chr10 20913983 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1942 chr10 20915017 . t tCC 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 1943 chr10 20932112 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 1944 chr10 20935454 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1945 chr10 20937463 . C T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 1946 chr10 20945249 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 1947 chr10 20994284 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 1948 chr10 21029708 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1949 chr10 21047484 . G T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 1950 chr10 21052247 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1951 chr10 21073521 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1952 chr10 21074158 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1953 chr10 21076100 . C A 60 . DP=11;AF1=0.5;CI95=0.5,0.5;DP4=2,0,8,0;MQ=48;PV4=1,0.0015,0.065,1 PL:DP:SP:GT:GQ 90,0,44:10:0:0/1:47 | |
| 1954 chr10 21102303 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 1955 chr10 21106620 . A G 85 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=0,8,0,6;MQ=47;PV4=1,0.0059,6.9e-06,1 PL:DP:SP:GT:GQ 115,0,195:14:0:0/1:99 | |
| 1956 chr10 21120116 . A G 99 . DP=24;AF1=1;CI95=1,1;DP4=1,0,20,0;MQ=46;PV4=1,0.24,0.15,1 PL:DP:SP:GT:GQ 138,31,0:21:0:1/1:99 | |
| 1957 chr10 21124090 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 1958 chr10 21129763 . C G 5.61 . DP=5;AF1=0.5262;CI95=0.5,1;DP4=0,1,0,2;MQ=49;PV4=1,1,0.33,0.031 PL:DP:SP:GT:GQ 34,0,10:3:0:0/1:13 | |
| 1959 chr10 21141469 . T C 45 . DP=11;AF1=1;CI95=1,1;DP4=0,0,7,1;MQ=50 PL:DP:SP:GT:GQ 78,24,0:8:0:1/1:96 | |
| 1960 chr10 21151628 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1961 chr10 21169450 . AT ATCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1962 chr10 21176945 . G A 9.53 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 1963 chr10 21178780 . A G 43 . DP=15;AF1=0.5001;CI95=0.5,0.5;DP4=1,1,5,0;MQ=48;PV4=0.29,0.3,0.081,1 PL:DP:SP:GT:GQ 73,0,33:7:0:0/1:36 | |
| 1964 chr10 21193048 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1965 chr10 21202052 . G T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 1966 chr10 21208638 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 1967 chr10 21215612 . T A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 1968 chr10 21251463 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 1969 chr10 21254282 . ct cTGt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1970 chr10 21259967 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 1971 chr10 21260045 . T TAGC 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 1972 chr10 21265465 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 1973 chr10 21267753 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 1974 chr10 21271757 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 1975 chr10 21273407 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 1976 chr10 21280034 . A C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 1977 chr10 21291853 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1978 chr10 21297323 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 1979 chr10 21300433 . T TTA 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 1980 chr10 21319349 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1981 chr10 21329419 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1982 chr10 21333519 . A T 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 1983 chr10 21355050 . T A 3.02 . DP=2;AF1=0.5023;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,20:2:0:0/1:23 | |
| 1984 chr10 21360298 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 1985 chr10 21361988 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1986 chr10 21366671 . TCCA T 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 1987 chr10 21406112 . a aGCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 1988 chr10 21406937 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 1989 chr10 21414892 . C G 42 . DP=26;AF1=0.5;CI95=0.5,0.5;DP4=2,14,0,9;MQ=49;PV4=0.52,7.5e-12,0.027,1 PL:DP:SP:GT:GQ 72,0,255:25:3:0/1:75 | |
| 1990 chr10 21435299 . C A 4.13 . DP=22;AF1=0.4998;CI95=0.5,0.5;DP4=0,7,0,3;MQ=48;PV4=1,0.22,0.011,1 PL:DP:SP:GT:GQ 32,0,115:10:0:0/1:35 | |
| 1991 chr10 21443125 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 1992 chr10 21453797 . C T 3.55 . DP=3;AF1=0.5011;CI95=0.5,0.5;DP4=0,1,0,2;MQ=49;PV4=1,0,1,1 PL:DP:SP:GT:GQ 31,0,23:3:0:0/1:25 | |
| 1993 chr10 21460947 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 1994 chr10 21482036 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 1995 chr10 21483638 . GT GTTATTTCCT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 1996 chr10 21497209 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 1997 chr10 21518542 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 1998 chr10 21518673 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 1999 chr10 21536143 . tc tCGc 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 2000 chr10 21536993 . A G 4.61 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=50 PL:DP:SP:GT:GQ 34,6,0:2:0:1/1:49 | |
| 2001 chr10 21540870 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2002 chr10 21552094 . C T 5.46 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,34:2:0:0/1:34 | |
| 2003 chr10 21579337 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 2004 chr10 21589687 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2005 chr10 21603523 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2006 chr10 21603799 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 2007 chr10 21616056 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2008 chr10 21634841 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2009 chr10 21675633 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2010 chr10 21680374 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2011 chr10 21689522 . G C 6.2 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,44:2:0:0/1:37 | |
| 2012 chr10 21692283 . taa tAAAAGGAGaa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2013 chr10 21709938 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2014 chr10 21722008 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 2015 chr10 21729734 . tttgaga t 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 2016 chr10 21735932 . A T 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2017 chr10 21741257 . A C 3.01 . DP=5;AF1=0.4998;CI95=0.5,0.5;DP4=1,1,3,0;MQ=48;PV4=0.4,0.1,0.17,0.027 PL:DP:SP:GT:GQ 30,0,37:5:0:0/1:32 | |
| 2018 chr10 21752528 . G C 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 2019 chr10 21758188 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2020 chr10 21769962 . a aGCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2021 chr10 21794668 . C CAATT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2022 chr10 21794799 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2023 chr10 21796772 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2024 chr10 21804510 . A ACT 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 2025 chr10 21820295 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2026 chr10 21836916 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2027 chr10 21860239 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2028 chr10 21863157 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2029 chr10 21873699 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2030 chr10 21884188 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2031 chr10 21887758 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2032 chr10 21890909 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2033 chr10 21915214 . C A 4.78 . DP=6;AF1=0.5024;CI95=0.5,0.5;DP4=0,2,0,2;MQ=49;PV4=1,1,0.21,1 PL:DP:SP:GT:GQ 33,0,20:4:0:0/1:23 | |
| 2034 chr10 21915636 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2035 chr10 21918962 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2036 chr10 21940577 . G T 3.54 . DP=14;AF1=0.4998;CI95=0.5,0.5;DP4=8,0,3,0;MQ=49;PV4=1,0.11,0.0014,1 PL:DP:SP:GT:GQ 31,0,152:11:0:0/1:34 | |
| 2037 chr10 21943547 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2038 chr10 21967093 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2039 chr10 21975235 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2040 chr10 21983628 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2041 chr10 22057889 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2042 chr10 22064702 . G A 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2043 chr10 22098891 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2044 chr10 22099742 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2045 chr10 22171185 . A C 6.98 . DP=18;AF1=0.4999;CI95=0.5,0.5;DP4=3,1,3,0;MQ=48;PV4=1,0.35,1,0.33 PL:DP:SP:GT:GQ 36,0,62:7:0:0/1:39 | |
| 2046 chr10 22177946 . G C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 2047 chr10 22193422 . T C 7.59 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 38,6,0:2:0:1/1:49 | |
| 2048 chr10 22197764 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 2049 chr10 22199279 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2050 chr10 22202226 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2051 chr10 22212556 . A G 8.44 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 39,6,0:2:0:1/1:49 | |
| 2052 chr10 22239952 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2053 chr10 22261452 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2054 chr10 22280753 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 2055 chr10 22330655 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2056 chr10 22332240 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2057 chr10 22342811 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 2058 chr10 22429243 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 2059 chr10 22447105 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2060 chr10 22463035 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2061 chr10 22491244 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2062 chr10 22499137 . CCT CCTGTTCTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2063 chr10 22516595 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2064 chr10 22527986 . G C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 2065 chr10 22533855 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2066 chr10 22547991 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2067 chr10 22559007 . T TTGTTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2068 chr10 22584162 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2069 chr10 22606472 . G GCTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2070 chr10 22607723 . G A 22 . DP=13;AF1=0.5;CI95=0.5,0.5;DP4=2,4,2,3;MQ=50;PV4=1,0.00012,0.15,1 PL:DP:SP:GT:GQ 52,0,201:11:0:0/1:55 | |
| 2071 chr10 22607892 . C G 25 . DP=20;AF1=0.5;CI95=0.5,0.5;DP4=4,10,5,0;MQ=49;PV4=0.011,3.9e-05,1.6e-06,0.12 PL:DP:SP:GT:GQ 55,0,255:19:20:0/1:58 | |
| 2072 chr10 22614274 . A T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 2073 chr10 22617134 . TAGA TAGAGA 5.09 . INDEL;DP=7;AF1=0.502;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,1,1,0.14 PL:DP:SP:GT:GQ 41,0,21:3:0:0/1:24 | |
| 2074 chr10 22617441 . A C 8.44 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 39,6,0:2:0:1/1:49 | |
| 2075 chr10 22629341 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2076 chr10 22629356 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2077 chr10 22631982 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2078 chr10 22633347 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2079 chr10 22635280 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2080 chr10 22638989 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2081 chr10 22645690 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2082 chr10 22653986 . TT TTGTGATGT 12.7 . INDEL;DP=7;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2083 chr10 22667053 . t tTCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2084 chr10 22690627 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2085 chr10 22705509 . T G 74 . DP=20;AF1=0.5;CI95=0.5,0.5;DP4=11,0,7,0;MQ=48;PV4=1,0.057,6.9e-06,0.16 PL:DP:SP:GT:GQ 104,0,194:18:0:0/1:99 | |
| 2086 chr10 22712946 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2087 chr10 22717274 . T G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 2088 chr10 22743353 . T TAG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 2089 chr10 22752001 . CT CTCTT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 2090 chr10 22779111 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2091 chr10 22788967 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2092 chr10 22806199 . C G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 2093 chr10 22817781 . T C 6.2 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,44:2:0:0/1:37 | |
| 2094 chr10 22825754 . C G 6.98 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2095 chr10 22830719 . G C 99 . DP=39;AF1=1;CI95=1,1;DP4=1,1,20,9;MQ=47;PV4=1,0.2,0.16,1 PL:DP:SP:GT:GQ 245,33,0:31:0:1/1:99 | |
| 2096 chr10 22830857 . G A 99 . DP=30;AF1=0.5;CI95=0.5,0.5;DP4=1,7,8,10;MQ=47;PV4=0.19,2.4e-05,2.9e-06,1 PL:DP:SP:GT:GQ 255,0,189:26:7:0/1:99 | |
| 2097 chr10 22832615 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2098 chr10 22841744 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2099 chr10 22863028 . CAAAAAAAA CAAAAA 8.83 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 47,6,0:2:0:1/1:49 | |
| 2100 chr10 22865740 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2101 chr10 22872669 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 2102 chr10 22888321 . t tA 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 2103 chr10 22898553 . T G 3.01 . DP=16;AF1=0.4997;CI95=0.5,0.5;DP4=7,0,3,0;MQ=49;PV4=1,0.19,0.035,0.38 PL:DP:SP:GT:GQ 30,0,119:10:0:0/1:33 | |
| 2104 chr10 22904774 . AGG AGGGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2105 chr10 22911142 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2106 chr10 22911289 . G C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 2107 chr10 22918282 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2108 chr10 22934768 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2109 chr10 22946287 . A T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 2110 chr10 22946899 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2111 chr10 22953816 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2112 chr10 22980532 . TTCT TTCTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2113 chr10 22995537 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2114 chr10 22999332 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2115 chr10 22999914 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2116 chr10 23004151 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 2117 chr10 23004262 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2118 chr10 23010065 . tgc tGCGGgc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2119 chr10 23013752 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2120 chr10 23028036 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2121 chr10 23040005 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2122 chr10 23066196 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2123 chr10 23088293 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2124 chr10 23095804 . TA TATGTAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2125 chr10 23102119 . g gTTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2126 chr10 23129007 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2127 chr10 23133684 . T A 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2128 chr10 23150602 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2129 chr10 23153073 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2130 chr10 23162476 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 2131 chr10 23200714 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2132 chr10 23220306 . G T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2133 chr10 23231028 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 2134 chr10 23232546 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 2135 chr10 23248345 . GA GACCA 5.08 . INDEL;DP=7;AF1=0.5;CI95=0.5,0.5;DP4=1,1,1,0;MQ=50;PV4=1,1,1,0.44 PL:DP:SP:GT:GQ 41,0,40:3:0:0/1:40 | |
| 2136 chr10 23252635 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2137 chr10 23279616 . CA CACTAAAA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 2138 chr10 23287051 . C T 11.3 . DP=10;AF1=0.5;CI95=0.5,0.5;DP4=5,0,5,0;MQ=50;PV4=1,0.00048,0.17,1 PL:DP:SP:GT:GQ 41,0,137:10:0:0/1:44 | |
| 2139 chr10 23287289 . T A 11.3 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=4,11,5,0;MQ=48;PV4=0.0081,0.0041,6.2e-05,1 PL:DP:SP:GT:GQ 41,0,255:20:21:0/1:44 | |
| 2140 chr10 23292145 . G T 6.26 . DP=6;AF1=0.5101;CI95=0.5,0.5;DP4=1,0,2,0;MQ=48;PV4=1,1,0.17,0.27 PL:DP:SP:GT:GQ 35,0,14:3:0:0/1:17 | |
| 2141 chr10 23297792 . C G 3.01 . DP=11;AF1=0.4997;CI95=0.5,0.5;DP4=2,2,0,3;MQ=48;PV4=0.43,0.078,0.0061,1 PL:DP:SP:GT:GQ 30,0,134:7:4:0/1:33 | |
| 2142 chr10 23301542 . T C 41.5 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,1,3;MQ=49 PL:DP:SP:GT:GQ 74,12,0:4:0:1/1:72 | |
| 2143 chr10 23308514 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2144 chr10 23324696 . T TTGAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2145 chr10 23346211 . G A 6.79 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=27 PL:DP:SP:GT:GQ 37,6,0:2:0:1/1:49 | |
| 2146 chr10 23356820 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2147 chr10 23360023 . C G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 2148 chr10 23383928 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2149 chr10 23389967 . a aTG 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 2150 chr10 23408139 . A G 7.77 . DP=10;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=49 PL:DP:SP:GT:GQ 39,9,0:3:0:1/1:63 | |
| 2151 chr10 23420123 . gga g 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 2152 chr10 23427139 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2153 chr10 23449426 . at aTAGATGt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2154 chr10 23474441 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 2155 chr10 23502227 . T C 24.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=46 PL:DP:SP:GT:GQ 56,6,0:2:0:1/1:49 | |
| 2156 chr10 23504261 . t tTCTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2157 chr10 23515156 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 2158 chr10 23546353 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2159 chr10 23564644 . C A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 2160 chr10 23566963 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2161 chr10 23583234 . T G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 2162 chr10 23583819 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2163 chr10 23585543 . C G 10.4 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 2164 chr10 23585674 . tgaagaa tgaa 7.35 . INDEL;DP=4;AF1=0.5006;CI95=0.5,0.5;DP4=0,1,0,1;MQ=42;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,26:2:0:0/1:29 | |
| 2165 chr10 23591892 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 2166 chr10 23608862 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2167 chr10 23620706 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 2168 chr10 23706373 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 2169 chr10 23755979 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2170 chr10 23772494 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2171 chr10 23774309 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2172 chr10 23835689 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2173 chr10 23849609 . A G 40.2 . DP=3;AF1=0.5207;CI95=0.5,1;DP4=1,0,2,0;MQ=45;PV4=1,1,0,1 PL:DP:SP:GT:GQ 70,0,11:3:0:0/1:14 | |
| 2174 chr10 23851077 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 2175 chr10 23866099 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2176 chr10 23867937 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2177 chr10 23869891 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2178 chr10 23872048 . C G 6.2 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,44:2:0:0/1:37 | |
| 2179 chr10 23888613 . gtac g 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 2180 chr10 23895093 . CT CTT 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 2181 chr10 23904002 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2182 chr10 23919028 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2183 chr10 23949274 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 2184 chr10 23952820 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 2185 chr10 23955412 . t tTGTCAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2186 chr10 23969116 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2187 chr10 24024647 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 2188 chr10 24025321 . tgccgcc t 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2189 chr10 24028418 . g gAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2190 chr10 24043432 . TTC TTCCACCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2191 chr10 24082357 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2192 chr10 24114759 . a aGCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2193 chr10 24146129 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 2194 chr10 24180652 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2195 chr10 24180894 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2196 chr10 24196497 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2197 chr10 24230887 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2198 chr10 24238020 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2199 chr10 24262763 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 2200 chr10 24275709 . TACACAC TACAC 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 2201 chr10 24318665 . T C 6.02 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 36,6,0:2:0:1/1:49 | |
| 2202 chr10 24329963 . G A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 2203 chr10 24368680 . C G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 2204 chr10 24377065 . T TAGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2205 chr10 24384662 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2206 chr10 24384691 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2207 chr10 24404523 . C G 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=46 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2208 chr10 24421539 . gctc gc 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 2209 chr10 24429628 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2210 chr10 24429636 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2211 chr10 24430556 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2212 chr10 24443536 . a aAG 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 2213 chr10 24446845 . G GA 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 2214 chr10 24458590 . G A 6.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2215 chr10 24459511 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2216 chr10 24459981 . A AGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2217 chr10 24474013 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2218 chr10 24482673 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 2219 chr10 24496210 . C CGGCCGGGGGCCAG 3.66 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=37 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 2220 chr10 24502192 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2221 chr10 24534237 . C A 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 2222 chr10 24542907 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2223 chr10 24602232 . A T 8.65 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 2224 chr10 24624059 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 2225 chr10 24628820 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2226 chr10 24630405 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2227 chr10 24662302 . T C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 2228 chr10 24669747 . C T 40 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=9,0,6,0;MQ=49;PV4=1,0.012,0.16,1 PL:DP:SP:GT:GQ 70,0,180:15:0:0/1:73 | |
| 2229 chr10 24669923 . T C 6.2 . DP=29;AF1=0.4999;CI95=0.5,0.5;DP4=14,2,0,5;MQ=49;PV4=0.001,0.00016,1.3e-05,1 PL:DP:SP:GT:GQ 35,0,255:21:30:0/1:38 | |
| 2230 chr10 24718655 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2231 chr10 24721946 . A C 29 . DP=26;AF1=0.5;CI95=0.5,0.5;DP4=11,5,5,1;MQ=49;PV4=0.63,6.3e-05,0.0046,1 PL:DP:SP:GT:GQ 59,0,255:22:2:0/1:62 | |
| 2232 chr10 24746942 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2233 chr10 24764349 . A AAAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2234 chr10 24774590 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 2235 chr10 24779346 . TTC TTCTC 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 2236 chr10 24780127 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2237 chr10 24786291 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 2238 chr10 24789907 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2239 chr10 24795214 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2240 chr10 24798403 . A C 4.77 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2241 chr10 24810855 . GGAG GGAGAG 6.55 . INDEL;DP=5;AF1=0.5001;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 43,0,35:2:0:0/1:37 | |
| 2242 chr10 24823442 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2243 chr10 24832841 . C A 18.1 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=5,2,0,4;MQ=48;PV4=0.061,0.094,2.6e-05,1 PL:DP:SP:GT:GQ 48,0,164:11:12:0/1:51 | |
| 2244 chr10 24832885 . C T 38 . DP=28;AF1=0.5003;CI95=0.5,0.5;DP4=0,1,5,1;MQ=49;PV4=0.29,0.00035,0.29,0.27 PL:DP:SP:GT:GQ 68,0,29:7:0:0/1:32 | |
| 2245 chr10 24833137 . C T 22 . DP=20;AF1=1;CI95=0.5,1;DP4=0,0,1,2;MQ=49 PL:DP:SP:GT:GQ 54,9,0:3:0:1/1:63 | |
| 2246 chr10 24834544 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2247 chr10 24837603 . G T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 2248 chr10 24861392 . A T 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,36:2:0:0/1:34 | |
| 2249 chr10 24882324 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2250 chr10 24889901 . T G 62 . DP=24;AF1=0.5;CI95=0.5,0.5;DP4=0,13,0,10;MQ=49;PV4=1,4.2e-12,1.6e-05,0.3 PL:DP:SP:GT:GQ 92,0,230:23:0:0/1:95 | |
| 2251 chr10 24896803 . C A 9.31 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=45 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 2252 chr10 24905997 . A T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 2253 chr10 24909096 . T TTCTA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2254 chr10 24909254 . G C 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2255 chr10 24923981 . A T,C 10.2 . DP=10;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=45 PL:DP:SP:GT:GQ 54,19,39,13,0,39:3:0:1/1:49 | |
| 2256 chr10 24952474 . tt tTTTGt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2257 chr10 24970120 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2258 chr10 25006412 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2259 chr10 25009535 . G A 6.99 . DP=2;AF1=0.5009;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,24:2:0:0/1:27 | |
| 2260 chr10 25019558 . G GAATT 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=1,1,1,0;MQ=50;PV4=1,0.034,1,0.016 PL:DP:SP:GT:GQ 41,0,91:3:0:0/1:44 | |
| 2261 chr10 25033511 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2262 chr10 25086645 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2263 chr10 25090550 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2264 chr10 25106173 . A C 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,0,1;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 2265 chr10 25140737 . C T 10.2 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=49 PL:DP:SP:GT:GQ 41,6,0:2:0:1/1:49 | |
| 2266 chr10 25148988 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2267 chr10 25184959 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2268 chr10 25187786 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2269 chr10 25221887 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2270 chr10 25232470 . Att ATTGCtt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2271 chr10 25249033 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2272 chr10 25249039 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2273 chr10 25251526 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2274 chr10 25256807 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2275 chr10 25281408 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2276 chr10 25289379 . tc tCCGTGTTAc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2277 chr10 25313818 . C T 10.4 . DP=20;AF1=0.5;CI95=0.5,0.5;DP4=3,8,0,4;MQ=49;PV4=0.52,0.0006,0.004,0.34 PL:DP:SP:GT:GQ 40,0,255:15:3:0/1:43 | |
| 2278 chr10 25315305 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 2279 chr10 25332474 . gt gTATt 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 2280 chr10 25335382 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 2281 chr10 25339668 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 2282 chr10 25353007 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2283 chr10 25353009 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2284 chr10 25362951 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2285 chr10 25368059 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 2286 chr10 25406561 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2287 chr10 25414229 . C T 5.46 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,44:2:0:0/1:37 | |
| 2288 chr10 25465309 . G A 25 . DP=5;AF1=0.5001;CI95=0.5,0.5;DP4=0,1,0,4;MQ=48;PV4=1,0.001,0.29,0.49 PL:DP:SP:GT:GQ 55,0,35:5:0:0/1:38 | |
| 2289 chr10 25528303 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2290 chr10 25550306 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2291 chr10 25566550 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2292 chr10 25566984 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2293 chr10 25572585 . ac aCAATGCc 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2294 chr10 25584300 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 2295 chr10 25589603 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2296 chr10 25617227 . G T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2297 chr10 25619042 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2298 chr10 25629866 . t tACC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2299 chr10 25636120 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2300 chr10 25663252 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2301 chr10 25716081 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2302 chr10 25725307 . G T 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 2303 chr10 25745066 . A AGCT 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2304 chr10 25785427 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2305 chr10 25790844 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2306 chr10 25791843 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2307 chr10 25793560 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 2308 chr10 25843076 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2309 chr10 25849554 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2310 chr10 25870572 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2311 chr10 25888180 . A G 36.5 . DP=28;AF1=1;CI95=0.5,1;DP4=0,0,3,1;MQ=50 PL:DP:SP:GT:GQ 69,12,0:4:0:1/1:72 | |
| 2312 chr10 25896275 . G C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 2313 chr10 25903308 . caa c 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 2314 chr10 25916072 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2315 chr10 25938148 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2316 chr10 25938172 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2317 chr10 25941295 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 2318 chr10 25959202 . C G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 2319 chr10 25970337 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2320 chr10 25980120 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 2321 chr10 25989836 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2322 chr10 25998967 . T G 12.3 . DP=4;AF1=0.501;CI95=0.5,0.5;DP4=2,0,2,0;MQ=48;PV4=1,1,0.019,1 PL:DP:SP:GT:GQ 42,0,24:4:0:0/1:27 | |
| 2323 chr10 26016091 . a aCCGGAGAAGATTTAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2324 chr10 26018632 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2325 chr10 26024217 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 2326 chr10 26034419 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2327 chr10 26123241 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2328 chr10 26131425 . T TGTTCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2329 chr10 26143023 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2330 chr10 26165157 . C A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 2331 chr10 26171685 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 2332 chr10 26190824 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2333 chr10 26197168 . a aTTGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2334 chr10 26243851 . T A 12.3 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=2,8,5,0;MQ=49;PV4=0.007,0.0027,3.6e-05,1 PL:DP:SP:GT:GQ 42,0,231:15:22:0/1:45 | |
| 2335 chr10 26244987 . aga aGAACga 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 2336 chr10 26270031 . G T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 2337 chr10 26276387 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2338 chr10 26298445 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2339 chr10 26324854 . A G 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 2340 chr10 26329414 . g gACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2341 chr10 26355906 . G A 40 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=8,0,6,0;MQ=49;PV4=1,0.00011,0.019,1 PL:DP:SP:GT:GQ 70,0,191:14:0:0/1:73 | |
| 2342 chr10 26356028 . T G 3.03 . DP=4;AF1=0.5037;CI95=0.5,0.5;DP4=0,1,0,3;MQ=44;PV4=1,0.074,1,1 PL:DP:SP:GT:GQ 30,0,18:4:0:0/1:21 | |
| 2343 chr10 26357652 . CA CAAAA 7.69 . INDEL;DP=8;AF1=0.5554;CI95=0.5,1;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,7:2:0:0/1:10 | |
| 2344 chr10 26357748 . G A 99 . DP=25;AF1=0.5163;CI95=0.5,1;DP4=0,4,6,7;MQ=46;PV4=0.24,1,0.00038,0.41 PL:DP:SP:GT:GQ 221,0,12:17:6:0/1:15 | |
| 2345 chr10 26359200 . TAA TAAA 32.5 . INDEL;DP=15;AF1=0.5;CI95=0.5,0.5;DP4=7,2,2,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 70,0,149:12:0:0/1:73 | |
| 2346 chr10 26364906 . A C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 2347 chr10 26372429 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2348 chr10 26411440 . C A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 2349 chr10 26414549 . TACA T 6.68 . INDEL;DP=6;AF1=0.5207;CI95=0.5,1;DP4=0,1,0,1;MQ=39;PV4=1,1,1,1 PL:DP:SP:GT:GQ 43,0,11:2:0:0/1:14 | |
| 2350 chr10 26430776 . TT TTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2351 chr10 26436298 . tgaggaggaggagga tgaggaggagga 99 . INDEL;DP=12;AF1=0.5;CI95=0.5,0.5;DP4=4,0,7,0;MQ=49;PV4=1,0.0043,0.24,0.31 PL:DP:SP:GT:GQ 168,0,127:11:0:0/1:99 | |
| 2352 chr10 26442808 . G C 10.4 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=3,1,2,0;MQ=49;PV4=1,0.45,0.089,0.21 PL:DP:SP:GT:GQ 40,0,90:6:0:0/1:43 | |
| 2353 chr10 26452905 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2354 chr10 26453576 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2355 chr10 26453672 . G A 3.54 . DP=3;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,43:2:0:0/1:34 | |
| 2356 chr10 26456082 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 2357 chr10 26463130 . C A 99 . DP=33;AF1=0.5;CI95=0.5,0.5;DP4=7,6,8,7;MQ=49;PV4=1,3.4e-16,0.024,1 PL:DP:SP:GT:GQ 161,0,255:28:0:0/1:99 | |
| 2358 chr10 26463497 . A C 3.02 . DP=4;AF1=0.5023;CI95=0.5,0.5;DP4=0,1,1,1;MQ=47;PV4=1,0.085,0.41,1 PL:DP:SP:GT:GQ 30,0,20:3:0:0/1:23 | |
| 2359 chr10 26463503 . A C 6.79 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 37,6,0:2:0:1/1:49 | |
| 2360 chr10 26463507 . A G 9.31 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 2361 chr10 26488859 . G T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2362 chr10 26498768 . aa aAGa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2363 chr10 26507876 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2364 chr10 26510719 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2365 chr10 26515206 . T G 12 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=49 PL:DP:SP:GT:GQ 43,6,0:2:0:1/1:49 | |
| 2366 chr10 26515847 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2367 chr10 26518977 . cac cACAAac 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2368 chr10 26522075 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2369 chr10 26533005 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2370 chr10 26534973 . T C 5.29 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 35,6,0:2:0:1/1:49 | |
| 2371 chr10 26537888 . GGA GGAAGA 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 2372 chr10 26543891 . A T 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 2373 chr10 26548423 . G C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 2374 chr10 26552501 . A T 6.2 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,44:2:0:0/1:37 | |
| 2375 chr10 26562650 . T G 8.64 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=1,6,0,3;MQ=49;PV4=1,0.37,0.0055,1 PL:DP:SP:GT:GQ 38,0,122:10:0:0/1:41 | |
| 2376 chr10 26568858 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2377 chr10 26605723 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2378 chr10 26622687 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2379 chr10 26624974 . T G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 2380 chr10 26640192 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2381 chr10 26653312 . c cACCGACCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2382 chr10 26662412 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 2383 chr10 26695018 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2384 chr10 26702623 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2385 chr10 26702636 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2386 chr10 26714669 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2387 chr10 26733201 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2388 chr10 26733591 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 2389 chr10 26734822 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 2390 chr10 26746861 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 2391 chr10 26754240 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 2392 chr10 26771457 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2393 chr10 26774062 . T TTTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2394 chr10 26779576 . a aCCACGATCTCACAGTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2395 chr10 26781388 . G A 27 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=0,11,0,6;MQ=49;PV4=1,3.5e-05,0.022,0.022 PL:DP:SP:GT:GQ 57,0,216:17:0:0/1:60 | |
| 2396 chr10 26785189 . G A 24 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=5,0,5,0;MQ=49;PV4=1,0.0026,0.17,1 PL:DP:SP:GT:GQ 54,0,137:10:0:0/1:57 | |
| 2397 chr10 26799979 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2398 chr10 26800317 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2399 chr10 26802662 . AAG A 53.5 . INDEL;DP=11;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,4;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 91,0,46:6:0:0/1:49 | |
| 2400 chr10 26814020 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2401 chr10 26821706 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2402 chr10 26825237 . CT CTAT 3.25 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,1;MQ=50;PV4=1,1,1,0.4 PL:DP:SP:GT:GQ 38,0,100:4:0:0/1:41 | |
| 2403 chr10 26844111 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2404 chr10 26847543 . tta tTAta 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2405 chr10 26849088 . A G 95 . DP=66;AF1=0.5;CI95=0.5,0.5;DP4=18,16,12,16;MQ=50;PV4=0.46,4.1e-25,0.038,1 PL:DP:SP:GT:GQ 125,0,255:62:3:0/1:99 | |
| 2406 chr10 26851302 . ACAC ACACCAC 7.35 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 2407 chr10 26856514 . A G 3.54 . DP=14;AF1=0.4998;CI95=0.5,0.5;DP4=0,3,0,2;MQ=49;PV4=1,0.11,0.056,0.29 PL:DP:SP:GT:GQ 31,0,95:5:0:0/1:34 | |
| 2408 chr10 26946700 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2409 chr10 26947862 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2410 chr10 26970481 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2411 chr10 26991324 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 2412 chr10 26994234 . G C 34 . DP=7;AF1=0.5003;CI95=0.5,0.5;DP4=1,0,4,0;MQ=48;PV4=1,0.016,0.18,0.066 PL:DP:SP:GT:GQ 64,0,29:5:0:0/1:32 | |
| 2413 chr10 26994253 . GTG GTGTTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2414 chr10 27009334 . A G 99 . DP=26;AF1=1;CI95=1,1;DP4=0,0,0,22;MQ=48 PL:DP:SP:GT:GQ 141,66,0:22:0:1/1:99 | |
| 2415 chr10 27012422 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2416 chr10 27014085 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 2417 chr10 27031548 . C T 15.1 . DP=4;AF1=0.5001;CI95=0.5,0.5;DP4=0,1,0,3;MQ=49;PV4=1,0.0015,0.092,0.37 PL:DP:SP:GT:GQ 45,0,35:4:0:0/1:38 | |
| 2418 chr10 27065942 . A T 4.79 . DP=8;AF1=0.503;CI95=0.5,0.5;DP4=1,0,2,0;MQ=48;PV4=1,0.3,0.41,1 PL:DP:SP:GT:GQ 33,0,19:3:0:0/1:22 | |
| 2419 chr10 27065976 . G A 32 . DP=24;AF1=0.5;CI95=0.5,0.5;DP4=14,2,7,0;MQ=49;PV4=1,0.0018,0.025,1 PL:DP:SP:GT:GQ 62,0,255:23:0:0/1:65 | |
| 2420 chr10 27076212 . T TTTACAGTCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2421 chr10 27094189 . AG AGTAACACG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2422 chr10 27099874 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2423 chr10 27103298 . at aTCTAGt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2424 chr10 27112267 . T A 16.1 . DP=11;AF1=0.5006;CI95=0.5,0.5;DP4=0,2,0,4;MQ=47;PV4=1,1,0.086,1 PL:DP:SP:GT:GQ 46,0,26:6:0:0/1:29 | |
| 2425 chr10 27127020 . t tGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2426 chr10 27152738 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2427 chr10 27158688 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2428 chr10 27284989 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2429 chr10 27288645 . C A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 2430 chr10 27291704 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2431 chr10 27303661 . A G 39 . DP=10;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,5;MQ=46;PV4=1,0.067,0.15,1 PL:DP:SP:GT:GQ 69,0,73:8:0:0/1:71 | |
| 2432 chr10 27303694 . T C 36 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,4;MQ=47;PV4=1,0.052,0.015,0.44 PL:DP:SP:GT:GQ 66,0,115:8:0:0/1:69 | |
| 2433 chr10 27319163 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2434 chr10 27322311 . T C 39.5 . DP=10;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=46 PL:DP:SP:GT:GQ 72,12,0:4:0:1/1:72 | |
| 2435 chr10 27333120 . CT CTCATGCTT 3.25 . INDEL;DP=6;AF1=0.5;CI95=0.5,0.5;DP4=3,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,65:4:0:0/1:41 | |
| 2436 chr10 27335259 . A G 17.5 . DP=8;AF1=0.5554;CI95=0.5,1;DP4=1,0,3,0;MQ=49;PV4=1,1,0.17,1 PL:DP:SP:GT:GQ 47,0,7:4:0:0/1:10 | |
| 2437 chr10 27350185 . CATAATAA CATAA 99 . INDEL;DP=6;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,4;MQ=50;PV4=1,0.00077,1,1 PL:DP:SP:GT:GQ 138,0,74:6:0:0/1:77 | |
| 2438 chr10 27360686 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 2439 chr10 27363846 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2440 chr10 27366677 . TAAAA TA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2441 chr10 27382944 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2442 chr10 27400891 . A G 4.13 . DP=12;AF1=0.4998;CI95=0.5,0.5;DP4=8,2,1,1;MQ=49;PV4=0.45,0.019,4.4e-09,0.45 PL:DP:SP:GT:GQ 32,0,255:12:3:0/1:35 | |
| 2443 chr10 27405096 . A G 38 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=10,1,4,1;MQ=49;PV4=1,0.0018,0.0067,1 PL:DP:SP:GT:GQ 68,0,246:16:0:0/1:71 | |
| 2444 chr10 27409555 . G A 37.5 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=49 PL:DP:SP:GT:GQ 70,12,0:4:0:1/1:72 | |
| 2445 chr10 27423744 . T C 42 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=8,2,5,3;MQ=49;PV4=0.61,4.2e-09,1,0.33 PL:DP:SP:GT:GQ 72,0,255:18:2:0/1:75 | |
| 2446 chr10 27428114 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2447 chr10 27434483 . G A 7.8 . DP=28;AF1=0.5;CI95=0.5,0.5;DP4=7,8,3,2;MQ=49;PV4=1,2.1e-05,0.15,0.21 PL:DP:SP:GT:GQ 37,0,255:20:0:0/1:40 | |
| 2448 chr10 27454111 . A T 40 . DP=20;AF1=0.5;CI95=0.5,0.5;DP4=0,13,0,7;MQ=49;PV4=1,2.8e-08,0.0056,1 PL:DP:SP:GT:GQ 70,0,231:20:0:0/1:73 | |
| 2449 chr10 27456003 . G A 17.1 . DP=24;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=49 PL:DP:SP:GT:GQ 49,9,0:3:0:1/1:63 | |
| 2450 chr10 27457969 . aga aGATTGTTga 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2451 chr10 27459376 . C T 3.54 . DP=14;AF1=0.4998;CI95=0.5,0.5;DP4=8,0,0,4;MQ=50;PV4=0.002,0.013,0.083,1 PL:DP:SP:GT:GQ 31,0,171:12:27:0/1:34 | |
| 2452 chr10 27462005 . G A 8.64 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=4,0,3,0;MQ=49;PV4=1,0.051,0.045,1 PL:DP:SP:GT:GQ 38,0,102:7:0:0/1:41 | |
| 2453 chr10 27486339 . T A 6.2 . DP=5;AF1=0.5001;CI95=0.5,0.5;DP4=0,1,2,0;MQ=49;PV4=0.33,0.064,0.23,0.061 PL:DP:SP:GT:GQ 35,0,32:3:0:0/1:33 | |
| 2454 chr10 27487348 . G A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 2455 chr10 27491535 . GAAGTAA GAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2456 chr10 27494126 . C CGT 7.35 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,41:2:0:0/1:42 | |
| 2457 chr10 27499771 . G A 99 . DP=42;AF1=0.5;CI95=0.5,0.5;DP4=12,11,15,3;MQ=47;PV4=0.051,0.00013,6.9e-27,1 PL:DP:SP:GT:GQ 255,0,255:41:13:0/1:99 | |
| 2458 chr10 27499804 . T C 68 . DP=55;AF1=0.5;CI95=0.5,0.5;DP4=25,11,13,5;MQ=49;PV4=1,1.7e-17,5.5e-05,1 PL:DP:SP:GT:GQ 98,0,255:54:0:0/1:99 | |
| 2459 chr10 27506854 . C T 10.2 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 41,6,0:2:0:1/1:49 | |
| 2460 chr10 27507119 . C T 68 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,8;MQ=48;PV4=1,0.14,0.013,1 PL:DP:SP:GT:GQ 98,0,72:12:0:0/1:75 | |
| 2461 chr10 27508600 . A G 70 . DP=28;AF1=0.5;CI95=0.5,0.5;DP4=19,0,8,0;MQ=48;PV4=1,3e-06,8.9e-15,1 PL:DP:SP:GT:GQ 100,0,239:27:0:0/1:99 | |
| 2462 chr10 27508621 . C T 63 . DP=32;AF1=0.5;CI95=0.5,0.5;DP4=21,1,8,0;MQ=48;PV4=1,2.3e-08,7.9e-11,0.32 PL:DP:SP:GT:GQ 93,0,255:30:0:0/1:96 | |
| 2463 chr10 27510210 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2464 chr10 27515371 . TACAGAC TAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2465 chr10 27516441 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2466 chr10 27520829 . T C 14.2 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=0,5,0,3;MQ=49;PV4=1,0.0041,0.024,1 PL:DP:SP:GT:GQ 44,0,151:8:0:0/1:47 | |
| 2467 chr10 27536428 . T C 99 . DP=14;AF1=1;CI95=1,1;DP4=0,0,8,6;MQ=32 PL:DP:SP:GT:GQ 255,42,0:14:0:1/1:99 | |
| 2468 chr10 27538176 . G A 16.1 . DP=65;AF1=0.5;CI95=0.5,0.5;DP4=15,19,6,13;MQ=18;PV4=0.4,2e-16,0.00092,1 PL:DP:SP:GT:GQ 46,0,164:53:4:0/1:49 | |
| 2469 chr10 27540665 . C A 6.98 . DP=16;AF1=0.4999;CI95=0.5,0.5;DP4=3,1,0,4;MQ=50;PV4=0.14,0.065,0.18,1 PL:DP:SP:GT:GQ 36,0,88:8:8:0/1:39 | |
| 2470 chr10 27577568 . G A 33 . DP=10;AF1=0.5;CI95=0.5,0.5;DP4=2,0,6,0;MQ=49;PV4=1,0.048,0.31,1 PL:DP:SP:GT:GQ 63,0,40:8:0:0/1:43 | |
| 2471 chr10 27577683 . A G 3.54 . DP=5;AF1=0.4998;CI95=0.5,0.5;DP4=2,1,0,1;MQ=48;PV4=1,1,0,0.27 PL:DP:SP:GT:GQ 31,0,105:4:0:0/1:34 | |
| 2472 chr10 27613138 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2473 chr10 27629880 . T C 3.41 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=36 PL:DP:SP:GT:GQ 32,6,0:2:0:1/1:49 | |
| 2474 chr10 27630044 . C A 3.01 . DP=3;AF1=0.4998;CI95=0.5,0.5;DP4=2,0,1,0;MQ=34;PV4=1,1,1,0.037 PL:DP:SP:GT:GQ 30,0,44:3:0:0/1:33 | |
| 2475 chr10 27643882 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2476 chr10 27646413 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2477 chr10 27657084 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2478 chr10 27677437 . aatat aat 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 2479 chr10 27687775 . T C 20 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=2,2,4,0;MQ=49;PV4=0.43,0.0082,0.03,1 PL:DP:SP:GT:GQ 50,0,140:8:4:0/1:53 | |
| 2480 chr10 27687965 . A G 99 . DP=30;AF1=0.5;CI95=0.5,0.5;DP4=3,4,10,7;MQ=45;PV4=0.66,0.098,1.9e-07,0.41 PL:DP:SP:GT:GQ 255,0,174:24:2:0/1:99 | |
| 2481 chr10 27688109 . T C 6.98 . DP=42;AF1=0.4999;CI95=0.5,0.5;DP4=7,10,2,4;MQ=49;PV4=1,3.8e-07,0.41,1 PL:DP:SP:GT:GQ 36,0,255:23:0:0/1:39 | |
| 2482 chr10 27692099 . A G 65 . DP=20;AF1=0.5;CI95=0.5,0.5;DP4=9,0,7,0;MQ=48;PV4=1,2.1e-09,0.0012,1 PL:DP:SP:GT:GQ 95,0,207:16:0:0/1:98 | |
| 2483 chr10 27692371 . T G 33 . DP=11;AF1=0.5;CI95=0.5,0.5;DP4=1,5,1,4;MQ=49;PV4=1,0.0008,0.49,1 PL:DP:SP:GT:GQ 63,0,172:11:0:0/1:66 | |
| 2484 chr10 27702415 . G T 3.01 . DP=8;AF1=0.4997;CI95=0.5,0.5;DP4=0,5,0,2;MQ=48;PV4=1,0.27,0.26,0.11 PL:DP:SP:GT:GQ 30,0,108:7:0:0/1:33 | |
| 2485 chr10 27714803 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2486 chr10 27715096 . G C 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 2487 chr10 27715228 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2488 chr10 27745891 . tt tTGACt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2489 chr10 27758656 . A T 5.52 . DP=2;AF1=0.5101;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,14:2:0:0/1:17 | |
| 2490 chr10 27772793 . T C 9.31 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 2491 chr10 27802359 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2492 chr10 27808606 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2493 chr10 27821395 . A G 56 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=4,0,5,0;MQ=46;PV4=1,0.0074,0.0077,0.31 PL:DP:SP:GT:GQ 86,0,119:9:0:0/1:89 | |
| 2494 chr10 27823423 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2495 chr10 27826229 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2496 chr10 27891177 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 2497 chr10 27891268 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2498 chr10 27903635 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2499 chr10 27904423 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2500 chr10 27920550 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2501 chr10 27946635 . C A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 2502 chr10 27948965 . CT CTCAGCTCTAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2503 chr10 27966044 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2504 chr10 27969594 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 2505 chr10 27985337 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 2506 chr10 27993359 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2507 chr10 27998723 . TG TGGACGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2508 chr10 27999882 . T A 3.66 . DP=2;AF1=0.5261;CI95=0.5,1;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,10:2:0:0/1:13 | |
| 2509 chr10 28034185 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2510 chr10 28035753 . G GCTCGATAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2511 chr10 28043275 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2512 chr10 28056413 . A T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 2513 chr10 28057063 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 2514 chr10 28064456 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 2515 chr10 28066306 . ag aGg 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 2516 chr10 28071405 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2517 chr10 28073623 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2518 chr10 28109684 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2519 chr10 28133742 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2520 chr10 28153538 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2521 chr10 28158135 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2522 chr10 28158338 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2523 chr10 28165869 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 2524 chr10 28184736 . C A 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2525 chr10 28221000 . A T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 2526 chr10 28223886 . A C 10.4 . DP=22;AF1=0.5005;CI95=0.5,0.5;DP4=3,0,4,0;MQ=49;PV4=1,1,0.14,1 PL:DP:SP:GT:GQ 40,0,27:7:0:0/1:30 | |
| 2527 chr10 28228865 . A G 99 . DP=31;AF1=0.5;CI95=0.5,0.5;DP4=12,6,4,5;MQ=48;PV4=0.41,0.027,6.4e-10,1 PL:DP:SP:GT:GQ 183,0,255:27:4:0/1:99 | |
| 2528 chr10 28233933 . A G 55 . DP=23;AF1=0.5;CI95=0.5,0.5;DP4=1,13,0,7;MQ=48;PV4=1,0.00032,2e-07,0.37 PL:DP:SP:GT:GQ 85,0,247:21:0:0/1:88 | |
| 2529 chr10 28266692 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2530 chr10 28274821 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2531 chr10 28292466 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2532 chr10 28305680 . G GTATAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2533 chr10 28326048 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2534 chr10 28335552 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2535 chr10 28337648 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2536 chr10 28343281 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2537 chr10 28362676 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2538 chr10 28365090 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 2539 chr10 28367268 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2540 chr10 28378758 . T C 4.75 . DP=6;AF1=0.667;CI95=0.5,1;DP4=0,1,0,4;MQ=50;PV4=1,0.12,1,1 PL:DP:SP:GT:GQ 32,0,3:5:0:0/1:5 | |
| 2541 chr10 28405005 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2542 chr10 28405067 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 2543 chr10 28416260 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2544 chr10 28462579 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2545 chr10 28466912 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2546 chr10 28491161 . T A 3.01 . DP=38;AF1=0.4997;CI95=0.5,0.5;DP4=8,13,0,6;MQ=49;PV4=0.14,0.014,0.065,1 PL:DP:SP:GT:GQ 30,0,255:27:9:0/1:33 | |
| 2547 chr10 28497189 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 2548 chr10 28498142 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 2549 chr10 28527425 . CA CAA 62.5 . INDEL;DP=8;AF1=0.5;CI95=0.5,0.5;DP4=2,0,4,0;MQ=50;PV4=1,1,1,0.28 PL:DP:SP:GT:GQ 100,0,40:6:0:0/1:43 | |
| 2550 chr10 28529341 . C A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 2551 chr10 28537286 . CC CCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2552 chr10 28537469 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2553 chr10 28544824 . T A 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2554 chr10 28564747 . G T 13.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 2555 chr10 28578295 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 2556 chr10 28580517 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2557 chr10 28609246 . A C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 2558 chr10 28617276 . T C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 2559 chr10 28621530 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2560 chr10 28629463 . A T 4.13 . DP=4;AF1=0.4998;CI95=0.5,0.5;DP4=2,0,2,0;MQ=49;PV4=1,0.16,0.21,1 PL:DP:SP:GT:GQ 32,0,62:4:0:0/1:35 | |
| 2561 chr10 28629602 . T C 4.77 . DP=3;AF1=0.4999;CI95=0.5,0.5;DP4=0,2,0,1;MQ=48;PV4=1,0.3,0,1 PL:DP:SP:GT:GQ 33,0,78:3:0:0/1:36 | |
| 2562 chr10 28644241 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2563 chr10 28655308 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2564 chr10 28673430 . G C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 2565 chr10 28676585 . cagga c 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 2566 chr10 28693007 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 2567 chr10 28726238 . Atttttt Attt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2568 chr10 28748899 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2569 chr10 28756742 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2570 chr10 28765359 . T TA 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 2571 chr10 28768470 . C T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 2572 chr10 28780294 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2573 chr10 28805328 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2574 chr10 28833687 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2575 chr10 28860315 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2576 chr10 28874740 . C T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 2577 chr10 28903400 . G GTCTTCTTTAAAACA 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 2578 chr10 28905079 . A G 32 . DP=34;AF1=0.5;CI95=0.5,0.5;DP4=19,0,11,0;MQ=50;PV4=1,1.2e-12,0.069,0.49 PL:DP:SP:GT:GQ 62,0,242:30:0:0/1:65 | |
| 2579 chr10 28906410 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2580 chr10 28932143 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2581 chr10 28962559 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2582 chr10 28986977 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2583 chr10 28991327 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2584 chr10 29003291 . T G 4.77 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2585 chr10 29032651 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2586 chr10 29035381 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2587 chr10 29080153 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 2588 chr10 29085333 . TT TTGAAGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2589 chr10 29090925 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2590 chr10 29123345 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 2591 chr10 29144701 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2592 chr10 29153925 . actct act 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 2593 chr10 29156860 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2594 chr10 29175274 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2595 chr10 29197871 . GATA GA 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 2596 chr10 29203161 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2597 chr10 29206500 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2598 chr10 29245011 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2599 chr10 29261902 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2600 chr10 29312496 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2601 chr10 29316172 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2602 chr10 29321666 . T TTTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2603 chr10 29323576 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2604 chr10 29329721 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2605 chr10 29335099 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2606 chr10 29345593 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 2607 chr10 29346438 . T A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 2608 chr10 29355250 . T TGTGCTGGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2609 chr10 29403442 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2610 chr10 29432318 . G GAGTTACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2611 chr10 29446405 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2612 chr10 29447694 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2613 chr10 29468160 . T C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 2614 chr10 29470831 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2615 chr10 29501937 . ac aCc 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 2616 chr10 29521382 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2617 chr10 29536750 . aa aATATAGa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2618 chr10 29546104 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2619 chr10 29564242 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2620 chr10 29588933 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2621 chr10 29623956 . c cAGAAGTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2622 chr10 29674037 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2623 chr10 29676351 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2624 chr10 29694270 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2625 chr10 29695150 . G T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 2626 chr10 29699940 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2627 chr10 29705445 . gg gGGCg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2628 chr10 29708072 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2629 chr10 29708096 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2630 chr10 29709128 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 2631 chr10 29736086 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2632 chr10 29745400 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2633 chr10 29756868 . T G 7.8 . DP=23;AF1=0.5;CI95=0.5,0.5;DP4=0,10,0,4;MQ=49;PV4=1,0.00095,0.00019,0.16 PL:DP:SP:GT:GQ 37,0,197:14:0:0/1:40 | |
| 2634 chr10 29760209 . C T 7.8 . DP=10;AF1=0.5;CI95=0.5,0.5;DP4=0,6,0,3;MQ=49;PV4=1,0.022,0.0025,1 PL:DP:SP:GT:GQ 37,0,161:9:0:0/1:40 | |
| 2635 chr10 29761295 . T C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 2636 chr10 29775191 . A AAAG 5.08 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,2,1,0;MQ=49;PV4=0.33,1,1,0.26 PL:DP:SP:GT:GQ 41,0,63:3:0:0/1:44 | |
| 2637 chr10 29775571 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2638 chr10 29776264 . C G 3.01 . DP=3;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 2639 chr10 29776280 . C T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 2640 chr10 29784905 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2641 chr10 29788056 . A G 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,41:2:0:0/1:39 | |
| 2642 chr10 29801659 . G A 54 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=2,4,4,3;MQ=49;PV4=0.59,2.1e-05,1,1 PL:DP:SP:GT:GQ 84,0,195:13:2:0/1:87 | |
| 2643 chr10 29805804 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2644 chr10 29809235 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=46 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2645 chr10 29812602 . G T 19.3 . DP=29;AF1=0.5263;CI95=0.5,1;DP4=1,0,1,3;MQ=49;PV4=0.4,0.17,0.34,1 PL:DP:SP:GT:GQ 49,0,10:5:0:0/1:13 | |
| 2646 chr10 29813348 . T G 74 . DP=29;AF1=0.5;CI95=0.5,0.5;DP4=10,0,12,0;MQ=48;PV4=1,8.1e-08,0.13,1 PL:DP:SP:GT:GQ 104,0,200:22:0:0/1:99 | |
| 2647 chr10 29818827 . C T 11.3 . DP=6;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,3;MQ=49;PV4=1,0.034,0.11,1 PL:DP:SP:GT:GQ 41,0,66:5:0:0/1:44 | |
| 2648 chr10 29822032 . C T 99 . DP=18;AF1=1;CI95=1,1;DP4=0,0,11,5;MQ=48 PL:DP:SP:GT:GQ 195,48,0:16:0:1/1:99 | |
| 2649 chr10 29822159 . T C 28 . DP=23;AF1=0.5;CI95=0.5,0.5;DP4=3,9,0,6;MQ=49;PV4=0.51,6.9e-06,0.00044,0.45 PL:DP:SP:GT:GQ 58,0,255:18:3:0/1:61 | |
| 2650 chr10 29829230 . T G 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2651 chr10 29831315 . CA CAAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2652 chr10 29832291 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2653 chr10 29834095 . G A 44.1 . DP=15;AF1=1;CI95=0.5,1;DP4=0,0,0,6;MQ=49 PL:DP:SP:GT:GQ 77,18,0:6:0:1/1:90 | |
| 2654 chr10 29834114 . C G 23 . DP=7;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,3;MQ=46;PV4=1,0.028,0.061,1 PL:DP:SP:GT:GQ 53,0,97:6:0:0/1:56 | |
| 2655 chr10 29835430 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 2656 chr10 29837837 . G C 8.65 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 2657 chr10 29839787 . A G 99 . DP=44;AF1=1;CI95=1,1;DP4=0,1,19,17;MQ=48;PV4=0.49,1,0.28,1 PL:DP:SP:GT:GQ 255,91,0:37:0:1/1:99 | |
| 2658 chr10 29839864 . A C 99 . DP=31;AF1=1;CI95=1,1;DP4=0,0,17,10;MQ=48 PL:DP:SP:GT:GQ 255,81,0:27:0:1/1:99 | |
| 2659 chr10 29840038 . A G 59.4 . DP=40;AF1=1;CI95=0.5,1;DP4=0,1,1,8;MQ=49;PV4=1,1,0.32,1 PL:DP:SP:GT:GQ 92,13,0:10:0:1/1:65 | |
| 2660 chr10 29850365 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2661 chr10 29855830 . TG TGG 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 2662 chr10 29877920 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2663 chr10 29884797 . C T 6.2 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,43:2:0:0/1:37 | |
| 2664 chr10 29894330 . A T 3.01 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,30:2:0:0/1:30 | |
| 2665 chr10 29909226 . g gTA 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 2666 chr10 29913456 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2667 chr10 29921156 . T C 9.31 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 2668 chr10 29932704 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 2669 chr10 29940814 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2670 chr10 29944666 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2671 chr10 29944857 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 2672 chr10 29958055 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 2673 chr10 29977332 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 2674 chr10 29981305 . a aCAACAGATGTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2675 chr10 29985650 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2676 chr10 30007606 . ca cATCTTCGAGCTa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2677 chr10 30015979 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2678 chr10 30019288 . CG CGCGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2679 chr10 30035154 . C CTGTGAAACCCAGTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2680 chr10 30040185 . C G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 2681 chr10 30041889 . tta tTAACta 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2682 chr10 30068887 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2683 chr10 30069197 . A T 4.77 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2684 chr10 30085062 . g gTCTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2685 chr10 30088233 . t tGAATATC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2686 chr10 30091008 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2687 chr10 30092710 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2688 chr10 30099672 . gtca gTCAtca 42.2 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=50 PL:DP:SP:GT:GQ 81,6,0:2:0:1/1:49 | |
| 2689 chr10 30100283 . a aTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2690 chr10 30124440 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 2691 chr10 30138411 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2692 chr10 30141571 . ACTC AC 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 2693 chr10 30168521 . t tGTGTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2694 chr10 30180301 . G A 4.77 . DP=3;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,2;MQ=49;PV4=1,0.025,0.17,1 PL:DP:SP:GT:GQ 33,0,36:3:0:0/1:34 | |
| 2695 chr10 30192392 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 2696 chr10 30210147 . G A 13.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 2697 chr10 30218239 . GT GTGGAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2698 chr10 30238570 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2699 chr10 30239560 . G A 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2700 chr10 30247057 . A T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 2701 chr10 30248865 . T TGGA 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 2702 chr10 30258711 . C CCCCAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2703 chr10 30285671 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 2704 chr10 30310120 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2705 chr10 30311671 . ta tACa 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2706 chr10 30316208 . T C 33.5 . DP=21;AF1=1;CI95=0.5,1;DP4=0,0,2,2;MQ=49 PL:DP:SP:GT:GQ 66,12,0:4:0:1/1:72 | |
| 2707 chr10 30316872 . T C 44 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=9,3,1,4;MQ=49;PV4=0.1,0.026,2.1e-06,1 PL:DP:SP:GT:GQ 74,0,255:17:10:0/1:77 | |
| 2708 chr10 30317826 . A G 99 . DP=31;AF1=1;CI95=1,1;DP4=0,0,7,20;MQ=45 PL:DP:SP:GT:GQ 255,81,0:27:0:1/1:99 | |
| 2709 chr10 30317838 . A G 6.02 . DP=19;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=41 PL:DP:SP:GT:GQ 36,6,0:2:0:1/1:49 | |
| 2710 chr10 30344748 . TC TCTGGGGTGGTAC 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2711 chr10 30358778 . C T 29.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=46 PL:DP:SP:GT:GQ 61,6,0:2:0:1/1:49 | |
| 2712 chr10 30360686 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2713 chr10 30380633 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2714 chr10 30387120 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 2715 chr10 30389284 . t tCC 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 2716 chr10 30422705 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2717 chr10 30424343 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 2718 chr10 30426342 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2719 chr10 30442581 . ga gATAa 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2720 chr10 30450835 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2721 chr10 30454233 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2722 chr10 30464833 . T TATG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2723 chr10 30471182 . GT GTCTGAGTTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2724 chr10 30472100 . GG GGGATTGGGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2725 chr10 30504076 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2726 chr10 30507700 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2727 chr10 30521007 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2728 chr10 30522429 . a aGCCAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2729 chr10 30530312 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 2730 chr10 30530700 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 2731 chr10 30534112 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2732 chr10 30538859 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2733 chr10 30551564 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2734 chr10 30571364 . A T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 2735 chr10 30573417 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2736 chr10 30577615 . TAA TAATCCCCCAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2737 chr10 30611459 . C A 33 . DP=26;AF1=0.5;CI95=0.5,0.5;DP4=5,5,0,8;MQ=49;PV4=0.036,0.0066,0.015,1 PL:DP:SP:GT:GQ 63,0,233:18:14:0/1:66 | |
| 2738 chr10 30615328 . A T 18.1 . DP=13;AF1=0.502;CI95=0.5,0.5;DP4=2,0,5,0;MQ=48;PV4=1,1,0.15,1 PL:DP:SP:GT:GQ 48,0,21:7:0:0/1:24 | |
| 2739 chr10 30629226 . G A 86 . DP=51;AF1=0.5;CI95=0.5,0.5;DP4=20,12,10,7;MQ=50;PV4=1,9e-20,0.0096,1 PL:DP:SP:GT:GQ 116,0,255:49:0:0/1:99 | |
| 2740 chr10 30629434 . CTATTTTA CTA 41.5 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,2;MQ=49;PV4=1,0.25,1,1 PL:DP:SP:GT:GQ 79,0,37:3:0:0/1:40 | |
| 2741 chr10 30650941 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2742 chr10 30657090 . G A 28.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=46 PL:DP:SP:GT:GQ 60,6,0:2:0:1/1:49 | |
| 2743 chr10 30658147 . A G 23 . DP=8;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,3;MQ=44;PV4=1,0.0012,0.076,0.17 PL:DP:SP:GT:GQ 53,0,132:7:0:0/1:56 | |
| 2744 chr10 30660958 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2745 chr10 30669252 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2746 chr10 30669878 . G C 37 . DP=5;AF1=0.5;CI95=0.5,0.5;DP4=2,0,2,0;MQ=40;PV4=1,0.15,1,1 PL:DP:SP:GT:GQ 67,0,49:4:0:0/1:52 | |
| 2747 chr10 30673844 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2748 chr10 30677768 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2749 chr10 30698751 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2750 chr10 30720462 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2751 chr10 30728101 . T C 99 . DP=52;AF1=0.5;CI95=0.5,0.5;DP4=9,18,10,13;MQ=48;PV4=0.56,3.6e-11,8.8e-06,0.045 PL:DP:SP:GT:GQ 231,0,255:50:2:0/1:99 | |
| 2752 chr10 30728250 . A G 99 . DP=13;AF1=0.5;CI95=0.5,0.5;DP4=0,5,0,6;MQ=46;PV4=1,0.048,0,1 PL:DP:SP:GT:GQ 137,0,143:11:0:0/1:99 | |
| 2753 chr10 30736639 . CT CTCAGAGT 3.25 . INDEL;DP=10;AF1=0.5;CI95=0.5,0.5;DP4=3,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,89:4:0:0/1:41 | |
| 2754 chr10 30739549 . GGA GGACTCGA 7.35 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 2755 chr10 30743242 . A AGCGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2756 chr10 30749895 . G A 62.5 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=46 PL:DP:SP:GT:GQ 95,12,0:4:0:1/1:72 | |
| 2757 chr10 30751415 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2758 chr10 30773173 . tat tATCat 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2759 chr10 30785576 . A C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 2760 chr10 30791350 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2761 chr10 30793299 . C G 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2762 chr10 30806833 . G C 9.31 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=39 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 2763 chr10 30807338 . A G 40 . DP=12;AF1=0.5013;CI95=0.5,0.5;DP4=2,0,3,1;MQ=36;PV4=1,1,0.0058,0.39 PL:DP:SP:GT:GQ 70,0,23:6:0:0/1:26 | |
| 2764 chr10 30816061 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 2765 chr10 30833479 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2766 chr10 30845545 . A T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 2767 chr10 30847967 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2768 chr10 30847972 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2769 chr10 30867544 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2770 chr10 30877649 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2771 chr10 30888179 . G GAGTTTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2772 chr10 30895311 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2773 chr10 30897264 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 2774 chr10 30901722 . GCCC GCC 96.5 . INDEL;DP=12;AF1=1;CI95=1,1;DP4=0,0,11,0;MQ=50 PL:DP:SP:GT:GQ 137,33,0:11:0:1/1:99 | |
| 2775 chr10 30914842 . A G 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 2776 chr10 30914965 . TT TTCT 5.08 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,1,1,0.25 PL:DP:SP:GT:GQ 41,0,62:3:0:0/1:44 | |
| 2777 chr10 30915047 . G A 4.13 . DP=9;AF1=0.4998;CI95=0.5,0.5;DP4=3,4,1,1;MQ=49;PV4=1,0.21,0.0037,1 PL:DP:SP:GT:GQ 32,0,190:9:0:0/1:35 | |
| 2778 chr10 30918707 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2779 chr10 30932622 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2780 chr10 30946646 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 2781 chr10 30948777 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2782 chr10 30960282 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2783 chr10 30962015 . A ACC 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 2784 chr10 30978103 . C G 3.01 . DP=5;AF1=0.4997;CI95=0.5,0.5;DP4=2,0,1,1;MQ=50;PV4=1,0.0016,0.21,0.25 PL:DP:SP:GT:GQ 30,0,80:4:0:0/1:33 | |
| 2785 chr10 30978282 . G T 9.52 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=1,5,1,1;MQ=48;PV4=0.46,0.25,0.14,0.39 PL:DP:SP:GT:GQ 39,0,152:8:3:0/1:42 | |
| 2786 chr10 30986292 . G A 4.77 . DP=4;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2787 chr10 30986348 . G A 6.2 . DP=5;AF1=0.5005;CI95=0.5,0.5;DP4=1,0,1,1;MQ=47;PV4=1,0.083,0.24,1 PL:DP:SP:GT:GQ 35,0,26:3:0:0/1:28 | |
| 2788 chr10 30987244 . A ATGCTG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 2789 chr10 30993448 . G A 58.3 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=47 PL:DP:SP:GT:GQ 91,15,0:5:0:1/1:75 | |
| 2790 chr10 30993769 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2791 chr10 31001374 . C T 5.46 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,43:2:0:0/1:36 | |
| 2792 chr10 31002442 . ataaat a 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2793 chr10 31002485 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2794 chr10 31005822 . C T 76.5 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=43 PL:DP:SP:GT:GQ 109,12,0:4:0:1/1:72 | |
| 2795 chr10 31062351 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2796 chr10 31062596 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2797 chr10 31065458 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2798 chr10 31072054 . A T 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 2799 chr10 31072158 . T A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 2800 chr10 31099120 . G A 13.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 2801 chr10 31118263 . G A 4.77 . DP=2;AF1=0.5007;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,25:2:0:0/1:27 | |
| 2802 chr10 31134384 . G C 4.77 . DP=21;AF1=0.4999;CI95=0.5,0.5;DP4=7,0,0,3;MQ=48;PV4=0.0083,0.017,0.02,0.038 PL:DP:SP:GT:GQ 33,0,135:10:21:0/1:36 | |
| 2803 chr10 31134557 . T C 43.5 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=48 PL:DP:SP:GT:GQ 76,12,0:4:0:1/1:72 | |
| 2804 chr10 31138577 . C T 99 . DP=54;AF1=1;CI95=1,1;DP4=0,1,18,28;MQ=43;PV4=1,1,0.00025,1 PL:DP:SP:GT:GQ 255,109,0:47:0:1/1:99 | |
| 2805 chr10 31147028 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 2806 chr10 31161962 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2807 chr10 31163648 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2808 chr10 31167047 . a aGCTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2809 chr10 31222787 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2810 chr10 31225551 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2811 chr10 31244268 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2812 chr10 31264305 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2813 chr10 31295732 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2814 chr10 31330622 . t tCA 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 2815 chr10 31372776 . T G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 2816 chr10 31380107 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2817 chr10 31416915 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2818 chr10 31425308 . A G 19.1 . DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,1;MQ=47;PV4=1,0.064,0.19,0.046 PL:DP:SP:GT:GQ 49,0,41:3:0:0/1:43 | |
| 2819 chr10 31434089 . gccatac gc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2820 chr10 31437503 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2821 chr10 31451744 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 2822 chr10 31468623 . C A 17.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 49,6,0:2:0:1/1:49 | |
| 2823 chr10 31494891 . T C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 2824 chr10 31501780 . G A 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2825 chr10 31523201 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2826 chr10 31548181 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2827 chr10 31553991 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2828 chr10 31572298 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2829 chr10 31593960 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2830 chr10 31600493 . A G 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2831 chr10 31664423 . ATT ATTGCCTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2832 chr10 31670911 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 2833 chr10 31691186 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2834 chr10 31747816 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2835 chr10 31756381 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2836 chr10 31803516 . G A 10.2 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 41,6,0:2:0:1/1:49 | |
| 2837 chr10 31818165 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2838 chr10 31824120 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2839 chr10 31838588 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 2840 chr10 31845534 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2841 chr10 31845548 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2842 chr10 31847049 . T G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 2843 chr10 31887938 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2844 chr10 31898196 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2845 chr10 31934423 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2846 chr10 31953943 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2847 chr10 31981921 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2848 chr10 31999341 . T A 6.98 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,42:2:0:0/1:38 | |
| 2849 chr10 32000081 . C G 4.13 . DP=2;AF1=0.5005;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,26:2:0:0/1:28 | |
| 2850 chr10 32010527 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2851 chr10 32010646 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 2852 chr10 32010933 . GCACACAC GCACACACAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2853 chr10 32033455 . cttt ct 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 2854 chr10 32047527 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2855 chr10 32056734 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2856 chr10 32057599 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2857 chr10 32067026 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 2858 chr10 32068736 . ATG A 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 2859 chr10 32103171 . G A,C 4 . DP=15;AF1=0.6241;CI95=0.5,1;DP4=1,0,5,0;MQ=49;PV4=1,1,0.25,1 PL:DP:SP:GT:GQ 39,8,23,12,0,23:6:0:0/1:6 | |
| 2860 chr10 32109297 . TA TATGA 7.42 . INDEL;DP=7;AF1=0.5101;CI95=0.5,0.5;DP4=1,0,1,0;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,14:2:0:0/1:17 | |
| 2861 chr10 32109724 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2862 chr10 32125803 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2863 chr10 32128083 . G T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 2864 chr10 32150545 . G C 62 . DP=29;AF1=0.5;CI95=0.5,0.5;DP4=8,10,0,9;MQ=49;PV4=0.026,1e-05,0.0076,1 PL:DP:SP:GT:GQ 92,0,255:27:16:0/1:95 | |
| 2865 chr10 32166690 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2866 chr10 32186724 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2867 chr10 32227567 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2868 chr10 32230123 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2869 chr10 32235498 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2870 chr10 32264111 . a aGAAGAT 4.42 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 2871 chr10 32278283 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2872 chr10 32278557 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2873 chr10 32279872 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 2874 chr10 32281844 . gta gTACTta 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2875 chr10 32283229 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2876 chr10 32283779 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2877 chr10 32310625 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2878 chr10 32314461 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2879 chr10 32324950 . A G 4.77 . DP=4;AF1=0.4999;CI95=0.5,0.5;DP4=0,2,0,2;MQ=49;PV4=1,0.092,0.019,1 PL:DP:SP:GT:GQ 33,0,58:4:0:0/1:36 | |
| 2880 chr10 32329735 . t tTCGCTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2881 chr10 32335673 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2882 chr10 32336543 . C T 16.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=46 PL:DP:SP:GT:GQ 48,6,0:2:0:1/1:49 | |
| 2883 chr10 32351580 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2884 chr10 32377154 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2885 chr10 32384665 . AATGCATTAAGATGCATTAAG AATGCATTAAG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2886 chr10 32391566 . T C 4.13 . DP=12;AF1=0.4998;CI95=0.5,0.5;DP4=2,5,1,2;MQ=25;PV4=1,0.066,1,0.097 PL:DP:SP:GT:GQ 32,0,74:10:0:0/1:35 | |
| 2887 chr10 32391711 . G A 34 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=3,2,2,1;MQ=46;PV4=1,0.0016,0.078,0.49 PL:DP:SP:GT:GQ 64,0,185:8:0:0/1:67 | |
| 2888 chr10 32410777 . G A 15.2 . DP=3;AF1=0.5128;CI95=0.5,0.5;DP4=1,0,1,1;MQ=41;PV4=1,1,0,1 PL:DP:SP:GT:GQ 45,0,13:3:0:0/1:16 | |
| 2889 chr10 32422423 . ttac t 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 2890 chr10 32427467 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2891 chr10 32451171 . A ATTTAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2892 chr10 32459069 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2893 chr10 32470854 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2894 chr10 32488263 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2895 chr10 32493612 . C A 6.98 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2896 chr10 32495490 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2897 chr10 32503393 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2898 chr10 32518113 . T TC 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 2899 chr10 32521578 . T A,G 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 38,11,30,8,0,30:2:0:1/1:41 | |
| 2900 chr10 32523845 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2901 chr10 32533808 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2902 chr10 32541409 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2903 chr10 32545126 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2904 chr10 32560581 . G GGATATAATTACAT 99 . INDEL;DP=52;AF1=1;CI95=1,1;DP4=0,0,32,12;MQ=50 PL:DP:SP:GT:GQ 223,132,0:44:0:1/1:99 | |
| 2905 chr10 32628758 . g gGTCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2906 chr10 32672936 . AT ATAGGAGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2907 chr10 32678259 . G C 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 2908 chr10 32690303 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2909 chr10 32727284 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 2910 chr10 32736336 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2911 chr10 32751355 . T TTCTAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2912 chr10 32777882 . C A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 2913 chr10 32792563 . a aT 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 2914 chr10 32810831 . A G 6.98 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,42:2:0:0/1:38 | |
| 2915 chr10 32825827 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2916 chr10 32830894 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2917 chr10 32860851 . C G 3.54 . DP=6;AF1=0.4999;CI95=0.5,0.5;DP4=0,2,0,1;MQ=47;PV4=1,1,0.14,0.039 PL:DP:SP:GT:GQ 31,0,37:3:0:0/1:33 | |
| 2918 chr10 32923945 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2919 chr10 32939872 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2920 chr10 32974872 . GGA GGAGGCGA 3.25 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=3,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,91:4:0:0/1:41 | |
| 2921 chr10 32974874 . AA AAATAGA 3.25 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=3,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,89:4:0:0/1:41 | |
| 2922 chr10 32997832 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2923 chr10 33017782 . C T 7.8 . DP=8;AF1=0.5004;CI95=0.5,0.5;DP4=2,0,4,0;MQ=50;PV4=1,0.17,0.27,0.22 PL:DP:SP:GT:GQ 37,0,27:6:0:0/1:30 | |
| 2924 chr10 33037314 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2925 chr10 33043567 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2926 chr10 33084270 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2927 chr10 33094658 . c cT 3.81 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 2928 chr10 33097168 . A T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 2929 chr10 33126528 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2930 chr10 33129379 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2931 chr10 33137686 . T A 4.13 . DP=11;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,3;MQ=49;PV4=1,0.0058,0.11,0.12 PL:DP:SP:GT:GQ 32,0,40:4:0:0/1:34 | |
| 2932 chr10 33145634 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2933 chr10 33195155 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2934 chr10 33200767 . C CCACTAATG 21.5 . INDEL;DP=19;AF1=0.5;CI95=0.5,0.5;DP4=2,3,2,0;MQ=50;PV4=0.43,1,1,1 PL:DP:SP:GT:GQ 59,0,138:7:4:0/1:62 | |
| 2935 chr10 33217110 . G A 39.6 . DP=33;AF1=0.5939;CI95=0.5,1;DP4=0,1,4,2;MQ=49;PV4=0.43,0.1,0.32,1 PL:DP:SP:GT:GQ 69,0,5:7:0:0/1:7 | |
| 2936 chr10 33226953 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2937 chr10 33228717 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 2938 chr10 33236561 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2939 chr10 33239003 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2940 chr10 33251197 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2941 chr10 33325390 . ct cTAGTt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2942 chr10 33336810 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 2943 chr10 33337669 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2944 chr10 33350034 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2945 chr10 33355820 . A C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 2946 chr10 33368520 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2947 chr10 33368687 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2948 chr10 33378674 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2949 chr10 33381265 . C A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 2950 chr10 33396904 . G GTA 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 2951 chr10 33404740 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2952 chr10 33408260 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2953 chr10 33418387 . CAA CAAA 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 2954 chr10 33420993 . A AGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2955 chr10 33439504 . C T 7.8 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 2956 chr10 33443064 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2957 chr10 33473680 . T TATAGAGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2958 chr10 33489646 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 2959 chr10 33505387 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2960 chr10 33506792 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 2961 chr10 33532554 . CCATACATA CCATA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2962 chr10 33542835 . T C 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 2963 chr10 33550180 . C CCAGTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2964 chr10 33552103 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2965 chr10 33552522 . G A 23 . DP=7;AF1=0.5;CI95=0.5,0.5;DP4=3,0,3,0;MQ=48;PV4=1,0.075,0.1,0.013 PL:DP:SP:GT:GQ 53,0,80:6:0:0/1:56 | |
| 2966 chr10 33552696 . A G 99 . DP=54;AF1=1;CI95=1,1;DP4=1,0,35,10;MQ=49;PV4=1,0.012,0.36,1 PL:DP:SP:GT:GQ 192,106,0:46:0:1/1:99 | |
| 2967 chr10 33561444 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2968 chr10 33562840 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2969 chr10 33566154 . T C 3.54 . DP=3;AF1=0.5002;CI95=0.5,0.5;DP4=0,1,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,28:2:0:0/1:29 | |
| 2970 chr10 33576891 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 2971 chr10 33638551 . A AATATGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2972 chr10 33646471 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2973 chr10 33683720 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 2974 chr10 33687297 . G A 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,37:2:0:0/1:37 | |
| 2975 chr10 33702863 . T C 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 2976 chr10 33711355 . T TCTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2977 chr10 33758375 . A G 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2978 chr10 33760670 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 2979 chr10 33765500 . G T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 2980 chr10 33773405 . C G 3.04 . DP=2;AF1=0.5048;CI95=0.5,0.5;DP4=0,1,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,17:2:0:0/1:20 | |
| 2981 chr10 33836272 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 2982 chr10 33842790 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2983 chr10 33864681 . t tCG 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 2984 chr10 33882475 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 2985 chr10 33885267 . A G 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,43:2:0:0/1:35 | |
| 2986 chr10 33890545 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2987 chr10 33910428 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2988 chr10 33933010 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2989 chr10 33938603 . T C 52.8 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=44 PL:DP:SP:GT:GQ 84,6,0:2:0:1/1:49 | |
| 2990 chr10 33944782 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2991 chr10 33945222 . T TCTAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 2992 chr10 33971973 . a aGTCTCTTGAC 6.55 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 43,0,44:2:0:0/1:43 | |
| 2993 chr10 33997632 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2994 chr10 34021527 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2995 chr10 34029072 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 2996 chr10 34067179 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 2997 chr10 34072099 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 2998 chr10 34092515 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 2999 chr10 34096319 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 3000 chr10 34099944 . A AGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3001 chr10 34123828 . a aGTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3002 chr10 34126225 . G C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 3003 chr10 34133480 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 3004 chr10 34147199 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 3005 chr10 34173417 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3006 chr10 34181371 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3007 chr10 34213667 . C G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 3008 chr10 34224031 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3009 chr10 34235009 . T TTCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3010 chr10 34240541 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 3011 chr10 34248865 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3012 chr10 34259658 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 3013 chr10 34261087 . t tTAATC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3014 chr10 34263031 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3015 chr10 34273946 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 3016 chr10 34275008 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 3017 chr10 34286330 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3018 chr10 34291375 . G A 10.2 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 41,6,0:2:0:1/1:49 | |
| 3019 chr10 34299418 . AT ATCTGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3020 chr10 34315462 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3021 chr10 34316468 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3022 chr10 34332327 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 3023 chr10 34346952 . t tAATTATG 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 3024 chr10 34347166 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=46 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3025 chr10 34354484 . G A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 3026 chr10 34371907 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3027 chr10 34374468 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 3028 chr10 34397525 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 3029 chr10 34399122 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 3030 chr10 34407792 . C T 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3031 chr10 34415927 . C CTCAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3032 chr10 34416770 . ATT ATTGCTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3033 chr10 34417591 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=46 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3034 chr10 34424793 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3035 chr10 34455569 . GT GTGGTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3036 chr10 34456232 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 3037 chr10 34481349 . T TCTCTCTG 10.8 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 3038 chr10 34501962 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 3039 chr10 34506918 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3040 chr10 34520654 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 3041 chr10 34529927 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 3042 chr10 34531933 . T G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 3043 chr10 34534000 . CTG CTGTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3044 chr10 34535571 . ccta c 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 3045 chr10 34581871 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3046 chr10 34599523 . TTC T 5.8 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 3047 chr10 34606402 . G GGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3048 chr10 34614373 . T TGTTCAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3049 chr10 34619946 . A C 15.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 47,6,0:2:0:1/1:49 | |
| 3050 chr10 34620220 . C T 99 . DP=10;AF1=1;CI95=1,1;DP4=0,0,0,8;MQ=42 PL:DP:SP:GT:GQ 171,24,0:8:0:1/1:96 | |
| 3051 chr10 34666864 . C T 3.98 . DP=12;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=50 PL:DP:SP:GT:GQ 33,6,0:2:0:1/1:49 | |
| 3052 chr10 34673736 . C G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 3053 chr10 34677370 . AG AGTGTCTACG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 3054 chr10 34678892 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3055 chr10 34688287 . G A 99 . DP=40;AF1=1;CI95=1,1;DP4=0,1,20,14;MQ=47;PV4=0.43,1,0.14,1 PL:DP:SP:GT:GQ 255,88,0:35:0:1/1:99 | |
| 3056 chr10 34693838 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3057 chr10 34732950 . T TCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3058 chr10 34733736 . TAG T 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 3059 chr10 34733947 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3060 chr10 34739128 . G A 13.9 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=48 PL:DP:SP:GT:GQ 45,6,0:2:0:1/1:49 | |
| 3061 chr10 34743163 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 3062 chr10 34759115 . AAAAT A 3.25 . INDEL;DP=9;AF1=0.5;CI95=0.5,0.5;DP4=2,1,0,1;MQ=50;PV4=1,0.062,1,0.46 PL:DP:SP:GT:GQ 38,0,128:4:0:0/1:41 | |
| 3063 chr10 34774746 . g gTTGAAA 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 3064 chr10 34780763 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3065 chr10 34815120 . C CCAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3066 chr10 34823300 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 3067 chr10 34874791 . C G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 3068 chr10 34875629 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3069 chr10 34877121 . G T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 3070 chr10 34879351 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 3071 chr10 34891542 . C T 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3072 chr10 34895245 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3073 chr10 34901918 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3074 chr10 34908361 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3075 chr10 34908653 . tg tGCg 7.35 . INDEL;DP=2;AF1=0.5001;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,35:2:0:0/1:37 | |
| 3076 chr10 34911787 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 3077 chr10 34915496 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 3078 chr10 34928566 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 3079 chr10 34943966 . ACGTC ACGTCGTC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 3080 chr10 34955567 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 3081 chr10 34956906 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3082 chr10 34962338 . G T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 3083 chr10 34981286 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3084 chr10 34985194 . CCTC CCTCTC 7.39 . INDEL;DP=9;AF1=0.5063;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,16:2:0:0/1:19 | |
| 3085 chr10 34986662 . A C 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3086 chr10 34989498 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3087 chr10 35004788 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3088 chr10 35004809 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3089 chr10 35048292 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3090 chr10 35056398 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3091 chr10 35068510 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3092 chr10 35070195 . GC GCCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3093 chr10 35077807 . ctc cTCTtc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3094 chr10 35123488 . GA GACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3095 chr10 35126930 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 3096 chr10 35136424 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 3097 chr10 35160619 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3098 chr10 35161467 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 3099 chr10 35168105 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3100 chr10 35178938 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3101 chr10 35178991 . aga aGAAAAAAAAGga 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3102 chr10 35185673 . a aGGTCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3103 chr10 35190375 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3104 chr10 35191390 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3105 chr10 35211415 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3106 chr10 35244385 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 3107 chr10 35282616 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 3108 chr10 35303425 . T TGTTTGAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3109 chr10 35318346 . A G 25.8 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=39 PL:DP:SP:GT:GQ 57,6,0:2:0:1/1:49 | |
| 3110 chr10 35324733 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3111 chr10 35327681 . A T 6.98 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 3112 chr10 35334291 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3113 chr10 35344958 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 3114 chr10 35347394 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3115 chr10 35367419 . g gTGATC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3116 chr10 35397040 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3117 chr10 35397348 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 3118 chr10 35399641 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 3119 chr10 35419343 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3120 chr10 35430285 . A G 22.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=46 PL:DP:SP:GT:GQ 54,6,0:2:0:1/1:49 | |
| 3121 chr10 35437301 . T C 4.13 . DP=14;AF1=0.4998;CI95=0.5,0.5;DP4=6,0,0,3;MQ=49;PV4=0.012,0.021,0.043,1 PL:DP:SP:GT:GQ 32,0,153:9:19:0/1:35 | |
| 3122 chr10 35458041 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3123 chr10 35458057 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3124 chr10 35481668 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3125 chr10 35509508 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3126 chr10 35519711 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3127 chr10 35526601 . aa aATa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3128 chr10 35581122 . C G 6.98 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,44:2:0:0/1:38 | |
| 3129 chr10 35594319 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 3130 chr10 35617976 . G T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 3131 chr10 35641118 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3132 chr10 35646301 . A T 6.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 3133 chr10 35710101 . CCC CCCCATAGTCC 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 3134 chr10 35720459 . G GACACCTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3135 chr10 35732952 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3136 chr10 35749681 . C T 6.2 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,44:2:0:0/1:37 | |
| 3137 chr10 35758124 . cttt ct 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 3138 chr10 35774325 . C CGCTCCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3139 chr10 35776565 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 3140 chr10 35785111 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3141 chr10 35786686 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 3142 chr10 35796129 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3143 chr10 35805284 . A C 61.3 . DP=15;AF1=1;CI95=0.5,1;DP4=0,0,2,3;MQ=47 PL:DP:SP:GT:GQ 94,15,0:5:0:1/1:75 | |
| 3144 chr10 35805310 . T A 19.8 . DP=14;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 51,6,0:2:0:1/1:49 | |
| 3145 chr10 35808858 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3146 chr10 35844291 . A C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 3147 chr10 35854891 . G A 3.07 . DP=10;AF1=0.5126;CI95=0.5,0.5;DP4=1,0,2,0;MQ=49;PV4=1,0.41,1,0.065 PL:DP:SP:GT:GQ 30,0,13:3:0:0/1:16 | |
| 3148 chr10 35855606 . A G 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 3149 chr10 35858270 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 3150 chr10 35864042 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 3151 chr10 35864325 . G T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 3152 chr10 35878617 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3153 chr10 35904640 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 3154 chr10 35936433 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 3155 chr10 35936704 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 3156 chr10 35950349 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3157 chr10 35951378 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3158 chr10 35954875 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 3159 chr10 35962668 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3160 chr10 35970629 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3161 chr10 35997737 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 3162 chr10 36071342 . G GTAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3163 chr10 36072410 . TG TGACG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3164 chr10 36090577 . G C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 3165 chr10 36102509 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3166 chr10 36107770 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3167 chr10 36111183 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 3168 chr10 36121708 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3169 chr10 36122755 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3170 chr10 36196025 . g gTGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3171 chr10 36206829 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3172 chr10 36236766 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3173 chr10 36245550 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3174 chr10 36248812 . T A 3.57 . DP=2;AF1=0.5048;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,17:2:0:0/1:20 | |
| 3175 chr10 36294862 . T G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 3176 chr10 36295991 . G C 10.2 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 41,6,0:2:0:1/1:49 | |
| 3177 chr10 36310391 . T TCACCGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3178 chr10 36313497 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3179 chr10 36372406 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 3180 chr10 36376841 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3181 chr10 36392084 . g gGA 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 3182 chr10 36398608 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3183 chr10 36398610 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3184 chr10 36429955 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3185 chr10 36429960 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3186 chr10 36439733 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3187 chr10 36441076 . c cCAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3188 chr10 36449117 . c cATA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3189 chr10 36449514 . A C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 3190 chr10 36469435 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3191 chr10 36474879 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 3192 chr10 36497905 . T G 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 3193 chr10 36503885 . G C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 3194 chr10 36545175 . GGC GGCGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3195 chr10 36553573 . A AAGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3196 chr10 36562725 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 3197 chr10 36573728 . TTAT TT 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 3198 chr10 36606673 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 3199 chr10 36608463 . A C 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3200 chr10 36677018 . gat gATGTGACat 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3201 chr10 36679608 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 3202 chr10 36682959 . G T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 3203 chr10 36697875 . AACC AACCCACC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3204 chr10 36715949 . AA AAGCCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3205 chr10 36772741 . t tCTTCCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3206 chr10 36800702 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 3207 chr10 36812006 . AC ACTC 4.42 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,2,1,0;MQ=50;PV4=0.33,1,1,0.36 PL:DP:SP:GT:GQ 40,0,78:3:0:0/1:43 | |
| 3208 chr10 36835248 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 3209 chr10 36870074 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3210 chr10 36889187 . GG GGTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3211 chr10 36893812 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3212 chr10 36893819 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3213 chr10 36908485 . G GTGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3214 chr10 36910196 . t tTGATTC 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=49 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 3215 chr10 36932117 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 3216 chr10 36961082 . A T 3.03 . DP=2;AF1=0.5029;CI95=0.5,0.5;DP4=1,0,1,0;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,19:2:0:0/1:22 | |
| 3217 chr10 37008039 . G GAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3218 chr10 37013095 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3219 chr10 37034284 . att aTTCTtt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3220 chr10 37040096 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3221 chr10 37065109 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3222 chr10 37068735 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3223 chr10 37093930 . T G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 3224 chr10 37130363 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3225 chr10 37130584 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3226 chr10 37146677 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3227 chr10 37167400 . A C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 3228 chr10 37169344 . C CAGCCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3229 chr10 37181256 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 3230 chr10 37220084 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3231 chr10 37227735 . T G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 3232 chr10 37236113 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3233 chr10 37267719 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 3234 chr10 37284311 . G GTC 12.7 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3235 chr10 37288964 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 3236 chr10 37296532 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 3237 chr10 37299658 . TT TTGGAAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3238 chr10 37340370 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 3239 chr10 37353223 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3240 chr10 37390307 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3241 chr10 37391637 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 3242 chr10 37414855 . C T 3.54 . DP=12;AF1=0.4998;CI95=0.5,0.5;DP4=2,0,2,0;MQ=49;PV4=1,0.012,0.21,0.1 PL:DP:SP:GT:GQ 31,0,80:4:0:0/1:34 | |
| 3243 chr10 37425518 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3244 chr10 37429639 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3245 chr10 37433597 . AG AGGGTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3246 chr10 37434994 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 3247 chr10 37439353 . A C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 3248 chr10 37443587 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 3249 chr10 37447460 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3250 chr10 37451745 . GG GGCAGATTCAG 7.62 . INDEL;DP=3;AF1=0.543;CI95=0.5,1;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,8:2:0:0/1:11 | |
| 3251 chr10 37493770 . g gGGTGAGTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3252 chr10 37498317 . a aGTCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3253 chr10 37517258 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3254 chr10 37581472 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3255 chr10 37583261 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 3256 chr10 37583482 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 3257 chr10 37591470 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3258 chr10 37610125 . c cA 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 3259 chr10 37619304 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 3260 chr10 37651315 . ttg tTGTGGTTGATGtg 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=46 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 3261 chr10 37677013 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 3262 chr10 37684923 . ga gACTCGAa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3263 chr10 37716435 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 3264 chr10 37716595 . TG TGGCCG 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 3265 chr10 37812713 . AG AGGGG 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,2,1,0;MQ=49;PV4=0.33,1,1,1 PL:DP:SP:GT:GQ 41,0,60:3:0:0/1:44 | |
| 3266 chr10 37812759 . T C 6.79 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 37,6,0:2:0:1/1:49 | |
| 3267 chr10 37817239 . ACTC ACTCGAACCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3268 chr10 37853202 . T C 3.55 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3269 chr10 37865248 . T A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 3270 chr10 37880490 . T G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 3271 chr10 37891916 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3272 chr10 37925579 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 3273 chr10 37930964 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 3274 chr10 37938522 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3275 chr10 37940091 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3276 chr10 37941524 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 3277 chr10 37969641 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 3278 chr10 37977510 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3279 chr10 38014626 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 3280 chr10 38038482 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3281 chr10 38061542 . G GTGCT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 3282 chr10 38070669 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 3283 chr10 38107549 . G C 4.79 . DP=4;AF1=0.503;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,19:2:0:0/1:22 | |
| 3284 chr10 38107653 . T A 77 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=5,3,3,1;MQ=48;PV4=1,0.31,0,1 PL:DP:SP:GT:GQ 107,0,218:12:0:0/1:99 | |
| 3285 chr10 38109640 . A G 3.02 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3286 chr10 38109830 . CT CTAT 3.25 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=3,0,1,0;MQ=50;PV4=1,1,1,0.24 PL:DP:SP:GT:GQ 38,0,91:4:0:0/1:41 | |
| 3287 chr10 38140388 . a aTG 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 3288 chr10 38147237 . t tCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3289 chr10 38157496 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 3290 chr10 38172935 . G A 24.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 56,6,0:2:0:1/1:49 | |
| 3291 chr10 38192145 . AA AACGTTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3292 chr10 38205745 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 3293 chr10 38219008 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3294 chr10 38222534 . ct cTTGTt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3295 chr10 38246545 . A G 52 . DP=21;AF1=0.5005;CI95=0.5,0.5;DP4=0,2,0,10;MQ=48;PV4=1,0.059,1,1 PL:DP:SP:GT:GQ 82,0,27:12:0:0/1:30 | |
| 3296 chr10 38261421 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3297 chr10 38265650 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3298 chr10 38268810 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3299 chr10 38301309 . TTG TTGTATGCTG 5.08 . INDEL;DP=5;AF1=0.5006;CI95=0.5,0.5;DP4=0,2,0,1;MQ=49;PV4=1,1,1,0.11 PL:DP:SP:GT:GQ 41,0,26:3:0:0/1:29 | |
| 3300 chr10 38303263 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3301 chr10 38334264 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 3302 chr10 38343625 . T C 3.54 . DP=5;AF1=0.4998;CI95=0.5,0.5;DP4=2,1,0,1;MQ=48;PV4=1,1,0.048,1 PL:DP:SP:GT:GQ 31,0,101:4:0:0/1:34 | |
| 3303 chr10 38344124 . C G 48 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=2,6,0,7;MQ=42;PV4=0.47,1,8.5e-05,0.45 PL:DP:SP:GT:GQ 78,0,130:15:3:0/1:81 | |
| 3304 chr10 38345425 . CC CCCCCGC 3.25 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,3,1,0;MQ=49;PV4=0.25,1,1,0.075 PL:DP:SP:GT:GQ 38,0,88:4:0:0/1:41 | |
| 3305 chr10 38355752 . C A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 3306 chr10 38437730 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 3307 chr10 38490602 . ac aCAGAGTGACc 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 3308 chr10 38502641 . t tTAGGCC 7.52 . INDEL;DP=2;AF1=0.5263;CI95=0.5,1;DP4=0,1,0,1;MQ=37;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,10:2:0:0/1:13 | |
| 3309 chr10 38502704 . a aCCAGTGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3310 chr10 38530309 . agt aGTTgt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3311 chr10 38537574 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3312 chr10 38549780 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 3313 chr10 38582600 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 3314 chr10 38599101 . CTT CTTT 44.5 . INDEL;DP=9;AF1=0.505;CI95=0.5,0.5;DP4=1,0,2,1;MQ=50;PV4=1,1,1,0.21 PL:DP:SP:GT:GQ 82,0,17:4:0:0/1:20 | |
| 3315 chr10 38599164 . T C 3.54 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,34:2:0:0/1:32 | |
| 3316 chr10 38601548 . t tTGG 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 3317 chr10 38610786 . C CTCGCCCGGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3318 chr10 38654556 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3319 chr10 38719868 . AT ATGGAGGACT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3320 chr10 38773881 . a aTC 9.05 . INDEL;DP=4;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 3321 chr10 38774709 . G T 11.3 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 3322 chr10 38776508 . G C 4.16 . DP=16;AF1=0.5062;CI95=0.5,0.5;DP4=0,3,3,2;MQ=14;PV4=0.2,0.023,0.35,1 PL:DP:SP:GT:GQ 32,0,16:8:7:0/1:19 | |
| 3323 chr10 38776762 . T C 3.11 . DP=2;AF1=0.7301;CI95=0.5,1;DP4=0,1,0,1;MQ=31;PV4=1,1,1,1 PL:DP:SP:GT:GQ 29,0,2:2:0:0/1:3 | |
| 3324 chr10 38778318 . C G,A 4.77 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,2,0;MQ=44 PL:DP:SP:GT:GQ 47,17,33,14,0,33:2:0:1/1:41 | |
| 3325 chr10 38779550 . T C 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 3326 chr10 38781744 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3327 chr10 38781970 . A T 19.1 . DP=3;AF1=0.5;CI95=0.5,0.5;DP4=1,0,2,0;MQ=46;PV4=1,0.15,0.46,0.29 PL:DP:SP:GT:GQ 49,0,37:3:0:0/1:40 | |
| 3328 chr10 38785944 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3329 chr10 38787411 . gc gCCc 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 3330 chr10 38791187 . C A 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3331 chr10 38792028 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3332 chr10 38794362 . c cTTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3333 chr10 38794492 . gaaa gAAACATTTACaaa 7.35 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 3334 chr10 38798782 . G A 7.8 . DP=4;AF1=0.9999;CI95=0.5,1;DP4=1,0,2,0;MQ=36;PV4=1,0.41,1,1 PL:DP:SP:GT:GQ 37,3,0:3:0:1/1:41 | |
| 3335 chr10 38799225 . g gCTATT 9.94 . INDEL;DP=5;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 3336 chr10 38800671 . T G 63.5 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,3,1;MQ=46 PL:DP:SP:GT:GQ 96,12,0:4:0:1/1:72 | |
| 3337 chr10 38800681 . G A 3.01 . DP=7;AF1=0.4997;CI95=0.5,0.5;DP4=1,1,1,1;MQ=47;PV4=1,0.085,0.45,1 PL:DP:SP:GT:GQ 30,0,69:4:0:0/1:33 | |
| 3338 chr10 38801251 . C A 4.77 . DP=4;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,1;MQ=45;PV4=1,0.013,0.037,0.33 PL:DP:SP:GT:GQ 33,0,41:3:0:0/1:35 | |
| 3339 chr10 38803692 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3340 chr10 38804632 . T A 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3341 chr10 38804745 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3342 chr10 38805420 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 3343 chr10 38806642 . G C 5.29 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=18 PL:DP:SP:GT:GQ 35,6,0:2:0:1/1:49 | |
| 3344 chr10 38813134 . T C 4.13 . DP=4;AF1=0.4998;CI95=0.5,0.5;DP4=1,1,0,1;MQ=38;PV4=1,0.25,1,1 PL:DP:SP:GT:GQ 32,0,48:3:0:0/1:35 | |
| 3345 chr10 38815246 . C T 12.3 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 3346 chr10 38815863 . G C 12.3 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 3347 chr10 38873801 . G C 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3348 chr10 38874133 . t tACGCG 5.93 . INDEL;DP=5;AF1=0.7303;CI95=0.5,1;DP4=1,1,1,0;MQ=29;PV4=1,1,1,0.23 PL:DP:SP:GT:GQ 41,0,2:3:0:0/1:3 | |
| 3349 chr10 38876013 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3350 chr10 38880506 . T C 3.04 . DP=5;AF1=0.5048;CI95=0.5,0.5;DP4=0,1,2,0;MQ=42;PV4=0.33,1,0.31,0.33 PL:DP:SP:GT:GQ 30,0,17:3:0:0/1:20 | |
| 3351 chr10 38881036 . T G 5.55 . DP=4;AF1=0.9966;CI95=0.5,1;DP4=1,0,0,1;MQ=31;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,1,0:2:0:1/1:23 | |
| 3352 chr10 38881831 . C T 4.2 . DP=3;AF1=0.9966;CI95=0.5,1;DP4=0,1,0,1;MQ=30;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,1,0:2:0:1/1:23 | |
| 3353 chr10 38882014 . G T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 3354 chr10 38889687 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 3355 chr10 38934239 . A T 3.54 . DP=4;AF1=0.4998;CI95=0.5,0.5;DP4=2,0,0,2;MQ=49;PV4=0.33,0.19,0.28,1 PL:DP:SP:GT:GQ 31,0,60:4:5:0/1:34 | |
| 3356 chr10 38935143 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 3357 chr10 38944212 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3358 chr10 38944367 . A G 46 . DP=5;AF1=0.5;CI95=0.5,0.5;DP4=1,1,3,0;MQ=41;PV4=0.4,0.039,1,1 PL:DP:SP:GT:GQ 76,0,45:5:0:0/1:48 | |
| 3359 chr10 38976302 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3360 chr10 38982174 . G A 6.98 . DP=4;AF1=0.4999;CI95=0.5,0.5;DP4=0,2,1,1;MQ=47;PV4=1,0.23,0.071,1 PL:DP:SP:GT:GQ 36,0,57:4:0:0/1:39 | |
| 3361 chr10 38982189 . C G 9.52 . DP=6;AF1=0.5;CI95=0.5,0.5;DP4=0,2,1,1;MQ=47;PV4=1,0.15,0.061,1 PL:DP:SP:GT:GQ 39,0,63:4:0:0/1:42 | |
| 3362 chr10 39023762 . GC GCTCTCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3363 chr10 39030109 . CCT CCTTCT 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 3364 chr10 39034259 . CT CTCAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3365 chr10 39048746 . GAA GAATCCATCAAAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3366 chr10 39075806 . t tTGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3367 chr10 39076852 . T A 6.98 . DP=6;AF1=0.4999;CI95=0.5,0.5;DP4=2,2,2,0;MQ=44;PV4=0.47,0.19,1,1 PL:DP:SP:GT:GQ 36,0,87:6:3:0/1:39 | |
| 3368 chr10 39078989 . A G 11.3 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 3369 chr10 39080081 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3370 chr10 39080467 . A G 51 . DP=8;AF1=0.5006;CI95=0.5,0.5;DP4=2,0,2,2;MQ=41;PV4=0.47,0.058,1,1 PL:DP:SP:GT:GQ 81,0,26:6:3:0/1:29 | |
| 3371 chr10 39081577 . A G 5.08 . DP=2;AF1=0.8276;CI95=0.5,1;DP4=0,1,0,1;MQ=27;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,1:2:0:1/1:5 | |
| 3372 chr10 39083149 . c cAAGGG 5.8 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 3373 chr10 39084270 . G A 3.02 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3374 chr10 39084808 . C G 45.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=42 PL:DP:SP:GT:GQ 77,6,0:2:0:1/1:49 | |
| 3375 chr10 39086101 . C G 7.8 . DP=3;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,40:2:0:0/1:38 | |
| 3376 chr10 39087140 . cc cCGGAc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3377 chr10 39087998 . g gGA 6.56 . INDEL;DP=6;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 3378 chr10 39089624 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 3379 chr10 39090553 . G T 11.3 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 3380 chr10 39092262 . C T 3.02 . DP=4;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3381 chr10 39094311 . A G 8.75 . DP=4;AF1=0.9966;CI95=0.5,1;DP4=0,1,0,1;MQ=30;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,1,0:2:0:1/1:23 | |
| 3382 chr10 39094429 . C A 4.77 . DP=4;AF1=0.5004;CI95=0.5,0.5;DP4=1,1,1,1;MQ=40;PV4=1,0.059,1,1 PL:DP:SP:GT:GQ 33,0,27:4:0:0/1:29 | |
| 3383 chr10 39097098 . A G 3.25 . DP=4;AF1=0.8276;CI95=0.5,1;DP4=3,0,0,1;MQ=21;PV4=0.25,0.46,1,1 PL:DP:SP:GT:GQ 29,0,1:4:0:1/1:5 | |
| 3384 chr10 39097584 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 3385 chr10 39098634 . G A 25.1 . DP=5;AF1=0.508;CI95=0.5,0.5;DP4=1,0,3,1;MQ=44;PV4=1,0,0.32,0.22 PL:DP:SP:GT:GQ 55,0,15:5:0:0/1:18 | |
| 3386 chr10 39104807 . G T 23 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=45 PL:DP:SP:GT:GQ 55,9,0:3:0:1/1:63 | |
| 3387 chr10 39104808 . cc cCGAAAc 12.7 . INDEL;DP=5;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3388 chr10 39104980 . A G 9.04 . DP=2;AF1=0.8277;CI95=0.5,1;DP4=1,0,1,0;MQ=31;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,1:2:0:1/1:5 | |
| 3389 chr10 39105257 . T A 5.29 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=20 PL:DP:SP:GT:GQ 35,6,0:2:0:1/1:49 | |
| 3390 chr10 39105264 . A G 28.3 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=18 PL:DP:SP:GT:GQ 61,15,0:5:0:1/1:75 | |
| 3391 chr10 39105440 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3392 chr10 39109209 . G C 21 . DP=5;AF1=0.5005;CI95=0.5,0.5;DP4=0,1,1,1;MQ=39;PV4=1,0,1,1 PL:DP:SP:GT:GQ 51,0,27:3:0:0/1:30 | |
| 3393 chr10 39109771 . A G 5.76 . DP=4;AF1=0.5553;CI95=0.5,1;DP4=1,1,1,0;MQ=26;PV4=1,1,1,0.27 PL:DP:SP:GT:GQ 34,0,7:3:0:0/1:10 | |
| 3394 chr10 39112316 . T A 27.5 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,3,1;MQ=17 PL:DP:SP:GT:GQ 60,12,0:4:0:1/1:72 | |
| 3395 chr10 39113794 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3396 chr10 39115063 . T C 6.98 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,42:2:0:0/1:38 | |
| 3397 chr10 39115603 . T G 10.4 . DP=6;AF1=0.9999;CI95=0.5,1;DP4=1,0,1,1;MQ=28;PV4=1,0.17,1,1 PL:DP:SP:GT:GQ 40,3,0:3:0:1/1:41 | |
| 3398 chr10 39116258 . A G 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3399 chr10 39116432 . T A 4.61 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=50 PL:DP:SP:GT:GQ 34,6,0:2:0:1/1:49 | |
| 3400 chr10 39116589 . C T 37.5 . DP=10;AF1=1;CI95=0.5,1;DP4=0,1,5,0;MQ=43;PV4=0.17,1,0.27,1 PL:DP:SP:GT:GQ 68,4,0:6:0:1/1:45 | |
| 3401 chr10 39117130 . C T 5.29 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=49 PL:DP:SP:GT:GQ 35,6,0:2:0:1/1:49 | |
| 3402 chr10 39117350 . G C 15.1 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=50 PL:DP:SP:GT:GQ 47,9,0:3:0:1/1:63 | |
| 3403 chr10 39118551 . g gGGGAATACAT 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=46 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 3404 chr10 39120509 . G T 15.6 . DP=18;AF1=1;CI95=0.5,1;DP4=0,1,2,2;MQ=17;PV4=1,0.034,1,1 PL:DP:SP:GT:GQ 47,7,0:5:0:1/1:57 | |
| 3405 chr10 39120545 . T C,A 11.9 . DP=16;AF1=1;CI95=0.5,1;DP4=1,0,2,5;MQ=13;PV4=0.37,1,1,1 PL:DP:SP:GT:GQ 44,11,40,0,5,41:8:0:1/1:66 | |
| 3406 chr10 39121303 . g gTT 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 3407 chr10 39122877 . atc a 3.25 . INDEL;DP=4;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 3408 chr10 39124222 . T C 6.98 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,44:2:0:0/1:38 | |
| 3409 chr10 39125142 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 3410 chr10 39126167 . tta tTAta 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 3411 chr10 39128879 . A C 27.1 . DP=9;AF1=1;CI95=0.5,1;DP4=0,0,1,5;MQ=28 PL:DP:SP:GT:GQ 60,18,0:6:0:1/1:90 | |
| 3412 chr10 39128883 . T C 94.1 . DP=12;AF1=0.5102;CI95=0.5,0.5;DP4=1,3,2,4;MQ=33;PV4=1,0.00015,1,0.019 PL:DP:SP:GT:GQ 124,0,14:10:0:0/1:17 | |
| 3413 chr10 39130650 . agg aGGGgg 12.7 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3414 chr10 39132605 . T C 13.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=44 PL:DP:SP:GT:GQ 45,6,0:2:0:1/1:49 | |
| 3415 chr10 39132696 . A C 4.77 . DP=4;AF1=0.5004;CI95=0.5,0.5;DP4=1,0,1,1;MQ=46;PV4=1,0,1,0 PL:DP:SP:GT:GQ 33,0,27:3:0:0/1:29 | |
| 3416 chr10 39132715 . T A 21 . DP=8;AF1=0.5;CI95=0.5,0.5;DP4=3,0,3,0;MQ=45;PV4=1,0.13,0.4,0.16 PL:DP:SP:GT:GQ 51,0,73:6:0:0/1:54 | |
| 3417 chr10 39132728 . T A 6.2 . DP=8;AF1=0.4999;CI95=0.5,0.5;DP4=3,2,3,0;MQ=46;PV4=0.46,0.0031,0.43,0.31 PL:DP:SP:GT:GQ 35,0,177:8:3:0/1:38 | |
| 3418 chr10 39134500 . T C 6.99 . DP=3;AF1=0.5009;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,24:2:0:0/1:27 | |
| 3419 chr10 39135265 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3420 chr10 39135639 . a aCCCCAAACAG 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=48 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 3421 chr10 39135799 . atc aTCAACtc 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3422 chr10 39139378 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 3423 chr10 39140602 . G A 4.85 . DP=2;AF1=0.9966;CI95=0.5,1;DP4=0,1,0,1;MQ=30;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,1,0:2:0:1/1:23 | |
| 3424 chr10 39140744 . g gCAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3425 chr10 39143084 . T C 8.02 . DP=2;AF1=0.5335;CI95=0.5,1;DP4=0,1,1,0;MQ=32;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,9:2:0:0/1:12 | |
| 3426 chr10 39148632 . C T 4.77 . DP=3;AF1=0.4999;CI95=0.5,0.5;DP4=2,0,1,0;MQ=47;PV4=1,1,0,1 PL:DP:SP:GT:GQ 33,0,56:3:0:0/1:36 | |
| 3427 chr10 39148717 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 3428 chr10 39149096 . C T 99 . DP=15;AF1=1;CI95=1,1;DP4=0,0,7,8;MQ=17 PL:DP:SP:GT:GQ 132,45,0:15:0:1/1:99 | |
| 3429 chr10 39150836 . C T 22.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=31 PL:DP:SP:GT:GQ 54,6,0:2:0:1/1:49 | |
| 3430 chr10 39151911 . G A 14.2 . DP=5;AF1=0.5025;CI95=0.5,0.5;DP4=1,1,1,1;MQ=32;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,20:4:0:0/1:23 | |
| 3431 chr10 39152374 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3432 chr10 39152768 . T A 14.9 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 46,6,0:2:0:1/1:49 | |
| 3433 chr10 39153094 . C A 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3434 chr10 39153473 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3435 chr10 39154136 . G T 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3436 chr10 42356255 . ttcc tCACAAtcc 8 . INDEL;DP=7;AF1=0.6243;CI95=0.5,1;DP4=0,1,0,1;MQ=36;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,4:2:0:0/1:6 | |
| 3437 chr10 42356338 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3438 chr10 42356950 . G A 5.76 . DP=10;AF1=0.5553;CI95=0.5,1;DP4=0,1,3,0;MQ=23;PV4=0.25,0.23,1,1 PL:DP:SP:GT:GQ 34,0,7:4:0:0/1:10 | |
| 3439 chr10 42358312 . T G 3.04 . DP=3;AF1=0.5048;CI95=0.5,0.5;DP4=2,0,0,1;MQ=38;PV4=0.33,0.47,1,1 PL:DP:SP:GT:GQ 30,0,17:3:0:0/1:20 | |
| 3440 chr10 42360543 . A G 3.07 . DP=4;AF1=0.5126;CI95=0.5,0.5;DP4=3,0,0,1;MQ=23;PV4=0.25,1,1,1 PL:DP:SP:GT:GQ 30,0,13:4:0:0/1:16 | |
| 3441 chr10 42363276 . G A 4.2 . DP=2;AF1=0.9966;CI95=0.5,1;DP4=0,1,1,0;MQ=31;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,1,0:2:0:1/1:23 | |
| 3442 chr10 42363635 . ca cAGAGTTCGGGa 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3443 chr10 42364456 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 3444 chr10 42369002 . A G 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3445 chr10 42373897 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 3446 chr10 42375764 . G A 3.65 . DP=2;AF1=0.7301;CI95=0.5,1;DP4=1,0,1,0;MQ=26;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,2:2:0:0/1:3 | |
| 3447 chr10 42375904 . A G 3.23 . DP=8;AF1=0.5552;CI95=0.5,1;DP4=2,1,1,1;MQ=22;PV4=1,0.25,1,1 PL:DP:SP:GT:GQ 30,0,7:5:0:0/1:10 | |
| 3448 chr10 42376569 . G A 56 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,1;MQ=40 PL:DP:SP:GT:GQ 88,9,0:3:0:1/1:63 | |
| 3449 chr10 42378525 . C T 5.65 . DP=3;AF1=0.5335;CI95=0.5,1;DP4=0,1,1,1;MQ=39;PV4=1,1,0.27,0.19 PL:DP:SP:GT:GQ 34,0,9:3:0:0/1:12 | |
| 3450 chr10 42379480 . A G 36.1 . DP=7;AF1=0.9966;CI95=0.5,1;DP4=1,0,3,0;MQ=41;PV4=1,0.18,1,1 PL:DP:SP:GT:GQ 65,1,0:4:0:1/1:23 | |
| 3451 chr10 42384737 . C T 53 . DP=43;AF1=0.5;CI95=0.5,0.5;DP4=8,8,10,10;MQ=16;PV4=1,0.25,1,1 PL:DP:SP:GT:GQ 83,0,51:36:0:0/1:54 | |
| 3452 chr10 42385191 . A G 44.1 . DP=72;AF1=1;CI95=0.5,1;DP4=0,0,4,2;MQ=28 PL:DP:SP:GT:GQ 77,18,0:6:0:1/1:90 | |
| 3453 chr10 42385236 . A T 25 . DP=42;AF1=0.5002;CI95=0.5,0.5;DP4=3,2,6,2;MQ=16;PV4=1,3.4e-05,0.4,1 PL:DP:SP:GT:GQ 55,0,32:13:0:0/1:35 | |
| 3454 chr10 42385397 . T A 4.13 . DP=4;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,2,0;MQ=36;PV4=0.33,0.12,0.33,1 PL:DP:SP:GT:GQ 32,0,35:3:0:0/1:33 | |
| 3455 chr10 42386879 . C G 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3456 chr10 42387664 . A C 3.56 . DP=11;AF1=0.5038;CI95=0.5,0.5;DP4=0,1,0,3;MQ=48;PV4=1,0.015,0.3,1 PL:DP:SP:GT:GQ 31,0,18:4:0:0/1:21 | |
| 3457 chr10 42387696 . C T 4.77 . DP=27;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,2;MQ=48;PV4=0.33,0.1,0.33,0.42 PL:DP:SP:GT:GQ 33,0,41:3:0:0/1:35 | |
| 3458 chr10 42387773 . acg ag 3.81 . INDEL;DP=18;AF1=0.5012;CI95=0.5,0.5;DP4=1,1,3,1;MQ=25;PV4=1,0.051,0.16,1 PL:DP:SP:GT:GQ 39,0,23:6:0:0/1:26 | |
| 3459 chr10 42388484 . A G 34 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,1,2;MQ=27 PL:DP:SP:GT:GQ 66,9,0:3:0:1/1:63 | |
| 3460 chr10 42390150 . A T 3.54 . DP=14;AF1=0.4998;CI95=0.5,0.5;DP4=1,7,1,2;MQ=26;PV4=0.49,1e-05,1,0.28 PL:DP:SP:GT:GQ 31,0,38:11:3:0/1:33 | |
| 3461 chr10 42390156 . T C 28 . DP=13;AF1=0.5006;CI95=0.5,0.5;DP4=0,7,1,3;MQ=29;PV4=0.36,0.0001,1,0.084 PL:DP:SP:GT:GQ 58,0,26:11:0:0/1:29 | |
| 3462 chr10 42390671 . A G 5.47 . DP=5;AF1=0.5019;CI95=0.5,0.5;DP4=1,1,0,1;MQ=38;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,21:3:0:0/1:24 | |
| 3463 chr10 42390732 . T G 6.17 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,1,2;MQ=14 PL:DP:SP:GT:GQ 37,9,0:3:0:1/1:63 | |
| 3464 chr10 42392938 . C T 6.2 . DP=3;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,2,0;MQ=45;PV4=0.33,0.16,0,0.23 PL:DP:SP:GT:GQ 35,0,42:3:0:0/1:37 | |
| 3465 chr10 42394484 . T C 44 . DP=33;AF1=0.5;CI95=0.5,0.5;DP4=8,7,7,7;MQ=17;PV4=1,4.2e-07,1,1 PL:DP:SP:GT:GQ 74,0,74:29:0:0/1:74 | |
| 3466 chr10 42396883 . A C 63.5 . DP=79;AF1=1;CI95=0.5,1;DP4=0,1,6,4;MQ=33;PV4=0.45,0.073,0.095,1 PL:DP:SP:GT:GQ 95,7,0:11:0:1/1:57 | |
| 3467 chr10 42397102 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 3468 chr10 42397858 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 3469 chr10 42398142 . C A 4.91 . DP=9;AF1=0.5262;CI95=0.5,1;DP4=3,0,1,2;MQ=15;PV4=0.4,0.0099,1,1 PL:DP:SP:GT:GQ 33,0,10:6:4:0/1:13 | |
| 3470 chr10 42398310 . G A 8.44 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 39,6,0:2:0:1/1:49 | |
| 3471 chr10 42398354 . C T 7.77 . DP=5;AF1=0.6671;CI95=0.5,1;DP4=0,1,0,2;MQ=37;PV4=1,0.12,1,1 PL:DP:SP:GT:GQ 36,0,3:3:0:0/1:5 | |
| 3472 chr10 42399131 . a aACTTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3473 chr10 42399200 . C G 6.98 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 3474 chr10 42399418 . C G 16.6 . DP=4;AF1=0.8277;CI95=0.5,1;DP4=0,2,0,2;MQ=23;PV4=1,0.033,1,1 PL:DP:SP:GT:GQ 45,0,1:4:0:1/1:5 | |
| 3475 chr10 42400124 . T C 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3476 chr10 42400315 . C T 3.98 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=25 PL:DP:SP:GT:GQ 33,6,0:2:0:1/1:49 | |
| 3477 chr10 42400424 . A C 13.2 . DP=28;AF1=0.5;CI95=0.5,0.5;DP4=9,7,8,2;MQ=41;PV4=0.4,0.042,3.2e-08,0.00014 PL:DP:SP:GT:GQ 43,0,222:26:4:0/1:46 | |
| 3478 chr10 42400777 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3479 chr10 42401925 . T C 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,39:2:0:0/1:38 | |
| 3480 chr10 42403051 . C T 18.8 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=46 PL:DP:SP:GT:GQ 50,6,0:2:0:1/1:49 | |
| 3481 chr10 42403148 . T G 37.1 . DP=7;AF1=1;CI95=1,1;DP4=0,0,5,2;MQ=15 PL:DP:SP:GT:GQ 70,21,0:7:0:1/1:84 | |
| 3482 chr10 42406699 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3483 chr10 42407411 . G C 13.2 . DP=5;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,1;MQ=46;PV4=1,0.087,0.31,0.44 PL:DP:SP:GT:GQ 43,0,41:3:0:0/1:42 | |
| 3484 chr10 42409108 . A G 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3485 chr10 42417033 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3486 chr10 42417060 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3487 chr10 42427053 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 3488 chr10 42427989 . A C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 3489 chr10 42437459 . G C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 3490 chr10 42492209 . T A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 3491 chr10 42525960 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 3492 chr10 42527538 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 3493 chr10 42528772 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 3494 chr10 42529019 . G C 13.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 3495 chr10 42529043 . A G 3.98 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=46 PL:DP:SP:GT:GQ 33,6,0:2:0:1/1:49 | |
| 3496 chr10 42529724 . A C 3.55 . DP=4;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3497 chr10 42529918 . C G 46.3 . DP=16;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=41 PL:DP:SP:GT:GQ 79,15,0:5:0:1/1:75 | |
| 3498 chr10 42530405 . T C 5.54 . DP=4;AF1=1;CI95=0.5,1;DP4=0,1,1,2;MQ=31;PV4=1,0.019,1,1 PL:DP:SP:GT:GQ 35,5,0:4:0:1/1:46 | |
| 3499 chr10 42530624 . G A 41 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=5,2,2,5;MQ=28;PV4=0.29,0.00019,0.42,1 PL:DP:SP:GT:GQ 71,0,107:14:5:0/1:74 | |
| 3500 chr10 42530964 . c cTTTACACAGAGCAG 8.19 . INDEL;DP=4;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 3501 chr10 42531106 . T C 65 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=43 PL:DP:SP:GT:GQ 97,9,0:3:0:1/1:63 | |
| 3502 chr10 42531471 . A G 10.6 . DP=6;AF1=1;CI95=0.5,1;DP4=0,1,0,4;MQ=18;PV4=1,1,1,0.25 PL:DP:SP:GT:GQ 42,8,0:5:0:1/1:56 | |
| 3503 chr10 42531944 . A G 49 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=5,7,5,3;MQ=34;PV4=0.65,0.25,0.0024,0.15 PL:DP:SP:GT:GQ 79,0,253:20:2:0/1:82 | |
| 3504 chr10 42532427 . A G 18.8 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=46 PL:DP:SP:GT:GQ 50,6,0:2:0:1/1:49 | |
| 3505 chr10 42532819 . G C 4.77 . DP=5;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 3506 chr10 42532887 . T A 5.83 . DP=2;AF1=0.5718;CI95=0.5,1;DP4=0,1,0,1;MQ=30;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,6:2:0:0/1:8 | |
| 3507 chr10 42537941 . C G 55.1 . DP=15;AF1=0.5102;CI95=0.5,0.5;DP4=1,0,3,2;MQ=48;PV4=1,0.18,0.23,1 PL:DP:SP:GT:GQ 85,0,14:6:0:0/1:17 | |
| 3508 chr10 42539736 . C A 24.3 . DP=9;AF1=1;CI95=0.5,1;DP4=0,0,1,4;MQ=26 PL:DP:SP:GT:GQ 57,15,0:5:0:1/1:75 | |
| 3509 chr10 42617912 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 3510 chr10 42638249 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3511 chr10 42649842 . T G 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3512 chr10 42662174 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3513 chr10 42663181 . T G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 3514 chr10 42664166 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 3515 chr10 42670559 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 3516 chr10 42717110 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 3517 chr10 42739719 . t tGCGATCCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3518 chr10 42746452 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3519 chr10 42746477 . C T 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3520 chr10 42770288 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 3521 chr10 42791650 . aa aAAGACTCCCa 12.7 . INDEL;DP=5;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3522 chr10 42793629 . t tAGTA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3523 chr10 42793799 . G A 5.46 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 3524 chr10 42795896 . G A 8.44 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 39,6,0:2:0:1/1:49 | |
| 3525 chr10 42797282 . t tGACGG 5.12 . INDEL;DP=10;AF1=0.5063;CI95=0.5,0.5;DP4=1,0,0,1;MQ=39;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,16:2:0:0/1:19 | |
| 3526 chr10 42798015 . T A 24.8 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=45 PL:DP:SP:GT:GQ 56,6,0:2:0:1/1:49 | |
| 3527 chr10 42798797 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 3528 chr10 42802633 . T G 6.02 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 36,6,0:2:0:1/1:49 | |
| 3529 chr10 42804371 . C G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 3530 chr10 42809901 . c cAAAAAG 8 . INDEL;DP=4;AF1=0.6243;CI95=0.5,1;DP4=1,0,1,0;MQ=36;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,4:2:0:0/1:6 | |
| 3531 chr10 42811018 . G A 5.46 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 3532 chr10 42811311 . A C 21.2 . DP=4;AF1=1;CI95=0.5,1;DP4=1,0,0,3;MQ=33;PV4=0.25,0.042,1,0.1 PL:DP:SP:GT:GQ 52,5,0:4:0:1/1:46 | |
| 3533 chr10 42811316 . A G 54.1 . DP=4;AF1=1;CI95=0.5,1;DP4=1,0,0,3;MQ=33;PV4=0.25,1,1,0.36 PL:DP:SP:GT:GQ 85,5,0:4:0:1/1:46 | |
| 3534 chr10 42811905 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3535 chr10 42812514 . aa aAGTCTa 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3536 chr10 42812885 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 3537 chr10 42813138 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3538 chr10 42814906 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 3539 chr10 42817576 . T C 15.1 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,2,1;MQ=36 PL:DP:SP:GT:GQ 47,9,0:3:0:1/1:63 | |
| 3540 chr10 42863555 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3541 chr10 42867100 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3542 chr10 42868005 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3543 chr10 42873273 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 3544 chr10 42879994 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 3545 chr10 42891587 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 3546 chr10 42899611 . TC TCACGACCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3547 chr10 42924958 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3548 chr10 42940931 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 3549 chr10 42997265 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 3550 chr10 43008833 . at aTAGt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3551 chr10 43017960 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3552 chr10 43037526 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3553 chr10 43049042 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3554 chr10 43062328 . T C 26.8 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=33 PL:DP:SP:GT:GQ 58,6,0:2:0:1/1:49 | |
| 3555 chr10 43062433 . G A 14.2 . DP=8;AF1=0.5;CI95=0.5,0.5;DP4=1,3,1,2;MQ=49;PV4=1,4.7e-05,0.48,0.27 PL:DP:SP:GT:GQ 44,0,152:7:0:0/1:47 | |
| 3556 chr10 43068662 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3557 chr10 43089326 . G C 37 . DP=13;AF1=0.5;CI95=0.5,0.5;DP4=2,3,2,2;MQ=39;PV4=1,0.011,0.11,0.27 PL:DP:SP:GT:GQ 67,0,138:9:0:0/1:70 | |
| 3558 chr10 43089391 . T TGCG 12.7 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3559 chr10 43089965 . G A 38 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,2,1;MQ=46 PL:DP:SP:GT:GQ 70,9,0:3:0:1/1:63 | |
| 3560 chr10 43090038 . A G 23 . DP=6;AF1=0.5;CI95=0.5,0.5;DP4=2,1,1,1;MQ=47;PV4=1,0.46,0.068,1 PL:DP:SP:GT:GQ 53,0,84:5:0:0/1:56 | |
| 3561 chr10 43097247 . C A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 3562 chr10 43132359 . A G 3.54 . DP=8;AF1=0.4999;CI95=0.5,0.5;DP4=1,1,2,0;MQ=49;PV4=1,0.47,0.21,0.39 PL:DP:SP:GT:GQ 31,0,35:4:0:0/1:33 | |
| 3563 chr10 43140983 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3564 chr10 43170551 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 3565 chr10 43179326 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 3566 chr10 43198633 . a aCCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3567 chr10 43207771 . ggt gGTTgt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3568 chr10 43209943 . G A 6.98 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 3569 chr10 43221269 . T G 13.3 . DP=3;AF1=0.5163;CI95=0.5,1;DP4=1,0,2,0;MQ=47;PV4=1,1,0.061,1 PL:DP:SP:GT:GQ 43,0,12:3:0:0/1:15 | |
| 3570 chr10 43265691 . CC CCTCTC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 3571 chr10 43276218 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3572 chr10 43280057 . CTTTTTTT CTTTTT 32.4 . INDEL;DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=44 PL:DP:SP:GT:GQ 72,9,0:3:0:1/1:63 | |
| 3573 chr10 43283666 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3574 chr10 43289283 . CT CTGGTT 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=1,1,0,1;MQ=50;PV4=1,1,1,0.12 PL:DP:SP:GT:GQ 41,0,58:3:0:0/1:44 | |
| 3575 chr10 43312954 . C G 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3576 chr10 43333271 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3577 chr10 43341976 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 3578 chr10 43363268 . TG TGCTACG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3579 chr10 43379710 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 3580 chr10 43389355 . A C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 3581 chr10 43411669 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 3582 chr10 43420821 . a aGTG 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 3583 chr10 43429880 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3584 chr10 43434585 . A T 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,36:2:0:0/1:34 | |
| 3585 chr10 43472310 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3586 chr10 43493134 . ctg cTGAGtg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3587 chr10 43493826 . atct aTCTGGTTtct 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3588 chr10 43494732 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3589 chr10 43517627 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3590 chr10 43534680 . C T 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3591 chr10 43559874 . TG TGAGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3592 chr10 43562360 . A AGACG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3593 chr10 43569238 . CTAC CTACGATAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3594 chr10 43584671 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 3595 chr10 43587660 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 3596 chr10 43595103 . C G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 3597 chr10 43595452 . ac aCAGGTTc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3598 chr10 43606687 . A G 99 . DP=48;AF1=1;CI95=1,1;DP4=1,1,11,14;MQ=46;PV4=1,1,0.029,1 PL:DP:SP:GT:GQ 255,28,0:27:0:1/1:99 | |
| 3599 chr10 43609152 . CA CAGGTCTTCGTGATA 43.7 . INDEL;DP=8;AF1=1;CI95=0.5,1;DP4=0,0,2,3;MQ=50 PL:DP:SP:GT:GQ 84,15,0:5:0:1/1:75 | |
| 3600 chr10 43609771 . G T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 3601 chr10 43612226 . C T 27.8 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=44 PL:DP:SP:GT:GQ 59,6,0:2:0:1/1:49 | |
| 3602 chr10 43613844 . C A 23 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=2,4,3,0;MQ=48;PV4=0.17,1,2.5e-05,0.25 PL:DP:SP:GT:GQ 53,0,114:9:8:0/1:56 | |
| 3603 chr10 43615343 . ct cTTt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3604 chr10 43617515 . T C 20 . DP=26;AF1=0.5;CI95=0.5,0.5;DP4=1,17,0,5;MQ=49;PV4=1,0.085,1.1e-05,0.25 PL:DP:SP:GT:GQ 50,0,234:23:0:0/1:53 | |
| 3605 chr10 43618248 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3606 chr10 43622217 . T C 10.2 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 41,6,0:2:0:1/1:49 | |
| 3607 chr10 43628044 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3608 chr10 43645859 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 3609 chr10 43649554 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3610 chr10 43659536 . C T 99 . DP=33;AF1=1;CI95=1,1;DP4=0,1,0,27;MQ=46;PV4=1,1,0.038,1 PL:DP:SP:GT:GQ 185,64,0:28:0:1/1:99 | |
| 3611 chr10 43666767 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3612 chr10 43669546 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3613 chr10 43675801 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 3614 chr10 43679006 . G A 7.8 . DP=8;AF1=0.5;CI95=0.5,0.5;DP4=0,5,0,2;MQ=49;PV4=1,0.29,0.0026,1 PL:DP:SP:GT:GQ 37,0,127:7:0:0/1:40 | |
| 3615 chr10 43681931 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3616 chr10 43690529 . CAGAG CAGAGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3617 chr10 43694394 . A C 24 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=7,2,5,0;MQ=49;PV4=0.51,0.42,0.032,0.44 PL:DP:SP:GT:GQ 54,0,128:14:3:0/1:57 | |
| 3618 chr10 43703001 . GC GCTC 7.35 . INDEL;DP=2;AF1=0.5008;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,25:2:0:0/1:28 | |
| 3619 chr10 43704103 . C CTAGTTGCCTAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3620 chr10 43711700 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3621 chr10 43728494 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 3622 chr10 43732376 . GT GTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3623 chr10 43736835 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3624 chr10 43749752 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 3625 chr10 43826758 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 3626 chr10 43830349 . c cT 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 3627 chr10 43832566 . AA AATGTCA 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 3628 chr10 43847427 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 3629 chr10 43868642 . G GTCA 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 3630 chr10 43870804 . C T 44 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,1;MQ=45 PL:DP:SP:GT:GQ 76,9,0:3:0:1/1:63 | |
| 3631 chr10 43870867 . A C 3.55 . DP=5;AF1=0.5018;CI95=0.5,0.5;DP4=1,0,2,0;MQ=49;PV4=1,0.032,0,0.46 PL:DP:SP:GT:GQ 31,0,21:3:0:0/1:24 | |
| 3632 chr10 43874891 . C T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 3633 chr10 43879183 . G C 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 3634 chr10 43883342 . T A 99 . DP=16;AF1=1;CI95=1,1;DP4=0,0,1,12;MQ=48 PL:DP:SP:GT:GQ 137,39,0:13:0:1/1:99 | |
| 3635 chr10 43889912 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 3636 chr10 43896259 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 3637 chr10 43915373 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 3638 chr10 43919439 . t tGCCTTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3639 chr10 43934178 . A G,C 10.4 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 52,15,40,12,0,40:2:0:1/1:41 | |
| 3640 chr10 43940942 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 3641 chr10 43981087 . c cAAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3642 chr10 43982327 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3643 chr10 44013972 . GAT G 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 3644 chr10 44019942 . A G 4.13 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3645 chr10 44041142 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3646 chr10 44053042 . T C 99 . DP=46;AF1=0.5;CI95=0.5,0.5;DP4=6,10,7,17;MQ=49;PV4=0.73,7.1e-10,0.0021,1 PL:DP:SP:GT:GQ 195,0,255:40:1:0/1:99 | |
| 3647 chr10 44102558 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3648 chr10 44104137 . G T 20 . DP=26;AF1=0.5;CI95=0.5,0.5;DP4=4,5,5,0;MQ=49;PV4=0.086,0.098,0.029,0.37 PL:DP:SP:GT:GQ 50,0,182:14:11:0/1:53 | |
| 3649 chr10 44136793 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 3650 chr10 44145526 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3651 chr10 44155861 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 3652 chr10 44170291 . GGC GGCGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3653 chr10 44177897 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 3654 chr10 44179482 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3655 chr10 44184338 . T A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 3656 chr10 44190879 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 3657 chr10 44191278 . GG GGGTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3658 chr10 44191818 . tgag tg 8.19 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 3659 chr10 44226264 . T TGTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3660 chr10 44232673 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3661 chr10 44232687 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3662 chr10 44242988 . G T 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 3663 chr10 44248624 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 3664 chr10 44249439 . AGGTGGGTGGGTGG AGGTGGGTGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3665 chr10 44249526 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 3666 chr10 44250778 . gat gATGAAAat 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 3667 chr10 44276102 . T C 13.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 3668 chr10 44288616 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3669 chr10 44295629 . TT TTGT 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 3670 chr10 44316880 . C A 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3671 chr10 44317332 . TGGAG TG 7.35 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 3672 chr10 44319884 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 3673 chr10 44339925 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 3674 chr10 44341514 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 3675 chr10 44363900 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3676 chr10 44380070 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3677 chr10 44387933 . G A 14.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 3678 chr10 44424998 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3679 chr10 44454783 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3680 chr10 44455189 . A AGAAGAGC 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 3681 chr10 44460138 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3682 chr10 44464859 . A T 18.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=38 PL:DP:SP:GT:GQ 50,6,0:2:0:1/1:49 | |
| 3683 chr10 44465433 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3684 chr10 44465502 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3685 chr10 44470477 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3686 chr10 44484628 . T G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 3687 chr10 44490026 . T G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 3688 chr10 44494317 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 3689 chr10 44499943 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3690 chr10 44500486 . G T 6.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 3691 chr10 44501764 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3692 chr10 44505566 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 3693 chr10 44505636 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3694 chr10 44506943 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 3695 chr10 44536734 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 3696 chr10 44549219 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3697 chr10 44550060 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 3698 chr10 44550155 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 3699 chr10 44557690 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3700 chr10 44558990 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 3701 chr10 44565281 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 3702 chr10 44575828 . C A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 3703 chr10 44582491 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3704 chr10 44599389 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3705 chr10 44611643 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3706 chr10 44627141 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3707 chr10 44628222 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3708 chr10 44628568 . GAG GAGTCAG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 3709 chr10 44652722 . g gAGGCCGA 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 3710 chr10 44657839 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3711 chr10 44665846 . A G 3.12 . DP=2;AF1=0.5261;CI95=0.5,0.5;DP4=1,0,0,1;MQ=48;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,10:2:0:0/1:13 | |
| 3712 chr10 44706922 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 3713 chr10 44716951 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 3714 chr10 44737343 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3715 chr10 44748552 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3716 chr10 44789852 . ca cAAGa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3717 chr10 44798482 . T C 41.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=43 PL:DP:SP:GT:GQ 73,6,0:2:0:1/1:49 | |
| 3718 chr10 44841390 . tt tTAt 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 3719 chr10 44851317 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 3720 chr10 44856590 . CA CAAACCTAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3721 chr10 44866846 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 3722 chr10 44875023 . T A 5.46 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 3723 chr10 44883780 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3724 chr10 44885304 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 3725 chr10 44898124 . CT CTACCTAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3726 chr10 44916335 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 3727 chr10 44918508 . T TTTTTAAG 7.37 . INDEL;DP=2;AF1=0.5025;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,20:2:0:0/1:23 | |
| 3728 chr10 44923842 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3729 chr10 44935131 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 3730 chr10 44940549 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3731 chr10 44948819 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 3732 chr10 44950065 . g gCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3733 chr10 44955731 . A T 3.62 . DP=2;AF1=0.5161;CI95=0.5,0.5;DP4=1,0,0,1;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,12:2:0:0/1:15 | |
| 3734 chr10 44964200 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 3735 chr10 45005498 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3736 chr10 45032205 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3737 chr10 45034260 . G A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 3738 chr10 45041383 . A C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 3739 chr10 45044661 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3740 chr10 45060304 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 3741 chr10 45074219 . CTGGGG C 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3742 chr10 45085333 . A AC 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 3743 chr10 45102051 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 3744 chr10 45117471 . T A 4.14 . DP=2;AF1=0.5018;CI95=0.5,0.5;DP4=1,0,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,21:2:0:0/1:24 | |
| 3745 chr10 45124156 . GAT GATAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3746 chr10 45137637 . A C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 3747 chr10 45141469 . A AGCTCTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3748 chr10 45192401 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 3749 chr10 45200119 . G C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 3750 chr10 45211911 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3751 chr10 45212777 . C G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 3752 chr10 45228584 . CAT CATAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3753 chr10 45251984 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3754 chr10 45270221 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 3755 chr10 45291414 . GTG GTGCTG 9.05 . INDEL;DP=4;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 3756 chr10 45297721 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3757 chr10 45306382 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 3758 chr10 45307947 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 3759 chr10 45314905 . A C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 3760 chr10 45329810 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3761 chr10 45348909 . G GCACT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3762 chr10 45353169 . G C 6.2 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,44:2:0:0/1:37 | |
| 3763 chr10 45357413 . A T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 3764 chr10 45360778 . T G 11.1 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=49 PL:DP:SP:GT:GQ 42,6,0:2:0:1/1:49 | |
| 3765 chr10 45371695 . tcttccttcc tcttcc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3766 chr10 45382783 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 3767 chr10 45391481 . A G 31.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=46 PL:DP:SP:GT:GQ 63,6,0:2:0:1/1:49 | |
| 3768 chr10 45401799 . A C 4.13 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,31:2:0:0/1:31 | |
| 3769 chr10 45406291 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 3770 chr10 45423282 . C G 22 . DP=10;AF1=0.5;CI95=0.5,0.5;DP4=4,0,3,0;MQ=48;PV4=1,0.0035,0.047,1 PL:DP:SP:GT:GQ 52,0,134:7:0:0/1:55 | |
| 3771 chr10 45429229 . GA GACA 3.25 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=3,0,0,1;MQ=50;PV4=0.25,1,1,0.19 PL:DP:SP:GT:GQ 38,0,112:4:0:0/1:41 | |
| 3772 chr10 45430605 . C T 59 . DP=8;AF1=0.5001;CI95=0.5,0.5;DP4=1,0,2,2;MQ=47;PV4=1,0.013,0.19,1 PL:DP:SP:GT:GQ 89,0,35:5:0:0/1:38 | |
| 3773 chr10 45431416 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3774 chr10 45432775 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3775 chr10 45438749 . a aCCTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3776 chr10 45465135 . catttaca c 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3777 chr10 45465827 . G A 16.1 . DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,2;MQ=47;PV4=1,0.093,0.24,0.47 PL:DP:SP:GT:GQ 46,0,41:3:0:0/1:43 | |
| 3778 chr10 45471550 . GAG GAGTGCTGTGATAG 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 3779 chr10 45472575 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 3780 chr10 45472968 . G T 3.01 . DP=14;AF1=0.4997;CI95=0.5,0.5;DP4=1,3,0,2;MQ=49;PV4=1,0.074,0.054,0.37 PL:DP:SP:GT:GQ 30,0,130:6:0:0/1:33 | |
| 3781 chr10 45473552 . C T 13.9 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 45,6,0:2:0:1/1:49 | |
| 3782 chr10 45474836 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 3783 chr10 45474987 . gtg gTGAtg 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 3784 chr10 45523552 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3785 chr10 45526716 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 3786 chr10 45533610 . t tAGTAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3787 chr10 45533749 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 3788 chr10 45559589 . G C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 3789 chr10 45566128 . ttgccttg t 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3790 chr10 45603879 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 3791 chr10 45612946 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3792 chr10 45622885 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 3793 chr10 45635684 . C T 32.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=44 PL:DP:SP:GT:GQ 64,6,0:2:0:1/1:49 | |
| 3794 chr10 45644370 . G T 3.18 . DP=2;AF1=0.5428;CI95=0.5,1;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,8:2:0:0/1:11 | |
| 3795 chr10 45645977 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 3796 chr10 45647113 . CT CTAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3797 chr10 45689646 . A G 5.46 . DP=4;AF1=0.5001;CI95=0.5,0.5;DP4=2,0,1,0;MQ=48;PV4=1,1,0,1 PL:DP:SP:GT:GQ 34,0,32:3:0:0/1:33 | |
| 3798 chr10 45705113 . at aTAATTGGTTGCt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3799 chr10 45716515 . AT ATGGCT 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=49 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 3800 chr10 45717530 . T TCAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3801 chr10 45720069 . G GTTAA 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 3802 chr10 45737766 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 3803 chr10 45758378 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3804 chr10 45773874 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3805 chr10 45782687 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 3806 chr10 45793250 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3807 chr10 45799375 . CGG CGGTGG 12.7 . INDEL;DP=6;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3808 chr10 45799379 . TG TGGG 12.7 . INDEL;DP=5;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3809 chr10 45813917 . t tTCGTG 7.35 . INDEL;DP=2;AF1=0.5008;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,25:2:0:0/1:28 | |
| 3810 chr10 45840772 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 3811 chr10 45848162 . T TCGGGACCTG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3812 chr10 45872281 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 3813 chr10 45878220 . A ATCTCC 7.35 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 3814 chr10 45879316 . GG GGGAGAGAAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3815 chr10 45886447 . t tTA 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 3816 chr10 45902353 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 3817 chr10 45912676 . T TAGCAC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 3818 chr10 45924023 . G A 80 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,2,1;MQ=43 PL:DP:SP:GT:GQ 112,9,0:3:0:1/1:63 | |
| 3819 chr10 45928793 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3820 chr10 45935944 . T G 3.54 . DP=20;AF1=0.4998;CI95=0.5,0.5;DP4=10,1,0,4;MQ=48;PV4=0.0037,0.013,0.0004,0.093 PL:DP:SP:GT:GQ 31,0,210:15:24:0/1:34 | |
| 3821 chr10 45937497 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 3822 chr10 45937950 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 3823 chr10 45941208 . TCTG TTCAACCTG 12.7 . INDEL;DP=7;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3824 chr10 45948059 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3825 chr10 45953142 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3826 chr10 45956923 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3827 chr10 45971186 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 3828 chr10 45975232 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3829 chr10 45979921 . T TTG 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 3830 chr10 46011254 . C T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 3831 chr10 46017823 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3832 chr10 46054672 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 3833 chr10 46065194 . ca cAGa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3834 chr10 46082880 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3835 chr10 46087265 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 3836 chr10 46101701 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 3837 chr10 46113641 . A ACAT 3.25 . INDEL;DP=10;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,94:4:0:0/1:41 | |
| 3838 chr10 46145384 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 3839 chr10 46152891 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 3840 chr10 46187520 . G A,T 7.8 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,2,0;MQ=46 PL:DP:SP:GT:GQ 53,19,37,16,0,37:2:0:1/1:41 | |
| 3841 chr10 46214798 . G A 3.41 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=49 PL:DP:SP:GT:GQ 32,6,0:2:0:1/1:49 | |
| 3842 chr10 46216642 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3843 chr10 46221121 . A C 6.22 . DP=19;AF1=0.5031;CI95=0.5,0.5;DP4=1,0,4,0;MQ=49;PV4=1,0.0064,0.22,1 PL:DP:SP:GT:GQ 35,0,19:5:0:0/1:22 | |
| 3844 chr10 46221290 . C CTA 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,1,1,0.25 PL:DP:SP:GT:GQ 41,0,79:3:0:0/1:44 | |
| 3845 chr10 46221395 . T G 4.13 . DP=7;AF1=0.5;CI95=0.5,0.5;DP4=2,0,2,0;MQ=49;PV4=1,1,0.21,1 PL:DP:SP:GT:GQ 32,0,31:4:0:0/1:31 | |
| 3846 chr10 46226661 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 3847 chr10 46272866 . C T 16.1 . DP=6;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,3;MQ=48;PV4=1,0.064,0.13,1 PL:DP:SP:GT:GQ 46,0,48:5:0:0/1:47 | |
| 3848 chr10 46279978 . C CCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3849 chr10 46280411 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3850 chr10 46282056 . A T 3.54 . DP=4;AF1=0.4998;CI95=0.5,0.5;DP4=2,0,0,1;MQ=47;PV4=0.33,0.2,0,0.061 PL:DP:SP:GT:GQ 31,0,79:3:0:0/1:34 | |
| 3851 chr10 46585323 . T C 8.65 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 3852 chr10 46778853 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3853 chr10 46846010 . CATA C 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 3854 chr10 46962720 . G GTGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3855 chr10 46968074 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 3856 chr10 46977090 . G A 10.4 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 3857 chr10 46998795 . A G 65 . DP=13;AF1=0.5;CI95=0.5,0.5;DP4=5,0,7,0;MQ=48;PV4=1,0.0058,0.26,0.15 PL:DP:SP:GT:GQ 95,0,134:12:0:0/1:98 | |
| 3858 chr10 46998894 . G A 99 . DP=30;AF1=0.5;CI95=0.5,0.5;DP4=0,5,0,21;MQ=46;PV4=1,7.8e-10,0.0016,0.15 PL:DP:SP:GT:GQ 153,0,112:26:0:0/1:99 | |
| 3859 chr10 46999465 . A G 34 . DP=20;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,7;MQ=49;PV4=1,0.0044,0.081,0.47 PL:DP:SP:GT:GQ 64,0,100:11:0:0/1:67 | |
| 3860 chr10 46999591 . CATGAGGGAG CATGAGGGAGATGAGGGAG 99 . INDEL;DP=25;AF1=1;CI95=1,1;DP4=0,0,6,6;MQ=50 PL:DP:SP:GT:GQ 255,36,0:12:0:1/1:99 | |
| 3861 chr10 46999604 . A G 12.3 . DP=32;AF1=0.5;CI95=0.5,0.5;DP4=5,0,4,0;MQ=49;PV4=1,0.11,0.16,1 PL:DP:SP:GT:GQ 42,0,85:9:0:0/1:45 | |
| 3862 chr10 46999604 . AGGG AGGGAGGTGGGGG 99 . INDEL;DP=32;AF1=1;CI95=1,1;DP4=0,0,11,8;MQ=50 PL:DP:SP:GT:GQ 255,57,0:19:0:1/1:99 | |
| 3863 chr10 46999747 . T C 80 . DP=66;AF1=0.5;CI95=0.5,0.5;DP4=10,11,3,13;MQ=49;PV4=0.091,1.1e-09,0.0043,1 PL:DP:SP:GT:GQ 110,0,255:37:10:0/1:99 | |
| 3864 chr10 47000004 . T C 99 . DP=31;AF1=1;CI95=0.5,1;DP4=2,1,7,11;MQ=49;PV4=0.55,1,0.14,1 PL:DP:SP:GT:GQ 177,4,0:21:3:1/1:45 | |
| 3865 chr10 47000665 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 3866 chr10 47002501 . T A 18.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 50,6,0:2:0:1/1:49 | |
| 3867 chr10 47014555 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3868 chr10 47020220 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 3869 chr10 47021503 . G T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 3870 chr10 47024534 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3871 chr10 47027997 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 3872 chr10 47031932 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 3873 chr10 47032690 . A G 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 3874 chr10 47041398 . ggt gGTCTgt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3875 chr10 47043130 . CCAC CC 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 3876 chr10 47044008 . CAG CAGTTGGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3877 chr10 47056686 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 3878 chr10 47058946 . tacaca tACacaca 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3879 chr10 47059320 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3880 chr10 47074268 . C T 6.2 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,44:2:0:0/1:37 | |
| 3881 chr10 47074891 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 3882 chr10 47079584 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3883 chr10 47084755 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3884 chr10 47087608 . T C 70.1 . DP=37;AF1=0.9966;CI95=0.5,1;DP4=0,1,1,7;MQ=48;PV4=1,0.29,0.18,1 PL:DP:SP:GT:GQ 99,1,0:9:0:1/1:23 | |
| 3885 chr10 47087680 . C T 99 . DP=35;AF1=0.5;CI95=0.5,0.5;DP4=6,8,8,9;MQ=47;PV4=1,4.2e-08,6.6e-07,1 PL:DP:SP:GT:GQ 223,0,255:31:0:0/1:99 | |
| 3886 chr10 47087731 . C T 99 . DP=50;AF1=0.5;CI95=0.5,0.5;DP4=4,8,17,10;MQ=49;PV4=0.16,2.6e-12,0.046,0.084 PL:DP:SP:GT:GQ 146,0,255:39:8:0/1:99 | |
| 3887 chr10 47094530 . ggg gGGGATTgg 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 3888 chr10 47094986 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 3889 chr10 47095137 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 3890 chr10 47101793 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 3891 chr10 47103879 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3892 chr10 47104580 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3893 chr10 47109866 . G A 5.49 . DP=2;AF1=0.5049;CI95=0.5,0.5;DP4=0,1,1,0;MQ=43;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,17:2:0:0/1:20 | |
| 3894 chr10 47109871 . A T 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3895 chr10 47111235 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3896 chr10 47123244 . A G 14.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=48 PL:DP:SP:GT:GQ 46,6,0:2:0:1/1:49 | |
| 3897 chr10 47127609 . T TCCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3898 chr10 47127850 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 3899 chr10 47127997 . A G 3.41 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=50 PL:DP:SP:GT:GQ 32,6,0:2:0:1/1:49 | |
| 3900 chr10 47128293 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 3901 chr10 47129799 . AT ATACACTCT 7.35 . INDEL;DP=2;AF1=0.5001;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,34:2:0:0/1:37 | |
| 3902 chr10 47131673 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 3903 chr10 47133865 . A C 5.46 . DP=12;AF1=0.4999;CI95=0.5,0.5;DP4=2,6,2,0;MQ=45;PV4=0.13,0.045,1,0.24 PL:DP:SP:GT:GQ 34,0,224:10:9:0/1:37 | |
| 3904 chr10 47136012 . T C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 3905 chr10 47137976 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 3906 chr10 47164351 . CAG CAGAAAGAAG 3.25 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=2,1,0,1;MQ=50;PV4=1,1,1,0.17 PL:DP:SP:GT:GQ 38,0,129:4:0:0/1:41 | |
| 3907 chr10 47192966 . T C 5.46 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 3908 chr10 47544075 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 3909 chr10 47558033 . ctctg cTCTGAtctg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3910 chr10 47563241 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3911 chr10 47564173 . C CTTG 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 3912 chr10 47599038 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 3913 chr10 47617437 . C CCAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3914 chr10 47621406 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 3915 chr10 47628941 . caca c 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 3916 chr10 47629841 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 3917 chr10 47644228 . A ATG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3918 chr10 47653718 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3919 chr10 47668900 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 3920 chr10 47697933 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 3921 chr10 47728608 . T C 43 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=5,2,2,2;MQ=32;PV4=0.58,1,1,1 PL:DP:SP:GT:GQ 73,0,67:11:2:0/1:69 | |
| 3922 chr10 47943744 . G C 11.1 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=46 PL:DP:SP:GT:GQ 42,6,0:2:0:1/1:49 | |
| 3923 chr10 47948863 . G T 3.01 . DP=8;AF1=0.4998;CI95=0.5,0.5;DP4=0,2,0,2;MQ=49;PV4=1,0.2,0.092,0.42 PL:DP:SP:GT:GQ 30,0,40:4:0:0/1:33 | |
| 3924 chr10 48120395 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3925 chr10 48145505 . T G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 3926 chr10 48147163 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3927 chr10 48158664 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3928 chr10 48159819 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 3929 chr10 48163599 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3930 chr10 48171896 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3931 chr10 48237184 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 3932 chr10 48321236 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3933 chr10 48335126 . G GTCTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3934 chr10 48338175 . A T 8.65 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 3935 chr10 48338527 . G A 54.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=43 PL:DP:SP:GT:GQ 86,6,0:2:0:1/1:49 | |
| 3936 chr10 48352352 . T A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 3937 chr10 48362906 . A ATCTG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3938 chr10 48364749 . T A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 3939 chr10 48382347 . T C 6.2 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,44:2:0:0/1:37 | |
| 3940 chr10 48382641 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 3941 chr10 48386110 . T C 68 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=0,7,0,8;MQ=48;PV4=1,0.027,0.00024,1 PL:DP:SP:GT:GQ 98,0,150:15:0:0/1:99 | |
| 3942 chr10 48387691 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 3943 chr10 48388348 . T G 9.52 . DP=5;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,2;MQ=48;PV4=0.33,0.12,0.33,0.33 PL:DP:SP:GT:GQ 39,0,41:3:0:0/1:40 | |
| 3944 chr10 48388917 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3945 chr10 48406278 . G GCTTGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3946 chr10 48414569 . C CGTG 56.4 . INDEL;DP=24;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=50 PL:DP:SP:GT:GQ 96,9,0:3:0:1/1:63 | |
| 3947 chr10 48414570 . A G 81 . DP=23;AF1=0.5003;CI95=0.5,0.5;DP4=1,1,0,18;MQ=47;PV4=0.1,0.00023,0.0076,1 PL:DP:SP:GT:GQ 111,0,29:20:0:0/1:32 | |
| 3948 chr10 48417641 . CCCTGC CC 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 3949 chr10 48426251 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3950 chr10 48426259 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3951 chr10 48429445 . CT CTACCCGGT 5.08 . INDEL;DP=8;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,83:3:0:0/1:44 | |
| 3952 chr10 48429650 . G A 71 . DP=11;AF1=1;CI95=1,1;DP4=0,0,0,9;MQ=49 PL:DP:SP:GT:GQ 104,27,0:9:0:1/1:99 | |
| 3953 chr10 48434219 . A ATTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3954 chr10 48435104 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3955 chr10 48452870 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 3956 chr10 48453814 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3957 chr10 48480371 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3958 chr10 48484621 . AAGAGA AAGA 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 3959 chr10 48493162 . GG GGTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3960 chr10 48493855 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3961 chr10 48495558 . G T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 3962 chr10 48508746 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3963 chr10 48510351 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3964 chr10 48511457 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 3965 chr10 48511889 . TG TGTGACTCGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3966 chr10 48514446 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3967 chr10 48528205 . gccg gCCGAccg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3968 chr10 48538590 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 3969 chr10 48545685 . C CACAG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 3970 chr10 48547421 . caga c 5.08 . INDEL;DP=4;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 3971 chr10 48553108 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3972 chr10 48557614 . CCT C 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 3973 chr10 48579612 . C CA 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 3974 chr10 48589150 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3975 chr10 48598126 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3976 chr10 48611167 . T A 5.46 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 3977 chr10 48612169 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 3978 chr10 48621719 . CT CTTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3979 chr10 48636232 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 3980 chr10 48652334 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3981 chr10 48652948 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 3982 chr10 48843163 . A AATGAAAAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 3983 chr10 48902786 . CTGA C 4.42 . INDEL;DP=6;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,0.44,1,0.05 PL:DP:SP:GT:GQ 40,0,67:3:0:0/1:43 | |
| 3984 chr10 49313245 . C T 22.8 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=45 PL:DP:SP:GT:GQ 54,6,0:2:0:1/1:49 | |
| 3985 chr10 49363771 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 3986 chr10 49371755 . A T 4.13 . DP=3;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 3987 chr10 49388095 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 3988 chr10 49392575 . C G 18 . DP=24;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=48 PL:DP:SP:GT:GQ 50,9,0:3:0:1/1:63 | |
| 3989 chr10 49393002 . C G 3.12 . DP=5;AF1=0.5261;CI95=0.5,0.5;DP4=0,1,0,2;MQ=48;PV4=1,1,1,0.38 PL:DP:SP:GT:GQ 30,0,10:3:0:0/1:13 | |
| 3990 chr10 49395825 . T TCGG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 3991 chr10 49396836 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 3992 chr10 49420008 . T C 27.3 . DP=20;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=50 PL:DP:SP:GT:GQ 60,15,0:5:0:1/1:75 | |
| 3993 chr10 49438593 . agg aGGgg 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 3994 chr10 49438725 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 3995 chr10 49440168 . C T 93 . DP=33;AF1=0.5;CI95=0.5,0.5;DP4=12,11,7,2;MQ=48;PV4=0.25,0.00012,0.00035,1 PL:DP:SP:GT:GQ 123,0,255:32:6:0/1:99 | |
| 3996 chr10 49440215 . C T 99 . DP=46;AF1=0.5;CI95=0.5,0.5;DP4=6,14,5,19;MQ=48;PV4=0.51,1.4e-13,2e-09,1 PL:DP:SP:GT:GQ 216,0,255:44:3:0/1:99 | |
| 3997 chr10 49445675 . A G 27.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=46 PL:DP:SP:GT:GQ 59,6,0:2:0:1/1:49 | |
| 3998 chr10 49446204 . T C 99 . DP=20;AF1=0.5;CI95=0.5,0.5;DP4=1,9,0,9;MQ=47;PV4=1,3.7e-06,9.9e-14,1 PL:DP:SP:GT:GQ 146,0,252:19:0:0/1:99 | |
| 3999 chr10 49447549 . A T 5.47 . DP=2;AF1=0.5012;CI95=0.5,0.5;DP4=1,0,1,0;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,23:2:0:0/1:26 | |
| 4000 chr10 49454605 . G C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 4001 chr10 49459712 . C A 3.54 . DP=20;AF1=0.4998;CI95=0.5,0.5;DP4=0,4,4,0;MQ=48;PV4=0.029,0.28,0.074,0.32 PL:DP:SP:GT:GQ 31,0,57:8:15:0/1:34 | |
| 4002 chr10 49472270 . t tTA 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 4003 chr10 49493925 . tcc tCCACcc 7.36 . INDEL;DP=2;AF1=0.5012;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,23:2:0:0/1:26 | |
| 4004 chr10 49502319 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4005 chr10 49502656 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 4006 chr10 49503671 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4007 chr10 49516183 . TGC TGCGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4008 chr10 49522353 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4009 chr10 49537181 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 4010 chr10 49544643 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 4011 chr10 49575993 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4012 chr10 49607440 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4013 chr10 49612202 . G GAGTTCATT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 4014 chr10 49613040 . T TTCGGACA 6.55 . INDEL;DP=8;AF1=0.5001;CI95=0.5,0.5;DP4=0,1,0,1;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 43,0,34:2:0:0/1:36 | |
| 4015 chr10 49615006 . G A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 4016 chr10 49624481 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4017 chr10 49661341 . A G 85 . DP=21;AF1=0.5;CI95=0.5,0.5;DP4=6,3,4,4;MQ=49;PV4=0.64,0.00054,0.0059,1 PL:DP:SP:GT:GQ 115,0,249:17:2:0/1:99 | |
| 4018 chr10 49671931 . CA CAA 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 4019 chr10 49673839 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4020 chr10 49677027 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4021 chr10 49706639 . G A 27.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=45 PL:DP:SP:GT:GQ 59,6,0:2:0:1/1:49 | |
| 4022 chr10 49716509 . C T 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4023 chr10 49775869 . TGAGAG TGAGAGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4024 chr10 49778727 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4025 chr10 49779502 . g gTCGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4026 chr10 49788472 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4027 chr10 49790464 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 4028 chr10 49792111 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4029 chr10 49792307 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4030 chr10 49796947 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 4031 chr10 49804418 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4032 chr10 49805556 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 4033 chr10 49806896 . G GGGAGGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4034 chr10 49812915 . CCT C 3.25 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4035 chr10 49815477 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4036 chr10 49817592 . G T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 4037 chr10 49822618 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4038 chr10 49835769 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 4039 chr10 49861250 . C G 18.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=48 PL:DP:SP:GT:GQ 50,6,0:2:0:1/1:49 | |
| 4040 chr10 49864611 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4041 chr10 49873845 . C T 33 . DP=8;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,4;MQ=41;PV4=1,0.26,0.046,1 PL:DP:SP:GT:GQ 63,0,71:7:0:0/1:65 | |
| 4042 chr10 49887632 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4043 chr10 49892123 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4044 chr10 49909833 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4045 chr10 49946769 . G A 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,0,1;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 4046 chr10 49949703 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 4047 chr10 49964394 . tg tGCg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4048 chr10 49979733 . C T 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 4049 chr10 49985212 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4050 chr10 49987364 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4051 chr10 49997469 . C T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 4052 chr10 50022425 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4053 chr10 50056688 . CAAA C 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4054 chr10 50105552 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 4055 chr10 50113723 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4056 chr10 50116399 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=46 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4057 chr10 50121964 . G A 35.5 . DP=43;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=48 PL:DP:SP:GT:GQ 68,12,0:4:0:1/1:72 | |
| 4058 chr10 50127075 . a aCCAT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 4059 chr10 50132096 . TC TCGTGACAC 9.94 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=47 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 4060 chr10 50132527 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4061 chr10 50150531 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4062 chr10 50171448 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4063 chr10 50176009 . T G 3.06 . DP=2;AF1=0.5099;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,14:2:0:0/1:17 | |
| 4064 chr10 50179834 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 4065 chr10 50186788 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 4066 chr10 50203050 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4067 chr10 50216982 . CATTAAT CAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4068 chr10 50227785 . T C 28.5 . DP=29;AF1=1;CI95=0.5,1;DP4=0,0,1,3;MQ=49 PL:DP:SP:GT:GQ 61,12,0:4:0:1/1:72 | |
| 4069 chr10 50227927 . C A 22.5 . DP=9;AF1=1;CI95=0.5,1;DP4=0,1,0,6;MQ=48;PV4=1,1,1,1 PL:DP:SP:GT:GQ 54,7,0:7:0:1/1:57 | |
| 4070 chr10 50232180 . A G 13.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 4071 chr10 50238272 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4072 chr10 50239177 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4073 chr10 50243890 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4074 chr10 50245321 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4075 chr10 50251101 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 4076 chr10 50253206 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4077 chr10 50260337 . aa aAGGGGGTa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4078 chr10 50266178 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4079 chr10 50292705 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4080 chr10 50306500 . TTC TTCTCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4081 chr10 50323205 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 4082 chr10 50329298 . ct cTAt 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=48 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 4083 chr10 50341635 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 4084 chr10 50342551 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4085 chr10 50351039 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4086 chr10 50351303 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4087 chr10 50371327 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4088 chr10 50379773 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 4089 chr10 50380466 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4090 chr10 50432073 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4091 chr10 50436441 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4092 chr10 50442485 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4093 chr10 50443038 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 4094 chr10 50450715 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 4095 chr10 50462542 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4096 chr10 50468072 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4097 chr10 50469793 . ATTTT ATT 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 4098 chr10 50484369 . G A 6.98 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4099 chr10 50490564 . A AGAAG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 4100 chr10 50513709 . TGC TGCGC 7.35 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,43:2:0:0/1:43 | |
| 4101 chr10 50520717 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 4102 chr10 50540616 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4103 chr10 50545048 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4104 chr10 50550762 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4105 chr10 50564271 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4106 chr10 50574479 . G GTGA 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 4107 chr10 50578474 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 4108 chr10 50601337 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4109 chr10 50619130 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4110 chr10 50643075 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4111 chr10 50649439 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4112 chr10 50667627 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4113 chr10 50678231 . ATTTTTT ATGGTGCTTTTTT 5.09 . INDEL;DP=26;AF1=0.5016;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,22:3:0:0/1:25 | |
| 4114 chr10 50678237 . TG TCTACAG 5.08 . INDEL;DP=23;AF1=0.5002;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,30:3:0:0/1:33 | |
| 4115 chr10 50678717 . T C 99 . DP=55;AF1=0.5;CI95=0.5,0.5;DP4=17,17,5,12;MQ=49;PV4=0.23,8.9e-17,2.7e-10,1 PL:DP:SP:GT:GQ 169,0,255:51:6:0/1:99 | |
| 4116 chr10 50680932 . TTAAAA TTCTAAAA 12.7 . INDEL;DP=8;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4117 chr10 50691360 . T C 12.2 . DP=12;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=49 PL:DP:SP:GT:GQ 44,9,0:3:0:1/1:63 | |
| 4118 chr10 50692139 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4119 chr10 50692154 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4120 chr10 50693350 . C T 13.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 4121 chr10 50724016 . C T 7.59 . DP=12;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=49 PL:DP:SP:GT:GQ 38,6,0:2:0:1/1:49 | |
| 4122 chr10 50733398 . t tCTAC 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 4123 chr10 50739116 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 4124 chr10 50740876 . G C 99 . DP=39;AF1=0.5;CI95=0.5,0.5;DP4=7,12,9,8;MQ=49;PV4=0.5,7e-10,0.0021,0.14 PL:DP:SP:GT:GQ 166,0,255:36:3:0/1:99 | |
| 4125 chr10 50772493 . ccaatcaat ccaat 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4126 chr10 50777411 . g gGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4127 chr10 50778727 . T TGGGG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 4128 chr10 50781860 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4129 chr10 50782410 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 4130 chr10 50808727 . C G 28.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=44 PL:DP:SP:GT:GQ 60,6,0:2:0:1/1:49 | |
| 4131 chr10 50820345 . C A 79.8 . DP=10;AF1=0.95;CI95=0.5,1;DP4=0,1,8,0;MQ=47;PV4=0.11,1,0.13,1 PL:DP:SP:GT:GQ 108,0,0:9:0:1/1:10 | |
| 4132 chr10 50821604 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4133 chr10 50856652 . G A 43 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=0,7,1,2;MQ=47;PV4=0.3,0.088,8.8e-05,1 PL:DP:SP:GT:GQ 73,0,173:10:0:0/1:76 | |
| 4134 chr10 50859443 . C CGCAGTCAGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4135 chr10 50869585 . G T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4136 chr10 50881015 . C T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4137 chr10 50888635 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4138 chr10 50888739 . gg gGAACAAg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4139 chr10 50892638 . ct cTAAGt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4140 chr10 50902684 . C T 99 . DP=28;AF1=0.5;CI95=0.5,0.5;DP4=0,7,0,15;MQ=47;PV4=1,0.017,0.038,1 PL:DP:SP:GT:GQ 138,0,126:22:0:0/1:99 | |
| 4141 chr10 50916834 . G A 9.31 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 4142 chr10 50920463 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4143 chr10 50943187 . TG TGTGGG 12.7 . INDEL;DP=4;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4144 chr10 50943189 . G T 3.98 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 33,6,0:2:0:1/1:49 | |
| 4145 chr10 50944009 . T C 22 . DP=4;AF1=0.5;CI95=0.5,0.5;DP4=1,0,2,0;MQ=47;PV4=1,0.22,0.29,0.17 PL:DP:SP:GT:GQ 52,0,41:3:0:0/1:44 | |
| 4146 chr10 50944160 . C T 4.77 . DP=16;AF1=0.4999;CI95=0.5,0.5;DP4=3,4,0,3;MQ=49;PV4=0.47,0.012,0.021,1 PL:DP:SP:GT:GQ 33,0,225:10:3:0/1:36 | |
| 4147 chr10 50945953 . G T 14.2 . DP=6;AF1=0.5001;CI95=0.5,0.5;DP4=0,2,0,3;MQ=49;PV4=1,0.13,0.12,0.36 PL:DP:SP:GT:GQ 44,0,34:5:0:0/1:37 | |
| 4148 chr10 50950976 . G A 99 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=0,7,4,4;MQ=46;PV4=0.077,0.02,0,1 PL:DP:SP:GT:GQ 220,0,173:15:11:0/1:99 | |
| 4149 chr10 50955057 . TCCCCC TCCC 4.42 . INDEL;DP=12;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 4150 chr10 50955063 . A AACCCCCCC 4.42 . INDEL;DP=10;AF1=0.5001;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,1,0,1 PL:DP:SP:GT:GQ 40,0,33:3:0:0/1:35 | |
| 4151 chr10 50957740 . C G 12 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 43,6,0:2:0:1/1:49 | |
| 4152 chr10 50971301 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4153 chr10 51023494 . T C 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,43:2:0:0/1:36 | |
| 4154 chr10 51026732 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4155 chr10 51031398 . TG TGCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4156 chr10 51050166 . CT CTAT 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4157 chr10 51344579 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4158 chr10 51371567 . C T 4.77 . DP=3;AF1=0.5001;CI95=0.5,0.5;DP4=1,0,1,1;MQ=49;PV4=1,0.12,0.33,1 PL:DP:SP:GT:GQ 33,0,30:3:0:0/1:31 | |
| 4159 chr10 51371666 . T C 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4160 chr10 51387799 . C T 7 . DP=4;AF1=0.5025;CI95=0.5,0.5;DP4=0,1,0,3;MQ=49;PV4=1,0.088,1,1 PL:DP:SP:GT:GQ 36,0,20:4:0:0/1:23 | |
| 4161 chr10 51457175 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4162 chr10 51489617 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4163 chr10 51502368 . T A 4.13 . DP=2;AF1=0.5002;CI95=0.5,0.5;DP4=0,1,0,1;MQ=39;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,28:2:0:0/1:30 | |
| 4164 chr10 51524376 . ctt cTTATCTtt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4165 chr10 51529894 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4166 chr10 51532367 . A G 99 . DP=20;AF1=1;CI95=1,1;DP4=0,0,4,10;MQ=29 PL:DP:SP:GT:GQ 164,42,0:14:0:1/1:99 | |
| 4167 chr10 51535927 . g gTT 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 4168 chr10 51549496 . T C 94 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=8,0,11,1;MQ=48;PV4=1,8.6e-08,8.3e-08,1 PL:DP:SP:GT:GQ 124,0,180:20:0:0/1:99 | |
| 4169 chr10 51549545 . G T 68 . DP=31;AF1=1;CI95=1,1;DP4=1,0,14,0;MQ=49;PV4=1,1,0.22,1 PL:DP:SP:GT:GQ 101,28,0:15:0:1/1:99 | |
| 4170 chr10 51549711 . A C 21 . DP=7;AF1=0.5;CI95=0.5,0.5;DP4=1,1,0,4;MQ=49;PV4=0.33,0,0,1 PL:DP:SP:GT:GQ 51,0,82:6:0:0/1:54 | |
| 4171 chr10 51557944 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4172 chr10 51559137 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 4173 chr10 51572166 . CG CGGGAACGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4174 chr10 51575211 . CT CTGAGAGTCTCGCGGGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4175 chr10 51580555 . G T 8.64 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=6,1,4,0;MQ=49;PV4=1,0.092,0.055,0.012 PL:DP:SP:GT:GQ 38,0,136:11:0:0/1:41 | |
| 4176 chr10 51613273 . T TAA 8.19 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 4177 chr10 51617545 . ag aGTTGCTg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4178 chr10 51644682 . a aGGAGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4179 chr10 51653950 . C CGATCCTCGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4180 chr10 51655122 . G A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4181 chr10 51659440 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4182 chr10 51659442 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4183 chr10 51709826 . g gAAAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4184 chr10 51769922 . C T 3.01 . DP=3;AF1=0.4998;CI95=0.5,0.5;DP4=0,2,0,1;MQ=48;PV4=1,1,0,0.25 PL:DP:SP:GT:GQ 30,0,53:3:0:0/1:33 | |
| 4185 chr10 51776118 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4186 chr10 51784084 . c cCGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4187 chr10 51800044 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4188 chr10 51818837 . AG AGTG 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 4189 chr10 51865193 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4190 chr10 52002980 . T G 34.1 . DP=64;AF1=0.5102;CI95=0.5,0.5;DP4=0,1,2,2;MQ=49;PV4=1,0.18,0.25,1 PL:DP:SP:GT:GQ 64,0,14:5:0:0/1:17 | |
| 4191 chr10 52005153 . A G 26 . DP=12;AF1=1;CI95=0.5,1;DP4=0,0,1,2;MQ=49 PL:DP:SP:GT:GQ 58,9,0:3:0:1/1:63 | |
| 4192 chr10 52045941 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4193 chr10 52061769 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4194 chr10 52069808 . ca cATAGa 3.25 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=2,1,0,1;MQ=50;PV4=1,1,1,0.3 PL:DP:SP:GT:GQ 38,0,111:4:0:0/1:41 | |
| 4195 chr10 52070947 . T C 99 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=9,0,8,0;MQ=47;PV4=1,0.00023,2e-19,1 PL:DP:SP:GT:GQ 158,0,204:17:0:0/1:99 | |
| 4196 chr10 52076056 . A ATC 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 4197 chr10 52086939 . C G 61.1 . DP=20;AF1=1;CI95=1,1;DP4=0,0,6,1;MQ=49 PL:DP:SP:GT:GQ 94,21,0:7:0:1/1:84 | |
| 4198 chr10 52108928 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4199 chr10 52120264 . G C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 4200 chr10 52121155 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 4201 chr10 52153870 . g gAGCAAGTTCAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4202 chr10 52160513 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4203 chr10 52161605 . CC CCACAATC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4204 chr10 52163500 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 4205 chr10 52164561 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4206 chr10 52165808 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4207 chr10 52167274 . A G 3.54 . DP=3;AF1=0.4998;CI95=0.5,0.5;DP4=0,2,0,1;MQ=47;PV4=1,0.13,0,1 PL:DP:SP:GT:GQ 31,0,83:3:0:0/1:34 | |
| 4208 chr10 52167294 . g gTA 7.35 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 4209 chr10 52191320 . T C 11.3 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 4210 chr10 52191785 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4211 chr10 52197718 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4212 chr10 52207840 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4213 chr10 52224781 . a aCAT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 4214 chr10 52224934 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4215 chr10 52237726 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4216 chr10 52242352 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4217 chr10 52286759 . A C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4218 chr10 52297084 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4219 chr10 52322109 . TG TGAACTCTCAGAG 9.05 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=49 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 4220 chr10 52340110 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4221 chr10 52351184 . CC CCCCAAGC 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 4222 chr10 52353186 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4223 chr10 52357263 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4224 chr10 52360671 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 4225 chr10 52371073 . GACACAC GACAC 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 4226 chr10 52374289 . T C,G 13.9 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,1,2;MQ=45 PL:DP:SP:GT:GQ 58,19,44,13,0,44:3:0:1/1:49 | |
| 4227 chr10 52390836 . A G 99 . DP=8;AF1=1;CI95=1,1;DP4=0,0,1,7;MQ=46 PL:DP:SP:GT:GQ 150,24,0:8:0:1/1:96 | |
| 4228 chr10 52391676 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4229 chr10 52398470 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4230 chr10 52414978 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4231 chr10 52419433 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 4232 chr10 52422328 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4233 chr10 52435942 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4234 chr10 52439039 . G A 51.5 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,1,3;MQ=46 PL:DP:SP:GT:GQ 84,12,0:4:0:1/1:72 | |
| 4235 chr10 52453345 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4236 chr10 52487467 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4237 chr10 52505072 . GA GAA 3.25 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4238 chr10 52512508 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4239 chr10 52542262 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4240 chr10 52569595 . A C 18.1 . DP=24;AF1=0.5;CI95=0.5,0.5;DP4=2,3,5,0;MQ=49;PV4=0.17,0.0048,0.14,0.45 PL:DP:SP:GT:GQ 48,0,143:10:8:0/1:51 | |
| 4241 chr10 52571047 . C T 8.65 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4242 chr10 52573421 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 4243 chr10 52576068 . G A 77 . DP=34;AF1=0.5;CI95=0.5,0.5;DP4=0,15,1,10;MQ=49;PV4=0.42,4.3e-15,0.01,0.43 PL:DP:SP:GT:GQ 107,0,237:26:0:0/1:99 | |
| 4244 chr10 52576547 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4245 chr10 52628451 . C CTAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4246 chr10 52635009 . CTA C 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 4247 chr10 52639701 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 4248 chr10 52646072 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4249 chr10 52669795 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4250 chr10 52687989 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 4251 chr10 52692181 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4252 chr10 52709403 . AA AAAAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4253 chr10 52712073 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4254 chr10 52716988 . ca cATa 4.91 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=23 PL:DP:SP:GT:GQ 42,6,0:2:0:1/1:49 | |
| 4255 chr10 52730800 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4256 chr10 52745644 . C G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 4257 chr10 52780720 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4258 chr10 52786871 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4259 chr10 52826229 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4260 chr10 52856268 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4261 chr10 52859486 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4262 chr10 52866677 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 4263 chr10 52871195 . A C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 4264 chr10 52872779 . GC GCAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4265 chr10 52875180 . G C 13.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=48 PL:DP:SP:GT:GQ 45,6,0:2:0:1/1:49 | |
| 4266 chr10 52963431 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4267 chr10 52973519 . tg tGGg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4268 chr10 52981286 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4269 chr10 52986772 . T TGTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4270 chr10 52994813 . C T 19.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=46 PL:DP:SP:GT:GQ 51,6,0:2:0:1/1:49 | |
| 4271 chr10 53048004 . GGAG GGAGAG 7.36 . INDEL;DP=2;AF1=0.5016;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,22:2:0:0/1:25 | |
| 4272 chr10 53073006 . T A 3.56 . DP=2;AF1=0.5038;CI95=0.5,0.5;DP4=0,1,1,0;MQ=42;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,18:2:0:0/1:21 | |
| 4273 chr10 53094677 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4274 chr10 53099316 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4275 chr10 53110157 . AA AAGGAGA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4276 chr10 53132332 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4277 chr10 53141918 . TTAAAAT TT 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 4278 chr10 53155278 . CTCTTT CT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4279 chr10 53156315 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4280 chr10 53162009 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4281 chr10 53180647 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4282 chr10 53194987 . G GGTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4283 chr10 53199746 . AAGTA AA 7.35 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 4284 chr10 53230443 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 4285 chr10 53234379 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4286 chr10 53236641 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 4287 chr10 53245584 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 4288 chr10 53250231 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4289 chr10 53274221 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4290 chr10 53276884 . tg tGGGGATCGAg 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4291 chr10 53287610 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4292 chr10 53328511 . ACCCCC ACCC 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 4293 chr10 53329445 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4294 chr10 53333551 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4295 chr10 53334440 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4296 chr10 53363582 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4297 chr10 53380469 . gt gTGCt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4298 chr10 53405143 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4299 chr10 53405199 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4300 chr10 53418681 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4301 chr10 53422876 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 4302 chr10 53434743 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4303 chr10 53440345 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4304 chr10 53457421 . A G 3.54 . DP=18;AF1=0.4998;CI95=0.5,0.5;DP4=5,0,3,0;MQ=50;PV4=1,0.059,0.11,0.15 PL:DP:SP:GT:GQ 31,0,80:8:0:0/1:34 | |
| 4305 chr10 53458047 . A G 99 . DP=38;AF1=0.5;CI95=0.5,0.5;DP4=6,8,9,10;MQ=50;PV4=1,2.2e-09,0.096,0.42 PL:DP:SP:GT:GQ 143,0,255:33:0:0/1:99 | |
| 4306 chr10 53458646 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4307 chr10 53458998 . A G 22.5 . DP=15;AF1=1;CI95=0.5,1;DP4=0,0,1,3;MQ=50 PL:DP:SP:GT:GQ 55,12,0:4:0:1/1:72 | |
| 4308 chr10 53474220 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4309 chr10 53498432 . atctt aTCTTtctt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4310 chr10 53537779 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4311 chr10 53544915 . AG AGGTTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4312 chr10 53575664 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4313 chr10 53595611 . c cGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4314 chr10 53603082 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 4315 chr10 53605082 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4316 chr10 53637169 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4317 chr10 53638204 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4318 chr10 53667492 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4319 chr10 53685192 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4320 chr10 53687579 . A ACAGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4321 chr10 53694460 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4322 chr10 53721974 . T A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 4323 chr10 53722552 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4324 chr10 53725000 . c cCATGTGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4325 chr10 53764547 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4326 chr10 53809763 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4327 chr10 53810789 . c cGGTCCTCCCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4328 chr10 53823438 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4329 chr10 53832422 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4330 chr10 53844547 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4331 chr10 53858096 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 4332 chr10 53872402 . C A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4333 chr10 53875430 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4334 chr10 53879735 . g gGGAC 12.7 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4335 chr10 53902932 . gt gTACACAACTCt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4336 chr10 53914636 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4337 chr10 53916975 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4338 chr10 53928191 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 4339 chr10 53933359 . T A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 4340 chr10 53955006 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4341 chr10 53983258 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4342 chr10 54022492 . G A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4343 chr10 54031957 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4344 chr10 54044933 . C A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 4345 chr10 54045384 . C A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4346 chr10 54046634 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 4347 chr10 54061574 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4348 chr10 54081350 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4349 chr10 54148888 . C A 28 . DP=8;AF1=1;CI95=1,1;DP4=0,0,8,0;MQ=34 PL:DP:SP:GT:GQ 61,24,0:8:0:1/1:96 | |
| 4350 chr10 54172815 . C A 18.1 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=0,3,3,1;MQ=50;PV4=0.14,0.089,0.22,1 PL:DP:SP:GT:GQ 48,0,64:7:8:0/1:51 | |
| 4351 chr10 54174132 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4352 chr10 54189582 . C T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 4353 chr10 54193632 . A T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 4354 chr10 54223001 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4355 chr10 54226840 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4356 chr10 54229898 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4357 chr10 54231897 . AA AAAATCTCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4358 chr10 54236352 . A G 3.41 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=50 PL:DP:SP:GT:GQ 32,6,0:2:0:1/1:49 | |
| 4359 chr10 54264013 . C T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 4360 chr10 54281440 . G A 4.77 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,33:2:0:0/1:33 | |
| 4361 chr10 54300698 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4362 chr10 54318327 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4363 chr10 54328385 . ACC A 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4364 chr10 54337850 . CTTTA CTTTATTTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4365 chr10 54341141 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4366 chr10 54346016 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4367 chr10 54359628 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=46 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4368 chr10 54360086 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4369 chr10 54380207 . c cTGCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4370 chr10 54385324 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4371 chr10 54386885 . TTCA TTCAACTGTCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4372 chr10 54391462 . CTCA C 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 4373 chr10 54400301 . AA AAACA 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 4374 chr10 54411356 . CAAATT C 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4375 chr10 54423606 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4376 chr10 54427269 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4377 chr10 54434212 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 4378 chr10 54434726 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4379 chr10 54442121 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4380 chr10 54451669 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4381 chr10 54503992 . T TTCAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4382 chr10 54507162 . gaccac gac 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4383 chr10 54520034 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4384 chr10 54528266 . G C 99 . DP=19;AF1=1;CI95=1,1;DP4=0,0,1,9;MQ=45 PL:DP:SP:GT:GQ 158,30,0:10:0:1/1:99 | |
| 4385 chr10 54528298 . G C 99 . DP=17;AF1=1;CI95=1,1;DP4=0,0,0,16;MQ=45 PL:DP:SP:GT:GQ 159,48,0:16:0:1/1:99 | |
| 4386 chr10 54528353 . C G 66.1 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,6;MQ=47 PL:DP:SP:GT:GQ 99,18,0:6:0:1/1:90 | |
| 4387 chr10 54565301 . G A 19.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 51,6,0:2:0:1/1:49 | |
| 4388 chr10 54565407 . G T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4389 chr10 54598454 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4390 chr10 54625049 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 4391 chr10 54625084 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4392 chr10 54632943 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4393 chr10 54643069 . at aTGt 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,41:2:0:0/1:42 | |
| 4394 chr10 54653182 . AG AGAAAGGTTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4395 chr10 54672748 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4396 chr10 54674325 . TAAAGA TA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4397 chr10 54676309 . g gTTGCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4398 chr10 54680540 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4399 chr10 54769314 . A AGCCAACTT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 4400 chr10 54771192 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4401 chr10 54785274 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 4402 chr10 54801052 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4403 chr10 54833667 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4404 chr10 54860645 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 4405 chr10 54870590 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4406 chr10 54870630 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4407 chr10 54884089 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4408 chr10 54891489 . AG AGTG 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 4409 chr10 54891890 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 4410 chr10 54896624 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 4411 chr10 54901719 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4412 chr10 54938398 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4413 chr10 54954315 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4414 chr10 54962295 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4415 chr10 54982338 . g gTATTTGCTCCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4416 chr10 54984810 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4417 chr10 55021298 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4418 chr10 55042120 . TT TTGCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4419 chr10 55043538 . C A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 4420 chr10 55071833 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4421 chr10 55074752 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 4422 chr10 55083488 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 4423 chr10 55105822 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 4424 chr10 55120161 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4425 chr10 55120840 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4426 chr10 55164897 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4427 chr10 55191521 . TA TAGTCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4428 chr10 55199097 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4429 chr10 55212917 . GT GTTT 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 4430 chr10 55219535 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4431 chr10 55224763 . CT CTCTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4432 chr10 55235565 . C CGGGGGG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 4433 chr10 55237094 . caaaa caa 54.2 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=50 PL:DP:SP:GT:GQ 93,6,0:2:0:1/1:49 | |
| 4434 chr10 55240971 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4435 chr10 55267214 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4436 chr10 55268475 . t tGCCTTTTCGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4437 chr10 55357257 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4438 chr10 55371456 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4439 chr10 55376495 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4440 chr10 55392882 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4441 chr10 55408126 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4442 chr10 55408754 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4443 chr10 55424251 . A C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 4444 chr10 55431279 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4445 chr10 55460046 . A T 3.64 . DP=2;AF1=0.5205;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,11:2:0:0/1:14 | |
| 4446 chr10 55461038 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4447 chr10 55469440 . g gAGC 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 4448 chr10 55476678 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4449 chr10 55488367 . a aCAT 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 4450 chr10 55493392 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4451 chr10 55494648 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4452 chr10 55520189 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4453 chr10 55529330 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 4454 chr10 55540984 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4455 chr10 55543749 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4456 chr10 55547599 . A T 6.98 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4457 chr10 55568425 . C T 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 4458 chr10 55572696 . C CAATATTTGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4459 chr10 55579303 . T TGGGCAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4460 chr10 55581882 . CGTTGTTG CGTTG 99 . INDEL;DP=51;AF1=0.5;CI95=0.5,0.5;DP4=14,12,8,12;MQ=50;PV4=0.39,0.0083,1,1 PL:DP:SP:GT:GQ 255,0,255:46:4:0/1:99 | |
| 4461 chr10 55582199 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4462 chr10 55594314 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4463 chr10 55600379 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4464 chr10 55637629 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4465 chr10 55643928 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4466 chr10 55651277 . ACTT A 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4467 chr10 55665120 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4468 chr10 55706100 . T A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 4469 chr10 55719652 . C T 55.1 . DP=10;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=49 PL:DP:SP:GT:GQ 88,21,0:7:0:1/1:84 | |
| 4470 chr10 55724431 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 4471 chr10 55749708 . C G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 4472 chr10 55766535 . G GGTCGGC 7.38 . INDEL;DP=2;AF1=0.504;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,18:2:0:0/1:21 | |
| 4473 chr10 55777987 . CAGA CA 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 4474 chr10 55779909 . G C 52 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=5,0,11,0;MQ=49;PV4=1,0.023,0.19,1 PL:DP:SP:GT:GQ 82,0,73:16:0:0/1:75 | |
| 4475 chr10 55782563 . gt gTCt 3.25 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=3,0,1,0;MQ=50;PV4=1,1,1,0.16 PL:DP:SP:GT:GQ 38,0,113:4:0:0/1:41 | |
| 4476 chr10 55811416 . gaaaataaaa gaaaa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4477 chr10 55828990 . G GAGA 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 4478 chr10 55846016 . G T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4479 chr10 55871846 . t tAA 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4480 chr10 55872290 . G T 17.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=46 PL:DP:SP:GT:GQ 49,6,0:2:0:1/1:49 | |
| 4481 chr10 55916819 . T A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 4482 chr10 55923188 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4483 chr10 55937565 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4484 chr10 55941294 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4485 chr10 55943173 . G C 4.13 . DP=15;AF1=0.4998;CI95=0.5,0.5;DP4=4,1,3,0;MQ=49;PV4=1,0.38,1,1 PL:DP:SP:GT:GQ 32,0,69:8:0:0/1:35 | |
| 4486 chr10 55943184 . T C 8.02 . DP=13;AF1=0.5335;CI95=0.5,1;DP4=1,0,4,0;MQ=49;PV4=1,0.068,1,0.079 PL:DP:SP:GT:GQ 37,0,9:5:0:0/1:12 | |
| 4487 chr10 55955610 . C T 6.2 . DP=29;AF1=0.4999;CI95=0.5,0.5;DP4=4,13,3,2;MQ=49;PV4=0.27,3.9e-05,4.7e-07,1 PL:DP:SP:GT:GQ 35,0,255:22:6:0/1:38 | |
| 4488 chr10 56059001 . c cTCTGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4489 chr10 56103316 . C CGACG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4490 chr10 56106268 . T C 6.98 . DP=17;AF1=0.4999;CI95=0.5,0.5;DP4=2,9,0,5;MQ=49;PV4=1,0.0047,0.015,1 PL:DP:SP:GT:GQ 36,0,232:16:0:0/1:39 | |
| 4491 chr10 56106503 . CCAATTTA C 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4492 chr10 56111515 . C CGTCCCGGAGAA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4493 chr10 56128755 . GTTTT GTTTTTT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,40:2:0:0/1:42 | |
| 4494 chr10 56138152 . CT CTGAGTGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4495 chr10 56150180 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4496 chr10 56160898 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4497 chr10 56169722 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4498 chr10 56180808 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4499 chr10 56197356 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4500 chr10 56285531 . G GCTACTATC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4501 chr10 56310904 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 4502 chr10 56331364 . T A 13.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 4503 chr10 56357810 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 4504 chr10 56360213 . T C 4.77 . DP=2;AF1=0.5004;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,27:2:0:0/1:29 | |
| 4505 chr10 56371727 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4506 chr10 56401470 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4507 chr10 56449035 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4508 chr10 56492065 . C G 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 4509 chr10 56516480 . aagagagagagagagagagagaga aAGagagagagagagagagagagaga 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4510 chr10 56543808 . act aCTCct 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4511 chr10 56553270 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4512 chr10 56573973 . C T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4513 chr10 56575712 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4514 chr10 56594934 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4515 chr10 56601776 . A ATT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4516 chr10 56630610 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4517 chr10 56648254 . ta tACTCTAGa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4518 chr10 56667760 . G C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 4519 chr10 56701352 . t tCG 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 4520 chr10 56757444 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4521 chr10 56760609 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4522 chr10 56760830 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4523 chr10 56771752 . AA AACA 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4524 chr10 56804838 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4525 chr10 56809100 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4526 chr10 56887965 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4527 chr10 56889238 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4528 chr10 56909763 . G T 3.03 . DP=2;AF1=0.5037;CI95=0.5,0.5;DP4=1,0,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,18:2:0:0/1:21 | |
| 4529 chr10 56919053 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4530 chr10 56935964 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4531 chr10 56936908 . ag aGTg 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4532 chr10 56953526 . TG TGGGG 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 4533 chr10 56962393 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 4534 chr10 56996751 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4535 chr10 57000465 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4536 chr10 57030893 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4537 chr10 57033683 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4538 chr10 57043170 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4539 chr10 57046709 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4540 chr10 57105852 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4541 chr10 57119894 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4542 chr10 57121932 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4543 chr10 57144425 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=46 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4544 chr10 57157534 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 4545 chr10 57172174 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4546 chr10 57176868 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4547 chr10 57178298 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4548 chr10 57186664 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4549 chr10 57189904 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4550 chr10 57192860 . at aTGt 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 4551 chr10 57205110 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 4552 chr10 57214181 . T TACAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4553 chr10 57217768 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 4554 chr10 57220176 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4555 chr10 57226678 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4556 chr10 57237512 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4557 chr10 57240635 . ccttt c 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 4558 chr10 57249338 . T TAG 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 4559 chr10 57253912 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4560 chr10 57276615 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4561 chr10 57356203 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4562 chr10 57386811 . A C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4563 chr10 57414789 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4564 chr10 57418583 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4565 chr10 57427169 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4566 chr10 57488304 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4567 chr10 57494661 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4568 chr10 57494681 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4569 chr10 57550568 . C A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 4570 chr10 57570619 . G T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 4571 chr10 57579825 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4572 chr10 57585185 . t tAG 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 4573 chr10 57605977 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4574 chr10 57608302 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4575 chr10 57641060 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4576 chr10 57657293 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4577 chr10 57680574 . C G 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4578 chr10 57684458 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 4579 chr10 57692877 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 4580 chr10 57707475 . atctc aTCtctc 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 4581 chr10 57708669 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4582 chr10 57716637 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4583 chr10 57727420 . TG TGTACTCGG 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 4584 chr10 57750190 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=46 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4585 chr10 57752425 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4586 chr10 57755680 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4587 chr10 57756504 . t tGTGGACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4588 chr10 57761255 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 4589 chr10 57809398 . at aTCCCTACt 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 4590 chr10 57811302 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4591 chr10 57815297 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4592 chr10 57817569 . G GC 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 4593 chr10 57863650 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4594 chr10 57876701 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4595 chr10 57896585 . G GTAT 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4596 chr10 57914423 . GAC G 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4597 chr10 57930130 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4598 chr10 57972701 . C T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 4599 chr10 57979282 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4600 chr10 57988606 . CTCTTGTCTT CTCTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4601 chr10 57991575 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4602 chr10 57996521 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4603 chr10 57999803 . CCAC CC 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 4604 chr10 58000182 . T G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 4605 chr10 58008372 . G T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4606 chr10 58023281 . C A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 4607 chr10 58030880 . AGA AGAGGGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4608 chr10 58043151 . TA TAAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4609 chr10 58076252 . c cCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4610 chr10 58077666 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4611 chr10 58086568 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 4612 chr10 58118630 . T C 29.5 . DP=49;AF1=0.8277;CI95=0.5,1;DP4=0,1,1,3;MQ=49;PV4=1,1,0.25,1 PL:DP:SP:GT:GQ 58,0,1:5:0:1/1:5 | |
| 4613 chr10 58119976 . G A 51.3 . DP=18;AF1=1;CI95=0.5,1;DP4=0,0,1,4;MQ=48 PL:DP:SP:GT:GQ 84,15,0:5:0:1/1:75 | |
| 4614 chr10 58120823 . G T 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4615 chr10 58136277 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4616 chr10 58149951 . a aGAGAAGAAAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4617 chr10 58169446 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4618 chr10 58207361 . aaccactac aac 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4619 chr10 58250073 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4620 chr10 58264036 . TG TGG 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4621 chr10 58276248 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4622 chr10 58291971 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4623 chr10 58305650 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4624 chr10 58310732 . G A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4625 chr10 58322826 . ag aGATTGCg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4626 chr10 58330520 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4627 chr10 58343404 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4628 chr10 58346117 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4629 chr10 58349487 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4630 chr10 58360716 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4631 chr10 58363849 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4632 chr10 58366417 . T G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4633 chr10 58383417 . TG TGAAGGGAACAAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4634 chr10 58394646 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4635 chr10 58399627 . Tttattattattattattattat Tttattattattattattat 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4636 chr10 58476392 . catcagg c 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 4637 chr10 58497408 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4638 chr10 58522826 . ggg gGGAGAAgg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4639 chr10 58554732 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 4640 chr10 58557424 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4641 chr10 58560071 . act aCTct 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 4642 chr10 58580636 . a aACTCAGAGAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4643 chr10 58590984 . A G 13.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 4644 chr10 58623936 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4645 chr10 58669627 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4646 chr10 58685786 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4647 chr10 58686260 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4648 chr10 58695543 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4649 chr10 58700513 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4650 chr10 58701751 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4651 chr10 58746251 . GA GATTCCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4652 chr10 58761135 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4653 chr10 58762144 . a aATG 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 4654 chr10 58766808 . TA TACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4655 chr10 58771973 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4656 chr10 58780000 . T G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4657 chr10 58788162 . A C 6.98 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,44:2:0:0/1:38 | |
| 4658 chr10 58801727 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4659 chr10 58829697 . T G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4660 chr10 58842551 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 4661 chr10 58848705 . atggc a 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4662 chr10 58870955 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4663 chr10 58905328 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4664 chr10 58920472 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4665 chr10 58942043 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4666 chr10 58974701 . C T 3.1 . DP=2;AF1=0.5204;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,11:2:0:0/1:14 | |
| 4667 chr10 58989094 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4668 chr10 59006642 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4669 chr10 59014613 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 4670 chr10 59027934 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4671 chr10 59034986 . t tCAGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4672 chr10 59061782 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4673 chr10 59066251 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4674 chr10 59078294 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4675 chr10 59089104 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4676 chr10 59091227 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4677 chr10 59101935 . ca cAGTCTCTGa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4678 chr10 59117515 . a aGG 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 4679 chr10 59122463 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4680 chr10 59125498 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4681 chr10 59136915 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4682 chr10 59232657 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4683 chr10 59242606 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4684 chr10 59266360 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4685 chr10 59280575 . aactgca aa 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 4686 chr10 59285787 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 4687 chr10 59326714 . AC ACTC 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 4688 chr10 59327522 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4689 chr10 59340275 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4690 chr10 59358694 . G T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4691 chr10 59368252 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4692 chr10 59385555 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4693 chr10 59387190 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 4694 chr10 59440749 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4695 chr10 59448287 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4696 chr10 59454405 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4697 chr10 59468814 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4698 chr10 59472142 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4699 chr10 59477274 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4700 chr10 59489594 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4701 chr10 59495230 . A T 9.31 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=42 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 4702 chr10 59500977 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4703 chr10 59512182 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4704 chr10 59529072 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 4705 chr10 59534072 . TAATAAATA TAATA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4706 chr10 59543668 . t tCGTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4707 chr10 59549992 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4708 chr10 59581625 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=46 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4709 chr10 59582240 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4710 chr10 59585105 . g gGACCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4711 chr10 59604809 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4712 chr10 59618988 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 4713 chr10 59636802 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4714 chr10 59665030 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 4715 chr10 59670899 . GG GGAATGACAG 7.69 . INDEL;DP=2;AF1=0.5554;CI95=0.5,1;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,7:2:0:0/1:10 | |
| 4716 chr10 59701026 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 4717 chr10 59706445 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4718 chr10 59713442 . TCAA T 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4719 chr10 59714681 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 4720 chr10 59715713 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 4721 chr10 59722503 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4722 chr10 59727850 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 4723 chr10 59728359 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4724 chr10 59729229 . tt tTGt 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4725 chr10 59730485 . A C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 4726 chr10 59732768 . C CACCA 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=49 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4727 chr10 59747401 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 4728 chr10 59753941 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4729 chr10 59812071 . T TC 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4730 chr10 59823926 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 4731 chr10 59826898 . C T 3.54 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,31:2:0:0/1:31 | |
| 4732 chr10 59846351 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 4733 chr10 59846508 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4734 chr10 59858609 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 4735 chr10 59875843 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4736 chr10 59883244 . G T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4737 chr10 59886713 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4738 chr10 59887991 . AATG A 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 4739 chr10 59939033 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4740 chr10 59941154 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4741 chr10 59944909 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 4742 chr10 59945676 . TA TACAGTTGTGGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4743 chr10 59955929 . C CTT 5.08 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=0,2,1,0;MQ=50;PV4=0.33,1,1,0.26 PL:DP:SP:GT:GQ 41,0,74:3:0:0/1:44 | |
| 4744 chr10 59958956 . C A 3.02 . DP=4;AF1=0.5002;CI95=0.5,0.5;DP4=1,0,2,0;MQ=50;PV4=1,0.037,0.33,1 PL:DP:SP:GT:GQ 30,0,27:3:0:0/1:28 | |
| 4745 chr10 59981076 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4746 chr10 59986854 . T TCNNNNNN 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4747 chr10 59998596 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4748 chr10 60015977 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4749 chr10 60053167 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4750 chr10 60079802 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4751 chr10 60096370 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4752 chr10 60102325 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4753 chr10 60106986 . ATCT ATCTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4754 chr10 60137582 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4755 chr10 60138441 . tg tGATTTGg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4756 chr10 60141753 . G T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4757 chr10 60146071 . C G 5.46 . DP=5;AF1=0.4999;CI95=0.5,0.5;DP4=0,2,0,2;MQ=49;PV4=1,0.42,0.12,1 PL:DP:SP:GT:GQ 34,0,38:4:0:0/1:36 | |
| 4758 chr10 60151826 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4759 chr10 60154185 . C T 61 . DP=26;AF1=0.5;CI95=0.5,0.5;DP4=2,13,2,5;MQ=49;PV4=0.56,1.2e-07,9.9e-09,1 PL:DP:SP:GT:GQ 91,0,255:22:2:0/1:94 | |
| 4760 chr10 60165041 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4761 chr10 60170030 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4762 chr10 60179967 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 4763 chr10 60221741 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 4764 chr10 60236267 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 4765 chr10 60242641 . A C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4766 chr10 60279830 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 4767 chr10 60293463 . a aGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4768 chr10 60295387 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4769 chr10 60298388 . G T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4770 chr10 60306089 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4771 chr10 60314930 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4772 chr10 60360711 . tgta t 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4773 chr10 60380717 . C G 99 . DP=28;AF1=0.5;CI95=0.5,0.5;DP4=0,12,0,13;MQ=48;PV4=1,0.011,0.0011,1 PL:DP:SP:GT:GQ 129,0,189:25:0:0/1:99 | |
| 4774 chr10 60389886 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4775 chr10 60397486 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4776 chr10 60402272 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 4777 chr10 60407848 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 4778 chr10 60411067 . C G 4.26 . DP=2;AF1=0.5262;CI95=0.5,1;DP4=1,0,0,1;MQ=42;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,10:2:0:0/1:13 | |
| 4779 chr10 60411087 . T G 12.3 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 4780 chr10 60417785 . gt gTGTt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4781 chr10 60431062 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4782 chr10 60469056 . A C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 4783 chr10 60469553 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4784 chr10 60485165 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4785 chr10 60487330 . G T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4786 chr10 60487791 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4787 chr10 60490114 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4788 chr10 60490119 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4789 chr10 60493137 . A ACGTG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4790 chr10 60495373 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4791 chr10 60546652 . CA C 19.5 . INDEL;DP=9;AF1=0.5;CI95=0.5,0.5;DP4=5,1,3,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 57,0,112:9:0:0/1:60 | |
| 4792 chr10 60562944 . C T 3.54 . DP=17;AF1=0.4998;CI95=0.5,0.5;DP4=3,3,0,3;MQ=49;PV4=0.46,0.23,0.04,1 PL:DP:SP:GT:GQ 31,0,120:9:3:0/1:34 | |
| 4793 chr10 60569419 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4794 chr10 60571967 . a aG 3.81 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4795 chr10 60573753 . G T 15.3 . DP=34;AF1=0.5207;CI95=0.5,1;DP4=0,1,0,6;MQ=50;PV4=1,4.1e-06,1,1 PL:DP:SP:GT:GQ 45,0,11:7:0:0/1:14 | |
| 4796 chr10 60577393 . T C 52.3 . DP=32;AF1=1;CI95=0.5,1;DP4=0,0,3,2;MQ=49 PL:DP:SP:GT:GQ 85,15,0:5:0:1/1:75 | |
| 4797 chr10 60593787 . T C 5.46 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,44:2:0:0/1:37 | |
| 4798 chr10 60606072 . tcaa t 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 4799 chr10 60608031 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 4800 chr10 60659273 . AC ACTTGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4801 chr10 60664085 . a aAGGCGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4802 chr10 60686449 . tca t 5.8 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 4803 chr10 60702144 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4804 chr10 60710667 . A AGATG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4805 chr10 60714553 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4806 chr10 60724965 . T A 10.4 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 4807 chr10 60734958 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4808 chr10 60735725 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4809 chr10 60765043 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4810 chr10 60783237 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4811 chr10 60791390 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4812 chr10 60793432 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4813 chr10 60820987 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4814 chr10 60884320 . T G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 4815 chr10 60895303 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4816 chr10 60901525 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4817 chr10 60916480 . T G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 4818 chr10 60919563 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4819 chr10 60927284 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4820 chr10 60996453 . G A 37.1 . DP=15;AF1=1;CI95=0.5,1;DP4=0,1,0,6;MQ=49;PV4=1,1,0.47,1 PL:DP:SP:GT:GQ 68,5,0:7:0:1/1:46 | |
| 4821 chr10 61002721 . C G 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 4822 chr10 61005244 . G C 99 . DP=28;AF1=1;CI95=1,1;DP4=0,0,3,16;MQ=48 PL:DP:SP:GT:GQ 181,57,0:19:0:1/1:99 | |
| 4823 chr10 61010567 . TA TACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4824 chr10 61014078 . A C 5.46 . DP=28;AF1=0.4999;CI95=0.5,0.5;DP4=14,0,4,0;MQ=49;PV4=1,0.021,9.8e-06,1 PL:DP:SP:GT:GQ 34,0,213:18:0:0/1:37 | |
| 4825 chr10 61014174 . C G 5.46 . DP=23;AF1=0.4999;CI95=0.5,0.5;DP4=0,6,0,4;MQ=47;PV4=1,0.078,0.00059,1 PL:DP:SP:GT:GQ 34,0,117:10:0:0/1:37 | |
| 4826 chr10 61022481 . CC CCAC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 4827 chr10 61069052 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 4828 chr10 61083688 . ACA ACAACCA 16.6 . INDEL;DP=24;AF1=0.5;CI95=0.5,0.5;DP4=2,0,2,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 54,0,53:4:0:0/1:53 | |
| 4829 chr10 61083689 . CAG CAGTTAG 38.5 . INDEL;DP=24;AF1=0.5064;CI95=0.5,0.5;DP4=2,0,17,0;MQ=50;PV4=1,0.00017,1,1 PL:DP:SP:GT:GQ 76,0,16:19:0:0/1:19 | |
| 4830 chr10 61083690 . AG AGTTGG 99 . INDEL;DP=25;AF1=0.505;CI95=0.5,0.5;DP4=2,0,19,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 228,0,17:21:0:0/1:20 | |
| 4831 chr10 61088045 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4832 chr10 61090513 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4833 chr10 61099333 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4834 chr10 61110473 . GA GACTAAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4835 chr10 61111288 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4836 chr10 61115909 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4837 chr10 61122268 . T TTA 99 . INDEL;DP=10;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=50 PL:DP:SP:GT:GQ 176,15,0:5:0:1/1:75 | |
| 4838 chr10 61125141 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 4839 chr10 61162357 . t tCTGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4840 chr10 61167078 . aa aACCAGGa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4841 chr10 61173164 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4842 chr10 61208403 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4843 chr10 61224909 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4844 chr10 61237122 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4845 chr10 61276156 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4846 chr10 61296601 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4847 chr10 61311183 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4848 chr10 61311416 . TAAA TAA 93.6 . INDEL;DP=8;AF1=1;CI95=0.5,1;DP4=0,0,5,1;MQ=50 PL:DP:SP:GT:GQ 134,18,0:6:0:1/1:90 | |
| 4849 chr10 61331375 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4850 chr10 61346112 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 4851 chr10 61361899 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 4852 chr10 61368566 . tc tCGc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4853 chr10 61368795 . tacacacacacacacacacacacacac tacacacacacacacacacacac 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4854 chr10 61413321 . T C 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,41:2:0:0/1:34 | |
| 4855 chr10 61429883 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4856 chr10 61431977 . G GC 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 4857 chr10 61432625 . G C 4.77 . DP=22;AF1=0.4999;CI95=0.5,0.5;DP4=11,4,0,4;MQ=49;PV4=0.018,0.025,0.00099,0.092 PL:DP:SP:GT:GQ 33,0,255:19:17:0/1:36 | |
| 4858 chr10 61443808 . A G 7.8 . DP=26;AF1=0.5;CI95=0.5,0.5;DP4=6,0,4,0;MQ=49;PV4=1,0.0055,0.05,1 PL:DP:SP:GT:GQ 37,0,154:10:0:0/1:40 | |
| 4859 chr10 61470256 . C T 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 4860 chr10 61496726 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 4861 chr10 61507552 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4862 chr10 61512514 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 4863 chr10 61528266 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4864 chr10 61539760 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4865 chr10 61550300 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4866 chr10 61552878 . G T 3.01 . DP=13;AF1=0.4998;CI95=0.5,0.5;DP4=1,1,0,2;MQ=48;PV4=1,0.16,0.38,1 PL:DP:SP:GT:GQ 30,0,57:4:0:0/1:33 | |
| 4867 chr10 61552936 . CTGACTTG CTG 7.35 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 4868 chr10 61557410 . G C 3.02 . DP=3;AF1=0.5002;CI95=0.5,0.5;DP4=1,0,0,1;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,27:2:0:0/1:28 | |
| 4869 chr10 61592547 . A G 6.79 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 37,6,0:2:0:1/1:49 | |
| 4870 chr10 61596795 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4871 chr10 61597583 . ATCT ATCTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4872 chr10 61613525 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4873 chr10 61629177 . a aGCAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4874 chr10 61639316 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4875 chr10 61655246 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4876 chr10 61656406 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4877 chr10 61667831 . gcc gCCcc 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4878 chr10 61668169 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4879 chr10 61669811 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 4880 chr10 61672673 . a aTGTGAGT 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 4881 chr10 61675471 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4882 chr10 61693239 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4883 chr10 61698692 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 4884 chr10 61702582 . A T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 4885 chr10 61727989 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4886 chr10 61742542 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 4887 chr10 61743352 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4888 chr10 61753437 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4889 chr10 61760704 . A G 17.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=48 PL:DP:SP:GT:GQ 49,6,0:2:0:1/1:49 | |
| 4890 chr10 61777943 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4891 chr10 61801623 . C T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 4892 chr10 61802550 . A T 99 . DP=27;AF1=1;CI95=1,1;DP4=0,0,0,22;MQ=46 PL:DP:SP:GT:GQ 165,66,0:22:0:1/1:99 | |
| 4893 chr10 61802561 . G T 70 . DP=21;AF1=1;CI95=1,1;DP4=0,0,0,13;MQ=45 PL:DP:SP:GT:GQ 103,39,0:13:0:1/1:99 | |
| 4894 chr10 61802577 . TCC TCCC 77.7 . INDEL;DP=19;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=50 PL:DP:SP:GT:GQ 118,15,0:5:0:1/1:75 | |
| 4895 chr10 61803351 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4896 chr10 61815335 . C A 50.1 . DP=27;AF1=1;CI95=0.5,1;DP4=0,0,6,0;MQ=48 PL:DP:SP:GT:GQ 83,18,0:6:0:1/1:90 | |
| 4897 chr10 61819049 . T G 99 . DP=31;AF1=1;CI95=1,1;DP4=0,0,28,0;MQ=46 PL:DP:SP:GT:GQ 176,84,0:28:0:1/1:99 | |
| 4898 chr10 61823312 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4899 chr10 61824985 . TGC TGCTGAGGGC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 4900 chr10 61826305 . GAGCA GAGCAAGCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4901 chr10 61829545 . A C 6.2 . DP=30;AF1=0.4999;CI95=0.5,0.5;DP4=8,3,0,5;MQ=50;PV4=0.026,0.00017,0.26,0.31 PL:DP:SP:GT:GQ 35,0,255:16:16:0/1:38 | |
| 4902 chr10 61839059 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4903 chr10 61843148 . C T 40 . DP=3;AF1=0.5;CI95=0.5,0.5;DP4=1,0,2,0;MQ=45;PV4=1,0.11,0,1 PL:DP:SP:GT:GQ 70,0,41:3:0:0/1:44 | |
| 4904 chr10 61846622 . T C 4.77 . DP=18;AF1=0.4999;CI95=0.5,0.5;DP4=1,4,0,3;MQ=48;PV4=1,0.16,0.11,1 PL:DP:SP:GT:GQ 33,0,112:8:0:0/1:36 | |
| 4905 chr10 61863146 . T TATC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4906 chr10 61865615 . A G 14.2 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=6,1,5,0;MQ=49;PV4=1,0.3,0.002,1 PL:DP:SP:GT:GQ 44,0,111:12:0:0/1:47 | |
| 4907 chr10 61870619 . a aTAAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4908 chr10 61885319 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4909 chr10 61889739 . A AGTCTGTG 3.25 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=49 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4910 chr10 61896846 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4911 chr10 61898077 . A AGAGTATT 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4912 chr10 61909953 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4913 chr10 61910433 . a aTT 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4914 chr10 61926589 . A G 99 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=10,0,6,1;MQ=48;PV4=0.41,0.0045,1.1e-08,1 PL:DP:SP:GT:GQ 138,0,207:17:0:0/1:99 | |
| 4915 chr10 61932587 . C T 18.1 . DP=4;AF1=0.5;CI95=0.5,0.5;DP4=1,0,2,0;MQ=46;PV4=1,0.059,0.14,1 PL:DP:SP:GT:GQ 48,0,41:3:0:0/1:43 | |
| 4916 chr10 61932897 . C G 12.3 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=3,5,0,4;MQ=47;PV4=0.49,0.033,0.014,1 PL:DP:SP:GT:GQ 42,0,206:12:3:0/1:45 | |
| 4917 chr10 61932902 . T C 3.54 . DP=20;AF1=0.4998;CI95=0.5,0.5;DP4=2,8,0,3;MQ=48;PV4=1,0.012,3.8e-05,0.13 PL:DP:SP:GT:GQ 31,0,255:13:0:0/1:34 | |
| 4918 chr10 61939701 . C G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 4919 chr10 61940395 . A ACCTGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4920 chr10 61956773 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4921 chr10 61992128 . T TAC 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 4922 chr10 61998916 . ta tAGa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4923 chr10 62057598 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4924 chr10 62094202 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 4925 chr10 62108839 . CAGAGAG CAGAG 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 4926 chr10 62118586 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4927 chr10 62158296 . AA AACAAAGTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4928 chr10 62163372 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4929 chr10 62189405 . g gGAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4930 chr10 62191756 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4931 chr10 62240926 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4932 chr10 62250629 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 4933 chr10 62279418 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4934 chr10 62295499 . tt tTAAGTGt 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4935 chr10 62299553 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 4936 chr10 62316622 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4937 chr10 62340687 . AT ATATGCCCTCT 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4938 chr10 62340927 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4939 chr10 62343910 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 4940 chr10 62359792 . a aT 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 4941 chr10 62363128 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4942 chr10 62377251 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 4943 chr10 62380548 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4944 chr10 62391714 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4945 chr10 62404296 . TTG T 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4946 chr10 62444965 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 4947 chr10 62447979 . ac aCCACc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4948 chr10 62487584 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 4949 chr10 62491940 . A ACCTTCGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4950 chr10 62495842 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 4951 chr10 62496927 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4952 chr10 62497374 . C T 18.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=46 PL:DP:SP:GT:GQ 50,6,0:2:0:1/1:49 | |
| 4953 chr10 62506788 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4954 chr10 62513174 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 4955 chr10 62529106 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 4956 chr10 62551815 . GC G 65.5 . INDEL;DP=23;AF1=0.5;CI95=0.5,0.5;DP4=5,7,0,8;MQ=50;PV4=0.055,0.041,1,0.42 PL:DP:SP:GT:GQ 103,0,248:20:13:0/1:99 | |
| 4957 chr10 62553763 . A G 42.1 . DP=9;AF1=0.5163;CI95=0.5,1;DP4=0,1,0,6;MQ=47;PV4=1,0.1,1,1 PL:DP:SP:GT:GQ 72,0,12:7:0:0/1:15 | |
| 4958 chr10 62556358 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 4959 chr10 62587260 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4960 chr10 62593991 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4961 chr10 62604847 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 4962 chr10 62610183 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4963 chr10 62615321 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 4964 chr10 62635377 . A AAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4965 chr10 62644153 . C G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 4966 chr10 62644652 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=46 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4967 chr10 62646214 . T TTCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4968 chr10 62658158 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4969 chr10 62660240 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4970 chr10 62678901 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4971 chr10 62719814 . A ATTCTGCAC 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4972 chr10 62787217 . GT GTAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4973 chr10 62788795 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 4974 chr10 62794272 . C T 10.4 . DP=5;AF1=0.5;CI95=0.5,0.5;DP4=3,0,2,0;MQ=38;PV4=1,0.24,0.3,0.24 PL:DP:SP:GT:GQ 40,0,87:5:0:0/1:43 | |
| 4975 chr10 62795684 . ttttccttactt ttt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4976 chr10 62798999 . tgg tGGTCCgg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4977 chr10 62808066 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4978 chr10 62824837 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4979 chr10 62831754 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4980 chr10 62836937 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4981 chr10 62844321 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4982 chr10 62874466 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4983 chr10 62905482 . ac aCCTCACCCCc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4984 chr10 62913533 . T TGCAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 4985 chr10 62923360 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4986 chr10 62928210 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 4987 chr10 62952860 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4988 chr10 62965579 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4989 chr10 62965603 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4990 chr10 62966606 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4991 chr10 62980532 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4992 chr10 62995084 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 4993 chr10 63026574 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 4994 chr10 63039156 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 4995 chr10 63041068 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 4996 chr10 63042997 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4997 chr10 63049686 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 4998 chr10 63060114 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 4999 chr10 63082132 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5000 chr10 63090187 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5001 chr10 63120542 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5002 chr10 63137933 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 5003 chr10 63149420 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 5004 chr10 63161011 . cgatcaaga cGATCAAGAgatcaaga 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5005 chr10 63165698 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5006 chr10 63189923 . gaaaaa gaaa 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 5007 chr10 63199623 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5008 chr10 63219260 . G C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 5009 chr10 63222115 . GA GACGCTA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 5010 chr10 63229061 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5011 chr10 63249603 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5012 chr10 63253129 . aa aAGa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5013 chr10 63276880 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5014 chr10 63283035 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5015 chr10 63286315 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5016 chr10 63292333 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5017 chr10 63301679 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5018 chr10 63323050 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 5019 chr10 63368199 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5020 chr10 63395710 . C A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 5021 chr10 63424476 . TTTA T 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5022 chr10 63434048 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 5023 chr10 63478873 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5024 chr10 63487383 . G GTA 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 5025 chr10 63571305 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=46 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5026 chr10 63575591 . gcata g 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5027 chr10 63577766 . T A 3.02 . DP=2;AF1=0.5001;CI95=0.5,0.5;DP4=0,1,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,28:2:0:0/1:29 | |
| 5028 chr10 63584310 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 5029 chr10 63604437 . GCA G 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 5030 chr10 63605535 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5031 chr10 63607667 . C A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 5032 chr10 63611233 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 5033 chr10 63617893 . ccat c 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5034 chr10 63624840 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 5035 chr10 63664353 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5036 chr10 63666691 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5037 chr10 63687471 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5038 chr10 63695170 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 5039 chr10 63718300 . TTGGT TT 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 5040 chr10 63751929 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5041 chr10 63780853 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 5042 chr10 63792506 . T G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 5043 chr10 63808386 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5044 chr10 63812575 . AGAGATGGA AGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5045 chr10 63852509 . C T 17.1 . DP=40;AF1=0.5;CI95=0.5,0.5;DP4=16,1,7,0;MQ=49;PV4=1,1.1e-06,0.00028,0.18 PL:DP:SP:GT:GQ 47,0,255:24:0:0/1:50 | |
| 5046 chr10 63854464 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5047 chr10 63855172 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 5048 chr10 63884130 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5049 chr10 63910492 . t tGAAGA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5050 chr10 63946866 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5051 chr10 63964884 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 5052 chr10 63976912 . TAGCTTCA TA 99 . INDEL;DP=26;AF1=0.5;CI95=0.5,0.5;DP4=3,15,4,2;MQ=50;PV4=0.038,0.037,0.041,1 PL:DP:SP:GT:GQ 157,0,255:24:14:0/1:99 | |
| 5053 chr10 63981422 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5054 chr10 63983168 . a aTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5055 chr10 63985965 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 5056 chr10 63987472 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 5057 chr10 63995983 . C T 60.1 . DP=9;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=48 PL:DP:SP:GT:GQ 93,21,0:7:0:1/1:84 | |
| 5058 chr10 64000878 . T G 11.1 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 42,6,0:2:0:1/1:49 | |
| 5059 chr10 64005356 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 5060 chr10 64005711 . C T 15.9 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 47,6,0:2:0:1/1:49 | |
| 5061 chr10 64032310 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5062 chr10 64033088 . ctt ct 18.3 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=50 PL:DP:SP:GT:GQ 57,6,0:2:0:1/1:49 | |
| 5063 chr10 64033290 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5064 chr10 64058629 . T TGG 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 5065 chr10 64063627 . a aGTG 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 5066 chr10 64077819 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 5067 chr10 64078367 . AATACAT AAT 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 5068 chr10 64085742 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5069 chr10 64105853 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5070 chr10 64110075 . a aGC 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 5071 chr10 64119449 . c cCCCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5072 chr10 64133602 . T C 6.2 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,44:2:0:0/1:37 | |
| 5073 chr10 64134961 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5074 chr10 64136710 . CAG C 99 . INDEL;DP=23;AF1=0.5;CI95=0.5,0.5;DP4=0,7,1,10;MQ=50;PV4=1,1,1,0.33 PL:DP:SP:GT:GQ 210,0,115:18:0:0/1:99 | |
| 5075 chr10 64136751 . G C 11.3 . DP=13;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=50 PL:DP:SP:GT:GQ 43,9,0:3:0:1/1:63 | |
| 5076 chr10 64136875 . C T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 5077 chr10 64141059 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5078 chr10 64143709 . GA GATTCAGCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5079 chr10 64145532 . a aTT 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 5080 chr10 64148360 . G T 14.2 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=0,6,0,4;MQ=49;PV4=1,1.4e-06,0.0026,1 PL:DP:SP:GT:GQ 44,0,174:10:0:0/1:47 | |
| 5081 chr10 64150209 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5082 chr10 64159231 . A G 8.44 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=45 PL:DP:SP:GT:GQ 39,6,0:2:0:1/1:49 | |
| 5083 chr10 64163886 . GAA GAAAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5084 chr10 64190840 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5085 chr10 64217729 . A ACTACAT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 5086 chr10 64231762 . A AACTTTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5087 chr10 64253131 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 5088 chr10 64297969 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5089 chr10 64324524 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5090 chr10 64327135 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5091 chr10 64351362 . C G 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5092 chr10 64374450 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5093 chr10 64377861 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5094 chr10 64415184 . A G 99 . DP=35;AF1=1;CI95=1,1;DP4=0,0,27,6;MQ=48 PL:DP:SP:GT:GQ 212,99,0:33:0:1/1:99 | |
| 5095 chr10 64425878 . T A 5.46 . DP=10;AF1=0.4999;CI95=0.5,0.5;DP4=3,0,3,0;MQ=50;PV4=1,0.21,0.19,1 PL:DP:SP:GT:GQ 34,0,49:6:0:0/1:37 | |
| 5096 chr10 64443282 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 5097 chr10 64458178 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5098 chr10 64508220 . A ATTGATC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5099 chr10 64527560 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5100 chr10 64529629 . C CAGTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5101 chr10 64554142 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5102 chr10 64565220 . A T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 5103 chr10 64573771 . C T 99 . DP=24;AF1=1;CI95=1,1;DP4=0,1,1,18;MQ=44;PV4=1,1,4.7e-11,1 PL:DP:SP:GT:GQ 245,28,0:20:0:1/1:99 | |
| 5104 chr10 64599334 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5105 chr10 64621913 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 5106 chr10 64645944 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 5107 chr10 64662161 . c cACCTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5108 chr10 64680722 . C A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 5109 chr10 64744213 . C T 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5110 chr10 64746577 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5111 chr10 64768002 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5112 chr10 64768004 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5113 chr10 64770320 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5114 chr10 64788146 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5115 chr10 64823309 . G A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 5116 chr10 64832252 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 5117 chr10 64832999 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 5118 chr10 64840050 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5119 chr10 64850623 . T TTGCAACG 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,2,1,0;MQ=50;PV4=0.33,0.042,1,0.15 PL:DP:SP:GT:GQ 41,0,83:3:0:0/1:44 | |
| 5120 chr10 64860587 . A T 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,1;MQ=43;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,38:2:0:0/1:32 | |
| 5121 chr10 64900277 . C G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 5122 chr10 64904899 . C G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 5123 chr10 64907151 . C A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 5124 chr10 64910012 . G A 54.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=43 PL:DP:SP:GT:GQ 86,6,0:2:0:1/1:49 | |
| 5125 chr10 64913422 . AACC AACACC 5.08 . INDEL;DP=7;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,1,1,0.28 PL:DP:SP:GT:GQ 41,0,63:3:0:0/1:44 | |
| 5126 chr10 64927891 . T C 51.4 . DP=16;AF1=0.5554;CI95=0.5,1;DP4=0,1,0,7;MQ=45;PV4=1,0.042,0.22,0.16 PL:DP:SP:GT:GQ 81,0,7:8:0:0/1:10 | |
| 5127 chr10 64938369 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 5128 chr10 64967445 . A T 99 . DP=55;AF1=1;CI95=1,1;DP4=0,0,24,22;MQ=49 PL:DP:SP:GT:GQ 255,138,0:46:0:1/1:99 | |
| 5129 chr10 64973338 . A C 17.1 . DP=30;AF1=0.5;CI95=0.5,0.5;DP4=0,13,6,0;MQ=49;PV4=3.7e-05,0.024,0.1,1 PL:DP:SP:GT:GQ 47,0,163:19:44:0/1:50 | |
| 5130 chr10 64975376 . A G 99 . DP=15;AF1=1;CI95=1,1;DP4=0,1,2,11;MQ=48;PV4=1,1,0.11,1 PL:DP:SP:GT:GQ 140,27,0:14:0:1/1:99 | |
| 5131 chr10 64982339 . C T 6.28 . DP=2;AF1=0.5128;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,13:2:0:0/1:16 | |
| 5132 chr10 64982717 . A C 12.3 . DP=7;AF1=0.5;CI95=0.5,0.5;DP4=2,1,0,4;MQ=50;PV4=0.14,0.00039,1,1 PL:DP:SP:GT:GQ 42,0,116:7:8:0/1:45 | |
| 5133 chr10 64984960 . T G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 5134 chr10 64994848 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 5135 chr10 65006973 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 5136 chr10 65007866 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5137 chr10 65013991 . T G 4.77 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 5138 chr10 65014192 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5139 chr10 65044672 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 5140 chr10 65059683 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5141 chr10 65064447 . GAAAA GAA 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 5142 chr10 65087051 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 5143 chr10 65094834 . C A 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5144 chr10 65106457 . gct g 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 5145 chr10 65129282 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 5146 chr10 65142306 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5147 chr10 65181158 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5148 chr10 65188240 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 5149 chr10 65192328 . G C 28.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=45 PL:DP:SP:GT:GQ 60,6,0:2:0:1/1:49 | |
| 5150 chr10 65243894 . G A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 5151 chr10 65248585 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5152 chr10 65248590 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5153 chr10 65260782 . cc cCTGGGGCAATTTGATTc 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=48 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 5154 chr10 65284125 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5155 chr10 65312226 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 5156 chr10 65367478 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5157 chr10 65367589 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5158 chr10 65420935 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5159 chr10 65422860 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5160 chr10 65429014 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 5161 chr10 65454265 . A T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 5162 chr10 65461739 . A AGTCCCT 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 5163 chr10 65472603 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 5164 chr10 65476528 . TCAG T 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 5165 chr10 65499531 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5166 chr10 65500834 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5167 chr10 65500839 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5168 chr10 65520229 . TCA TCATGACTGCACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5169 chr10 65525473 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5170 chr10 65527708 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5171 chr10 65561145 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5172 chr10 65601168 . A T 44 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,1,2;MQ=47 PL:DP:SP:GT:GQ 76,9,0:3:0:1/1:63 | |
| 5173 chr10 65601871 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5174 chr10 65607707 . G A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 5175 chr10 65633773 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 5176 chr10 65660926 . C T 18.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=46 PL:DP:SP:GT:GQ 50,6,0:2:0:1/1:49 | |
| 5177 chr10 65660982 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 5178 chr10 65662003 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5179 chr10 65695506 . GGTGT GGT 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 5180 chr10 65697636 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 5181 chr10 65714628 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5182 chr10 65718264 . T TCTTAGATGCACAGG 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=48 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 5183 chr10 65734646 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5184 chr10 65745749 . aa aACa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5185 chr10 65751097 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5186 chr10 65756881 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5187 chr10 65758365 . G A 6.2 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,44:2:0:0/1:37 | |
| 5188 chr10 65784088 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 5189 chr10 65792885 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 5190 chr10 65813397 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 5191 chr10 65823734 . C CGG 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 5192 chr10 65842310 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 5193 chr10 65856587 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5194 chr10 65863370 . A AGAAAG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 5195 chr10 65870940 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5196 chr10 65873840 . AAT A 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 5197 chr10 65875536 . cattta ca 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 5198 chr10 65904361 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 5199 chr10 65913667 . a aGGGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5200 chr10 65928997 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5201 chr10 65930569 . G GCGAGTCA 3.25 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=1,2,1,0;MQ=50;PV4=1,1,1,0.47 PL:DP:SP:GT:GQ 38,0,130:4:0:0/1:41 | |
| 5202 chr10 65932757 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5203 chr10 65946088 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5204 chr10 65952586 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5205 chr10 65959346 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 5206 chr10 65971485 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 5207 chr10 65983511 . T C 14.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=48 PL:DP:SP:GT:GQ 46,6,0:2:0:1/1:49 | |
| 5208 chr10 65993859 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5209 chr10 65994211 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5210 chr10 65995080 . G C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 5211 chr10 66020679 . atg aTGGTtg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5212 chr10 66047190 . tc tCCCc 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 5213 chr10 66089972 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5214 chr10 66097291 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5215 chr10 66099425 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5216 chr10 66123895 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5217 chr10 66129593 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5218 chr10 66142107 . AA AATA 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 5219 chr10 66150860 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5220 chr10 66163973 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 5221 chr10 66174151 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 5222 chr10 66191404 . ggtg gg 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 5223 chr10 66193216 . G C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 5224 chr10 66209477 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 5225 chr10 66252852 . ca cACATa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5226 chr10 66263919 . GCTA G 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5227 chr10 66271354 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5228 chr10 66278777 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5229 chr10 66295645 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5230 chr10 66298066 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 5231 chr10 66298612 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 5232 chr10 66308777 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 5233 chr10 66312054 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5234 chr10 66387098 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5235 chr10 66449875 . AACACA AACA 39.5 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,2;MQ=50;PV4=1,0,1,0.41 PL:DP:SP:GT:GQ 77,0,41:3:0:0/1:44 | |
| 5236 chr10 66450815 . AA AACGTCCGCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5237 chr10 66471834 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5238 chr10 66499606 . T C 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,41:2:0:0/1:39 | |
| 5239 chr10 66541695 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5240 chr10 66542087 . G C 17.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=42 PL:DP:SP:GT:GQ 49,6,0:2:0:1/1:49 | |
| 5241 chr10 66544471 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5242 chr10 66584258 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5243 chr10 66588743 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 5244 chr10 66589974 . G C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 5245 chr10 66607991 . A AGTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5246 chr10 66646808 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5247 chr10 66659881 . CTGTTTGTT CTGTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5248 chr10 66673449 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5249 chr10 66674471 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5250 chr10 66679207 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5251 chr10 66684032 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5252 chr10 66691508 . C CGGTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5253 chr10 66698381 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5254 chr10 66705754 . TA TATCGCTACA 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=46 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 5255 chr10 66724421 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5256 chr10 66730237 . C T 23.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=45 PL:DP:SP:GT:GQ 55,6,0:2:0:1/1:49 | |
| 5257 chr10 66733892 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5258 chr10 66741594 . T TCCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5259 chr10 66756922 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 5260 chr10 66758130 . G T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5261 chr10 66764437 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 5262 chr10 66773894 . c cT 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 5263 chr10 66870071 . g gTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5264 chr10 66878997 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 5265 chr10 66925353 . C G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 5266 chr10 66956679 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5267 chr10 66995023 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5268 chr10 67008431 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 5269 chr10 67013290 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 5270 chr10 67016399 . T G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 5271 chr10 67021548 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5272 chr10 67033135 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5273 chr10 67041776 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5274 chr10 67071203 . A AGTCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5275 chr10 67090825 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5276 chr10 67107961 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5277 chr10 67118265 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 5278 chr10 67119352 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5279 chr10 67141082 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5280 chr10 67168626 . t tGA 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 5281 chr10 67178934 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5282 chr10 67201208 . a aT 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 5283 chr10 67210053 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5284 chr10 67227846 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 5285 chr10 67255827 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 5286 chr10 67339047 . TA TATGGCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5287 chr10 67345613 . T C 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 5288 chr10 67367170 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5289 chr10 67367661 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5290 chr10 67372773 . a aCACGCCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5291 chr10 67384748 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5292 chr10 67388264 . G C 5.46 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5293 chr10 67403826 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5294 chr10 67431568 . G C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 5295 chr10 67437101 . G T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 5296 chr10 67437742 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5297 chr10 67442724 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 5298 chr10 67451889 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5299 chr10 67468156 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5300 chr10 67478606 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5301 chr10 67478616 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5302 chr10 67499117 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5303 chr10 67527879 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 5304 chr10 67538471 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5305 chr10 67538745 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5306 chr10 67573918 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5307 chr10 67603910 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5308 chr10 67619180 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 5309 chr10 67627529 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 5310 chr10 67628544 . G A 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 5311 chr10 67654904 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5312 chr10 67670357 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5313 chr10 67695680 . C T 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 5314 chr10 67726514 . A C 10.2 . DP=17;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 41,6,0:2:0:1/1:49 | |
| 5315 chr10 67733328 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 5316 chr10 67781590 . TTC TTCATTTCTATC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5317 chr10 67810208 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5318 chr10 67847486 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 5319 chr10 67848448 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5320 chr10 67848662 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5321 chr10 67851673 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 5322 chr10 67853152 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5323 chr10 67854220 . G C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 5324 chr10 67868749 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 5325 chr10 67880253 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5326 chr10 67887852 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5327 chr10 67922947 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5328 chr10 67934941 . C G 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5329 chr10 67953047 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5330 chr10 67984757 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5331 chr10 67991394 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5332 chr10 68040325 . C T 49.3 . DP=31;AF1=1;CI95=0.5,1;DP4=0,0,2,3;MQ=49 PL:DP:SP:GT:GQ 82,15,0:5:0:1/1:75 | |
| 5333 chr10 68046840 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5334 chr10 68060650 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5335 chr10 68066443 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 5336 chr10 68073122 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5337 chr10 68073130 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5338 chr10 68080950 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5339 chr10 68089781 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 5340 chr10 68093683 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5341 chr10 68123281 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5342 chr10 68128573 . TAA T 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 5343 chr10 68157117 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5344 chr10 68157131 . TTGAT TTGATGAT 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5345 chr10 68173242 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 5346 chr10 68182093 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5347 chr10 68191438 . a aCGGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5348 chr10 68209678 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5349 chr10 68216393 . ca cAAa 11.8 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 5350 chr10 68218325 . ttaa t 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 5351 chr10 68237221 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5352 chr10 68255429 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 5353 chr10 68267210 . ttatctaact tTATCTAACtatctaact 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5354 chr10 68270256 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5355 chr10 68280359 . A G 13.2 . DP=10;AF1=0.5006;CI95=0.5,0.5;DP4=2,0,3,0;MQ=49;PV4=1,1,0.16,1 PL:DP:SP:GT:GQ 43,0,26:5:0:0/1:29 | |
| 5356 chr10 68320568 . at aTCt 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 5357 chr10 68353076 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5358 chr10 68381574 . T G 6.79 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 37,6,0:2:0:1/1:49 | |
| 5359 chr10 68422535 . ct cTTATt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5360 chr10 68442144 . G GCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5361 chr10 68490511 . g gTT 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 5362 chr10 68506169 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5363 chr10 68525839 . G T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 5364 chr10 68528010 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5365 chr10 68535298 . A C 6.2 . DP=27;AF1=0.4999;CI95=0.5,0.5;DP4=0,11,0,5;MQ=50;PV4=1,0.026,0.051,1 PL:DP:SP:GT:GQ 35,0,119:16:0:0/1:38 | |
| 5366 chr10 68541631 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5367 chr10 68556851 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 5368 chr10 68565561 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5369 chr10 68568209 . t tTCGACGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5370 chr10 68572830 . T TCGAAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5371 chr10 68588259 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5372 chr10 68588558 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5373 chr10 68601560 . AACACA AACACACACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5374 chr10 68606644 . G C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 5375 chr10 68609459 . aag a 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 5376 chr10 68613367 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5377 chr10 68628673 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5378 chr10 68639670 . G C 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 5379 chr10 68643062 . G T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5380 chr10 68657014 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 5381 chr10 68657552 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5382 chr10 68668020 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 5383 chr10 68672350 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 5384 chr10 68686431 . T C 15.9 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47 PL:DP:SP:GT:GQ 47,6,0:2:0:1/1:49 | |
| 5385 chr10 68688393 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 5386 chr10 68714161 . ACGC ACGCGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5387 chr10 68716567 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5388 chr10 68746255 . G A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 5389 chr10 68784296 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5390 chr10 68814101 . T C 4.13 . DP=3;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,40:2:0:0/1:34 | |
| 5391 chr10 68814541 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5392 chr10 68816080 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 5393 chr10 68825620 . T C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 5394 chr10 68830139 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5395 chr10 68849737 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5396 chr10 68860694 . GAGA G 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 5397 chr10 68865926 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 5398 chr10 68907630 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5399 chr10 68907650 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5400 chr10 68937506 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5401 chr10 68942653 . t tGTGAAAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5402 chr10 68966367 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5403 chr10 68970465 . G C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 5404 chr10 68974527 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 5405 chr10 68979343 . C G 51 . DP=41;AF1=0.5;CI95=0.5,0.5;DP4=17,9,7,1;MQ=49;PV4=0.39,0.0001,4e-07,1 PL:DP:SP:GT:GQ 81,0,255:34:4:0/1:84 | |
| 5406 chr10 69005502 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5407 chr10 69005638 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5408 chr10 69019938 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5409 chr10 69028559 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5410 chr10 69049483 . A T 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5411 chr10 69066677 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 5412 chr10 69067541 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5413 chr10 69073789 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 5414 chr10 69094988 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 5415 chr10 69101834 . ct cTGAAGGt 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 5416 chr10 69111463 . T A 5.56 . DP=2;AF1=0.5162;CI95=0.5,0.5;DP4=0,1,1,0;MQ=42;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,12:2:0:0/1:15 | |
| 5417 chr10 69117231 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5418 chr10 69134941 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5419 chr10 69140778 . A C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 5420 chr10 69183682 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5421 chr10 69245358 . AACACA AACA 53.2 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=50 PL:DP:SP:GT:GQ 92,6,0:2:0:1/1:49 | |
| 5422 chr10 69254709 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5423 chr10 69282287 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5424 chr10 69292125 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5425 chr10 69294669 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5426 chr10 69299718 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 5427 chr10 69302174 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5428 chr10 69309703 . a aGACAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5429 chr10 69324989 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5430 chr10 69328061 . C G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 5431 chr10 69335183 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5432 chr10 69348549 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5433 chr10 69358154 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5434 chr10 69366602 . T C 37 . DP=32;AF1=0.9999;CI95=0.5,1;DP4=0,1,6,1;MQ=50;PV4=0.25,0.22,0.31,1 PL:DP:SP:GT:GQ 67,3,0:8:0:1/1:41 | |
| 5435 chr10 69367741 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5436 chr10 69384458 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 5437 chr10 69389132 . AG AGTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5438 chr10 69393026 . A T 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5439 chr10 69407328 . AG AGCG 5.08 . INDEL;DP=11;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,1,1,0.35 PL:DP:SP:GT:GQ 41,0,44:3:0:0/1:42 | |
| 5440 chr10 69416852 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5441 chr10 69435299 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5442 chr10 69441063 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 5443 chr10 69445569 . a aGCAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5444 chr10 69461201 . a aCAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5445 chr10 69477223 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5446 chr10 69530208 . TA TATGA 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 5447 chr10 69553354 . TA TATCGAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5448 chr10 69553683 . GCCCC GCCC 3.25 . INDEL;DP=7;AF1=0.5001;CI95=0.5,0.5;DP4=0,2,1,1;MQ=46;PV4=1,0.014,1,1 PL:DP:SP:GT:GQ 38,0,34:4:0:0/1:36 | |
| 5449 chr10 69565413 . C T 24 . DP=5;AF1=0.5;CI95=0.5,0.5;DP4=2,0,2,1;MQ=49;PV4=1,0.015,0.2,0.029 PL:DP:SP:GT:GQ 54,0,75:5:0:0/1:57 | |
| 5450 chr10 69569621 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5451 chr10 69573102 . c cGG 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 5452 chr10 69583206 . G A 3.55 . DP=5;AF1=0.5014;CI95=0.5,0.5;DP4=0,1,0,3;MQ=50;PV4=1,0,1,1 PL:DP:SP:GT:GQ 31,0,22:4:0:0/1:24 | |
| 5453 chr10 69609088 . A T 23.8 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=39 PL:DP:SP:GT:GQ 55,6,0:2:0:1/1:49 | |
| 5454 chr10 69616700 . ATTC ATTCCTTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5455 chr10 69637785 . C T 3.05 . DP=3;AF1=0.5078;CI95=0.5,0.5;DP4=0,1,0,2;MQ=48;PV4=1,0.17,0.33,0.12 PL:DP:SP:GT:GQ 30,0,15:3:0:0/1:18 | |
| 5456 chr10 69647330 . CGG CG 14.4 . INDEL;DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=50 PL:DP:SP:GT:GQ 53,6,0:2:0:1/1:49 | |
| 5457 chr10 69651319 . T C 56 . DP=47;AF1=0.5;CI95=0.5,0.5;DP4=11,24,4,7;MQ=49;PV4=1,4.4e-11,1.6e-21,1 PL:DP:SP:GT:GQ 86,0,255:46:0:0/1:89 | |
| 5458 chr10 69687599 . C T 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 5459 chr10 69714314 . A G 36 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=7,0,8,1;MQ=49;PV4=1,2.4e-08,0.097,1 PL:DP:SP:GT:GQ 66,0,175:16:0:0/1:69 | |
| 5460 chr10 69723466 . C A 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5461 chr10 69743087 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5462 chr10 69743704 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5463 chr10 69824754 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5464 chr10 69830822 . T TGCA 5.79 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 42,0,44:2:0:0/1:43 | |
| 5465 chr10 69840181 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 5466 chr10 69850502 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5467 chr10 69868137 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5468 chr10 69879488 . ATCT AT 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 5469 chr10 69884743 . A G 4.78 . DP=2;AF1=0.5019;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,21:2:0:0/1:24 | |
| 5470 chr10 69886152 . T A 3.01 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,31:2:0:0/1:30 | |
| 5471 chr10 69899215 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 5472 chr10 69902944 . gagg gAGGATagg 3.25 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,1;MQ=50;PV4=1,1,1,0.21 PL:DP:SP:GT:GQ 38,0,114:4:0:0/1:41 | |
| 5473 chr10 69905300 . G A 76.1 . DP=10;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=48 PL:DP:SP:GT:GQ 109,21,0:7:0:1/1:84 | |
| 5474 chr10 69909756 . T C 41 . DP=21;AF1=0.5;CI95=0.5,0.5;DP4=10,0,5,0;MQ=49;PV4=1,0.039,0.00012,0.26 PL:DP:SP:GT:GQ 71,0,180:15:0:0/1:74 | |
| 5475 chr10 69909899 . G A 34 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=47 PL:DP:SP:GT:GQ 66,9,0:3:0:1/1:63 | |
| 5476 chr10 69922971 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5477 chr10 69924751 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5478 chr10 69927483 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5479 chr10 69934258 . C G 46 . DP=26;AF1=0.5004;CI95=0.5,0.5;DP4=1,1,1,5;MQ=49;PV4=0.46,0.11,0.039,1 PL:DP:SP:GT:GQ 76,0,28:8:3:0/1:31 | |
| 5480 chr10 69934467 . A G 40 . DP=10;AF1=1;CI95=1,1;DP4=0,0,0,8;MQ=50 PL:DP:SP:GT:GQ 73,24,0:8:0:1/1:96 | |
| 5481 chr10 69935059 . A G 12 . DP=10;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 43,6,0:2:0:1/1:49 | |
| 5482 chr10 69954290 . G A 72.8 . DP=24;AF1=1;CI95=0.5,1;DP4=0,1,0,19;MQ=48;PV4=1,1.3e-05,0.27,0.064 PL:DP:SP:GT:GQ 105,10,0:20:0:1/1:60 | |
| 5483 chr10 69959242 . C A 22 . DP=38;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=48 PL:DP:SP:GT:GQ 54,9,0:3:0:1/1:63 | |
| 5484 chr10 69959345 . GCTGGGAC GC 99 . INDEL;DP=32;AF1=0.5;CI95=0.5,0.5;DP4=0,4,1,21;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 255,0,61:26:0:0/1:64 | |
| 5485 chr10 69959397 . G A 66.1 . DP=20;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=48 PL:DP:SP:GT:GQ 99,21,0:7:0:1/1:84 | |
| 5486 chr10 70002440 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5487 chr10 70002786 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5488 chr10 70015342 . G T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 5489 chr10 70020396 . G A 24.8 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 56,6,0:2:0:1/1:49 | |
| 5490 chr10 70028694 . C G 11.3 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 5491 chr10 70035605 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5492 chr10 70043916 . G A 35 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=5,0,3,0;MQ=47;PV4=1,0.076,0.045,1 PL:DP:SP:GT:GQ 65,0,144:8:0:0/1:68 | |
| 5493 chr10 70044031 . T C 59 . DP=23;AF1=0.5;CI95=0.5,0.5;DP4=0,12,0,6;MQ=49;PV4=1,0.00023,0.00015,1 PL:DP:SP:GT:GQ 89,0,221:18:0:0/1:92 | |
| 5494 chr10 70044931 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5495 chr10 70045440 . a aGTACG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5496 chr10 70051928 . A G 99 . DP=44;AF1=0.5;CI95=0.5,0.5;DP4=15,8,7,10;MQ=47;PV4=0.2,0.2,5e-15,1 PL:DP:SP:GT:GQ 255,0,255:40:7:0/1:99 | |
| 5497 chr10 70081922 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5498 chr10 70097501 . TTt TTTGGGTt 7.35 . INDEL;DP=4;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 5499 chr10 70097502 . Tttttgttttgttttgttttgttt TTTTTGttttgttttgttttgttttgttt 34.4 . INDEL;DP=4;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=31 PL:DP:SP:GT:GQ 74,9,0:3:0:1/1:63 | |
| 5500 chr10 70097779 . G C 6.2 . DP=8;AF1=0.4999;CI95=0.5,0.5;DP4=0,5,0,3;MQ=48;PV4=1,0.13,1,1 PL:DP:SP:GT:GQ 35,0,100:8:0:0/1:38 | |
| 5501 chr10 70101257 . AATTGAT AAT 64.5 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=1,0,3,0;MQ=50;PV4=1,0.15,1,1 PL:DP:SP:GT:GQ 102,0,38:4:0:0/1:41 | |
| 5502 chr10 70105560 . G A 3.56 . DP=38;AF1=0.503;CI95=0.5,0.5;DP4=0,1,1,1;MQ=49;PV4=1,0.23,0.33,1 PL:DP:SP:GT:GQ 31,0,19:3:0:0/1:22 | |
| 5503 chr10 70113267 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 5504 chr10 70113351 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 5505 chr10 70136476 . gtttttt gttt 3.8 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 39,0,44:2:0:0/1:41 | |
| 5506 chr10 70143774 . C T 28 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=48 PL:DP:SP:GT:GQ 60,9,0:3:0:1/1:63 | |
| 5507 chr10 70147485 . g gAC 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 5508 chr10 70161950 . a aCG 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 5509 chr10 70173309 . CA CATAA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 5510 chr10 70239161 . GAT G 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 5511 chr10 70252823 . A ATACAGGCAGAGC 7.35 . INDEL;DP=4;AF1=0.5006;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,26:2:0:0/1:29 | |
| 5512 chr10 70258846 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5513 chr10 70290829 . G A 5.46 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5514 chr10 70297086 . C A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 5515 chr10 70313748 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5516 chr10 70340395 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5517 chr10 70340718 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5518 chr10 70392313 . AG AGACG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5519 chr10 70405855 . A G 99 . DP=12;AF1=1;CI95=1,1;DP4=0,0,4,6;MQ=49 PL:DP:SP:GT:GQ 148,30,0:10:0:1/1:99 | |
| 5520 chr10 70427972 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5521 chr10 70434181 . G A 3.01 . DP=3;AF1=0.4997;CI95=0.5,0.5;DP4=1,1,1,0;MQ=46;PV4=1,0.13,0.055,1 PL:DP:SP:GT:GQ 30,0,89:3:0:0/1:33 | |
| 5522 chr10 70444900 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5523 chr10 70447477 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5524 chr10 70474888 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5525 chr10 70490547 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5526 chr10 70495190 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 5527 chr10 70496791 . G C 6.02 . DP=9;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47 PL:DP:SP:GT:GQ 36,6,0:2:0:1/1:49 | |
| 5528 chr10 70497482 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5529 chr10 70497660 . T G 6.02 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 36,6,0:2:0:1/1:49 | |
| 5530 chr10 70502288 . G A 99 . DP=64;AF1=1;CI95=1,1;DP4=2,1,21,33;MQ=46;PV4=0.56,0.0047,0.0012,1 PL:DP:SP:GT:GQ 255,76,0:57:3:1/1:99 | |
| 5531 chr10 70505172 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5532 chr10 70513426 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5533 chr10 70515383 . T A 18.1 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,3;MQ=48;PV4=1,0.34,0.12,1 PL:DP:SP:GT:GQ 48,0,38:5:0:0/1:41 | |
| 5534 chr10 70516983 . tt tTGt 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5535 chr10 70525498 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5536 chr10 70525591 . G A 12.3 . DP=4;AF1=0.5;CI95=0.5,0.5;DP4=2,0,2,0;MQ=46;PV4=1,0.23,0.0022,1 PL:DP:SP:GT:GQ 42,0,62:4:0:0/1:45 | |
| 5537 chr10 70531441 . G T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 5538 chr10 70538745 . tc tCGTTCCAc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5539 chr10 70564663 . c cCCGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5540 chr10 70600789 . t tCAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5541 chr10 70607912 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 5542 chr10 70614375 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5543 chr10 70628582 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5544 chr10 70636487 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5545 chr10 70639661 . A T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 5546 chr10 70639710 . G C 4.77 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 5547 chr10 70641860 . T C 9.52 . DP=29;AF1=0.5;CI95=0.5,0.5;DP4=5,11,2,3;MQ=50;PV4=1,6.4e-05,0.0021,1 PL:DP:SP:GT:GQ 39,0,255:21:0:0/1:42 | |
| 5548 chr10 70646193 . C T 16.1 . DP=33;AF1=0.5;CI95=0.5,0.5;DP4=0,13,5,0;MQ=49;PV4=0.00012,0.0016,1.1e-05,1 PL:DP:SP:GT:GQ 46,0,217:18:39:0/1:49 | |
| 5549 chr10 70666781 . T G 12.3 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,3;MQ=45;PV4=0.25,0.0095,0.22,1 PL:DP:SP:GT:GQ 42,0,38:4:0:0/1:40 | |
| 5550 chr10 70694171 . T A 14.2 . DP=8;AF1=0.5003;CI95=0.5,0.5;DP4=0,2,0,3;MQ=44;PV4=1,0.42,0.096,1 PL:DP:SP:GT:GQ 44,0,29:5:0:0/1:32 | |
| 5551 chr10 70694174 . A C 9.31 . DP=9;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=35 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 5552 chr10 70694231 . ATTTTTT ATTT 3.25 . INDEL;DP=3;AF1=0.5004;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,28:2:0:0/1:31 | |
| 5553 chr10 70694583 . G T 3.01 . DP=15;AF1=0.4997;CI95=0.5,0.5;DP4=4,0,0,2;MQ=46;PV4=0.067,0.4,1,1 PL:DP:SP:GT:GQ 30,0,75:6:12:0/1:33 | |
| 5554 chr10 70702338 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5555 chr10 70722856 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5556 chr10 70725128 . A G 88 . DP=20;AF1=0.5;CI95=0.5,0.5;DP4=5,5,5,3;MQ=49;PV4=0.66,0.00029,0.0018,0.47 PL:DP:SP:GT:GQ 118,0,255:18:2:0/1:99 | |
| 5557 chr10 70730044 . A C 14.2 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=5,0,0,4;MQ=48;PV4=0.0079,5.1e-06,0.021,1 PL:DP:SP:GT:GQ 44,0,155:9:21:0/1:47 | |
| 5558 chr10 70748715 . CTG CTGAGGGTG 12.7 . INDEL;DP=6;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5559 chr10 70748716 . TG TGACAG 12.7 . INDEL;DP=6;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5560 chr10 70770655 . GC GGATAC 5.08 . INDEL;DP=13;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,50:3:0:0/1:43 | |
| 5561 chr10 70771899 . a aACAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5562 chr10 70783031 . A G 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,37:2:0:0/1:37 | |
| 5563 chr10 70783128 . C A 39 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,2,1;MQ=46 PL:DP:SP:GT:GQ 71,9,0:3:0:1/1:63 | |
| 5564 chr10 70783250 . G T 17.1 . DP=6;AF1=0.5;CI95=0.5,0.5;DP4=2,1,2,1;MQ=39;PV4=1,1,0.0074,0.06 PL:DP:SP:GT:GQ 47,0,56:6:0:0/1:49 | |
| 5565 chr10 70783324 . T C 3.55 . DP=17;AF1=0.5023;CI95=0.5,0.5;DP4=1,0,1,1;MQ=49;PV4=1,0.24,0.33,1 PL:DP:SP:GT:GQ 31,0,20:3:0:0/1:23 | |
| 5566 chr10 70784890 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5567 chr10 70789608 . G C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 5568 chr10 70799550 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 5569 chr10 70822636 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 5570 chr10 70830846 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=46 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5571 chr10 70836358 . T C 3.98 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=50 PL:DP:SP:GT:GQ 33,6,0:2:0:1/1:49 | |
| 5572 chr10 70860638 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 5573 chr10 70863980 . AACAT A 33.5 . INDEL;DP=7;AF1=0.5;CI95=0.5,0.5;DP4=0,5,0,2;MQ=50;PV4=1,0.29,1,1 PL:DP:SP:GT:GQ 71,0,154:7:0:0/1:74 | |
| 5574 chr10 70883210 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5575 chr10 70893565 . C G 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=43;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,36:2:0:0/1:34 | |
| 5576 chr10 70911773 . TAAA T 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 5577 chr10 70917703 . C T 3.54 . DP=4;AF1=0.4998;CI95=0.5,0.5;DP4=3,0,1,0;MQ=48;PV4=1,0.33,0,1 PL:DP:SP:GT:GQ 31,0,105:4:0:0/1:34 | |
| 5578 chr10 70928380 . A C 3.54 . DP=17;AF1=0.4998;CI95=0.5,0.5;DP4=3,1,0,2;MQ=49;PV4=0.4,0.033,0.004,0.35 PL:DP:SP:GT:GQ 31,0,140:6:4:0/1:34 | |
| 5579 chr10 70940191 . C T 63.1 . DP=16;AF1=1;CI95=1,1;DP4=0,0,2,5;MQ=49 PL:DP:SP:GT:GQ 96,21,0:7:0:1/1:84 | |
| 5580 chr10 70951137 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5581 chr10 70962147 . TTG TTGCTCCTGGTCTG 3.25 . INDEL;DP=7;AF1=0.5;CI95=0.5,0.5;DP4=3,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,46:4:0:0/1:40 | |
| 5582 chr10 70962913 . a aGG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 5583 chr10 70972872 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5584 chr10 70975642 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 5585 chr10 70992664 . C T 64 . DP=24;AF1=1;CI95=1,1;DP4=0,0,0,17;MQ=50 PL:DP:SP:GT:GQ 97,51,0:17:0:1/1:99 | |
| 5586 chr10 70992734 . C G 10.4 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=3,3,0,4;MQ=48;PV4=0.2,0.031,0.17,0.21 PL:DP:SP:GT:GQ 40,0,149:10:7:0/1:43 | |
| 5587 chr10 70992912 . A T 99 . DP=48;AF1=1;CI95=1,1;DP4=1,0,9,28;MQ=47;PV4=0.26,1,0.11,1 PL:DP:SP:GT:GQ 255,96,0:38:0:1/1:99 | |
| 5588 chr10 70992949 . T A 93 . DP=35;AF1=1;CI95=1,1;DP4=0,1,0,29;MQ=48;PV4=1,0.13,0.2,1 PL:DP:SP:GT:GQ 126,61,0:30:0:1/1:99 | |
| 5589 chr10 71002851 . A T 3.41 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 32,6,0:2:0:1/1:49 | |
| 5590 chr10 71016931 . C T 6.79 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 37,6,0:2:0:1/1:49 | |
| 5591 chr10 71016947 . C G 13.2 . DP=8;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,4;MQ=49;PV4=1,1.9e-06,0.25,0.28 PL:DP:SP:GT:GQ 43,0,133:8:0:0/1:46 | |
| 5592 chr10 71018660 . T C 53 . DP=21;AF1=0.502;CI95=0.5,0.5;DP4=1,1,0,6;MQ=47;PV4=0.25,1,0.35,1 PL:DP:SP:GT:GQ 83,0,21:8:0:0/1:24 | |
| 5593 chr10 71021104 . C T 67 . DP=23;AF1=0.5;CI95=0.5,0.5;DP4=0,12,0,10;MQ=49;PV4=1,7.1e-08,0.0023,1 PL:DP:SP:GT:GQ 97,0,220:22:0:0/1:99 | |
| 5594 chr10 71023482 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5595 chr10 71032151 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5596 chr10 71035011 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5597 chr10 71041409 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5598 chr10 71071054 . g gCGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5599 chr10 71083248 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5600 chr10 71085372 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5601 chr10 71090360 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5602 chr10 71097344 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 5603 chr10 71100117 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 5604 chr10 71103597 . C G 99 . DP=43;AF1=0.5;CI95=0.5,0.5;DP4=8,11,9,12;MQ=49;PV4=1,2e-14,0.031,1 PL:DP:SP:GT:GQ 141,0,255:40:0:0/1:99 | |
| 5605 chr10 71119837 . C T 13.2 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=0,7,0,5;MQ=49;PV4=1,1,0.31,0.057 PL:DP:SP:GT:GQ 43,0,76:12:0:0/1:46 | |
| 5606 chr10 71136851 . T C 67 . DP=35;AF1=0.5;CI95=0.5,0.5;DP4=6,15,2,10;MQ=49;PV4=0.68,3.1e-06,5.4e-05,1 PL:DP:SP:GT:GQ 97,0,255:33:2:0/1:99 | |
| 5607 chr10 71144702 . G A 99 . DP=24;AF1=1;CI95=1,1;DP4=0,0,2,9;MQ=48 PL:DP:SP:GT:GQ 140,33,0:11:0:1/1:99 | |
| 5608 chr10 71145096 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 5609 chr10 71150312 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5610 chr10 71172222 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 5611 chr10 71175941 . C T 20 . DP=35;AF1=0.5;CI95=0.5,0.5;DP4=5,10,5,1;MQ=49;PV4=0.063,2.2e-06,0.0029,1 PL:DP:SP:GT:GQ 50,0,255:21:12:0/1:53 | |
| 5612 chr10 71176012 . A G 99 . DP=55;AF1=1;CI95=1,1;DP4=0,0,10,6;MQ=49 PL:DP:SP:GT:GQ 160,48,0:16:0:1/1:99 | |
| 5613 chr10 71182418 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 5614 chr10 71189983 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 5615 chr10 71197156 . G A 4.8 . DP=2;AF1=0.5049;CI95=0.5,0.5;DP4=0,1,0,1;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,17:2:0:0/1:20 | |
| 5616 chr10 71209130 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5617 chr10 71218121 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5618 chr10 71218964 . TCA T 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 5619 chr10 71264125 . ggt gGTGTgt 3.25 . INDEL;DP=8;AF1=0.5;CI95=0.5,0.5;DP4=3,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,114:4:0:0/1:41 | |
| 5620 chr10 71264563 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5621 chr10 71266675 . G A 6.2 . DP=6;AF1=0.4999;CI95=0.5,0.5;DP4=1,1,0,2;MQ=49;PV4=1,0.2,0.048,1 PL:DP:SP:GT:GQ 35,0,65:4:0:0/1:38 | |
| 5622 chr10 71286383 . t tCTGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5623 chr10 71287881 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 5624 chr10 71294411 . T G 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5625 chr10 71297768 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5626 chr10 71307578 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 5627 chr10 71309194 . A T 24.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=44 PL:DP:SP:GT:GQ 56,6,0:2:0:1/1:49 | |
| 5628 chr10 71323176 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 5629 chr10 71329677 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5630 chr10 71338418 . TGG T 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 5631 chr10 71338468 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5632 chr10 71339616 . G A 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5633 chr10 71346429 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5634 chr10 71357912 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 5635 chr10 71358047 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5636 chr10 71361091 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5637 chr10 71380159 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5638 chr10 71391538 . T C 99 . DP=21;AF1=0.5;CI95=0.5,0.5;DP4=6,6,2,7;MQ=48;PV4=0.37,0.047,1.1e-06,1 PL:DP:SP:GT:GQ 143,0,255:21:4:0/1:99 | |
| 5639 chr10 71392495 . T A 3.01 . DP=7;AF1=0.4997;CI95=0.5,0.5;DP4=5,0,2,0;MQ=48;PV4=1,0.012,0.11,1 PL:DP:SP:GT:GQ 30,0,152:7:0:0/1:33 | |
| 5640 chr10 71392557 . C T 7.8 . DP=8;AF1=0.5;CI95=0.5,0.5;DP4=1,4,0,3;MQ=48;PV4=1,0.11,0.01,0.17 PL:DP:SP:GT:GQ 37,0,142:8:0:0/1:40 | |
| 5641 chr10 71392692 . T C 19 . DP=28;AF1=1;CI95=0.5,1;DP4=0,0,2,1;MQ=49 PL:DP:SP:GT:GQ 51,9,0:3:0:1/1:63 | |
| 5642 chr10 71393720 . GCCTCTTTC G 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=48 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 5643 chr10 71394166 . G T 6.79 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 37,6,0:2:0:1/1:49 | |
| 5644 chr10 71398694 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5645 chr10 71408420 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5646 chr10 71411608 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5647 chr10 71454696 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 5648 chr10 71477144 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 5649 chr10 71495396 . TCC TCCTACC 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5650 chr10 71514341 . aa aATACACa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5651 chr10 71521429 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5652 chr10 71521474 . G A 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=43;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,38:2:0:0/1:37 | |
| 5653 chr10 71526601 . G T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 5654 chr10 71550720 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 5655 chr10 71560434 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5656 chr10 71568578 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5657 chr10 71571521 . G A 13.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 5658 chr10 71596103 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5659 chr10 71596611 . T A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 5660 chr10 71612558 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 5661 chr10 71620043 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 5662 chr10 71625964 . GCC G 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 5663 chr10 71640717 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 5664 chr10 71642919 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5665 chr10 71647194 . T TCGAAGTCGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5666 chr10 71651070 . C G 6.98 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,44:2:0:0/1:38 | |
| 5667 chr10 71662174 . G GAGAGAGATA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5668 chr10 71665584 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5669 chr10 71666176 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5670 chr10 71688733 . C A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 5671 chr10 71693657 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5672 chr10 71695141 . A T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 5673 chr10 71705498 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5674 chr10 71724107 . GGAC GGACGAGAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5675 chr10 71728900 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 5676 chr10 71728908 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5677 chr10 71765688 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5678 chr10 71778119 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5679 chr10 71812544 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5680 chr10 71814773 . G A 8.44 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 39,6,0:2:0:1/1:49 | |
| 5681 chr10 71820607 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5682 chr10 71838469 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=46 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5683 chr10 71840118 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5684 chr10 71842195 . aaaagaaagaaagaaaga aaaagaaagaaaga 5.8 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 5685 chr10 71849821 . A G 9.31 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 5686 chr10 71855597 . G A 5.46 . DP=8;AF1=0.4999;CI95=0.5,0.5;DP4=0,4,0,3;MQ=49;PV4=1,0.0057,0.065,0.47 PL:DP:SP:GT:GQ 34,0,127:7:0:0/1:37 | |
| 5687 chr10 71862650 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5688 chr10 71864175 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5689 chr10 71874048 . G A 99 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=6,3,5,9;MQ=46;PV4=0.21,8.4e-07,6e-08,1 PL:DP:SP:GT:GQ 255,0,255:23:7:0/1:99 | |
| 5690 chr10 71874683 . G A 52 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=6,0,3,2;MQ=47;PV4=0.18,0.039,0.12,0.43 PL:DP:SP:GT:GQ 82,0,145:11:7:0/1:85 | |
| 5691 chr10 71874866 . T C 53 . DP=31;AF1=0.5;CI95=0.5,0.5;DP4=0,12,2,5;MQ=49;PV4=0.12,3e-09,1.8e-05,0.42 PL:DP:SP:GT:GQ 83,0,226:19:9:0/1:86 | |
| 5692 chr10 71874962 . A G 11.3 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,3;MQ=49;PV4=1,0.00017,0.19,0.13 PL:DP:SP:GT:GQ 41,0,110:6:0:0/1:44 | |
| 5693 chr10 71902473 . G T,C 20.8 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,2,1;MQ=44 PL:DP:SP:GT:GQ 66,20,51,14,0,51:3:0:1/1:49 | |
| 5694 chr10 71902810 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 5695 chr10 71913416 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5696 chr10 71969062 . G A 24 . DP=11;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=48 PL:DP:SP:GT:GQ 56,9,0:3:0:1/1:63 | |
| 5697 chr10 71978528 . T G 4.77 . DP=12;AF1=0.4999;CI95=0.5,0.5;DP4=5,2,0,3;MQ=49;PV4=0.17,0.12,0.17,1 PL:DP:SP:GT:GQ 33,0,157:10:8:0/1:36 | |
| 5698 chr10 71984183 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5699 chr10 71988938 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 5700 chr10 71995429 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5701 chr10 72000473 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 5702 chr10 72008662 . t tGG 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 5703 chr10 72016043 . g gGGAGAGACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5704 chr10 72016469 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5705 chr10 72027561 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5706 chr10 72028494 . a aG 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 5707 chr10 72081282 . CTCTA C 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5708 chr10 72101745 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5709 chr10 72131625 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5710 chr10 72140446 . ATA ATAGAGAGTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5711 chr10 72151799 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 5712 chr10 72154606 . c cGGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5713 chr10 72157013 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5714 chr10 72162379 . T A 5.46 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,44:2:0:0/1:37 | |
| 5715 chr10 72173453 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5716 chr10 72195439 . T C 22 . DP=8;AF1=0.5;CI95=0.5,0.5;DP4=2,2,2,1;MQ=49;PV4=1,0.016,0.073,1 PL:DP:SP:GT:GQ 52,0,147:7:0:0/1:55 | |
| 5717 chr10 72210974 . CG CGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5718 chr10 72229834 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5719 chr10 72239226 . TC TCCCCGACC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5720 chr10 72239902 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5721 chr10 72243546 . GGA GGACAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5722 chr10 72255058 . T C 6.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5723 chr10 72261767 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 5724 chr10 72276896 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5725 chr10 72288964 . GCCCCCCCCCCCCCCCCCC GCCCCCCCCCCC 3.27 . INDEL;DP=16;AF1=0.505;CI95=0.5,0.5;DP4=2,0,2,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,17:4:0:0/1:20 | |
| 5726 chr10 72297567 . G A 45 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=0,2,5,0;MQ=48;PV4=0.048,0.17,0.031,1 PL:DP:SP:GT:GQ 75,0,40:7:13:0/1:43 | |
| 5727 chr10 72298569 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5728 chr10 72300436 . T TCTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5729 chr10 72300770 . G T 11.5 . DP=10;AF1=0.5207;CI95=0.5,1;DP4=1,0,2,0;MQ=46;PV4=1,1,0.19,0.36 PL:DP:SP:GT:GQ 41,0,11:3:0:0/1:14 | |
| 5730 chr10 72300780 . C T 6.2 . DP=7;AF1=0.4999;CI95=0.5,0.5;DP4=3,0,2,0;MQ=47;PV4=1,0.14,0.00037,1 PL:DP:SP:GT:GQ 35,0,93:5:0:0/1:38 | |
| 5731 chr10 72313561 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5732 chr10 72317984 . CAT CATTGCAGTATAT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 5733 chr10 72333602 . T A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 5734 chr10 72338891 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5735 chr10 72339914 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5736 chr10 72346080 . C T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 5737 chr10 72355847 . A ATGAGG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 5738 chr10 72357713 . C T 63 . DP=5;AF1=0.501;CI95=0.5,0.5;DP4=1,0,4,0;MQ=43;PV4=1,0.34,0.2,0.41 PL:DP:SP:GT:GQ 93,0,24:5:0:0/1:27 | |
| 5739 chr10 72358751 . G A 23 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=0,7,0,4;MQ=49;PV4=1,0.0017,0.072,1 PL:DP:SP:GT:GQ 53,0,173:11:0:0/1:56 | |
| 5740 chr10 72360081 . C T 21 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=16,0,7,0;MQ=49;PV4=1,5.9e-08,0.012,1 PL:DP:SP:GT:GQ 51,0,237:23:0:0/1:54 | |
| 5741 chr10 72382617 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5742 chr10 72397329 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5743 chr10 72411292 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5744 chr10 72413796 . TG TGGAAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5745 chr10 72427315 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 5746 chr10 72434464 . C T 39 . DP=8;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,3;MQ=47;PV4=1,0.23,0.00024,0.19 PL:DP:SP:GT:GQ 69,0,89:6:0:0/1:72 | |
| 5747 chr10 72439496 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5748 chr10 72458722 . G A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 5749 chr10 72459243 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 5750 chr10 72460258 . C G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 5751 chr10 72468599 . TGGG TGGGGG 12.7 . INDEL;DP=5;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5752 chr10 72470378 . ACA ACATGCCCTCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5753 chr10 72472718 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 5754 chr10 72478651 . t tGC 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 5755 chr10 72480111 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5756 chr10 72480607 . GAC GACAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5757 chr10 72489872 . C T 8.64 . DP=13;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,3;MQ=50;PV4=1,0.12,0.19,1 PL:DP:SP:GT:GQ 38,0,84:6:0:0/1:41 | |
| 5758 chr10 72490825 . C G 6.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5759 chr10 72491926 . G A 17.7 . DP=6;AF1=0.5939;CI95=0.5,1;DP4=1,0,3,0;MQ=47;PV4=1,1,0.24,1 PL:DP:SP:GT:GQ 47,0,5:4:0:0/1:7 | |
| 5760 chr10 72494778 . G A 25.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 57,6,0:2:0:1/1:49 | |
| 5761 chr10 72496375 . A G 13.2 . DP=5;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 5762 chr10 72500863 . C G 21.1 . DP=31;AF1=0.5102;CI95=0.5,0.5;DP4=0,1,3,0;MQ=48;PV4=0.25,0.43,0.21,1 PL:DP:SP:GT:GQ 51,0,14:4:0:0/1:17 | |
| 5763 chr10 72501819 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5764 chr10 72512069 . C G 21.8 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=39 PL:DP:SP:GT:GQ 53,6,0:2:0:1/1:49 | |
| 5765 chr10 72518414 . aaagttc a 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5766 chr10 72531257 . AGG AGGGG 12.7 . INDEL;DP=4;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5767 chr10 72537808 . T TAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5768 chr10 72550525 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 5769 chr10 72553862 . A G 3.54 . DP=4;AF1=0.4998;CI95=0.5,0.5;DP4=3,0,1,0;MQ=48;PV4=1,0.072,0,1 PL:DP:SP:GT:GQ 31,0,114:4:0:0/1:34 | |
| 5770 chr10 72567659 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5771 chr10 72576564 . CA CACCTA 3.25 . INDEL;DP=7;AF1=0.5;CI95=0.5,0.5;DP4=2,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,129:4:0:0/1:41 | |
| 5772 chr10 72576579 . G A 4.77 . DP=9;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,2;MQ=47;PV4=1,0.077,0.33,0.037 PL:DP:SP:GT:GQ 33,0,41:3:0:0/1:35 | |
| 5773 chr10 72600016 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 5774 chr10 72604271 . C A 13.2 . DP=28;AF1=0.5;CI95=0.5,0.5;DP4=15,1,0,6;MQ=49;PV4=9.4e-05,0.00022,0.001,0.36 PL:DP:SP:GT:GQ 43,0,248:22:40:0/1:46 | |
| 5775 chr10 72605135 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5776 chr10 72617256 . A T 10.4 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=50 PL:DP:SP:GT:GQ 42,9,0:3:0:1/1:63 | |
| 5777 chr10 72619205 . C T 75.1 . DP=28;AF1=0.508;CI95=0.5,0.5;DP4=1,1,6,3;MQ=49;PV4=1,0.15,0.22,1 PL:DP:SP:GT:GQ 105,0,15:11:0:0/1:18 | |
| 5778 chr10 72619742 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 5779 chr10 72633458 . C T 59 . DP=20;AF1=0.5;CI95=0.5,0.5;DP4=0,8,0,12;MQ=49;PV4=1,1.4e-09,0.053,1 PL:DP:SP:GT:GQ 89,0,184:20:0:0/1:92 | |
| 5780 chr10 72636182 . A G 4.61 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=50 PL:DP:SP:GT:GQ 34,6,0:2:0:1/1:49 | |
| 5781 chr10 72636200 . gaaa gAAaaa 5.08 . INDEL;DP=6;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,1,1,0.36 PL:DP:SP:GT:GQ 41,0,64:3:0:0/1:44 | |
| 5782 chr10 72665814 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5783 chr10 72668184 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5784 chr10 72670601 . G A 3.01 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,30:2:0:0/1:30 | |
| 5785 chr10 72677063 . tc tCGCCc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5786 chr10 72679571 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5787 chr10 72682869 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5788 chr10 72689286 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5789 chr10 72693666 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5790 chr10 72694791 . G C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 5791 chr10 72695225 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 5792 chr10 72702903 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5793 chr10 72703438 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 5794 chr10 72706789 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 5795 chr10 72716036 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 5796 chr10 72720325 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5797 chr10 72720696 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 5798 chr10 72723511 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5799 chr10 72736307 . GGTGTGTGTGTGTG GGTGTGTGTGTG 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 5800 chr10 72750500 . GG GGAGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5801 chr10 72769767 . T A 13.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 5802 chr10 72774514 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 5803 chr10 72793055 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5804 chr10 72815199 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5805 chr10 72819351 . GCCCC GCC 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 5806 chr10 72829189 . AG AGATCG 5.8 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 5807 chr10 72830361 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 5808 chr10 72835735 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 5809 chr10 72838459 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5810 chr10 72844794 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 5811 chr10 72850506 . aa aACa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5812 chr10 72858078 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5813 chr10 72864456 . a aACC 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 5814 chr10 72879353 . C G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 5815 chr10 72880343 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 5816 chr10 72885649 . C G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 5817 chr10 72886199 . taagaagaaga taagaaga 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5818 chr10 72888794 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5819 chr10 72894605 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5820 chr10 72897389 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5821 chr10 72903909 . c cATAAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5822 chr10 72904359 . AA AACTGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5823 chr10 72951424 . G A 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 5824 chr10 72965474 . attgag a 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5825 chr10 72984206 . A AGTCGCCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5826 chr10 72998292 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5827 chr10 73023949 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5828 chr10 73026416 . C T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 5829 chr10 73044382 . T A 5.46 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5830 chr10 73047722 . A C 3.02 . DP=2;AF1=0.5002;CI95=0.5,0.5;DP4=0,1,0,1;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,27:2:0:0/1:28 | |
| 5831 chr10 73050637 . CTG CTGTG 33.5 . INDEL;DP=3;AF1=0.5002;CI95=0.5,0.5;DP4=1,0,2,0;MQ=50;PV4=1,1,1,0.077 PL:DP:SP:GT:GQ 71,0,31:3:0:0/1:34 | |
| 5832 chr10 73050774 . G A 72 . DP=29;AF1=0.5;CI95=0.5,0.5;DP4=11,6,2,5;MQ=47;PV4=0.18,0.0066,0.39,0.5 PL:DP:SP:GT:GQ 102,0,255:24:7:0/1:99 | |
| 5833 chr10 73055781 . C T 10.4 . DP=8;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,3;MQ=48;PV4=1,0.021,1,1 PL:DP:SP:GT:GQ 40,0,66:5:0:0/1:43 | |
| 5834 chr10 73061128 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5835 chr10 73069500 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5836 chr10 73073343 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 5837 chr10 73100637 . G C 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,42:2:0:0/1:35 | |
| 5838 chr10 73104056 . A G 93.8 . DP=32;AF1=1;CI95=0.5,1;DP4=0,1,1,14;MQ=47;PV4=1,0.0074,1,0.47 PL:DP:SP:GT:GQ 126,10,0:16:0:1/1:60 | |
| 5839 chr10 73105114 . T TGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5840 chr10 73108961 . TAG TAGCCGTAAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5841 chr10 73110758 . T A 6.98 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 5842 chr10 73111643 . A C 11.1 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=48 PL:DP:SP:GT:GQ 42,6,0:2:0:1/1:49 | |
| 5843 chr10 73112641 . CT CTT 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 5844 chr10 73115038 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 5845 chr10 73121913 . A G 99 . DP=40;AF1=1;CI95=1,1;DP4=1,1,13,21;MQ=43;PV4=1,1,0.0024,1 PL:DP:SP:GT:GQ 255,63,0:36:0:1/1:99 | |
| 5846 chr10 73125390 . C T 13.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 5847 chr10 73133514 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5848 chr10 73133632 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5849 chr10 73146284 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5850 chr10 73166705 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5851 chr10 73167816 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5852 chr10 73178048 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 5853 chr10 73192153 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 5854 chr10 73201437 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5855 chr10 73226836 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5856 chr10 73231303 . CCAG CCAGATTGCAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5857 chr10 73240659 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5858 chr10 73246023 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5859 chr10 73275748 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 5860 chr10 73279076 . CT CTGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5861 chr10 73281515 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5862 chr10 73283609 . gccccctc gc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5863 chr10 73284008 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5864 chr10 73295889 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5865 chr10 73298709 . A ATC 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 5866 chr10 73299455 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5867 chr10 73304048 . A T 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 5868 chr10 73304797 . G A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 5869 chr10 73315382 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5870 chr10 73317335 . ag aGTg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5871 chr10 73332162 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5872 chr10 73345380 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5873 chr10 73375668 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 5874 chr10 73375678 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5875 chr10 73395503 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5876 chr10 73418037 . G T 3.6 . DP=2;AF1=0.5127;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,13:2:0:0/1:16 | |
| 5877 chr10 73432831 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5878 chr10 73439283 . G GTTCTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5879 chr10 73439427 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 5880 chr10 73458169 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5881 chr10 73462653 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5882 chr10 73467534 . C CCCGGTG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 5883 chr10 73467663 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5884 chr10 73479659 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 5885 chr10 73503599 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5886 chr10 73512764 . GGACAGACAGACAGA GGACAGACAGA 12.7 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5887 chr10 73520632 . A C 99 . DP=11;AF1=1;CI95=1,1;DP4=0,0,3,6;MQ=48 PL:DP:SP:GT:GQ 137,27,0:9:0:1/1:99 | |
| 5888 chr10 73520960 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5889 chr10 73521578 . G A 38.5 . DP=14;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=48 PL:DP:SP:GT:GQ 71,12,0:4:0:1/1:72 | |
| 5890 chr10 73522060 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5891 chr10 73550648 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5892 chr10 73578704 . AAGTCTCAG AAG 99 . INDEL;DP=14;AF1=0.5;CI95=0.5,0.5;DP4=5,0,7,0;MQ=50;PV4=1,0.025,1,1 PL:DP:SP:GT:GQ 178,0,150:12:0:0/1:99 | |
| 5893 chr10 73578882 . T C 63 . DP=34;AF1=0.5;CI95=0.5,0.5;DP4=0,18,0,14;MQ=49;PV4=1,3.4e-21,0.00013,0.35 PL:DP:SP:GT:GQ 93,0,243:32:0:0/1:96 | |
| 5894 chr10 73579501 . AG AGGCGGG 7.35 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,40:2:0:0/1:42 | |
| 5895 chr10 73579979 . G A 99 . DP=31;AF1=0.5;CI95=0.5,0.5;DP4=15,0,13,0;MQ=47;PV4=1,0.01,1.2e-20,1 PL:DP:SP:GT:GQ 184,0,230:28:0:0/1:99 | |
| 5896 chr10 73592013 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 5897 chr10 73605853 . G C 6.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5898 chr10 73615673 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5899 chr10 73615680 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 5900 chr10 73619963 . t tTGTCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5901 chr10 73642207 . gt gTCTGTCCGCAt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5902 chr10 73648133 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5903 chr10 73697083 . tg tGTCATGTCg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5904 chr10 73714925 . aaga aa 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 5905 chr10 73718425 . a aT 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 5906 chr10 73722300 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5907 chr10 73728464 . G GTGA 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 5908 chr10 73735566 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5909 chr10 73739022 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5910 chr10 73755418 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 5911 chr10 73766434 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5912 chr10 73768534 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5913 chr10 73797648 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5914 chr10 73811730 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5915 chr10 73814784 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 5916 chr10 73816094 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5917 chr10 73816127 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5918 chr10 73820396 . G A 5.29 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=50 PL:DP:SP:GT:GQ 35,6,0:2:0:1/1:49 | |
| 5919 chr10 73820626 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5920 chr10 73823019 . A G 4.61 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=50 PL:DP:SP:GT:GQ 34,6,0:2:0:1/1:49 | |
| 5921 chr10 73827292 . A G 60.1 . DP=14;AF1=1;CI95=1,1;DP4=0,0,7,0;MQ=48 PL:DP:SP:GT:GQ 93,21,0:7:0:1/1:84 | |
| 5922 chr10 73836598 . ggc gGCgc 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 5923 chr10 73839307 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5924 chr10 73862032 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5925 chr10 73862714 . C T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 5926 chr10 73867035 . A ACTAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5927 chr10 73867208 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 5928 chr10 73869750 . C CTAGCTTCTG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5929 chr10 73887098 . T A 6.2 . DP=2;AF1=0.5003;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,28:2:0:0/1:30 | |
| 5930 chr10 73889013 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5931 chr10 73911952 . T C 8.65 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 5932 chr10 73916570 . TCAAA T 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 5933 chr10 73921162 . G A 99 . DP=10;AF1=0.5;CI95=0.5,0.5;DP4=4,0,5,1;MQ=47;PV4=1,0.29,0.002,0.42 PL:DP:SP:GT:GQ 157,0,113:10:0:0/1:99 | |
| 5934 chr10 73923066 . gta gTAACAAta 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 5935 chr10 73950389 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 5936 chr10 73953351 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5937 chr10 73971873 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5938 chr10 73990224 . G A 20 . DP=34;AF1=0.5;CI95=0.5,0.5;DP4=0,14,1,6;MQ=50;PV4=0.33,0.00017,0.01,1 PL:DP:SP:GT:GQ 50,0,216:21:0:0/1:53 | |
| 5939 chr10 74005037 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5940 chr10 74011411 . AC ACTCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5941 chr10 74054406 . T G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 5942 chr10 74058377 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 5943 chr10 74091577 . C CCTAAA 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=49 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 5944 chr10 74095793 . G A 15.1 . DP=10;AF1=0.5001;CI95=0.5,0.5;DP4=0,1,0,4;MQ=50;PV4=1,0.00039,0.34,0.2 PL:DP:SP:GT:GQ 45,0,35:5:0:0/1:38 | |
| 5945 chr10 74097985 . G T 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5946 chr10 74109079 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 5947 chr10 74124166 . TTCTCT TTCTCTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5948 chr10 74133323 . a aACGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5949 chr10 74145904 . A C 16.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=46 PL:DP:SP:GT:GQ 48,6,0:2:0:1/1:49 | |
| 5950 chr10 74180067 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5951 chr10 74218000 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5952 chr10 74225916 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5953 chr10 74231210 . TC TCGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5954 chr10 74259637 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 5955 chr10 74271627 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 5956 chr10 74276877 . AG AGTGGCG 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 5957 chr10 74286690 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 5958 chr10 74297336 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5959 chr10 74325800 . tt tTGCAGTGAATGAt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5960 chr10 74353706 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5961 chr10 74384021 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5962 chr10 74398411 . C T 46.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=43 PL:DP:SP:GT:GQ 78,6,0:2:0:1/1:49 | |
| 5963 chr10 74425957 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5964 chr10 74430733 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 5965 chr10 74452577 . T TTTTCAATG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5966 chr10 74460706 . A T 6.98 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 5967 chr10 74484229 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 5968 chr10 74489666 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5969 chr10 74505560 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 5970 chr10 74516896 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 5971 chr10 74521598 . ca cAAAa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5972 chr10 74531154 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 5973 chr10 74533200 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5974 chr10 74534153 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 5975 chr10 74567016 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 5976 chr10 74614045 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5977 chr10 74634394 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 5978 chr10 74647229 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5979 chr10 74649564 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5980 chr10 74658571 . C T 8.64 . DP=20;AF1=0.5;CI95=0.5,0.5;DP4=4,3,0,3;MQ=49;PV4=0.2,0.041,2.4e-05,0.43 PL:DP:SP:GT:GQ 38,0,208:10:7:0/1:41 | |
| 5981 chr10 74690234 . A G 11.3 . DP=4;AF1=0.5;CI95=0.5,0.5;DP4=2,0,2,0;MQ=47;PV4=1,0.31,0.072,1 PL:DP:SP:GT:GQ 41,0,54:4:0:0/1:44 | |
| 5982 chr10 74703289 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5983 chr10 74718314 . ct cTTGt 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 5984 chr10 74738089 . tttgtt ttt 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 5985 chr10 74740282 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=46 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5986 chr10 74740617 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 5987 chr10 74801376 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5988 chr10 74804828 . A C 5.47 . DP=11;AF1=0.5012;CI95=0.5,0.5;DP4=0,2,0,3;MQ=48;PV4=1,1,0.13,0.069 PL:DP:SP:GT:GQ 34,0,23:5:0:0/1:26 | |
| 5989 chr10 74813116 . A G 19.1 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=0,2,3,1;MQ=46;PV4=0.4,0.025,0.12,1 PL:DP:SP:GT:GQ 49,0,53:6:4:0/1:51 | |
| 5990 chr10 74818893 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 5991 chr10 74825951 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 5992 chr10 74831390 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 5993 chr10 74834425 . TAA TAACCCAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5994 chr10 74844238 . ttgt tTGtgt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5995 chr10 74846403 . AA AACCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5996 chr10 74849908 . g gGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5997 chr10 74866405 . tca tCAATGCTCca 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 5998 chr10 74876890 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 5999 chr10 74899105 . T A 10.4 . DP=26;AF1=0.5;CI95=0.5,0.5;DP4=2,3,4,0;MQ=48;PV4=0.17,0.053,0.075,1 PL:DP:SP:GT:GQ 40,0,133:9:8:0/1:43 | |
| 6000 chr10 74900419 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 6001 chr10 74908021 . T C 31 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=8,0,4,1;MQ=49;PV4=0.38,6.6e-07,0.014,0.034 PL:DP:SP:GT:GQ 61,0,198:13:0:0/1:64 | |
| 6002 chr10 74960483 . G GCT 3.25 . INDEL;DP=6;AF1=0.5;CI95=0.5,0.5;DP4=1,2,0,1;MQ=50;PV4=1,0.41,1,0.24 PL:DP:SP:GT:GQ 38,0,130:4:0:0/1:41 | |
| 6003 chr10 74960562 . GACTT G 5.08 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=0,2,1,0;MQ=50;PV4=0.33,0.44,1,0.36 PL:DP:SP:GT:GQ 41,0,64:3:0:0/1:44 | |
| 6004 chr10 74970675 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 6005 chr10 74973675 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6006 chr10 74993723 . TGA TGAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6007 chr10 75006386 . A C 11.1 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 42,6,0:2:0:1/1:49 | |
| 6008 chr10 75033151 . TC TCCCCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6009 chr10 75036908 . A G 25.1 . DP=7;AF1=0.508;CI95=0.5,0.5;DP4=1,0,3,0;MQ=43;PV4=1,0.33,0.16,1 PL:DP:SP:GT:GQ 55,0,15:4:0:0/1:18 | |
| 6010 chr10 75071508 . ctg cTGtg 7.35 . INDEL;DP=2;AF1=0.5001;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,35:2:0:0/1:37 | |
| 6011 chr10 75072530 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6012 chr10 75101492 . C G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6013 chr10 75114991 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6014 chr10 75122614 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6015 chr10 75132105 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6016 chr10 75145184 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6017 chr10 75155796 . A G 5.46 . DP=3;AF1=0.4999;CI95=0.5,0.5;DP4=2,0,1,0;MQ=48;PV4=1,0.45,0,1 PL:DP:SP:GT:GQ 34,0,78:3:0:0/1:37 | |
| 6018 chr10 75186107 . C T 7.8 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=2,2,0,3;MQ=49;PV4=0.43,1,0.13,1 PL:DP:SP:GT:GQ 37,0,49:7:4:0/1:40 | |
| 6019 chr10 75187225 . A T 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 6020 chr10 75187500 . A T 15.1 . DP=26;AF1=0.5;CI95=0.5,0.5;DP4=1,7,4,0;MQ=49;PV4=0.01,0.002,0.0004,1 PL:DP:SP:GT:GQ 45,0,203:12:20:0/1:48 | |
| 6021 chr10 75187502 . G A 44 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=1,7,4,2;MQ=48;PV4=0.091,0.089,0.0045,1 PL:DP:SP:GT:GQ 74,0,144:14:10:0/1:77 | |
| 6022 chr10 75188987 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6023 chr10 75191611 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6024 chr10 75202065 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 6025 chr10 75209134 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6026 chr10 75221407 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6027 chr10 75228294 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6028 chr10 75233646 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6029 chr10 75260601 . T G 12 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=45 PL:DP:SP:GT:GQ 43,6,0:2:0:1/1:49 | |
| 6030 chr10 75260603 . A G 4.61 . DP=9;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=45 PL:DP:SP:GT:GQ 34,6,0:2:0:1/1:49 | |
| 6031 chr10 75303014 . aa aACATGACa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6032 chr10 75311818 . C T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 6033 chr10 75317061 . AA AAAACTCTAGTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6034 chr10 75327774 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6035 chr10 75339599 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6036 chr10 75340843 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 6037 chr10 75375459 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6038 chr10 75395098 . AGA AGATTCTCTGA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6039 chr10 75408157 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6040 chr10 75408627 . A AGG 3.25 . INDEL;DP=6;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,1;MQ=50;PV4=1,0.029,1,0.015 PL:DP:SP:GT:GQ 38,0,114:4:0:0/1:41 | |
| 6041 chr10 75418020 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 6042 chr10 75427707 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6043 chr10 75427947 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 6044 chr10 75476882 . A G 3.04 . DP=6;AF1=0.5048;CI95=0.5,0.5;DP4=1,0,2,0;MQ=49;PV4=1,0,0.23,1 PL:DP:SP:GT:GQ 30,0,17:3:0:0/1:20 | |
| 6045 chr10 75494638 . ACTCTCTCT ACTCTCTCTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6046 chr10 75504595 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6047 chr10 75519322 . T C 35 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=10,0,4,0;MQ=48;PV4=1,0.0016,1.6e-05,1 PL:DP:SP:GT:GQ 65,0,211:14:0:0/1:68 | |
| 6048 chr10 75526651 . T C 28 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=1,2,0,5;MQ=48;PV4=0.37,0.00095,1,1 PL:DP:SP:GT:GQ 58,0,77:8:0:0/1:61 | |
| 6049 chr10 75548517 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6050 chr10 75574848 . G C 15.1 . DP=8;AF1=0.5;CI95=0.5,0.5;DP4=0,2,2,0;MQ=48;PV4=0.33,0.16,0.065,1 PL:DP:SP:GT:GQ 45,0,68:4:5:0/1:48 | |
| 6051 chr10 75581358 . AC ACTTGC 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6052 chr10 75585711 . C CAGGGGTAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6053 chr10 75586435 . A ACG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6054 chr10 75599950 . CGAGAGAG CGAGAG 8.19 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 6055 chr10 75603431 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 6056 chr10 75607168 . T C 11.4 . DP=25;AF1=0.508;CI95=0.5,0.5;DP4=0,1,0,3;MQ=49;PV4=1,0.2,0.21,1 PL:DP:SP:GT:GQ 41,0,15:4:0:0/1:18 | |
| 6057 chr10 75607643 . C CT 44.4 . INDEL;DP=4;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=50 PL:DP:SP:GT:GQ 84,9,0:3:0:1/1:63 | |
| 6058 chr10 75607696 . CAA CA 99 . INDEL;DP=21;AF1=1;CI95=1,1;DP4=0,0,20,0;MQ=50 PL:DP:SP:GT:GQ 166,60,0:20:0:1/1:99 | |
| 6059 chr10 75625160 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6060 chr10 75626373 . T C 10.4 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6061 chr10 75633965 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6062 chr10 75634151 . G A 7.8 . DP=3;AF1=0.5003;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,28:2:0:0/1:30 | |
| 6063 chr10 75639552 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 6064 chr10 75646622 . G C 7.59 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 38,6,0:2:0:1/1:49 | |
| 6065 chr10 75658661 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6066 chr10 75669647 . CGTGTGTGTGTGTGTGTGT CGTGTGTGTGTGTGTGT 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 6067 chr10 75669825 . AT ATCGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6068 chr10 75670374 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6069 chr10 75673101 . T C 53.3 . DP=23;AF1=1;CI95=0.5,1;DP4=0,0,1,4;MQ=49 PL:DP:SP:GT:GQ 86,15,0:5:0:1/1:75 | |
| 6070 chr10 75673476 . A G 10.4 . DP=23;AF1=0.5;CI95=0.5,0.5;DP4=4,9,0,5;MQ=49;PV4=0.28,0.098,0.0002,0.029 PL:DP:SP:GT:GQ 40,0,235:18:6:0/1:43 | |
| 6071 chr10 75676875 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6072 chr10 75682256 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 6073 chr10 75684197 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6074 chr10 75684399 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 6075 chr10 75707828 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6076 chr10 75716495 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6077 chr10 75723569 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6078 chr10 75728347 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 6079 chr10 75729910 . tg tGAGAGAg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6080 chr10 75743332 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6081 chr10 75771686 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 6082 chr10 75771959 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6083 chr10 75791101 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6084 chr10 75821473 . ttt tTTGCAtt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6085 chr10 75824891 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6086 chr10 75826677 . tgg tGGAAgg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6087 chr10 75830527 . G A 5.46 . DP=39;AF1=0.4999;CI95=0.5,0.5;DP4=4,12,1,5;MQ=49;PV4=1,7.4e-06,0.012,0.1 PL:DP:SP:GT:GQ 34,0,255:22:0:0/1:37 | |
| 6088 chr10 75834646 . T C 99 . DP=41;AF1=0.5;CI95=0.5,0.5;DP4=13,14,8,6;MQ=49;PV4=0.74,9.6e-09,2.9e-10,1 PL:DP:SP:GT:GQ 161,0,255:41:1:0/1:99 | |
| 6089 chr10 75842152 . G A 74.3 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=46 PL:DP:SP:GT:GQ 107,15,0:5:0:1/1:75 | |
| 6090 chr10 75843100 . T A 31.1 . DP=15;AF1=0.9966;CI95=0.5,1;DP4=1,0,8,0;MQ=49;PV4=1,0.081,1,1 PL:DP:SP:GT:GQ 60,1,0:9:0:1/1:23 | |
| 6091 chr10 75846089 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6092 chr10 75848517 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6093 chr10 75853111 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6094 chr10 75857273 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6095 chr10 75858102 . C G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 6096 chr10 75860098 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6097 chr10 75863750 . C T 25 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=0,9,0,6;MQ=49;PV4=1,4.8e-05,0.0015,1 PL:DP:SP:GT:GQ 55,0,201:15:0:0/1:58 | |
| 6098 chr10 75864943 . A C 14.2 . DP=24;AF1=0.5;CI95=0.5,0.5;DP4=11,1,0,5;MQ=49;PV4=0.00097,7.4e-05,0.012,1 PL:DP:SP:GT:GQ 44,0,239:17:30:0/1:47 | |
| 6099 chr10 75873892 . C T 4.13 . DP=13;AF1=0.4998;CI95=0.5,0.5;DP4=5,0,4,0;MQ=50;PV4=1,8e-08,1,0.18 PL:DP:SP:GT:GQ 32,0,156:9:0:0/1:35 | |
| 6100 chr10 75874166 . cgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgtgtgtgtgt cgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgtgtgtgtgt 30.4 . INDEL;DP=11;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=35 PL:DP:SP:GT:GQ 70,9,0:3:0:1/1:63 | |
| 6101 chr10 75876957 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 6102 chr10 75888977 . AC ACGTC 18.5 . INDEL;DP=17;AF1=0.5;CI95=0.5,0.5;DP4=1,5,0,3;MQ=50;PV4=1,0.044,1,0.022 PL:DP:SP:GT:GQ 56,0,175:9:0:0/1:59 | |
| 6103 chr10 75888979 . A G 64 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=1,5,0,4;MQ=48;PV4=1,0.083,3.2e-05,1 PL:DP:SP:GT:GQ 94,0,181:10:0:0/1:97 | |
| 6104 chr10 75892413 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6105 chr10 75892435 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6106 chr10 75920410 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6107 chr10 75922627 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 6108 chr10 75946545 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6109 chr10 75967323 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6110 chr10 75990429 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 6111 chr10 75996058 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6112 chr10 75996060 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6113 chr10 75998100 . C T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 6114 chr10 76002247 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6115 chr10 76027855 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6116 chr10 76045620 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6117 chr10 76063949 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 6118 chr10 76067361 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6119 chr10 76082324 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6120 chr10 76101246 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6121 chr10 76125046 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 6122 chr10 76152361 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6123 chr10 76154303 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6124 chr10 76221258 . T G 6.98 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,44:2:0:0/1:38 | |
| 6125 chr10 76224820 . G T 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 6126 chr10 76239550 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 6127 chr10 76248525 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6128 chr10 76257260 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 6129 chr10 76261388 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6130 chr10 76271196 . G T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 6131 chr10 76272712 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 6132 chr10 76297580 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6133 chr10 76308407 . AC ACGGATGC 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 6134 chr10 76314069 . A G 24.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=46 PL:DP:SP:GT:GQ 56,6,0:2:0:1/1:49 | |
| 6135 chr10 76319909 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 6136 chr10 76323150 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6137 chr10 76334349 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6138 chr10 76376269 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6139 chr10 76380109 . g gTATC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6140 chr10 76429870 . T C 7.8 . DP=8;AF1=0.5;CI95=0.5,0.5;DP4=5,0,2,0;MQ=49;PV4=1,0.0005,0.0026,0.29 PL:DP:SP:GT:GQ 37,0,160:7:0:0/1:40 | |
| 6141 chr10 76449180 . A G 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6142 chr10 76449601 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6143 chr10 76467199 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6144 chr10 76503200 . TCA TCAACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6145 chr10 76513110 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6146 chr10 76525529 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6147 chr10 76578297 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6148 chr10 76579756 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6149 chr10 76586734 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6150 chr10 76610509 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6151 chr10 76650528 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6152 chr10 76652843 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6153 chr10 76669179 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6154 chr10 76681421 . G GT 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 6155 chr10 76707739 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 6156 chr10 76712048 . ag aGg 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6157 chr10 76729901 . T A 6.98 . DP=10;AF1=0.4999;CI95=0.5,0.5;DP4=0,3,0,3;MQ=47;PV4=1,0.23,0.41,1 PL:DP:SP:GT:GQ 36,0,50:6:0:0/1:39 | |
| 6158 chr10 76730260 . A G 3.55 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6159 chr10 76745597 . G C 6.98 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 6160 chr10 76757457 . gtg gTGACtg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6161 chr10 76774678 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6162 chr10 76784386 . GAG GAGTGAGAAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6163 chr10 76787128 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6164 chr10 76817498 . CT CTGAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6165 chr10 76843879 . TCC TCCTGACAGCCC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 6166 chr10 76849215 . A G 23 . DP=47;AF1=0.5;CI95=0.5,0.5;DP4=9,21,10,6;MQ=21;PV4=0.058,1.5e-15,0.37,1 PL:DP:SP:GT:GQ 53,0,174:46:12:0/1:56 | |
| 6167 chr10 76854564 . C T 50 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=3,4,3,2;MQ=49;PV4=1,9.5e-05,0.038,1 PL:DP:SP:GT:GQ 80,0,242:12:0:0/1:83 | |
| 6168 chr10 76855326 . A G 3.54 . DP=15;AF1=0.4998;CI95=0.5,0.5;DP4=6,0,2,1;MQ=49;PV4=0.33,5.3e-08,0.085,0.39 PL:DP:SP:GT:GQ 31,0,176:9:0:0/1:34 | |
| 6169 chr10 76855412 . G A 99 . DP=56;AF1=0.5;CI95=0.5,0.5;DP4=10,27,4,11;MQ=48;PV4=1,1.3e-07,5.9e-28,0.41 PL:DP:SP:GT:GQ 232,0,255:52:0:0/1:99 | |
| 6170 chr10 76857716 . A G 39 . DP=5;AF1=0.5001;CI95=0.5,0.5;DP4=0,2,0,3;MQ=46;PV4=1,1,0.077,0.22 PL:DP:SP:GT:GQ 69,0,35:5:0:0/1:38 | |
| 6171 chr10 76873598 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 6172 chr10 76890912 . ca cACTa 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 6173 chr10 76896825 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6174 chr10 76919952 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6175 chr10 76936123 . T C 4.13 . DP=4;AF1=0.4998;CI95=0.5,0.5;DP4=0,2,0,1;MQ=48;PV4=1,0,0,1 PL:DP:SP:GT:GQ 32,0,83:3:0:0/1:35 | |
| 6176 chr10 76936540 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6177 chr10 76940717 . C CCCTGTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6178 chr10 76944947 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6179 chr10 76956238 . TAC TACTCAC 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6180 chr10 76966075 . ag aGCTGTGGTg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6181 chr10 76980514 . A C 6.98 . DP=11;AF1=0.5;CI95=0.5,0.5;DP4=3,0,3,0;MQ=49;PV4=1,0.46,0.41,0.17 PL:DP:SP:GT:GQ 36,0,36:6:0:0/1:36 | |
| 6182 chr10 76990646 . G A 51 . DP=13;AF1=0.5;CI95=0.5,0.5;DP4=5,0,6,0;MQ=48;PV4=1,0.0038,0.035,1 PL:DP:SP:GT:GQ 81,0,132:11:0:0/1:84 | |
| 6183 chr10 76992222 . GG GGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6184 chr10 77004604 . GGC GGCGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6185 chr10 77016000 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6186 chr10 77019270 . ctg c 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 6187 chr10 77032355 . C T 15.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 47,6,0:2:0:1/1:49 | |
| 6188 chr10 77044500 . G GCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6189 chr10 77054285 . tc tCCTAc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6190 chr10 77090177 . gaat g 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 6191 chr10 77102888 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6192 chr10 77112173 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6193 chr10 77156232 . GC GCGAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6194 chr10 77165972 . A C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6195 chr10 77169419 . GG GGCCAAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6196 chr10 77174250 . T C 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 6197 chr10 77187777 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6198 chr10 77218394 . G C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6199 chr10 77252093 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 6200 chr10 77295015 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6201 chr10 77297230 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 6202 chr10 77312294 . G A 5.46 . DP=6;AF1=0.4999;CI95=0.5,0.5;DP4=2,0,0,2;MQ=49;PV4=0.33,0.32,0.12,1 PL:DP:SP:GT:GQ 34,0,51:4:5:0/1:37 | |
| 6203 chr10 77326895 . G GTGAACCTGACT 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=49 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 6204 chr10 77358141 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6205 chr10 77360930 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6206 chr10 77438290 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6207 chr10 77450511 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6208 chr10 77451794 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 6209 chr10 77454739 . A G 15.1 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=50 PL:DP:SP:GT:GQ 47,9,0:3:0:1/1:63 | |
| 6210 chr10 77454813 . T C 3.54 . DP=4;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,2;MQ=49;PV4=1,0,0,1 PL:DP:SP:GT:GQ 31,0,41:3:0:0/1:34 | |
| 6211 chr10 77504847 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 6212 chr10 77511138 . ggag gGAgag 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6213 chr10 77526048 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6214 chr10 77540935 . t tGAAAAGGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6215 chr10 77543088 . C A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 6216 chr10 77548424 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6217 chr10 77553475 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6218 chr10 77596127 . A ATAAAGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6219 chr10 77600671 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 6220 chr10 77610579 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6221 chr10 77636170 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6222 chr10 77644355 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 6223 chr10 77658269 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6224 chr10 77684910 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6225 chr10 77690292 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6226 chr10 77701795 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 6227 chr10 77706551 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6228 chr10 77735403 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6229 chr10 77748828 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6230 chr10 77753947 . G T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6231 chr10 77762492 . GTA GTAGTTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6232 chr10 77771673 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 6233 chr10 77782885 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6234 chr10 77797973 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6235 chr10 77798598 . a aGAGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6236 chr10 77802119 . G C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 6237 chr10 77803956 . G A 4.61 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47 PL:DP:SP:GT:GQ 34,6,0:2:0:1/1:49 | |
| 6238 chr10 77803987 . A G 9.31 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 6239 chr10 77808411 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6240 chr10 77814451 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6241 chr10 77817157 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6242 chr10 77818469 . C T 4.13 . DP=12;AF1=0.4998;CI95=0.5,0.5;DP4=0,6,0,3;MQ=48;PV4=1,0.13,0.19,0.39 PL:DP:SP:GT:GQ 32,0,107:9:0:0/1:35 | |
| 6243 chr10 77818474 . A G 25 . DP=12;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=47 PL:DP:SP:GT:GQ 57,9,0:3:0:1/1:63 | |
| 6244 chr10 77824256 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6245 chr10 77839334 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 6246 chr10 77860309 . TA TAAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6247 chr10 77905362 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6248 chr10 77932398 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6249 chr10 77934884 . a aGTCACG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6250 chr10 77938752 . A T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6251 chr10 77940858 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6252 chr10 77943221 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6253 chr10 77964414 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6254 chr10 77986580 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 6255 chr10 78028622 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 6256 chr10 78037371 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 6257 chr10 78041066 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 6258 chr10 78051292 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6259 chr10 78073979 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 6260 chr10 78105626 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6261 chr10 78105835 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6262 chr10 78118817 . A C 28.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=43 PL:DP:SP:GT:GQ 60,6,0:2:0:1/1:49 | |
| 6263 chr10 78118849 . G C 7.59 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 38,6,0:2:0:1/1:49 | |
| 6264 chr10 78122155 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6265 chr10 78132677 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 6266 chr10 78137827 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6267 chr10 78143713 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6268 chr10 78201542 . G T 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 6269 chr10 78212856 . AA AACCTGGTCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6270 chr10 78271627 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6271 chr10 78285577 . t tCCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6272 chr10 78318674 . ATGTTG ATGTTGTTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6273 chr10 78358761 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6274 chr10 78358790 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6275 chr10 78382920 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6276 chr10 78383467 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 6277 chr10 78384427 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 6278 chr10 78386862 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 6279 chr10 78389866 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6280 chr10 78393070 . aCA aCACCCCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6281 chr10 78394056 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6282 chr10 78408285 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6283 chr10 78476280 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6284 chr10 78482000 . c cAGATCGGGG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 6285 chr10 78494330 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 6286 chr10 78506505 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6287 chr10 78516000 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6288 chr10 78551016 . G A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 6289 chr10 78646880 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6290 chr10 78649399 . C T 99 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=0,9,0,7;MQ=47;PV4=1,1,5.6e-18,1 PL:DP:SP:GT:GQ 145,0,181:16:0:0/1:99 | |
| 6291 chr10 78658723 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6292 chr10 78676751 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6293 chr10 78684995 . CCAA C 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 6294 chr10 78685970 . CACTA C 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 6295 chr10 78701684 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6296 chr10 78703293 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6297 chr10 78705957 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 6298 chr10 78736691 . TGA T 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 6299 chr10 78736843 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6300 chr10 78741314 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6301 chr10 78761236 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6302 chr10 78772974 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 6303 chr10 78773327 . A T 4.13 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,33:2:0:0/1:32 | |
| 6304 chr10 78774997 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6305 chr10 78789519 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6306 chr10 78809933 . CA CAGA 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6307 chr10 78824668 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 6308 chr10 78834780 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 6309 chr10 78848131 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 6310 chr10 78848226 . GA GATGTGGTACGTGCACCA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6311 chr10 78854168 . CCACA C 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 6312 chr10 78854596 . ctata cta 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6313 chr10 78864355 . TGAG TGAGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6314 chr10 78867871 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6315 chr10 78868377 . A G 5.46 . DP=5;AF1=0.4999;CI95=0.5,0.5;DP4=0,2,0,2;MQ=49;PV4=1,0.16,0.048,1 PL:DP:SP:GT:GQ 34,0,62:4:0:0/1:37 | |
| 6316 chr10 78871578 . G GAGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6317 chr10 78878776 . G GCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6318 chr10 78881819 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6319 chr10 78905148 . A AGTG 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 6320 chr10 78939053 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6321 chr10 78952206 . TT TTCCTCCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6322 chr10 78974865 . c cGGTTGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6323 chr10 78978304 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6324 chr10 78998960 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 6325 chr10 79003892 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6326 chr10 79029349 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6327 chr10 79078468 . T A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 6328 chr10 79085058 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6329 chr10 79100750 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6330 chr10 79107551 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6331 chr10 79110481 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6332 chr10 79125285 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6333 chr10 79129654 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6334 chr10 79143505 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 6335 chr10 79151118 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6336 chr10 79152082 . g gTATCTC 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 6337 chr10 79159048 . GAC G 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6338 chr10 79163945 . T TGTATG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6339 chr10 79170445 . C A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 6340 chr10 79175436 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6341 chr10 79192248 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6342 chr10 79201475 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 6343 chr10 79202484 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6344 chr10 79206643 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6345 chr10 79230275 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 6346 chr10 79232576 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6347 chr10 79232589 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6348 chr10 79242093 . A G 15.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=48 PL:DP:SP:GT:GQ 47,6,0:2:0:1/1:49 | |
| 6349 chr10 79242660 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6350 chr10 79256994 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6351 chr10 79276454 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 6352 chr10 79294856 . G A 6.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 6353 chr10 79296904 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6354 chr10 79304682 . tg tGg 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6355 chr10 79311031 . A AAAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6356 chr10 79312459 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6357 chr10 79317465 . c cTAGACGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6358 chr10 79344483 . G C 8.65 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6359 chr10 79354618 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6360 chr10 79355988 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 6361 chr10 79357323 . A G 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6362 chr10 79378260 . C T 4.77 . DP=3;AF1=0.4999;CI95=0.5,0.5;DP4=0,2,1,0;MQ=48;PV4=0.33,0,0,0.022 PL:DP:SP:GT:GQ 33,0,83:3:0:0/1:36 | |
| 6363 chr10 79394162 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6364 chr10 79404100 . T A 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6365 chr10 79430606 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6366 chr10 79430814 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6367 chr10 79450287 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6368 chr10 79455307 . a aGGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6369 chr10 79459224 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6370 chr10 79460204 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 6371 chr10 79467522 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6372 chr10 79476248 . ACGAGCC AC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6373 chr10 79477475 . GC GCGGTTTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6374 chr10 79492970 . C T 21 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=6,0,3,0;MQ=48;PV4=1,0.18,0.011,1 PL:DP:SP:GT:GQ 51,0,132:9:0:0/1:54 | |
| 6375 chr10 79493346 . A C 41 . DP=8;AF1=0.5;CI95=0.5,0.5;DP4=1,2,3,2;MQ=49;PV4=1,0.024,0.28,1 PL:DP:SP:GT:GQ 71,0,87:8:0:0/1:74 | |
| 6376 chr10 79493894 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 6377 chr10 79498309 . G C 3.01 . DP=6;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 6378 chr10 79539937 . G T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6379 chr10 79541428 . C T 26 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=48 PL:DP:SP:GT:GQ 58,9,0:3:0:1/1:63 | |
| 6380 chr10 79552151 . T C 59 . DP=15;AF1=1;CI95=1,1;DP4=0,0,10,0;MQ=50 PL:DP:SP:GT:GQ 92,30,0:10:0:1/1:99 | |
| 6381 chr10 79553673 . T C 26.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=42 PL:DP:SP:GT:GQ 58,6,0:2:0:1/1:49 | |
| 6382 chr10 79559191 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6383 chr10 79565655 . G A 29 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,5;MQ=48;PV4=1,0.00059,0.044,1 PL:DP:SP:GT:GQ 59,0,67:7:0:0/1:61 | |
| 6384 chr10 79566632 . G A 44 . DP=10;AF1=0.5;CI95=0.5,0.5;DP4=2,4,2,1;MQ=48;PV4=0.52,0.029,0.0033,1 PL:DP:SP:GT:GQ 74,0,209:9:3:0/1:77 | |
| 6385 chr10 79574103 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6386 chr10 79579251 . G A 16.1 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=1,8,2,3;MQ=50;PV4=0.51,2.7e-06,0.095,1 PL:DP:SP:GT:GQ 46,0,241:14:3:0/1:49 | |
| 6387 chr10 79580878 . TCGGC TC 3.25 . INDEL;DP=9;AF1=0.5;CI95=0.5,0.5;DP4=2,1,1,0;MQ=50;PV4=1,1,1,0.3 PL:DP:SP:GT:GQ 38,0,97:4:0:0/1:41 | |
| 6388 chr10 79580884 . G GCTTGAGC 7.35 . INDEL;DP=7;AF1=0.5001;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,32:2:0:0/1:35 | |
| 6389 chr10 79584178 . G C 97.3 . DP=36;AF1=1;CI95=0.5,1;DP4=0,1,2,8;MQ=48;PV4=1,1,0.13,1 PL:DP:SP:GT:GQ 130,15,0:11:0:1/1:75 | |
| 6390 chr10 79590685 . C T 29.3 . DP=12;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=49 PL:DP:SP:GT:GQ 62,15,0:5:0:1/1:75 | |
| 6391 chr10 79590729 . CT CTTTT 7.39 . INDEL;DP=2;AF1=0.5063;CI95=0.5,0.5;DP4=0,1,0,1;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,16:2:0:0/1:19 | |
| 6392 chr10 79592048 . T TTCTAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6393 chr10 79594722 . T C 3.03 . DP=2;AF1=0.5037;CI95=0.5,0.5;DP4=0,1,0,1;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,18:2:0:0/1:21 | |
| 6394 chr10 79600716 . A AC 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 6395 chr10 79604579 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 6396 chr10 79614189 . A G 24.8 . DP=30;AF1=0.6243;CI95=0.5,1;DP4=0,1,1,2;MQ=49;PV4=1,1,0.11,1 PL:DP:SP:GT:GQ 54,0,4:4:0:0/1:6 | |
| 6397 chr10 79616642 . C T 12.3 . DP=13;AF1=0.5;CI95=0.5,0.5;DP4=5,0,0,3;MQ=48;PV4=0.018,0.00046,0.0046,1 PL:DP:SP:GT:GQ 42,0,153:8:17:0/1:45 | |
| 6398 chr10 79626478 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 6399 chr10 79628875 . A G 27 . DP=15;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=48 PL:DP:SP:GT:GQ 59,9,0:3:0:1/1:63 | |
| 6400 chr10 79668132 . T TGGTGACA 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,0.42,1,1 PL:DP:SP:GT:GQ 41,0,56:3:0:0/1:44 | |
| 6401 chr10 79674266 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6402 chr10 79678679 . A ACCCTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6403 chr10 79689594 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 6404 chr10 79691389 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6405 chr10 79696944 . t tTAAG 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=1,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,91:3:0:0/1:44 | |
| 6406 chr10 79728629 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6407 chr10 79731012 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 6408 chr10 79737415 . C T 12.3 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,3;MQ=49;PV4=0.25,0.0078,0.33,1 PL:DP:SP:GT:GQ 42,0,38:4:0:0/1:40 | |
| 6409 chr10 79739867 . T C 4.77 . DP=16;AF1=0.4999;CI95=0.5,0.5;DP4=4,1,4,0;MQ=48;PV4=1,1,0.023,1 PL:DP:SP:GT:GQ 33,0,60:9:0:0/1:36 | |
| 6410 chr10 79739873 . G C 4.13 . DP=16;AF1=0.4998;CI95=0.5,0.5;DP4=2,2,4,0;MQ=49;PV4=0.43,2.7e-05,0.052,1 PL:DP:SP:GT:GQ 32,0,159:8:4:0/1:35 | |
| 6411 chr10 79742598 . T C 34 . DP=24;AF1=0.5;CI95=0.5,0.5;DP4=0,10,0,9;MQ=49;PV4=1,0.00043,0.21,1 PL:DP:SP:GT:GQ 64,0,191:19:0:0/1:67 | |
| 6412 chr10 79742617 . G T 19 . DP=10;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=49 PL:DP:SP:GT:GQ 51,9,0:3:0:1/1:63 | |
| 6413 chr10 79744556 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 6414 chr10 79762677 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6415 chr10 79762687 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6416 chr10 79769668 . T A 74 . DP=43;AF1=1;CI95=1,1;DP4=0,0,0,9;MQ=48 PL:DP:SP:GT:GQ 107,27,0:9:0:1/1:99 | |
| 6417 chr10 79782961 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 6418 chr10 79783797 . CA CATCTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6419 chr10 79784495 . A T 6.98 . DP=13;AF1=0.4999;CI95=0.5,0.5;DP4=0,4,0,3;MQ=49;PV4=1,0.11,0.00094,0.13 PL:DP:SP:GT:GQ 36,0,91:7:0:0/1:39 | |
| 6420 chr10 79786830 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 6421 chr10 79790861 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6422 chr10 79793688 . C T 99 . DP=68;AF1=1;CI95=1,1;DP4=0,1,8,9;MQ=49;PV4=1,0.053,0.29,1 PL:DP:SP:GT:GQ 155,27,0:18:0:1/1:99 | |
| 6423 chr10 79796937 . TCT TCTACT 5.08 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,1,1,0.43 PL:DP:SP:GT:GQ 41,0,78:3:0:0/1:44 | |
| 6424 chr10 79798155 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 6425 chr10 79799700 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6426 chr10 79817418 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 6427 chr10 79839608 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6428 chr10 79884516 . ag aGAGg 12.7 . INDEL;DP=4;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6429 chr10 79887058 . gg gGAg 7.69 . INDEL;DP=3;AF1=0.5554;CI95=0.5,1;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,7:2:0:0/1:10 | |
| 6430 chr10 79888519 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 6431 chr10 79898539 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 6432 chr10 79913600 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 6433 chr10 79916292 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6434 chr10 79920348 . G T 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 6435 chr10 79948897 . c cTCTATACCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6436 chr10 79958310 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6437 chr10 79963304 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 6438 chr10 79963669 . AC ACCTCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6439 chr10 79969755 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 6440 chr10 79987416 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6441 chr10 79999437 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6442 chr10 80017744 . tgt tGTGgt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6443 chr10 80020053 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6444 chr10 80021645 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6445 chr10 80024607 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6446 chr10 80030941 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 6447 chr10 80033640 . C G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 6448 chr10 80033927 . G GATA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6449 chr10 80048546 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6450 chr10 80056426 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6451 chr10 80058703 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6452 chr10 80081082 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 6453 chr10 80088546 . T A 26.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=46 PL:DP:SP:GT:GQ 58,6,0:2:0:1/1:49 | |
| 6454 chr10 80108599 . G GGTTCCCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6455 chr10 80116874 . TC TCGGC 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=1,1,1,0;MQ=50;PV4=1,0.17,1,0.23 PL:DP:SP:GT:GQ 41,0,91:3:0:0/1:44 | |
| 6456 chr10 80120752 . GTGCTG GTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6457 chr10 80128739 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6458 chr10 80130468 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6459 chr10 80135244 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 6460 chr10 80135797 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 6461 chr10 80150803 . gaggcttagtaggcttagtag gaggcttagtag 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6462 chr10 80168855 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6463 chr10 80176097 . C CCCCGTCAAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6464 chr10 80180697 . T G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6465 chr10 80205571 . ATCC A 7.37 . INDEL;DP=2;AF1=0.5025;CI95=0.5,0.5;DP4=0,1,0,1;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,20:2:0:0/1:23 | |
| 6466 chr10 80208412 . A G 4.13 . DP=2;AF1=0.5001;CI95=0.5,0.5;DP4=1,0,0,1;MQ=48;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,30:2:0:0/1:31 | |
| 6467 chr10 80232407 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6468 chr10 80235389 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 6469 chr10 80244657 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 6470 chr10 80266092 . C T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 6471 chr10 80270565 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6472 chr10 80274306 . T TGTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6473 chr10 80274632 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6474 chr10 80278086 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 6475 chr10 80282881 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 6476 chr10 80304388 . cc cCGAc 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 6477 chr10 80308766 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6478 chr10 80315714 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6479 chr10 80335346 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6480 chr10 80341612 . T C 3.41 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 32,6,0:2:0:1/1:49 | |
| 6481 chr10 80343197 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6482 chr10 80364844 . A T 11.1 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 42,6,0:2:0:1/1:49 | |
| 6483 chr10 80364929 . G A 8.65 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6484 chr10 80374679 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6485 chr10 80376809 . c cT 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6486 chr10 80396896 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 6487 chr10 80401211 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6488 chr10 80405767 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6489 chr10 80407736 . G T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 6490 chr10 80418144 . CATGGA CA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6491 chr10 80448713 . T A 5.46 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6492 chr10 80451837 . A ATC 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 6493 chr10 80452462 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6494 chr10 80467228 . CA CAGTGA 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6495 chr10 80485225 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 6496 chr10 80487167 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6497 chr10 80487798 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6498 chr10 80492774 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 6499 chr10 80493197 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6500 chr10 80509228 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6501 chr10 80512508 . GCTC GCTCTC 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 6502 chr10 80517770 . G A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6503 chr10 80523741 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=46 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6504 chr10 80549296 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6505 chr10 80554747 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6506 chr10 80563310 . CC CCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6507 chr10 80589895 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6508 chr10 80596893 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6509 chr10 80608820 . G T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 6510 chr10 80609249 . AG AGTTCG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6511 chr10 80611362 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6512 chr10 80621338 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 6513 chr10 80625825 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6514 chr10 80626660 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6515 chr10 80651069 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6516 chr10 80677419 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6517 chr10 80683234 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6518 chr10 80690773 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6519 chr10 80690965 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6520 chr10 80697140 . C A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 6521 chr10 80773779 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6522 chr10 80774028 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6523 chr10 80778504 . C CCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6524 chr10 80778580 . A T 6.2 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,42:2:0:0/1:37 | |
| 6525 chr10 80805795 . T C 47 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,1,2;MQ=46 PL:DP:SP:GT:GQ 79,9,0:3:0:1/1:63 | |
| 6526 chr10 80807120 . G GATTGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6527 chr10 80810059 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6528 chr10 80810817 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 6529 chr10 80832348 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6530 chr10 80837059 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6531 chr10 80839037 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6532 chr10 80842319 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6533 chr10 80854674 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6534 chr10 80855312 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6535 chr10 80860044 . at aTCTGt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6536 chr10 80874332 . C A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6537 chr10 80875591 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6538 chr10 80883616 . AGGG AG 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 6539 chr10 80886275 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6540 chr10 80888372 . CAA CAAA 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6541 chr10 80895675 . CCGC CC 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6542 chr10 80904991 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 6543 chr10 80922202 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6544 chr10 80931311 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6545 chr10 80931501 . tgta tGTACgta 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6546 chr10 80935083 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6547 chr10 80947700 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6548 chr10 80956583 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6549 chr10 80959683 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6550 chr10 80959924 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6551 chr10 80963450 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6552 chr10 80964962 . C CGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6553 chr10 80966096 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6554 chr10 80972580 . ttga tTGAtga 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6555 chr10 80975695 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6556 chr10 80979168 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6557 chr10 80981792 . G GGAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6558 chr10 80993661 . C T 7.83 . DP=2;AF1=0.505;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,17:2:0:0/1:20 | |
| 6559 chr10 80998407 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6560 chr10 81000931 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6561 chr10 81003065 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6562 chr10 81009677 . ca cAAAGAGCGCTa 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 6563 chr10 81046332 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6564 chr10 81053475 . G A 39 . DP=23;AF1=0.5;CI95=0.5,0.5;DP4=0,12,0,8;MQ=49;PV4=1,1.6e-06,3e-05,0.46 PL:DP:SP:GT:GQ 69,0,222:20:0:0/1:72 | |
| 6565 chr10 81058727 . G T 6.79 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 37,6,0:2:0:1/1:49 | |
| 6566 chr10 81059704 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6567 chr10 81060474 . T C 7.59 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 38,6,0:2:0:1/1:49 | |
| 6568 chr10 81061494 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6569 chr10 81063632 . CC CCGGTGGC 7.35 . INDEL;DP=2;AF1=0.5002;CI95=0.5,0.5;DP4=1,0,0,1;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,30:2:0:0/1:33 | |
| 6570 chr10 81066603 . CA CAAGGGAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6571 chr10 81070917 . CG CGTG 7.35 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,42:2:0:0/1:43 | |
| 6572 chr10 81073254 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6573 chr10 81082129 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 6574 chr10 81083165 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 6575 chr10 81085925 . c cCCATA 12.7 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6576 chr10 81096690 . G T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 6577 chr10 81110320 . CGA C 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 6578 chr10 81111199 . G A 49 . DP=8;AF1=0.504;CI95=0.5,0.5;DP4=1,0,5,0;MQ=48;PV4=1,0.2,0.25,1 PL:DP:SP:GT:GQ 79,0,18:6:0:0/1:21 | |
| 6579 chr10 81130271 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6580 chr10 81136931 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6581 chr10 81137492 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 6582 chr10 81144951 . T G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 6583 chr10 81145557 . C T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 6584 chr10 81145947 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6585 chr10 81150882 . T G 4.77 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6586 chr10 81160465 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6587 chr10 81169771 . G C 4.77 . DP=2;AF1=0.5003;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,28:2:0:0/1:30 | |
| 6588 chr10 81172704 . C A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6589 chr10 81174821 . T A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 6590 chr10 81184824 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6591 chr10 81200299 . ATCT ATCTCTTACTTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6592 chr10 81217400 . CA CAATA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6593 chr10 81219488 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 6594 chr10 81233483 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 6595 chr10 81235061 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 6596 chr10 81246624 . T TAGA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 6597 chr10 81252259 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6598 chr10 81252801 . CAG CAGGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6599 chr10 81261940 . aa aAGTTGa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6600 chr10 81267889 . A C 13 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 44,6,0:2:0:1/1:49 | |
| 6601 chr10 81274706 . G A 30.1 . DP=6;AF1=0.505;CI95=0.5,0.5;DP4=1,0,3,0;MQ=44;PV4=1,0.47,0.23,1 PL:DP:SP:GT:GQ 60,0,17:4:0:0/1:20 | |
| 6602 chr10 81274984 . A C 31.5 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=48 PL:DP:SP:GT:GQ 64,12,0:4:0:1/1:72 | |
| 6603 chr10 81275018 . G C 6.2 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 6604 chr10 81303544 . C A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 6605 chr10 81304066 . C A 3.01 . DP=3;AF1=0.4997;CI95=0.5,0.5;DP4=0,2,0,1;MQ=47;PV4=1,1,0,1 PL:DP:SP:GT:GQ 30,0,64:3:0:0/1:33 | |
| 6606 chr10 81316944 . G C 3.54 . DP=7;AF1=0.5001;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,29:2:0:0/1:30 | |
| 6607 chr10 81318820 . G A 30 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=0,7,0,5;MQ=49;PV4=1,0.034,0.00085,1 PL:DP:SP:GT:GQ 60,0,141:12:0:0/1:63 | |
| 6608 chr10 81319267 . C T 18.1 . DP=5;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,3;MQ=48;PV4=1,0.36,0.12,0.41 PL:DP:SP:GT:GQ 48,0,37:5:0:0/1:40 | |
| 6609 chr10 81319842 . T C 4.13 . DP=3;AF1=0.4998;CI95=0.5,0.5;DP4=2,0,1,0;MQ=48;PV4=1,0.26,0,1 PL:DP:SP:GT:GQ 32,0,79:3:0:0/1:35 | |
| 6610 chr10 81326834 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6611 chr10 81371554 . T A 21 . DP=7;AF1=0.5;CI95=0.5,0.5;DP4=4,0,3,0;MQ=48;PV4=1,0.25,0.0056,1 PL:DP:SP:GT:GQ 51,0,80:7:0:0/1:54 | |
| 6612 chr10 81373792 . T C 4.77 . DP=4;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,38:2:0:0/1:35 | |
| 6613 chr10 81373961 . C CGACG 7.35 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 6614 chr10 81407908 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 6615 chr10 81435013 . tcttca t 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6616 chr10 81445143 . A AAGCC 7.36 . INDEL;DP=3;AF1=0.501;CI95=0.5,0.5;DP4=1,0,0,1;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,24:2:0:0/1:27 | |
| 6617 chr10 81464331 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6618 chr10 81597775 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6619 chr10 81629636 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6620 chr10 81634371 . CAGGG CAGGGAAGGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6621 chr10 81652266 . G A 35 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=1,4,1,3;MQ=49;PV4=1,0.034,0.2,1 PL:DP:SP:GT:GQ 65,0,142:9:0:0/1:68 | |
| 6622 chr10 81680240 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6623 chr10 81686508 . ATAT ATATTTAT 7.35 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 6624 chr10 81697999 . AAGTCAG AAG 99 . INDEL;DP=28;AF1=0.5;CI95=0.5,0.5;DP4=2,17,0,7;MQ=50;PV4=1,0.0071,1,0.36 PL:DP:SP:GT:GQ 150,0,255:26:0:0/1:99 | |
| 6625 chr10 81699147 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 6626 chr10 81699968 . TGG T 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 6627 chr10 81700570 . A G 3.01 . DP=8;AF1=0.4997;CI95=0.5,0.5;DP4=0,3,0,2;MQ=47;PV4=1,0.16,0.32,1 PL:DP:SP:GT:GQ 30,0,82:5:0:0/1:33 | |
| 6628 chr10 81701722 . T C 99 . DP=41;AF1=1;CI95=1,1;DP4=0,1,3,26;MQ=46;PV4=1,1,0.15,1 PL:DP:SP:GT:GQ 230,64,0:30:0:1/1:99 | |
| 6629 chr10 81713502 . c cAGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6630 chr10 81737268 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6631 chr10 81741034 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6632 chr10 81764655 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6633 chr10 81769185 . G C 5.46 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6634 chr10 81777283 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 6635 chr10 81839429 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6636 chr10 81841870 . T C 10.4 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=5,0,4,0;MQ=48;PV4=1,1,0.045,1 PL:DP:SP:GT:GQ 40,0,64:9:0:0/1:43 | |
| 6637 chr10 81866340 . T A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 6638 chr10 81885718 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6639 chr10 81918206 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6640 chr10 81919800 . T C 17.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=44 PL:DP:SP:GT:GQ 49,6,0:2:0:1/1:49 | |
| 6641 chr10 81923046 . CAAGAA CAGAAGAA 7.37 . INDEL;DP=8;AF1=0.5025;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,20:2:0:0/1:23 | |
| 6642 chr10 81923205 . T G 15.4 . DP=18;AF1=0.5336;CI95=0.5,1;DP4=0,1,0,4;MQ=48;PV4=1,0.26,0.25,1 PL:DP:SP:GT:GQ 45,0,9:5:0:0/1:12 | |
| 6643 chr10 81936665 . G A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 6644 chr10 81937905 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6645 chr10 81952211 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6646 chr10 81963745 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6647 chr10 81975098 . a aATGTAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6648 chr10 81975913 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6649 chr10 81977253 . a aCGACTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6650 chr10 81977593 . C G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6651 chr10 81979009 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6652 chr10 81979163 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6653 chr10 81992624 . T A 9.53 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 6654 chr10 82005125 . C A 9.31 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 6655 chr10 82005162 . C T 8.44 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 39,6,0:2:0:1/1:49 | |
| 6656 chr10 82009142 . C T 24.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=46 PL:DP:SP:GT:GQ 56,6,0:2:0:1/1:49 | |
| 6657 chr10 82009354 . G C 13 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 44,6,0:2:0:1/1:49 | |
| 6658 chr10 82009439 . C G 3.02 . DP=4;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6659 chr10 82010539 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6660 chr10 82015342 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6661 chr10 82024282 . A AAGT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 6662 chr10 82040052 . A G 21 . DP=18;AF1=1;CI95=0.5,1;DP4=0,0,1,2;MQ=49 PL:DP:SP:GT:GQ 53,9,0:3:0:1/1:63 | |
| 6663 chr10 82040183 . A G 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=46 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6664 chr10 82043576 . G A 99 . DP=22;AF1=1;CI95=1,1;DP4=0,0,20,0;MQ=45 PL:DP:SP:GT:GQ 160,60,0:20:0:1/1:99 | |
| 6665 chr10 82045354 . G C 46.2 . DP=14;AF1=1;CI95=0.5,1;DP4=0,1,0,9;MQ=49;PV4=1,0.34,0.32,1 PL:DP:SP:GT:GQ 78,8,0:10:0:1/1:56 | |
| 6666 chr10 82046150 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6667 chr10 82046917 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6668 chr10 82053979 . CC CCCGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6669 chr10 82110189 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6670 chr10 82110754 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6671 chr10 82114469 . G A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 6672 chr10 82121301 . t tTCA 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 6673 chr10 82121606 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 6674 chr10 82122880 . C CACACA 99 . INDEL;DP=21;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,15;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 223,0,39:17:0:0/1:42 | |
| 6675 chr10 82131139 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6676 chr10 82145836 . a aTTACC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6677 chr10 82152291 . T A 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6678 chr10 82162768 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6679 chr10 82172405 . t tTAAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6680 chr10 82182296 . G A 18.5 . DP=30;AF1=0.8277;CI95=0.5,1;DP4=0,1,0,5;MQ=49;PV4=1,0.38,0.26,1 PL:DP:SP:GT:GQ 47,0,1:6:0:1/1:5 | |
| 6681 chr10 82191643 . A G 21.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=46 PL:DP:SP:GT:GQ 53,6,0:2:0:1/1:49 | |
| 6682 chr10 82206440 . ttct tTCTGtct 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6683 chr10 82222196 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6684 chr10 82225070 . CAG CAGTAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6685 chr10 82230230 . A AGATCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6686 chr10 82257671 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6687 chr10 82269930 . TTGATCTG TTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6688 chr10 82273779 . A C 4.39 . DP=9;AF1=0.5553;CI95=0.5,1;DP4=1,0,0,2;MQ=49;PV4=0.33,1,0.17,1 PL:DP:SP:GT:GQ 32,0,7:3:0:0/1:10 | |
| 6689 chr10 82273936 . C CAAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6690 chr10 82277725 . A T 11.3 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=48 PL:DP:SP:GT:GQ 43,9,0:3:0:1/1:63 | |
| 6691 chr10 82281012 . A T 6.2 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,44:2:0:0/1:37 | |
| 6692 chr10 82285781 . CCAC CC 3.25 . INDEL;DP=2;AF1=0.501;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,24:2:0:0/1:27 | |
| 6693 chr10 82296864 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6694 chr10 82298147 . C A 3.02 . DP=4;AF1=0.5002;CI95=0.5,0.5;DP4=0,1,2,0;MQ=48;PV4=0.33,0,0.27,1 PL:DP:SP:GT:GQ 30,0,27:3:0:0/1:28 | |
| 6695 chr10 82305019 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6696 chr10 82313687 . G T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 6697 chr10 82317721 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6698 chr10 82329660 . G T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6699 chr10 82336995 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6700 chr10 82337004 . a aCG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6701 chr10 82338336 . G T 4.61 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=49 PL:DP:SP:GT:GQ 34,6,0:2:0:1/1:49 | |
| 6702 chr10 82363404 . A G 9.52 . DP=5;AF1=0.5;CI95=0.5,0.5;DP4=3,0,2,0;MQ=49;PV4=1,0.027,0.14,1 PL:DP:SP:GT:GQ 39,0,111:5:0:0/1:42 | |
| 6703 chr10 82363531 . GC GCTC 7.35 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 6704 chr10 82364338 . TGTC TGTCAACAAGTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6705 chr10 82366650 . a aCCTG 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 6706 chr10 82413859 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6707 chr10 82416053 . A C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 6708 chr10 82416802 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6709 chr10 82417967 . T A 9.52 . DP=5;AF1=0.5001;CI95=0.5,0.5;DP4=0,2,1,1;MQ=45;PV4=1,1,0.29,0.071 PL:DP:SP:GT:GQ 39,0,34:4:0:0/1:36 | |
| 6710 chr10 82417988 . a aCACTCC 12.7 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6711 chr10 82418237 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6712 chr10 82428156 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6713 chr10 82450620 . TC TCGC 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6714 chr10 82450662 . T C 7.8 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 6715 chr10 82454397 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6716 chr10 82455023 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 6717 chr10 82465233 . C CATA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6718 chr10 82476711 . G C 3.02 . DP=2;AF1=0.5005;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,25:2:0:0/1:27 | |
| 6719 chr10 82489893 . GTCT G 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 6720 chr10 82496727 . agt a 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=48 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 6721 chr10 82530026 . G T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 6722 chr10 82536627 . G A 4.13 . DP=16;AF1=0.4998;CI95=0.5,0.5;DP4=0,5,0,3;MQ=48;PV4=1,0.42,0.067,1 PL:DP:SP:GT:GQ 32,0,79:8:0:0/1:35 | |
| 6723 chr10 82536797 . AA AACGTGTCA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6724 chr10 82551253 . T G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6725 chr10 82559860 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6726 chr10 82569566 . ata aTAACTCta 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6727 chr10 82577394 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6728 chr10 82578289 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 6729 chr10 82580731 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6730 chr10 82587273 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6731 chr10 82612717 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6732 chr10 82639379 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 6733 chr10 82656352 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6734 chr10 82657621 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 6735 chr10 82661795 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6736 chr10 82674820 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6737 chr10 82675391 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6738 chr10 82678492 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6739 chr10 82695782 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6740 chr10 82702630 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 6741 chr10 82704895 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 6742 chr10 82708409 . A C 3.54 . DP=2;AF1=0.5001;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,30:2:0:0/1:30 | |
| 6743 chr10 82719556 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6744 chr10 82749846 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6745 chr10 82779437 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6746 chr10 82808984 . t tCAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6747 chr10 82821744 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6748 chr10 82822420 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6749 chr10 82823615 . t tACAC 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 6750 chr10 82826267 . aat a 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6751 chr10 82862653 . G C 4.77 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6752 chr10 82887084 . a aATT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6753 chr10 82907949 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 6754 chr10 82913962 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6755 chr10 82915820 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 6756 chr10 82924709 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 6757 chr10 82944669 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 6758 chr10 82944700 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6759 chr10 83007021 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6760 chr10 83013370 . GA GATGAGAGCCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6761 chr10 83040324 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6762 chr10 83045136 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6763 chr10 83054122 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 6764 chr10 83061066 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 6765 chr10 83106776 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6766 chr10 83119250 . T A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6767 chr10 83152190 . t tTC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 6768 chr10 83182966 . G C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 6769 chr10 83199138 . caa c 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6770 chr10 83240367 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6771 chr10 83259670 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6772 chr10 83261925 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 6773 chr10 83292338 . AA AAGAAAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6774 chr10 83297970 . G C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6775 chr10 83302152 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6776 chr10 83310338 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6777 chr10 83335796 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 6778 chr10 83341279 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 6779 chr10 83346403 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6780 chr10 83347475 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 6781 chr10 83356298 . at aTCTGt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6782 chr10 83373622 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6783 chr10 83387093 . T TATC 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 6784 chr10 83388352 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6785 chr10 83416228 . ta tAa 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6786 chr10 83419653 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6787 chr10 83421010 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 6788 chr10 83421547 . C A 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6789 chr10 83447234 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6790 chr10 83488658 . t tATCCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6791 chr10 83504336 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6792 chr10 83547862 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6793 chr10 83577430 . CT CTTGT 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6794 chr10 83594570 . G A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6795 chr10 83628044 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6796 chr10 83635474 . Gaccaccaccac Gaccac 69.5 . INDEL;DP=10;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,3;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 107,0,125:7:0:0/1:99 | |
| 6797 chr10 83637996 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6798 chr10 83639594 . G A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 6799 chr10 83664182 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6800 chr10 83673804 . CTT CTTACATT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6801 chr10 83701577 . gg gGTg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6802 chr10 83742625 . G A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6803 chr10 83748515 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6804 chr10 83749172 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6805 chr10 83755703 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6806 chr10 83794888 . G A 4.77 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6807 chr10 83794924 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6808 chr10 83800856 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6809 chr10 83813939 . A G 13.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 6810 chr10 83826895 . G T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 6811 chr10 83841843 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6812 chr10 83856350 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6813 chr10 83873131 . G A 6.02 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=50 PL:DP:SP:GT:GQ 36,6,0:2:0:1/1:49 | |
| 6814 chr10 83880962 . C CCCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6815 chr10 83882201 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 6816 chr10 83909496 . ATG ATGAGATTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6817 chr10 83917501 . TG TGGAGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6818 chr10 83920800 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6819 chr10 83927984 . C T 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6820 chr10 83961018 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6821 chr10 83963236 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6822 chr10 83965678 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6823 chr10 83995579 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6824 chr10 84000101 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6825 chr10 84000833 . CT CTTT 5.8 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 6826 chr10 84006132 . A G 5.46 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,44:2:0:0/1:37 | |
| 6827 chr10 84042755 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6828 chr10 84059504 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 6829 chr10 84062369 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6830 chr10 84068661 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6831 chr10 84073412 . CCCAG CCCAGACCACACCAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6832 chr10 84110207 . G T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 6833 chr10 84111320 . G T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6834 chr10 84113819 . A T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6835 chr10 84137645 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 6836 chr10 84153451 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6837 chr10 84166048 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6838 chr10 84172425 . t tCAGGGTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6839 chr10 84179523 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 6840 chr10 84190646 . G A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6841 chr10 84193166 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6842 chr10 84214915 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6843 chr10 84215070 . t tTC 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6844 chr10 84229814 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6845 chr10 84247725 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6846 chr10 84249974 . ct cTt 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6847 chr10 84258590 . ta tAGGTTCa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6848 chr10 84259905 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6849 chr10 84267107 . GG GGGTG 12.7 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6850 chr10 84282139 . C A 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 6851 chr10 84341259 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6852 chr10 84380762 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6853 chr10 84392119 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6854 chr10 84393323 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6855 chr10 84393447 . TG TGGG 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,1,1,0.33 PL:DP:SP:GT:GQ 41,0,81:3:0:0/1:44 | |
| 6856 chr10 84426519 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6857 chr10 84433833 . T A 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,1;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,43:2:0:0/1:34 | |
| 6858 chr10 84434857 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6859 chr10 84450628 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6860 chr10 84456249 . GG GGAGCTGAAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6861 chr10 84461827 . C G 8.33 . DP=3;AF1=0.5939;CI95=0.5,1;DP4=1,0,1,1;MQ=47;PV4=1,1,0.33,1 PL:DP:SP:GT:GQ 37,0,5:3:0:0/1:7 | |
| 6862 chr10 84491258 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6863 chr10 84506255 . T A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 6864 chr10 84509943 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 6865 chr10 84515974 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6866 chr10 84531197 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6867 chr10 84562523 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6868 chr10 84568700 . A G 12 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=49 PL:DP:SP:GT:GQ 43,6,0:2:0:1/1:49 | |
| 6869 chr10 84573656 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 6870 chr10 84600861 . G C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6871 chr10 84605134 . CCT C 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 6872 chr10 84621692 . TAGG T 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6873 chr10 84639906 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6874 chr10 84663795 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 6875 chr10 84665864 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6876 chr10 84674827 . t tGTCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6877 chr10 84682955 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6878 chr10 84694320 . TA TATCAGCGCA 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=49 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 6879 chr10 84694416 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6880 chr10 84726438 . G C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6881 chr10 84728735 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6882 chr10 84728978 . T A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 6883 chr10 84761835 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6884 chr10 84763645 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6885 chr10 84790625 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6886 chr10 84794425 . t tCTCAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6887 chr10 84820249 . c cGAGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6888 chr10 84841853 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6889 chr10 84848300 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6890 chr10 84914054 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 6891 chr10 84923926 . C A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6892 chr10 84954026 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6893 chr10 84962321 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6894 chr10 84979981 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6895 chr10 84995513 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6896 chr10 85000616 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 6897 chr10 85005287 . c cGGCCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6898 chr10 85012434 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 6899 chr10 85031740 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6900 chr10 85049926 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6901 chr10 85060009 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6902 chr10 85061594 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6903 chr10 85067241 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6904 chr10 85071369 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6905 chr10 85093736 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 6906 chr10 85097393 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6907 chr10 85106673 . C G 6.2 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,42:2:0:0/1:37 | |
| 6908 chr10 85122939 . TATAA T 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6909 chr10 85126425 . TGTT TGTTAGTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6910 chr10 85138752 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 6911 chr10 85139131 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6912 chr10 85141137 . T G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6913 chr10 85153857 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 6914 chr10 85158988 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 6915 chr10 85164454 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6916 chr10 85171877 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6917 chr10 85175469 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6918 chr10 85183390 . A G 7.8 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 6919 chr10 85223614 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6920 chr10 85243385 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 6921 chr10 85254063 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6922 chr10 85259401 . G C 22.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=46 PL:DP:SP:GT:GQ 54,6,0:2:0:1/1:49 | |
| 6923 chr10 85271102 . a aTGTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6924 chr10 85283290 . T TCGAGAG 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6925 chr10 85292761 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6926 chr10 85302203 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6927 chr10 85331405 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6928 chr10 85349290 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6929 chr10 85362780 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6930 chr10 85366144 . T C 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 6931 chr10 85367028 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 6932 chr10 85406555 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6933 chr10 85424851 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6934 chr10 85426704 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6935 chr10 85428066 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6936 chr10 85435261 . C CATCAAAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6937 chr10 85456644 . TTGT TT 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6938 chr10 85463283 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6939 chr10 85474272 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6940 chr10 85478721 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6941 chr10 85479110 . G A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 6942 chr10 85513135 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6943 chr10 85518760 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 6944 chr10 85569714 . C CTTCAA 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=1,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,91:3:0:0/1:44 | |
| 6945 chr10 85587102 . aacat a 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6946 chr10 85608934 . CAG CAGCAAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6947 chr10 85628885 . t tA 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6948 chr10 85630085 . G GT 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6949 chr10 85633444 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6950 chr10 85643847 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6951 chr10 85649721 . c cGGTGTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6952 chr10 85668009 . C G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 6953 chr10 85686455 . C G 14.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 6954 chr10 85688038 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6955 chr10 85700800 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6956 chr10 85712641 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 6957 chr10 85718830 . AG AGG 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6958 chr10 85738332 . A ACT 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 6959 chr10 85740255 . G GAAAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6960 chr10 85741361 . CCCAGCCAGCCAGC CCCAGCCAGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6961 chr10 85744503 . C G 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 6962 chr10 85759796 . T C 35.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=43 PL:DP:SP:GT:GQ 67,6,0:2:0:1/1:49 | |
| 6963 chr10 85789609 . ct cTTt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6964 chr10 85790955 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 6965 chr10 85793380 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 6966 chr10 85841472 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6967 chr10 85858439 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 6968 chr10 85860728 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6969 chr10 85861171 . tg tGGGAGAg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6970 chr10 85900038 . AA AAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 6971 chr10 85902394 . G C 42 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=10,0,7,0;MQ=49;PV4=1,3.8e-05,0.0042,1 PL:DP:SP:GT:GQ 72,0,208:17:0:0/1:75 | |
| 6972 chr10 85902497 . A T 7.8 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,3;MQ=48;PV4=1,1,1,0.42 PL:DP:SP:GT:GQ 37,0,36:6:0:0/1:36 | |
| 6973 chr10 85903908 . TTAA TTGTAA 5.8 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 6974 chr10 85910438 . A G 3.54 . DP=7;AF1=0.4999;CI95=0.5,0.5;DP4=2,0,3,0;MQ=47;PV4=1,0.1,0.36,1 PL:DP:SP:GT:GQ 31,0,37:5:0:0/1:33 | |
| 6975 chr10 85912073 . T A 23 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=6,0,1,3;MQ=49;PV4=0.033,0.026,0.0081,0.06 PL:DP:SP:GT:GQ 53,0,144:10:15:0/1:56 | |
| 6976 chr10 85913214 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 6977 chr10 85915462 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 6978 chr10 85918900 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 6979 chr10 85931473 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 6980 chr10 85946310 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 6981 chr10 85950748 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 6982 chr10 85964443 . G T 24 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=0,10,0,6;MQ=49;PV4=1,8e-06,2.3e-05,1 PL:DP:SP:GT:GQ 54,0,209:16:0:0/1:57 | |
| 6983 chr10 85970714 . T C 3.01 . DP=5;AF1=0.4998;CI95=0.5,0.5;DP4=2,0,1,0;MQ=48;PV4=1,1,0,1 PL:DP:SP:GT:GQ 30,0,52:3:0:0/1:33 | |
| 6984 chr10 85972195 . A G 6.28 . DP=6;AF1=0.5128;CI95=0.5,0.5;DP4=0,1,0,2;MQ=47;PV4=1,1,0.3,0.47 PL:DP:SP:GT:GQ 35,0,13:3:0:0/1:16 | |
| 6985 chr10 85974381 . A G 84 . DP=34;AF1=1;CI95=1,1;DP4=0,0,0,31;MQ=49 PL:DP:SP:GT:GQ 117,93,0:31:0:1/1:99 | |
| 6986 chr10 85975759 . TC TCC 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6987 chr10 85984778 . A C 3.54 . DP=7;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,2,0;MQ=49;PV4=0.33,0.0076,0.17,1 PL:DP:SP:GT:GQ 31,0,41:3:0:0/1:34 | |
| 6988 chr10 85992511 . T C 99 . DP=16;AF1=1;CI95=1,1;DP4=0,0,9,6;MQ=46 PL:DP:SP:GT:GQ 255,45,0:15:0:1/1:99 | |
| 6989 chr10 85993763 . ATTT A 3.25 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=3,0,1,0;MQ=50;PV4=1,1,1,0.36 PL:DP:SP:GT:GQ 38,0,82:4:0:0/1:41 | |
| 6990 chr10 85993836 . A G 99 . DP=30;AF1=1;CI95=1,1;DP4=1,1,14,9;MQ=46;PV4=1,1,0.016,1 PL:DP:SP:GT:GQ 255,26,0:25:0:1/1:99 | |
| 6991 chr10 85994142 . A G,C 50.5 . DP=25;AF1=1;CI95=0.5,1;DP4=0,0,1,4;MQ=47 PL:DP:SP:GT:GQ 98,27,78,15,0,78:5:0:1/1:72 | |
| 6992 chr10 85999444 . T C 26.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=46 PL:DP:SP:GT:GQ 58,6,0:2:0:1/1:49 | |
| 6993 chr10 86001457 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 6994 chr10 86002140 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 6995 chr10 86004873 . T C 33 . DP=18;AF1=0.5008;CI95=0.5,0.5;DP4=1,0,2,3;MQ=49;PV4=1,0.0028,0.21,1 PL:DP:SP:GT:GQ 63,0,25:6:0:0/1:28 | |
| 6996 chr10 86012713 . C T 99 . DP=28;AF1=1;CI95=1,1;DP4=0,0,4,19;MQ=45 PL:DP:SP:GT:GQ 255,69,0:23:0:1/1:99 | |
| 6997 chr10 86027872 . A T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 6998 chr10 86049343 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 6999 chr10 86066202 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 7000 chr10 86081246 . tgt tGTGgt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7001 chr10 86122227 . G GCCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7002 chr10 86134254 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7003 chr10 86151676 . CA CAA 38.5 . INDEL;DP=9;AF1=0.5;CI95=0.5,0.5;DP4=0,3,3,1;MQ=50;PV4=0.14,0.16,1,0.24 PL:DP:SP:GT:GQ 76,0,64:7:8:0/1:67 | |
| 7004 chr10 86151819 . C A 11.3 . DP=4;AF1=0.5001;CI95=0.5,0.5;DP4=0,1,0,2;MQ=45;PV4=1,0.11,0.29,1 PL:DP:SP:GT:GQ 41,0,33:3:0:0/1:35 | |
| 7005 chr10 86185654 . T G 31.5 . DP=38;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=46 PL:DP:SP:GT:GQ 64,12,0:4:0:1/1:72 | |
| 7006 chr10 86247297 . tgt tGTGGgt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7007 chr10 86307890 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7008 chr10 86312764 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7009 chr10 86316455 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7010 chr10 86338423 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7011 chr10 86342374 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7012 chr10 86350276 . T A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 7013 chr10 86387236 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7014 chr10 86390815 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 7015 chr10 86418702 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7016 chr10 86435002 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7017 chr10 86456265 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 7018 chr10 86543293 . C A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 7019 chr10 86544145 . A G 15.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=48 PL:DP:SP:GT:GQ 47,6,0:2:0:1/1:49 | |
| 7020 chr10 86547451 . CA CATGA 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 7021 chr10 86549623 . GGGAG GG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7022 chr10 86549927 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7023 chr10 86549929 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7024 chr10 86550813 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=46 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7025 chr10 86553325 . A C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 7026 chr10 86578120 . A T 5.46 . DP=3;AF1=0.4999;CI95=0.5,0.5;DP4=1,1,0,1;MQ=47;PV4=1,1,0.05,1 PL:DP:SP:GT:GQ 34,0,63:3:0:0/1:37 | |
| 7027 chr10 86590933 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7028 chr10 86604091 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7029 chr10 86623331 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7030 chr10 86624827 . G C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 7031 chr10 86627400 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7032 chr10 86644537 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 7033 chr10 86698736 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 7034 chr10 86700842 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 7035 chr10 86709859 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 7036 chr10 86744491 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7037 chr10 86750438 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7038 chr10 86784359 . g gAAT 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 7039 chr10 86790565 . G C 5.46 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 7040 chr10 86803718 . gaa gAAaa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7041 chr10 86806469 . A ATGT 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7042 chr10 86813895 . TA TAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7043 chr10 86825558 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7044 chr10 86844113 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7045 chr10 86858747 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7046 chr10 86903483 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7047 chr10 86920622 . G T 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 7048 chr10 86925654 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 7049 chr10 86955823 . agtgtg agtg 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 7050 chr10 87059704 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 7051 chr10 87071842 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 7052 chr10 87081153 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 7053 chr10 87083874 . C CACGCGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7054 chr10 87090114 . ct cTTt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7055 chr10 87113988 . t tCATG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7056 chr10 87132905 . GCCCA G 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7057 chr10 87138796 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7058 chr10 87158409 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7059 chr10 87159281 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7060 chr10 87174780 . g gACA 3.81 . INDEL;DP=9;AF1=0.5005;CI95=0.5,0.5;DP4=1,1,1,0;MQ=32;PV4=1,1,1,0.14 PL:DP:SP:GT:GQ 39,0,27:3:0:0/1:30 | |
| 7061 chr10 87184177 . TT TTGCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7062 chr10 87184614 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7063 chr10 87192525 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 7064 chr10 87195326 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7065 chr10 87216263 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7066 chr10 87253906 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7067 chr10 87262755 . T A 10.2 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=25 PL:DP:SP:GT:GQ 41,6,0:2:0:1/1:49 | |
| 7068 chr10 87263482 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7069 chr10 87271868 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 7070 chr10 87273362 . CATA CA 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 7071 chr10 87286094 . AGC AGCGCAAGCGC 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 7072 chr10 87300091 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7073 chr10 87309327 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 7074 chr10 87315560 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7075 chr10 87328716 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7076 chr10 87339194 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7077 chr10 87339965 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7078 chr10 87347486 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7079 chr10 87362075 . G T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 7080 chr10 87373134 . GAAA GACAAA 5.08 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,1,1,0.018 PL:DP:SP:GT:GQ 41,0,55:3:0:0/1:44 | |
| 7081 chr10 87374962 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7082 chr10 87377963 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 7083 chr10 87378670 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7084 chr10 87379811 . T C 34 . DP=33;AF1=0.5;CI95=0.5,0.5;DP4=1,19,0,9;MQ=49;PV4=1,3.8e-07,5.4e-17,1 PL:DP:SP:GT:GQ 64,0,255:29:0:0/1:67 | |
| 7085 chr10 87381718 . C G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 7086 chr10 87387714 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7087 chr10 87398224 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7088 chr10 87408900 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7089 chr10 87418960 . ACC A 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 7090 chr10 87431323 . G T 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7091 chr10 87442523 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7092 chr10 87448637 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 7093 chr10 87453709 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7094 chr10 87455892 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7095 chr10 87462022 . aa aACACa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7096 chr10 87468733 . AGC AGCGGC 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7097 chr10 87476778 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7098 chr10 87482830 . T TCACCTAACCGGAGA 99 . INDEL;DP=24;AF1=1;CI95=1,1;DP4=0,0,8,10;MQ=50 PL:DP:SP:GT:GQ 255,54,0:18:0:1/1:99 | |
| 7099 chr10 87482991 . C T 4.77 . DP=5;AF1=0.4999;CI95=0.5,0.5;DP4=0,2,0,2;MQ=48;PV4=1,0.21,0.072,1 PL:DP:SP:GT:GQ 33,0,59:4:0:0/1:36 | |
| 7100 chr10 87489242 . C A 27 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=7,0,6,0;MQ=49;PV4=1,5.8e-11,5.2e-06,1 PL:DP:SP:GT:GQ 57,0,186:13:0:0/1:60 | |
| 7101 chr10 87540337 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 7102 chr10 87568887 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 7103 chr10 87572704 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 7104 chr10 87578113 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7105 chr10 87614175 . C T 4.13 . DP=9;AF1=0.4998;CI95=0.5,0.5;DP4=4,0,2,0;MQ=47;PV4=1,1,0.018,1 PL:DP:SP:GT:GQ 32,0,65:6:0:0/1:35 | |
| 7106 chr10 87620595 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 7107 chr10 87645159 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7108 chr10 87661397 . T C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 7109 chr10 87669515 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 7110 chr10 87671780 . CA CACCCACAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7111 chr10 87677444 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7112 chr10 87701234 . g gGGGGGACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7113 chr10 87701781 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7114 chr10 87762847 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7115 chr10 87784938 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7116 chr10 87799061 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 7117 chr10 87806587 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7118 chr10 87817493 . agt aGTgt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7119 chr10 87823612 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7120 chr10 87829586 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7121 chr10 87833146 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 7122 chr10 87836862 . GT GTCTGCGTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7123 chr10 87844729 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 7124 chr10 87845799 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 7125 chr10 87846147 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7126 chr10 87866606 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 7127 chr10 87867818 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7128 chr10 87869662 . a aCACTTG 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 7129 chr10 87884592 . C G 5.46 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 7130 chr10 87930109 . a aAGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7131 chr10 87941111 . TTCTCA TTCTCATGCTCTCA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,39:2:0:0/1:41 | |
| 7132 chr10 87947044 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 7133 chr10 87958964 . GCTCAct Gct 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7134 chr10 87984141 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7135 chr10 87988439 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7136 chr10 87989022 . T G 3.08 . DP=2;AF1=0.516;CI95=0.5,0.5;DP4=1,0,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,12:2:0:0/1:15 | |
| 7137 chr10 87991916 . C A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 7138 chr10 87994227 . G C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 7139 chr10 88002304 . T C 23.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=45 PL:DP:SP:GT:GQ 55,6,0:2:0:1/1:49 | |
| 7140 chr10 88003388 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 7141 chr10 88004666 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7142 chr10 88005990 . A T 4.78 . DP=2;AF1=0.5024;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,20:2:0:0/1:23 | |
| 7143 chr10 88018893 . G T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 7144 chr10 88023949 . CCC CCCTAACC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7145 chr10 88068765 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7146 chr10 88088867 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7147 chr10 88091257 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7148 chr10 88095634 . C CTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7149 chr10 88098747 . C G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 7150 chr10 88102500 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7151 chr10 88105119 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7152 chr10 88107008 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 7153 chr10 88112923 . a aAAAGT 7.36 . INDEL;DP=2;AF1=0.5012;CI95=0.5,0.5;DP4=0,1,0,1;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,23:2:0:0/1:26 | |
| 7154 chr10 88115653 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7155 chr10 88125460 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7156 chr10 88159005 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7157 chr10 88178611 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7158 chr10 88181445 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 7159 chr10 88203068 . T C 23 . DP=46;AF1=0.5003;CI95=0.5,0.5;DP4=1,1,2,1;MQ=49;PV4=1,1,0.15,1 PL:DP:SP:GT:GQ 53,0,29:5:0:0/1:32 | |
| 7160 chr10 88216302 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7161 chr10 88220866 . C T 4.77 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7162 chr10 88231877 . A T 9.31 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 7163 chr10 88231922 . T C 6.98 . DP=5;AF1=0.4999;CI95=0.5,0.5;DP4=3,0,2,0;MQ=48;PV4=1,0.044,0.037,1 PL:DP:SP:GT:GQ 36,0,101:5:0:0/1:39 | |
| 7164 chr10 88233628 . C G 99 . DP=17;AF1=1;CI95=1,1;DP4=0,0,14,0;MQ=47 PL:DP:SP:GT:GQ 150,42,0:14:0:1/1:99 | |
| 7165 chr10 88248706 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7166 chr10 88256943 . C T 99 . DP=12;AF1=1;CI95=1,1;DP4=0,0,4,5;MQ=46 PL:DP:SP:GT:GQ 179,27,0:9:0:1/1:99 | |
| 7167 chr10 88264527 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7168 chr10 88280960 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 7169 chr10 88306149 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7170 chr10 88316320 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7171 chr10 88323633 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7172 chr10 88338363 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7173 chr10 88386149 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 7174 chr10 88390991 . T TCGCGGAG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7175 chr10 88414133 . Aacacacacacacacacacacacac Aacacacacacacacacacacac 6.56 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 7176 chr10 88414459 . G T 12 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=46 PL:DP:SP:GT:GQ 43,6,0:2:0:1/1:49 | |
| 7177 chr10 88414919 . TGAGG T 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 7178 chr10 88417750 . T A 8.64 . DP=6;AF1=0.5;CI95=0.5,0.5;DP4=1,0,2,0;MQ=46;PV4=1,0.11,0.077,1 PL:DP:SP:GT:GQ 38,0,39:3:0:0/1:38 | |
| 7179 chr10 88428431 . G A 8.64 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=6,1,4,0;MQ=48;PV4=1,0.066,0.035,1 PL:DP:SP:GT:GQ 38,0,141:11:0:0/1:41 | |
| 7180 chr10 88428467 . CTG CTGTG 7.35 . INDEL;DP=16;AF1=0.5001;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,35:2:0:0/1:37 | |
| 7181 chr10 88432726 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 7182 chr10 88437324 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7183 chr10 88441607 . G A 10.2 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 41,6,0:2:0:1/1:49 | |
| 7184 chr10 88441681 . CC CCGTTGC 7.35 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 7185 chr10 88444221 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7186 chr10 88445385 . G C 65 . DP=13;AF1=1;CI95=1,1;DP4=0,0,7,1;MQ=49 PL:DP:SP:GT:GQ 98,24,0:8:0:1/1:96 | |
| 7187 chr10 88450032 . CCT C 3.25 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,44:2:0:0/1:40 | |
| 7188 chr10 88458996 . ttctctctctctctctctctctctctctct ttctctctctctctctctctctct 15.6 . INDEL;DP=10;AF1=0.5002;CI95=0.5,0.5;DP4=2,0,3,0;MQ=27;PV4=1,1,0.43,1 PL:DP:SP:GT:GQ 53,0,32:5:0:0/1:35 | |
| 7189 chr10 88463414 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7190 chr10 88470576 . AGCG AG 3.81 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 7191 chr10 88473459 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7192 chr10 88492734 . G A 8.64 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=0,7,3,0;MQ=48;PV4=0.0083,0.0024,0.11,1 PL:DP:SP:GT:GQ 38,0,178:10:21:0/1:41 | |
| 7193 chr10 88494352 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7194 chr10 88508495 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7195 chr10 88512598 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7196 chr10 88577011 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 7197 chr10 88578892 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7198 chr10 88602023 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 7199 chr10 88612101 . c cGCATGCAGCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7200 chr10 88628381 . CT CTCGTGTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7201 chr10 88630958 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 7202 chr10 88635889 . A G 10.4 . DP=13;AF1=0.5;CI95=0.5,0.5;DP4=0,10,0,2;MQ=49;PV4=1,0.37,5.2e-13,1 PL:DP:SP:GT:GQ 40,0,192:12:0:0/1:43 | |
| 7203 chr10 88664796 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7204 chr10 88669633 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7205 chr10 88677111 . C G 8.64 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=0,6,0,3;MQ=48;PV4=1,0.39,0.018,0.44 PL:DP:SP:GT:GQ 38,0,93:9:0:0/1:41 | |
| 7206 chr10 88677115 . T G 25 . DP=22;AF1=0.5016;CI95=0.5,0.5;DP4=0,2,0,6;MQ=49;PV4=1,0.44,0.053,1 PL:DP:SP:GT:GQ 55,0,22:8:0:0/1:25 | |
| 7207 chr10 88679086 . GT GTAT 3.25 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=1,2,0,1;MQ=50;PV4=1,1,1,0.16 PL:DP:SP:GT:GQ 38,0,92:4:0:0/1:41 | |
| 7208 chr10 88683566 . CT CTAT 3.25 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,1;MQ=50;PV4=1,1,1,0.27 PL:DP:SP:GT:GQ 38,0,68:4:0:0/1:41 | |
| 7209 chr10 88689842 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7210 chr10 88690667 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 7211 chr10 88705359 . C T 20 . DP=6;AF1=0.5;CI95=0.5,0.5;DP4=3,0,2,1;MQ=49;PV4=1,0.00073,0.058,1 PL:DP:SP:GT:GQ 50,0,107:6:0:0/1:53 | |
| 7212 chr10 88709303 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7213 chr10 88717140 . T A 44 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,2,1;MQ=46 PL:DP:SP:GT:GQ 76,9,0:3:0:1/1:63 | |
| 7214 chr10 88718484 . C A 3.54 . DP=11;AF1=0.4998;CI95=0.5,0.5;DP4=3,3,0,3;MQ=50;PV4=0.46,0.023,0.027,0.29 PL:DP:SP:GT:GQ 31,0,185:9:3:0/1:34 | |
| 7215 chr10 88722398 . A T 3.54 . DP=8;AF1=0.4998;CI95=0.5,0.5;DP4=3,2,0,2;MQ=49;PV4=0.43,0.15,0.059,1 PL:DP:SP:GT:GQ 31,0,152:7:4:0/1:34 | |
| 7216 chr10 88722886 . C CGGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7217 chr10 88752206 . G A 6.79 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 37,6,0:2:0:1/1:49 | |
| 7218 chr10 88761481 . T C 36 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=1,6,0,5;MQ=38;PV4=1,0.066,1,0.38 PL:DP:SP:GT:GQ 66,0,112:12:0:0/1:69 | |
| 7219 chr10 88768253 . A G 99 . DP=44;AF1=1;CI95=1,1;DP4=0,0,27,13;MQ=20 PL:DP:SP:GT:GQ 199,120,0:40:0:1/1:99 | |
| 7220 chr10 88768657 . C T 99 . DP=33;AF1=1;CI95=1,1;DP4=0,0,12,12;MQ=45 PL:DP:SP:GT:GQ 255,72,0:24:0:1/1:99 | |
| 7221 chr10 88769294 . C A 4.13 . DP=18;AF1=0.4998;CI95=0.5,0.5;DP4=3,7,3,0;MQ=47;PV4=0.07,0.025,0.29,1 PL:DP:SP:GT:GQ 32,0,244:13:12:0/1:35 | |
| 7222 chr10 88775836 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7223 chr10 88836524 . CT CTCAGGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7224 chr10 88847075 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7225 chr10 88876538 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 7226 chr10 88930456 . T C 3.41 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 32,6,0:2:0:1/1:49 | |
| 7227 chr10 88954954 . t tTTCGTATGA 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 7228 chr10 88977175 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 7229 chr10 89032621 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7230 chr10 89067231 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7231 chr10 89118125 . C T 39.5 . DP=14;AF1=1;CI95=0.5,1;DP4=0,0,3,1;MQ=48 PL:DP:SP:GT:GQ 72,12,0:4:0:1/1:72 | |
| 7232 chr10 89138579 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7233 chr10 89157826 . AC ACTCGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7234 chr10 89201844 . GA GAACTCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7235 chr10 89217404 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 7236 chr10 89218476 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7237 chr10 89220598 . G A 12 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=43 PL:DP:SP:GT:GQ 43,6,0:2:0:1/1:49 | |
| 7238 chr10 89220607 . A C 10.2 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=43 PL:DP:SP:GT:GQ 41,6,0:2:0:1/1:49 | |
| 7239 chr10 89310482 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7240 chr10 89312046 . T C 22 . DP=37;AF1=0.5;CI95=0.5,0.5;DP4=10,8,2,5;MQ=50;PV4=0.38,6.8e-07,0.0051,1 PL:DP:SP:GT:GQ 52,0,255:25:4:0/1:55 | |
| 7241 chr10 89313075 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7242 chr10 89379321 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 7243 chr10 89391641 . ttta t 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7244 chr10 89400029 . attt a 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 7245 chr10 89404965 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 7246 chr10 89406444 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 7247 chr10 89454150 . T TTTTGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7248 chr10 89469083 . CATATATATATATATATATA CATATATATATATATA 7.36 . INDEL;DP=18;AF1=0.501;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,24:2:0:0/1:27 | |
| 7249 chr10 89487007 . C G 70 . DP=32;AF1=0.5;CI95=0.5,0.5;DP4=18,0,11,0;MQ=49;PV4=1,1.8e-08,4.7e-06,0.2 PL:DP:SP:GT:GQ 100,0,239:29:0:0/1:99 | |
| 7250 chr10 89502591 . G GGGCGTTC 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=49 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 7251 chr10 89503498 . T G 4.77 . DP=11;AF1=0.4999;CI95=0.5,0.5;DP4=1,2,0,3;MQ=50;PV4=1,0.0021,0.19,1 PL:DP:SP:GT:GQ 33,0,120:6:0:0/1:36 | |
| 7252 chr10 89505340 . CAGA CA 5.79 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 42,0,44:2:0:0/1:43 | |
| 7253 chr10 89516502 . AAA AAAGTAA 5.8 . INDEL;DP=7;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 7254 chr10 89536910 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7255 chr10 89552383 . A G 5.29 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=43 PL:DP:SP:GT:GQ 35,6,0:2:0:1/1:49 | |
| 7256 chr10 89553558 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7257 chr10 89568183 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 7258 chr10 89575146 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 7259 chr10 89594984 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 7260 chr10 89605507 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 7261 chr10 89617823 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 7262 chr10 89627683 . GC GCATAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7263 chr10 89649582 . t tTGTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7264 chr10 89651629 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7265 chr10 89679591 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7266 chr10 89682241 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7267 chr10 89685292 . AACCA AA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7268 chr10 89704535 . CT CTAAT 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 7269 chr10 89733169 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7270 chr10 89789689 . a aGG 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 7271 chr10 89814925 . G A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 7272 chr10 89827602 . cag cAGag 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7273 chr10 89848416 . C CTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7274 chr10 89860030 . T C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 7275 chr10 89867702 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 7276 chr10 89873155 . CAATG C 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 7277 chr10 89883300 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7278 chr10 89885212 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=46 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7279 chr10 89891695 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 7280 chr10 89894338 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 7281 chr10 89894501 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 7282 chr10 89952665 . A T 8.65 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 7283 chr10 89976340 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7284 chr10 90000757 . C A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 7285 chr10 90008404 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7286 chr10 90012365 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 7287 chr10 90014070 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 7288 chr10 90026508 . aA aACA 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 7289 chr10 90051657 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7290 chr10 90056152 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7291 chr10 90069052 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7292 chr10 90074431 . T C 18.1 . DP=11;AF1=0.502;CI95=0.5,0.5;DP4=0,1,0,4;MQ=47;PV4=1,0.0016,0.21,0.13 PL:DP:SP:GT:GQ 48,0,21:5:0:0/1:24 | |
| 7293 chr10 90091721 . AC ACTGTGTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7294 chr10 90127812 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7295 chr10 90194813 . AG AGAGCCTAGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7296 chr10 90211725 . ct cTAGt 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7297 chr10 90218338 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 7298 chr10 90221565 . AAGA AAGAGGAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7299 chr10 90234762 . C CG 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 7300 chr10 90255951 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7301 chr10 90274614 . T A 3.02 . DP=2;AF1=0.501;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,23:2:0:0/1:25 | |
| 7302 chr10 90290851 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7303 chr10 90302559 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7304 chr10 90315319 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7305 chr10 90316043 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7306 chr10 90324818 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7307 chr10 90329450 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7308 chr10 90342837 . C G 68.5 . DP=37;AF1=1;CI95=0.5,1;DP4=1,0,4,4;MQ=49;PV4=1,0.24,1,0.45 PL:DP:SP:GT:GQ 99,4,0:9:0:1/1:45 | |
| 7309 chr10 90353033 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 7310 chr10 90355021 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 7311 chr10 90356519 . ATGTG ATGTGTGTG 12.7 . INDEL;DP=5;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7312 chr10 90356598 . A G 88.5 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,1,3;MQ=45 PL:DP:SP:GT:GQ 121,12,0:4:0:1/1:72 | |
| 7313 chr10 90356729 . C G 3.73 . DP=4;AF1=0.5429;CI95=0.5,1;DP4=0,1,0,2;MQ=49;PV4=1,1,0,0.17 PL:DP:SP:GT:GQ 31,0,8:3:0:0/1:11 | |
| 7314 chr10 90356731 . AATATT A 3.25 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,1;MQ=49;PV4=1,0.48,1,1 PL:DP:SP:GT:GQ 38,0,113:4:0:0/1:41 | |
| 7315 chr10 90358357 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7316 chr10 90380419 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7317 chr10 90384296 . ct cTTt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7318 chr10 90386650 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7319 chr10 90396315 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 7320 chr10 90403797 . A G 13.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47 PL:DP:SP:GT:GQ 45,6,0:2:0:1/1:49 | |
| 7321 chr10 90408666 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 7322 chr10 90437402 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7323 chr10 90438327 . T G 3.01 . DP=32;AF1=0.4997;CI95=0.5,0.5;DP4=9,8,0,5;MQ=49;PV4=0.054,0.02,1.9e-06,0.37 PL:DP:SP:GT:GQ 30,0,255:22:13:0/1:33 | |
| 7324 chr10 90441270 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7325 chr10 90452826 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 7326 chr10 90470026 . t tGAGCTCTAAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7327 chr10 90487518 . A G 8.65 . DP=10;AF1=0.5008;CI95=0.5,0.5;DP4=2,0,3,0;MQ=48;PV4=1,0.36,1,1 PL:DP:SP:GT:GQ 38,0,25:5:0:0/1:28 | |
| 7328 chr10 90487519 . A G 10.5 . DP=10;AF1=0.505;CI95=0.5,0.5;DP4=2,0,3,0;MQ=48;PV4=1,1,0.15,1 PL:DP:SP:GT:GQ 40,0,17:5:0:0/1:20 | |
| 7329 chr10 90487719 . T G 6.02 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=49 PL:DP:SP:GT:GQ 36,6,0:2:0:1/1:49 | |
| 7330 chr10 90488560 . C T 13 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=49 PL:DP:SP:GT:GQ 44,6,0:2:0:1/1:49 | |
| 7331 chr10 90516057 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7332 chr10 90522875 . G C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 7333 chr10 90534440 . C CGCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7334 chr10 90545972 . T G 84.1 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,4,2;MQ=48 PL:DP:SP:GT:GQ 117,18,0:6:0:1/1:90 | |
| 7335 chr10 90546007 . A G 39.5 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,3,1;MQ=48 PL:DP:SP:GT:GQ 72,12,0:4:0:1/1:72 | |
| 7336 chr10 90567191 . AAATG A 8.19 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 7337 chr10 90571339 . A G 9.53 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 7338 chr10 90577148 . G GAGAA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7339 chr10 90582744 . C A 90 . DP=30;AF1=0.5;CI95=0.5,0.5;DP4=4,12,4,6;MQ=49;PV4=0.66,7.3e-05,0.034,1 PL:DP:SP:GT:GQ 120,0,255:26:2:0/1:99 | |
| 7340 chr10 90585819 . G A 94 . DP=35;AF1=0.5;CI95=0.5,0.5;DP4=12,5,9,7;MQ=50;PV4=0.48,5.3e-17,0.037,0.38 PL:DP:SP:GT:GQ 124,0,255:33:3:0/1:99 | |
| 7341 chr10 90588867 . T C 4.61 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=50 PL:DP:SP:GT:GQ 34,6,0:2:0:1/1:49 | |
| 7342 chr10 90594923 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 7343 chr10 90611240 . AACAGACA AACA 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,0.47,1,1 PL:DP:SP:GT:GQ 41,0,79:3:0:0/1:44 | |
| 7344 chr10 90630885 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7345 chr10 90637613 . C G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 7346 chr10 90658955 . A C 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7347 chr10 90684922 . A C 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7348 chr10 90692204 . TT TTGGGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7349 chr10 90703524 . C G 60 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=10,0,9,0;MQ=49;PV4=1,9.9e-05,0.03,1 PL:DP:SP:GT:GQ 90,0,202:19:0:0/1:93 | |
| 7350 chr10 90719353 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7351 chr10 90736599 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 7352 chr10 90767395 . G C 99 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=44 PL:DP:SP:GT:GQ 140,15,0:5:0:1/1:75 | |
| 7353 chr10 90767640 . C T 6.79 . DP=21;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 37,6,0:2:0:1/1:49 | |
| 7354 chr10 90771829 . T C 57.5 . DP=29;AF1=0.8277;CI95=0.5,1;DP4=0,1,1,5;MQ=48;PV4=1,1,0.12,0.41 PL:DP:SP:GT:GQ 86,0,1:7:0:1/1:5 | |
| 7355 chr10 90787691 . A G 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 7356 chr10 90858517 . G GAAC 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 7357 chr10 90860038 . T G 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 7358 chr10 90888559 . CA CAAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7359 chr10 90899232 . TAAAAAAA TAAAAAAAA 3.52 . INDEL;DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=50 PL:DP:SP:GT:GQ 41,12,0:4:0:1/1:72 | |
| 7360 chr10 90916201 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7361 chr10 90920441 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7362 chr10 90921416 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 7363 chr10 90941456 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7364 chr10 90981921 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 7365 chr10 90990880 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7366 chr10 90993076 . TC TCCAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7367 chr10 91036723 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 7368 chr10 91041179 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7369 chr10 91043827 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7370 chr10 91066460 . T A 95 . DP=38;AF1=1;CI95=1,1;DP4=0,0,5,4;MQ=49 PL:DP:SP:GT:GQ 128,27,0:9:0:1/1:99 | |
| 7371 chr10 91096677 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7372 chr10 91099943 . C G 19 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=49 PL:DP:SP:GT:GQ 51,9,0:3:0:1/1:63 | |
| 7373 chr10 91114803 . g gTC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 7374 chr10 91122824 . T G 6.79 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=43 PL:DP:SP:GT:GQ 37,6,0:2:0:1/1:49 | |
| 7375 chr10 91137826 . T C 99 . DP=17;AF1=1;CI95=0.5,1;DP4=0,1,12,0;MQ=45;PV4=0.077,1,0.067,1 PL:DP:SP:GT:GQ 173,13,0:13:0:1/1:65 | |
| 7376 chr10 91141011 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7377 chr10 91143374 . G T 13.4 . DP=14;AF1=0.5263;CI95=0.5,1;DP4=1,0,2,1;MQ=49;PV4=1,0.36,0.26,1 PL:DP:SP:GT:GQ 43,0,10:4:0:0/1:13 | |
| 7378 chr10 91144491 . T G 3.54 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,2;MQ=49;PV4=1,1,0.3,0.0098 PL:DP:SP:GT:GQ 31,0,31:4:0:0/1:31 | |
| 7379 chr10 91157869 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 7380 chr10 91162182 . C T 99 . DP=21;AF1=1;CI95=1,1;DP4=0,0,1,16;MQ=49 PL:DP:SP:GT:GQ 147,51,0:17:0:1/1:99 | |
| 7381 chr10 91178000 . C T 99 . DP=42;AF1=1;CI95=1,1;DP4=0,0,2,37;MQ=47 PL:DP:SP:GT:GQ 209,117,0:39:0:1/1:99 | |
| 7382 chr10 91182133 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7383 chr10 91182405 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7384 chr10 91185244 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 7385 chr10 91186842 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 7386 chr10 91191669 . G GTACC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7387 chr10 91194043 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7388 chr10 91198503 . C T 4.13 . DP=24;AF1=0.4998;CI95=0.5,0.5;DP4=5,4,0,4;MQ=50;PV4=0.1,0.05,0.094,1 PL:DP:SP:GT:GQ 32,0,170:13:10:0/1:35 | |
| 7389 chr10 91200637 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7390 chr10 91230163 . C A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 7391 chr10 91244714 . T A 8.44 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 39,6,0:2:0:1/1:49 | |
| 7392 chr10 91258267 . GT GTGTTTACAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7393 chr10 91271598 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7394 chr10 91299306 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7395 chr10 91316747 . a aGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7396 chr10 91352966 . G A 99 . DP=20;AF1=1;CI95=1,1;DP4=0,0,6,8;MQ=49 PL:DP:SP:GT:GQ 158,42,0:14:0:1/1:99 | |
| 7397 chr10 91358743 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7398 chr10 91399627 . a aT 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 7399 chr10 91405412 . AGTG AGTGTG 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 7400 chr10 91407109 . T C 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7401 chr10 91410042 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 7402 chr10 91412107 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7403 chr10 91436173 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7404 chr10 91469229 . A G 12 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 43,6,0:2:0:1/1:49 | |
| 7405 chr10 91470834 . A C 9.31 . DP=21;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 7406 chr10 91473765 . A ATGC 7.57 . INDEL;DP=4;AF1=0.5336;CI95=0.5,1;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,9:2:0:0/1:12 | |
| 7407 chr10 91479545 . T TCACAGA 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,1,1,0.17 PL:DP:SP:GT:GQ 41,0,72:3:0:0/1:44 | |
| 7408 chr10 91483927 . T TCCACCCA 12.7 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7409 chr10 91487284 . C T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 7410 chr10 91491897 . t tCA 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 7411 chr10 91497631 . T A 41.5 . DP=21;AF1=1;CI95=0.5,1;DP4=0,0,2,2;MQ=49 PL:DP:SP:GT:GQ 74,12,0:4:0:1/1:72 | |
| 7412 chr10 91497902 . CTAAA CTAAAAGTAAA 36.2 . INDEL;DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=50 PL:DP:SP:GT:GQ 75,6,0:2:0:1/1:49 | |
| 7413 chr10 91498127 . T C 99 . DP=28;AF1=1;CI95=1,1;DP4=0,1,8,17;MQ=47;PV4=1,1,0.05,1 PL:DP:SP:GT:GQ 255,56,0:26:0:1/1:99 | |
| 7414 chr10 91498254 . A G 4.61 . DP=18;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=48 PL:DP:SP:GT:GQ 34,6,0:2:0:1/1:49 | |
| 7415 chr10 91498318 . A G 53.1 . DP=13;AF1=1;CI95=0.5,1;DP4=0,0,6,0;MQ=48 PL:DP:SP:GT:GQ 86,18,0:6:0:1/1:90 | |
| 7416 chr10 91502803 . G A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 7417 chr10 91503660 . A G 17.1 . DP=19;AF1=1;CI95=0.5,1;DP4=0,0,2,1;MQ=49 PL:DP:SP:GT:GQ 49,9,0:3:0:1/1:63 | |
| 7418 chr10 91503750 . G T,C 3.98 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=48 PL:DP:SP:GT:GQ 40,13,32,7,0,32:3:0:1/1:49 | |
| 7419 chr10 91506189 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 7420 chr10 91518388 . A G 53.5 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=47 PL:DP:SP:GT:GQ 86,12,0:4:0:1/1:72 | |
| 7421 chr10 91522605 . G C 99 . DP=11;AF1=1;CI95=1,1;DP4=0,0,1,9;MQ=45 PL:DP:SP:GT:GQ 181,30,0:10:0:1/1:99 | |
| 7422 chr10 91528063 . AA AACA 5.08 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,1,1,0.12 PL:DP:SP:GT:GQ 41,0,50:3:0:0/1:43 | |
| 7423 chr10 91561020 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7424 chr10 91577371 . t tGCAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7425 chr10 91600958 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 7426 chr10 91613263 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7427 chr10 91613323 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7428 chr10 91642932 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 7429 chr10 91678056 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7430 chr10 91685212 . A T 3.55 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7431 chr10 91715669 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 7432 chr10 91738755 . T C 62 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=2,4,1,4;MQ=48;PV4=1,3.8e-05,0.0033,1 PL:DP:SP:GT:GQ 92,0,210:11:0:0/1:95 | |
| 7433 chr10 91738825 . T C 11.1 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 42,6,0:2:0:1/1:49 | |
| 7434 chr10 91755467 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7435 chr10 91755870 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7436 chr10 91756086 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 7437 chr10 91775209 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7438 chr10 91814364 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7439 chr10 91845903 . t tCTAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7440 chr10 91871577 . CA CTA 31.2 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=50 PL:DP:SP:GT:GQ 70,6,0:2:0:1/1:49 | |
| 7441 chr10 91891927 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 7442 chr10 91897064 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7443 chr10 91906629 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7444 chr10 91927342 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7445 chr10 91930385 . T TA 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 7446 chr10 91946867 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7447 chr10 91960520 . ct cTCATTTAt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7448 chr10 91967320 . C G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 7449 chr10 91970244 . G T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 7450 chr10 91976547 . t tC 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 7451 chr10 91979189 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7452 chr10 91998574 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7453 chr10 92007506 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7454 chr10 92079089 . G C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 7455 chr10 92086332 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 7456 chr10 92098728 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 7457 chr10 92141969 . aa aAGTACCa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7458 chr10 92144297 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7459 chr10 92151316 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 7460 chr10 92158747 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7461 chr10 92180489 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7462 chr10 92180498 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7463 chr10 92181008 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7464 chr10 92191552 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7465 chr10 92219286 . t tCCTACCGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7466 chr10 92226864 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7467 chr10 92267135 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7468 chr10 92347683 . C CGT 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 7469 chr10 92357491 . G GTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7470 chr10 92359643 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7471 chr10 92380044 . CC CCGCGCAGTATAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7472 chr10 92393784 . C A 3.04 . DP=2;AF1=0.5061;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,16:2:0:0/1:19 | |
| 7473 chr10 92411486 . G GTCGGTGA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 7474 chr10 92418469 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 7475 chr10 92433431 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7476 chr10 92433538 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 7477 chr10 92437935 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7478 chr10 92457364 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 7479 chr10 92467641 . t tTTCCTCCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7480 chr10 92498897 . G GAACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7481 chr10 92510363 . T TCTCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7482 chr10 92522777 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 7483 chr10 92535958 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 7484 chr10 92552642 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 7485 chr10 92583899 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7486 chr10 92606928 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7487 chr10 92632518 . G T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 7488 chr10 92654202 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7489 chr10 92656513 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7490 chr10 92671846 . T A 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7491 chr10 92678740 . Aataaataaatatatatatata Ataaataaatatatatatata 5.62 . INDEL;DP=15;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=49 PL:DP:SP:GT:GQ 43,6,0:2:0:1/1:49 | |
| 7492 chr10 92678748 . A C 9.31 . DP=12;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 7493 chr10 92704560 . G T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 7494 chr10 92726375 . tca tCACCca 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7495 chr10 92730170 . ag aGTg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7496 chr10 92732211 . T A 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7497 chr10 92737042 . A C 5.46 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 7498 chr10 92763239 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7499 chr10 92769660 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7500 chr10 92771508 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7501 chr10 92808659 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 7502 chr10 92813828 . A G 40.5 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=46 PL:DP:SP:GT:GQ 73,12,0:4:0:1/1:72 | |
| 7503 chr10 92814111 . GT GTCAT 11.8 . INDEL;DP=13;AF1=0.5;CI95=0.5,0.5;DP4=4,3,1,1;MQ=50;PV4=1,0.28,1,0.062 PL:DP:SP:GT:GQ 49,0,192:9:0:0/1:52 | |
| 7504 chr10 92824033 . GGGC G 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7505 chr10 92825812 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7506 chr10 92870682 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7507 chr10 92872389 . T A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 7508 chr10 92875495 . AGCAG A 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7509 chr10 92883156 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7510 chr10 92897348 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 7511 chr10 92898227 . a aTT 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 7512 chr10 92919639 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 7513 chr10 92928314 . TG TGAAG 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 7514 chr10 92931305 . T C 5.46 . DP=2;AF1=0.5002;CI95=0.5,0.5;DP4=0,1,0,1;MQ=42;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,29:2:0:0/1:31 | |
| 7515 chr10 92975118 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 7516 chr10 92992530 . agagg ag 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7517 chr10 93000211 . G A 99 . DP=15;AF1=1;CI95=1,1;DP4=0,0,13,0;MQ=45 PL:DP:SP:GT:GQ 161,39,0:13:0:1/1:99 | |
| 7518 chr10 93010456 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7519 chr10 93024316 . TA TAA 24.5 . INDEL;DP=17;AF1=0.5;CI95=0.5,0.5;DP4=0,10,0,3;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 62,0,125:13:0:0/1:65 | |
| 7520 chr10 93024319 . AT ATT 15.6 . INDEL;DP=16;AF1=0.5;CI95=0.5,0.5;DP4=0,9,0,3;MQ=50;PV4=1,1,1,0.11 PL:DP:SP:GT:GQ 53,0,122:12:0:0/1:56 | |
| 7521 chr10 93029371 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7522 chr10 93031282 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 7523 chr10 93034563 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 7524 chr10 93038115 . T G 28 . DP=23;AF1=0.5;CI95=0.5,0.5;DP4=1,8,0,5;MQ=49;PV4=1,0.026,0.00012,0.46 PL:DP:SP:GT:GQ 58,0,203:14:0:0/1:61 | |
| 7525 chr10 93059101 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7526 chr10 93102918 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7527 chr10 93111149 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7528 chr10 93117392 . G T 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 7529 chr10 93142843 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 7530 chr10 93149220 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7531 chr10 93151059 . C A 4.61 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 34,6,0:2:0:1/1:49 | |
| 7532 chr10 93156775 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7533 chr10 93157551 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7534 chr10 93183105 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 7535 chr10 93221077 . G A 99 . DP=25;AF1=1;CI95=1,1;DP4=0,0,1,17;MQ=45 PL:DP:SP:GT:GQ 226,54,0:18:0:1/1:99 | |
| 7536 chr10 93228206 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 7537 chr10 93242854 . A G 5.46 . DP=12;AF1=0.4999;CI95=0.5,0.5;DP4=0,3,0,2;MQ=47;PV4=1,0.087,0.032,0.25 PL:DP:SP:GT:GQ 34,0,88:5:0:0/1:37 | |
| 7538 chr10 93257936 . T G 4.13 . DP=12;AF1=0.4999;CI95=0.5,0.5;DP4=1,1,0,4;MQ=49;PV4=0.33,0.12,1,0.46 PL:DP:SP:GT:GQ 32,0,40:6:0:0/1:34 | |
| 7539 chr10 93283705 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7540 chr10 93301683 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7541 chr10 93316334 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7542 chr10 93327487 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7543 chr10 93336448 . t tTTATTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7544 chr10 93340087 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 7545 chr10 93344661 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7546 chr10 93374271 . TGC TGCACAGC 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=48 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 7547 chr10 93381596 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 7548 chr10 93387734 . G A 26 . DP=3;AF1=0.5002;CI95=0.5,0.5;DP4=0,1,2,0;MQ=45;PV4=0.33,0.37,0.037,0.26 PL:DP:SP:GT:GQ 56,0,31:3:0:0/1:34 | |
| 7549 chr10 93408375 . a aGCAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7550 chr10 93415536 . t tTGGCACCTGCA 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 7551 chr10 93434209 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7552 chr10 93439703 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7553 chr10 93447527 . C A 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7554 chr10 93465312 . A C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 7555 chr10 93468629 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 7556 chr10 93549691 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 7557 chr10 93567143 . G A 6.98 . DP=7;AF1=0.4999;CI95=0.5,0.5;DP4=1,1,2,0;MQ=49;PV4=1,0.27,0.14,0.044 PL:DP:SP:GT:GQ 36,0,58:4:0:0/1:39 | |
| 7558 chr10 93567983 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 7559 chr10 93588201 . G C 3.59 . DP=13;AF1=0.51;CI95=0.5,0.5;DP4=0,1,0,2;MQ=45;PV4=1,0.45,0.33,1 PL:DP:SP:GT:GQ 31,0,14:3:0:0/1:17 | |
| 7560 chr10 93588208 . G A 84 . DP=11;AF1=1;CI95=1,1;DP4=0,0,0,10;MQ=48 PL:DP:SP:GT:GQ 117,30,0:10:0:1/1:99 | |
| 7561 chr10 93588870 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7562 chr10 93600297 . ATGTTGTGTT ATGTT 99 . INDEL;DP=39;AF1=0.5;CI95=0.5,0.5;DP4=23,2,11,1;MQ=50;PV4=1,0.099,1,1 PL:DP:SP:GT:GQ 232,0,255:37:0:0/1:99 | |
| 7563 chr10 93601285 . G C 31 . DP=5;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,2;MQ=47;PV4=1,0.11,0,0.17 PL:DP:SP:GT:GQ 61,0,112:5:0:0/1:64 | |
| 7564 chr10 93604827 . A G 8.44 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 39,6,0:2:0:1/1:49 | |
| 7565 chr10 93611176 . ATATG ATATGTATG 99 . INDEL;DP=9;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=50 PL:DP:SP:GT:GQ 202,21,0:7:0:1/1:84 | |
| 7566 chr10 93617306 . A G 27 . DP=17;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=48 PL:DP:SP:GT:GQ 59,9,0:3:0:1/1:63 | |
| 7567 chr10 93619280 . T C 99 . DP=44;AF1=0.5;CI95=0.5,0.5;DP4=8,16,6,8;MQ=49;PV4=0.73,1.9e-08,7.9e-08,0.2 PL:DP:SP:GT:GQ 155,0,255:38:1:0/1:99 | |
| 7568 chr10 93623093 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7569 chr10 93661517 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 7570 chr10 93665723 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7571 chr10 93686494 . AT ATCT 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 7572 chr10 93702328 . C G 49 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=5,7,0,12;MQ=49;PV4=0.037,0.00029,0.16,1 PL:DP:SP:GT:GQ 79,0,255:24:14:0/1:82 | |
| 7573 chr10 93702377 . T G 38 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=0,5,0,6;MQ=48;PV4=1,1,0.0002,1 PL:DP:SP:GT:GQ 68,0,38:11:0:0/1:41 | |
| 7574 chr10 93713758 . T G 6.2 . DP=9;AF1=0.4999;CI95=0.5,0.5;DP4=0,6,0,2;MQ=49;PV4=1,0.15,0.015,0.012 PL:DP:SP:GT:GQ 35,0,150:8:0:0/1:38 | |
| 7575 chr10 93716899 . G C 7.59 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 38,6,0:2:0:1/1:49 | |
| 7576 chr10 93726842 . A T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 7577 chr10 93740167 . C CTCACAGTCT 12.7 . INDEL;DP=4;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7578 chr10 93741176 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 7579 chr10 93763061 . tca t 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 7580 chr10 93764396 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7581 chr10 93770122 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7582 chr10 93770768 . T C 84 . DP=7;AF1=0.5;CI95=0.5,0.5;DP4=3,0,4,0;MQ=46;PV4=1,0.0035,0,1 PL:DP:SP:GT:GQ 114,0,107:7:0:0/1:99 | |
| 7583 chr10 93770917 . a aTT 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 7584 chr10 93773911 . A AATGGCGCATCG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7585 chr10 93776184 . G C 3.54 . DP=14;AF1=0.4998;CI95=0.5,0.5;DP4=1,1,0,2;MQ=48;PV4=1,0.27,0.13,0.23 PL:DP:SP:GT:GQ 31,0,54:4:0:0/1:34 | |
| 7586 chr10 93778645 . T A 4.13 . DP=24;AF1=0.4998;CI95=0.5,0.5;DP4=11,3,0,4;MQ=49;PV4=0.011,0.002,0.0026,0.0032 PL:DP:SP:GT:GQ 32,0,255:18:19:0/1:35 | |
| 7587 chr10 93784270 . tg tGTGAAACAg 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=48 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 7588 chr10 93812077 . A T 3.66 . DP=6;AF1=0.5261;CI95=0.5,1;DP4=1,0,2,0;MQ=44;PV4=1,1,0.31,1 PL:DP:SP:GT:GQ 31,0,10:3:0:0/1:13 | |
| 7589 chr10 93812079 . A G 31 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=44 PL:DP:SP:GT:GQ 63,9,0:3:0:1/1:63 | |
| 7590 chr10 93822973 . CAA CAATTAA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7591 chr10 93824889 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7592 chr10 93826995 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7593 chr10 93837585 . G C 4.77 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7594 chr10 93841227 . A G 99 . DP=21;AF1=0.501;CI95=0.5,0.5;DP4=1,1,4,11;MQ=44;PV4=0.51,0.082,0.0021,1 PL:DP:SP:GT:GQ 243,0,24:17:3:0/1:27 | |
| 7595 chr10 93842696 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 7596 chr10 93848430 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7597 chr10 93851714 . T C 31.5 . DP=24;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=49 PL:DP:SP:GT:GQ 64,12,0:4:0:1/1:72 | |
| 7598 chr10 93852885 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7599 chr10 93862767 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 7600 chr10 93878609 . A G 15.1 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=49 PL:DP:SP:GT:GQ 47,9,0:3:0:1/1:63 | |
| 7601 chr10 93879053 . TT TTAGCT 5.08 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,1,1,0.39 PL:DP:SP:GT:GQ 41,0,83:3:0:0/1:44 | |
| 7602 chr10 93879199 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7603 chr10 93904826 . A G 65 . DP=26;AF1=0.5;CI95=0.5,0.5;DP4=7,6,2,4;MQ=48;PV4=0.63,0.09,0.00049,1 PL:DP:SP:GT:GQ 95,0,255:19:2:0/1:98 | |
| 7604 chr10 93935403 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7605 chr10 93944023 . G C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 7606 chr10 93955402 . G C 4.19 . DP=2;AF1=0.5127;CI95=0.5,0.5;DP4=0,1,0,1;MQ=41;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,13:2:0:0/1:16 | |
| 7607 chr10 93961858 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 7608 chr10 93969747 . A ATAAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7609 chr10 93993791 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7610 chr10 93994370 . cctc cc 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 7611 chr10 93998371 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 7612 chr10 93999125 . CCATTA C 3.25 . INDEL;DP=7;AF1=0.5;CI95=0.5,0.5;DP4=3,0,0,1;MQ=50;PV4=0.25,1,1,1 PL:DP:SP:GT:GQ 38,0,86:4:0:0/1:41 | |
| 7613 chr10 94066033 . A T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 7614 chr10 94071412 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7615 chr10 94080983 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 7616 chr10 94081317 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7617 chr10 94085919 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7618 chr10 94100762 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7619 chr10 94102326 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 7620 chr10 94110776 . A T 12 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 43,6,0:2:0:1/1:49 | |
| 7621 chr10 94125100 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7622 chr10 94158959 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7623 chr10 94172190 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 7624 chr10 94190659 . GA GAAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7625 chr10 94192603 . TG TGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7626 chr10 94192897 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7627 chr10 94214182 . T A 4.77 . DP=11;AF1=0.4999;CI95=0.5,0.5;DP4=3,0,2,0;MQ=47;PV4=1,1,0.087,0.13 PL:DP:SP:GT:GQ 33,0,44:5:0:0/1:36 | |
| 7628 chr10 94214183 . C G 5.46 . DP=11;AF1=0.5003;CI95=0.5,0.5;DP4=2,0,2,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,28:4:0:0/1:30 | |
| 7629 chr10 94221041 . C G 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7630 chr10 94229808 . C T 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 7631 chr10 94234737 . G A 47 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=0,6,0,4;MQ=47;PV4=1,0.061,0.0019,1 PL:DP:SP:GT:GQ 77,0,158:10:0:0/1:80 | |
| 7632 chr10 94246738 . CC CCCCGAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7633 chr10 94261791 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7634 chr10 94271847 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 7635 chr10 94340358 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7636 chr10 94364933 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 7637 chr10 94367287 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 7638 chr10 94414055 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7639 chr10 94421676 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7640 chr10 94428109 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 7641 chr10 94428759 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7642 chr10 94452148 . TT TCCCAGAAT 29.2 . INDEL;DP=4;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=50 PL:DP:SP:GT:GQ 68,6,0:2:0:1/1:49 | |
| 7643 chr10 94452169 . AA AACTTGA 7.36 . INDEL;DP=8;AF1=0.501;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,24:2:0:0/1:27 | |
| 7644 chr10 94452171 . AA AATA 5.08 . INDEL;DP=10;AF1=0.5;CI95=0.5,0.5;DP4=1,1,0,1;MQ=50;PV4=1,1,1,0.33 PL:DP:SP:GT:GQ 41,0,71:3:0:0/1:44 | |
| 7645 chr10 94473978 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7646 chr10 94473980 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7647 chr10 94494581 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7648 chr10 94498880 . G T 5.48 . DP=2;AF1=0.5039;CI95=0.5,0.5;DP4=0,1,1,0;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,18:2:0:0/1:21 | |
| 7649 chr10 94502183 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7650 chr10 94508502 . ctTat c 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7651 chr10 94513017 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7652 chr10 94527216 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7653 chr10 94547982 . TT TTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7654 chr10 94561834 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7655 chr10 94565313 . C CA 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 7656 chr10 94569630 . a aACAAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7657 chr10 94590233 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7658 chr10 94594565 . G A 99 . DP=43;AF1=1;CI95=1,1;DP4=0,0,5,27;MQ=49 PL:DP:SP:GT:GQ 206,96,0:32:0:1/1:99 | |
| 7659 chr10 94600283 . T C 6.98 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7660 chr10 94618148 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7661 chr10 94641845 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7662 chr10 94641927 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7663 chr10 94661343 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 7664 chr10 94688167 . C G 20 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=3,3,0,5;MQ=48;PV4=0.18,0.16,0.11,0.17 PL:DP:SP:GT:GQ 50,0,128:11:7:0/1:53 | |
| 7665 chr10 94695617 . C T 91 . DP=13;AF1=1;CI95=1,1;DP4=0,0,1,8;MQ=48 PL:DP:SP:GT:GQ 124,27,0:9:0:1/1:99 | |
| 7666 chr10 94714427 . C G 70 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=6,6,4,2;MQ=49;PV4=0.64,0.00068,6.1e-05,0.48 PL:DP:SP:GT:GQ 100,0,255:18:2:0/1:99 | |
| 7667 chr10 94714679 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 7668 chr10 94738972 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7669 chr10 94757270 . C T 64 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=2,0,5,0;MQ=46;PV4=1,0.17,0.098,1 PL:DP:SP:GT:GQ 94,0,50:7:0:0/1:53 | |
| 7670 chr10 94762285 . tgc t 3.25 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 7671 chr10 94763053 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 7672 chr10 94775034 . A C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 7673 chr10 94815989 . CTAAC CTAACCATTAAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7674 chr10 94816807 . GAAA GAAAA 39.5 . INDEL;DP=20;AF1=0.5;CI95=0.5,0.5;DP4=0,5,0,5;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 77,0,76:10:0:0/1:76 | |
| 7675 chr10 94824024 . C A 41 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=45 PL:DP:SP:GT:GQ 73,9,0:3:0:1/1:63 | |
| 7676 chr10 94824488 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7677 chr10 94824729 . A T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 7678 chr10 94860216 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7679 chr10 94880513 . t tTACGCCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7680 chr10 94900653 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7681 chr10 94929302 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7682 chr10 94947451 . g gTCTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7683 chr10 94966708 . G A 12 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 43,6,0:2:0:1/1:49 | |
| 7684 chr10 94966908 . TTC TTCTC 3.25 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=2,1,1,0;MQ=50;PV4=1,1,1,0.48 PL:DP:SP:GT:GQ 38,0,76:4:0:0/1:41 | |
| 7685 chr10 94978902 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7686 chr10 94980651 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 7687 chr10 94982790 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 7688 chr10 94985830 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7689 chr10 95042207 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7690 chr10 95043763 . G A 97 . DP=18;AF1=1;CI95=1,1;DP4=0,0,17,0;MQ=23 PL:DP:SP:GT:GQ 130,51,0:17:0:1/1:99 | |
| 7691 chr10 95066974 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 7692 chr10 95072906 . T C 12.5 . DP=28;AF1=0.5263;CI95=0.5,1;DP4=0,1,3,0;MQ=49;PV4=0.25,0.44,0.22,1 PL:DP:SP:GT:GQ 42,0,10:4:0:0/1:13 | |
| 7693 chr10 95073046 . A G 66.3 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=45 PL:DP:SP:GT:GQ 99,15,0:5:0:1/1:75 | |
| 7694 chr10 95083853 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 7695 chr10 95085787 . G C 21 . DP=13;AF1=0.5;CI95=0.5,0.5;DP4=0,7,0,4;MQ=49;PV4=1,0.024,0.012,1 PL:DP:SP:GT:GQ 51,0,149:11:0:0/1:54 | |
| 7696 chr10 95085890 . ACCAGG A 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7697 chr10 95089303 . CCT CCTAACT 42 . INDEL;DP=5;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=45 PL:DP:SP:GT:GQ 82,12,0:4:0:1/1:72 | |
| 7698 chr10 95089312 . T C 99 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,4,1;MQ=45 PL:DP:SP:GT:GQ 133,15,0:5:0:1/1:75 | |
| 7699 chr10 95090853 . T G 16.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=43 PL:DP:SP:GT:GQ 48,6,0:2:0:1/1:49 | |
| 7700 chr10 95093875 . A C 3.01 . DP=3;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,0,1;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 7701 chr10 95111123 . A G 93 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=12,0,10,3;MQ=49;PV4=0.22,4.5e-08,1.7e-06,0.11 PL:DP:SP:GT:GQ 123,0,211:25:7:0/1:99 | |
| 7702 chr10 95113617 . A G 99 . DP=38;AF1=0.5;CI95=0.5,0.5;DP4=5,8,4,16;MQ=47;PV4=0.43,0.0024,0.027,0.4 PL:DP:SP:GT:GQ 220,0,255:33:4:0/1:99 | |
| 7703 chr10 95122550 . a aGGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7704 chr10 95124092 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 7705 chr10 95132729 . T C 99 . DP=72;AF1=0.5;CI95=0.5,0.5;DP4=19,17,19,12;MQ=48;PV4=0.62,4.2e-22,1.1e-13,1 PL:DP:SP:GT:GQ 205,0,255:67:2:0/1:99 | |
| 7706 chr10 95132905 . C T 18 . DP=24;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=49 PL:DP:SP:GT:GQ 50,9,0:3:0:1/1:63 | |
| 7707 chr10 95139019 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7708 chr10 95162113 . G C 36.8 . DP=17;AF1=0.95;CI95=0.5,1;DP4=0,2,0,11;MQ=49;PV4=1,0.37,0.3,1 PL:DP:SP:GT:GQ 65,0,0:13:0:1/1:10 | |
| 7709 chr10 95164040 . A G 66.3 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=46 PL:DP:SP:GT:GQ 99,15,0:5:0:1/1:75 | |
| 7710 chr10 95164542 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 7711 chr10 95196106 . TAAAG T 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7712 chr10 95215675 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7713 chr10 95216677 . T C 4.77 . DP=13;AF1=0.4999;CI95=0.5,0.5;DP4=5,0,0,3;MQ=48;PV4=0.018,0.0019,1,1 PL:DP:SP:GT:GQ 33,0,144:8:17:0/1:36 | |
| 7714 chr10 95241999 . A C 99 . DP=21;AF1=1;CI95=1,1;DP4=0,0,0,16;MQ=45 PL:DP:SP:GT:GQ 177,48,0:16:0:1/1:99 | |
| 7715 chr10 95246044 . T A 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 7716 chr10 95262981 . A G 99 . DP=30;AF1=1;CI95=1,1;DP4=0,0,13,12;MQ=49 PL:DP:SP:GT:GQ 214,75,0:25:0:1/1:99 | |
| 7717 chr10 95263172 . TT TTGAGGGT 5.08 . INDEL;DP=8;AF1=0.5;CI95=0.5,0.5;DP4=1,1,0,1;MQ=48;PV4=1,1,1,0.43 PL:DP:SP:GT:GQ 41,0,47:3:0:0/1:43 | |
| 7718 chr10 95276673 . G A 25 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=6,0,3,0;MQ=47;PV4=1,0.14,9.1e-06,1 PL:DP:SP:GT:GQ 55,0,143:9:0:0/1:58 | |
| 7719 chr10 95276718 . T C 99 . DP=12;AF1=1;CI95=1,1;DP4=0,0,4,7;MQ=45 PL:DP:SP:GT:GQ 238,33,0:11:0:1/1:99 | |
| 7720 chr10 95305000 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7721 chr10 95307189 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7722 chr10 95312513 . T C 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 7723 chr10 95320163 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7724 chr10 95328093 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7725 chr10 95329303 . CGTG CGTGTG 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 7726 chr10 95332913 . G A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 7727 chr10 95344399 . G A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 7728 chr10 95353610 . C A 3.01 . DP=29;AF1=0.4997;CI95=0.5,0.5;DP4=5,3,1,3;MQ=49;PV4=0.55,0.016,0.087,1 PL:DP:SP:GT:GQ 30,0,218:12:3:0/1:33 | |
| 7729 chr10 95353617 . C G 3.01 . DP=31;AF1=0.4997;CI95=0.5,0.5;DP4=10,2,0,6;MQ=49;PV4=0.0015,0.0038,1,1 PL:DP:SP:GT:GQ 30,0,233:18:28:0/1:33 | |
| 7730 chr10 95353817 . C G 62.2 . DP=32;AF1=1;CI95=0.5,1;DP4=1,0,0,11;MQ=48;PV4=0.083,0.15,0.17,1 PL:DP:SP:GT:GQ 94,8,0:12:0:1/1:56 | |
| 7731 chr10 95359401 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 7732 chr10 95363155 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7733 chr10 95389139 . C A 21 . DP=11;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=48 PL:DP:SP:GT:GQ 53,9,0:3:0:1/1:63 | |
| 7734 chr10 95400773 . T G 25 . DP=20;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,4;MQ=49;PV4=1,0.11,0.019,0.18 PL:DP:SP:GT:GQ 55,0,77:8:0:0/1:58 | |
| 7735 chr10 95411241 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7736 chr10 95430634 . A T 5.29 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=50 PL:DP:SP:GT:GQ 35,6,0:2:0:1/1:49 | |
| 7737 chr10 95447190 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7738 chr10 95451083 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7739 chr10 95459817 . C T 57 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=6,0,5,3;MQ=50;PV4=0.21,2e-07,0.12,0.12 PL:DP:SP:GT:GQ 87,0,161:14:7:0/1:90 | |
| 7740 chr10 95466947 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7741 chr10 95468759 . gct gCTCTct 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 7742 chr10 95484085 . A G 7.8 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 7743 chr10 95516058 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 7744 chr10 95518136 . T A 18.1 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,4;MQ=49;PV4=1,1,0.28,1 PL:DP:SP:GT:GQ 48,0,44:8:0:0/1:46 | |
| 7745 chr10 95527127 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7746 chr10 95530015 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7747 chr10 95552925 . T C 19.8 . DP=10;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 51,6,0:2:0:1/1:49 | |
| 7748 chr10 95557593 . T G 24 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=44 PL:DP:SP:GT:GQ 56,9,0:3:0:1/1:63 | |
| 7749 chr10 95565400 . C A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 7750 chr10 95618153 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7751 chr10 95625180 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 7752 chr10 95636693 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 7753 chr10 95641536 . A C 28 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,1;MQ=49 PL:DP:SP:GT:GQ 60,9,0:3:0:1/1:63 | |
| 7754 chr10 95657126 . ATACT A 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7755 chr10 95664725 . A ACTGGCTC 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 7756 chr10 95669893 . C G 23.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=46 PL:DP:SP:GT:GQ 55,6,0:2:0:1/1:49 | |
| 7757 chr10 95672877 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 7758 chr10 95686087 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 7759 chr10 95719311 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 7760 chr10 95720696 . TT TTTCT 5.08 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=1,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,68:3:0:0/1:44 | |
| 7761 chr10 95724084 . G C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 7762 chr10 95754921 . C CG 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 7763 chr10 95778004 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7764 chr10 95778659 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7765 chr10 95791613 . T C 38 . DP=44;AF1=0.5;CI95=0.5,0.5;DP4=22,11,7,3;MQ=49;PV4=1,1.5e-09,1.9e-07,1 PL:DP:SP:GT:GQ 68,0,255:43:0:0/1:71 | |
| 7766 chr10 95805317 . aagg a 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 7767 chr10 95815596 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7768 chr10 95815619 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 7769 chr10 95828180 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 7770 chr10 95829572 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 7771 chr10 95834654 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7772 chr10 95845324 . CA CAAAAGGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7773 chr10 95854823 . AC ACCC 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 7774 chr10 95861766 . GAA GAAAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7775 chr10 95862392 . C T 5.46 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 7776 chr10 95867070 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 7777 chr10 95879950 . TAA TAATCTGAGAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7778 chr10 95888472 . C CCTCTCTGCCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7779 chr10 95900266 . C G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 7780 chr10 95904766 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7781 chr10 95908396 . G GTCTCCCAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7782 chr10 95909706 . TG TGGCCTGGG 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 7783 chr10 95915925 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7784 chr10 95926982 . C A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 7785 chr10 95936895 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7786 chr10 95957099 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7787 chr10 95974892 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 7788 chr10 95976350 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7789 chr10 95994131 . C T 26 . DP=17;AF1=0.5001;CI95=0.5,0.5;DP4=0,3,0,5;MQ=49;PV4=1,0.32,0.2,1 PL:DP:SP:GT:GQ 56,0,35:8:0:0/1:38 | |
| 7790 chr10 96008002 . G GA 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 7791 chr10 96014622 . C G 64 . DP=21;AF1=1;CI95=1,1;DP4=1,0,17,0;MQ=49;PV4=1,0.14,0.27,1 PL:DP:SP:GT:GQ 97,28,0:18:0:1/1:99 | |
| 7792 chr10 96039597 . G C 51.1 . DP=16;AF1=1;CI95=0.5,1;DP4=0,0,4,2;MQ=49 PL:DP:SP:GT:GQ 84,18,0:6:0:1/1:90 | |
| 7793 chr10 96044579 . A C 8.64 . DP=13;AF1=0.5;CI95=0.5,0.5;DP4=2,4,3,0;MQ=49;PV4=0.17,0.3,0.012,1 PL:DP:SP:GT:GQ 38,0,122:9:8:0/1:41 | |
| 7794 chr10 96044914 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 7795 chr10 96053923 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7796 chr10 96079484 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7797 chr10 96089309 . g gTGTCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7798 chr10 96100119 . C T 9.52 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=2,9,0,5;MQ=49;PV4=1,0.0003,0.00098,1 PL:DP:SP:GT:GQ 39,0,255:16:0:0/1:42 | |
| 7799 chr10 96100299 . T G 6.2 . DP=6;AF1=0.4999;CI95=0.5,0.5;DP4=0,3,0,3;MQ=45;PV4=1,0.00024,1,0.38 PL:DP:SP:GT:GQ 35,0,96:6:0:0/1:38 | |
| 7800 chr10 96100314 . A T,C 3.18 . DP=7;AF1=0.5428;CI95=0.5,1;DP4=0,1,0,3;MQ=46;PV4=1,1,0.0076,1 PL:DP:SP:GT:GQ 35,5,21,13,0,33:4:0:0/1:11 | |
| 7801 chr10 96113695 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 7802 chr10 96115989 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7803 chr10 96128273 . atgttgttg atgttg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7804 chr10 96145667 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7805 chr10 96175942 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7806 chr10 96212736 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 7807 chr10 96226801 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7808 chr10 96271298 . A C 59.5 . DP=25;AF1=1;CI95=0.5,1;DP4=1,0,8,0;MQ=48;PV4=1,1,0.13,1 PL:DP:SP:GT:GQ 92,12,0:9:0:1/1:72 | |
| 7809 chr10 96286878 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7810 chr10 96287808 . t tCATTGAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7811 chr10 96313960 . A C 18.6 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=50 PL:DP:SP:GT:GQ 51,12,0:4:0:1/1:72 | |
| 7812 chr10 96322545 . C CGTTACGT 7.39 . INDEL;DP=5;AF1=0.5063;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,16:2:0:0/1:19 | |
| 7813 chr10 96331224 . A G 31 . DP=6;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,3;MQ=48;PV4=1,0.0078,0.053,0.2 PL:DP:SP:GT:GQ 61,0,110:6:0:0/1:64 | |
| 7814 chr10 96332034 . gt gTCTCt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7815 chr10 96341328 . TA TAA 55.5 . INDEL;DP=10;AF1=0.5;CI95=0.5,0.5;DP4=0,6,0,4;MQ=50;PV4=1,1,1,0.38 PL:DP:SP:GT:GQ 93,0,104:10:0:0/1:96 | |
| 7816 chr10 96379382 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 7817 chr10 96390853 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7818 chr10 96405329 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 7819 chr10 96406066 . G A 13.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 7820 chr10 96410464 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7821 chr10 96435369 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 7822 chr10 96435435 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7823 chr10 96465550 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7824 chr10 96467514 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7825 chr10 96470938 . C A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 7826 chr10 96494038 . G GAC 4.42 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 40,0,44:2:0:0/1:42 | |
| 7827 chr10 96541557 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7828 chr10 96582547 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 7829 chr10 96612473 . A G 27 . DP=21;AF1=0.5;CI95=0.5,0.5;DP4=12,0,8,0;MQ=49;PV4=1,2.9e-12,0.26,0.36 PL:DP:SP:GT:GQ 57,0,226:20:0:0/1:60 | |
| 7830 chr10 96636440 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7831 chr10 96662632 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7832 chr10 96684820 . a aGTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7833 chr10 96702166 . AC ACGCC 3.25 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,1;MQ=50;PV4=1,1,1,0.33 PL:DP:SP:GT:GQ 38,0,114:4:0:0/1:41 | |
| 7834 chr10 96703864 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7835 chr10 96706774 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7836 chr10 96712735 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7837 chr10 96742001 . catatatatatat catatatatat 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 7838 chr10 96748873 . C T 25 . DP=13;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,4;MQ=48;PV4=1,3.2e-05,0.078,1 PL:DP:SP:GT:GQ 55,0,74:6:0:0/1:58 | |
| 7839 chr10 96757141 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7840 chr10 96786616 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7841 chr10 96793457 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7842 chr10 96797101 . T C 6.98 . DP=8;AF1=0.4999;CI95=0.5,0.5;DP4=0,4,0,2;MQ=49;PV4=1,0.14,6.2e-05,1 PL:DP:SP:GT:GQ 36,0,116:6:0:0/1:39 | |
| 7843 chr10 96802598 . A T 6.02 . DP=30;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 36,6,0:2:0:1/1:49 | |
| 7844 chr10 96807361 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 7845 chr10 96815113 . t tGCACCTCCCA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7846 chr10 96826946 . G A 22 . DP=26;AF1=0.5;CI95=0.5,0.5;DP4=16,1,6,0;MQ=49;PV4=1,0.012,0.0011,0.00013 PL:DP:SP:GT:GQ 52,0,234:23:0:0/1:55 | |
| 7847 chr10 96826966 . C T 20 . DP=20;AF1=0.5;CI95=0.5,0.5;DP4=5,1,3,1;MQ=49;PV4=1,0.2,0.15,1 PL:DP:SP:GT:GQ 50,0,94:10:0:0/1:53 | |
| 7848 chr10 96826966 . CTT CTTT 5.79 . INDEL;DP=20;AF1=0.5;CI95=0.5,0.5;DP4=1,1,1,1;MQ=50;PV4=1,0.37,1,0.084 PL:DP:SP:GT:GQ 42,0,45:4:0:0/1:43 | |
| 7849 chr10 96827178 . T C 90 . DP=23;AF1=1;CI95=1,1;DP4=0,0,0,13;MQ=48 PL:DP:SP:GT:GQ 123,39,0:13:0:1/1:99 | |
| 7850 chr10 96837694 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7851 chr10 96852800 . A ACC 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 7852 chr10 96857784 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7853 chr10 96879526 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7854 chr10 96893046 . G T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 7855 chr10 96904420 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7856 chr10 96918004 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7857 chr10 96937948 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7858 chr10 96954268 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7859 chr10 96960630 . ggaa g 9.05 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 7860 chr10 96966954 . GTTTTTTT GTTTTTT 6.75 . INDEL;DP=6;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=50 PL:DP:SP:GT:GQ 46,15,0:5:0:1/1:75 | |
| 7861 chr10 96970361 . A C 99 . DP=21;AF1=1;CI95=1,1;DP4=1,0,17,0;MQ=47;PV4=1,1,0.25,1 PL:DP:SP:GT:GQ 156,39,0:18:0:1/1:99 | |
| 7862 chr10 96970473 . CAA CA 17.6 . INDEL;DP=60;AF1=0.504;CI95=0.5,0.5;DP4=1,0,2,1;MQ=50;PV4=1,0.28,1,1 PL:DP:SP:GT:GQ 55,0,18:4:0:0/1:21 | |
| 7863 chr10 96970475 . A G 17.1 . DP=60;AF1=0.5004;CI95=0.5,0.5;DP4=1,1,0,3;MQ=48;PV4=0.4,1,0.087,1 PL:DP:SP:GT:GQ 47,0,28:5:0:0/1:31 | |
| 7864 chr10 96993966 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7865 chr10 97000834 . TGAG TG 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 7866 chr10 97002313 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7867 chr10 97009732 . C CTTTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7868 chr10 97028413 . A T 21.5 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=50 PL:DP:SP:GT:GQ 54,12,0:4:0:1/1:72 | |
| 7869 chr10 97042310 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7870 chr10 97055546 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7871 chr10 97072546 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 7872 chr10 97073612 . GCA GCACA 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 7873 chr10 97087071 . A ATC 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 7874 chr10 97090698 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 7875 chr10 97096639 . A T 6.2 . DP=28;AF1=0.4999;CI95=0.5,0.5;DP4=2,11,4,0;MQ=49;PV4=0.0063,0.0046,0.029,1 PL:DP:SP:GT:GQ 35,0,255:17:22:0/1:38 | |
| 7876 chr10 97098899 . T G 6.98 . DP=24;AF1=0.4999;CI95=0.5,0.5;DP4=0,15,6,0;MQ=50;PV4=1.8e-05,3.5e-06,0.0024,1 PL:DP:SP:GT:GQ 36,0,232:21:47:0/1:39 | |
| 7877 chr10 97116219 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7878 chr10 97116224 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 7879 chr10 97120000 . CCTTTA C 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 7880 chr10 97121968 . C T 46.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=43 PL:DP:SP:GT:GQ 78,6,0:2:0:1/1:49 | |
| 7881 chr10 97124890 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7882 chr10 97132996 . T A 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7883 chr10 97134613 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7884 chr10 97135534 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7885 chr10 97141523 . G A 99 . DP=36;AF1=1;CI95=1,1;DP4=1,0,3,28;MQ=49;PV4=0.13,0.27,0.28,1 PL:DP:SP:GT:GQ 163,73,0:32:0:1/1:99 | |
| 7886 chr10 97151112 . GCC G 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 7887 chr10 97154267 . A ATC 3.25 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=3,0,1,0;MQ=50;PV4=1,1,1,0.17 PL:DP:SP:GT:GQ 38,0,105:4:0:0/1:41 | |
| 7888 chr10 97154682 . A T 29.5 . DP=9;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=49 PL:DP:SP:GT:GQ 62,12,0:4:0:1/1:72 | |
| 7889 chr10 97158713 . G A 3.98 . DP=21;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 33,6,0:2:0:1/1:49 | |
| 7890 chr10 97166286 . A G 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7891 chr10 97170366 . G T 25 . DP=25;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=48 PL:DP:SP:GT:GQ 57,9,0:3:0:1/1:63 | |
| 7892 chr10 97174679 . T A 12.3 . DP=24;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,6;MQ=49;PV4=1,0.029,0.18,1 PL:DP:SP:GT:GQ 42,0,68:10:0:0/1:45 | |
| 7893 chr10 97191145 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7894 chr10 97195874 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 7895 chr10 97201424 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7896 chr10 97216384 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 7897 chr10 97239384 . T TCG 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 7898 chr10 97246585 . GT GTTGCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7899 chr10 97257546 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 7900 chr10 97265817 . T TAGGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7901 chr10 97267363 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 7902 chr10 97271201 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7903 chr10 97273170 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7904 chr10 97281432 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7905 chr10 97283021 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 7906 chr10 97285832 . c cCTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7907 chr10 97288849 . A T 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7908 chr10 97301410 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 7909 chr10 97317694 . CC CCAACATC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7910 chr10 97334741 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7911 chr10 97338599 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 7912 chr10 97366486 . T TGTGGG 3.25 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=3,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,110:4:0:0/1:41 | |
| 7913 chr10 97367582 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7914 chr10 97393475 . C T 38 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,5;MQ=48;PV4=1,0.0002,0.013,1 PL:DP:SP:GT:GQ 68,0,128:9:0:0/1:71 | |
| 7915 chr10 97424272 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7916 chr10 97424281 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7917 chr10 97427686 . C A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 7918 chr10 97427741 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7919 chr10 97438895 . GACAA GA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 7920 chr10 97440328 . G A 12.3 . DP=20;AF1=0.5;CI95=0.5,0.5;DP4=1,5,0,5;MQ=49;PV4=1,0.13,0.36,1 PL:DP:SP:GT:GQ 42,0,110:11:0:0/1:45 | |
| 7921 chr10 97447373 . A T 87 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=1,9,1,6;MQ=48;PV4=1,0.0014,0.00063,0.24 PL:DP:SP:GT:GQ 117,0,224:17:0:0/1:99 | |
| 7922 chr10 97449113 . tg tGTCCCCGGg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7923 chr10 97490997 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 7924 chr10 97498690 . g gAC 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 7925 chr10 97503250 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7926 chr10 97504376 . tca t 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 7927 chr10 97511047 . g gTT 4.42 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 7928 chr10 97518833 . GCAC GCACAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7929 chr10 97521796 . GTT GTTATT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7930 chr10 97570242 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7931 chr10 97593361 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7932 chr10 97605057 . C G 99 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=14,1,9,1;MQ=48;PV4=1,0.00011,5.8e-11,0.24 PL:DP:SP:GT:GQ 182,0,255:25:0:0/1:99 | |
| 7933 chr10 97607075 . C T 34 . DP=6;AF1=0.5;CI95=0.5,0.5;DP4=2,0,2,0;MQ=47;PV4=1,0.025,0,1 PL:DP:SP:GT:GQ 64,0,80:4:0:0/1:67 | |
| 7934 chr10 97636316 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7935 chr10 97636888 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7936 chr10 97647932 . g gTTCATCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7937 chr10 97649301 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7938 chr10 97670617 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7939 chr10 97687361 . gt gTt 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 7940 chr10 97700075 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7941 chr10 97718587 . a aTG 3.81 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 7942 chr10 97769858 . GTTCTT GTT 9.94 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 7943 chr10 97783290 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 7944 chr10 97816737 . T C 3.01 . DP=23;AF1=0.4997;CI95=0.5,0.5;DP4=3,9,4,0;MQ=49;PV4=0.019,0.086,0.026,1 PL:DP:SP:GT:GQ 30,0,218:16:17:0/1:33 | |
| 7945 chr10 97816749 . C G 39 . DP=27;AF1=0.5;CI95=0.5,0.5;DP4=7,2,0,7;MQ=49;PV4=0.0032,2.5e-05,0.00085,1 PL:DP:SP:GT:GQ 69,0,243:16:25:0/1:72 | |
| 7946 chr10 97832927 . C T 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 7947 chr10 97833858 . G GT 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 7948 chr10 97856374 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 7949 chr10 97881271 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7950 chr10 97973129 . gacaca gaca 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 7951 chr10 97976063 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7952 chr10 97992922 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 7953 chr10 98004262 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7954 chr10 98004532 . C T 10.2 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 41,6,0:2:0:1/1:49 | |
| 7955 chr10 98019842 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7956 chr10 98027458 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 7957 chr10 98030939 . C T 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 7958 chr10 98035816 . T TCG 5.08 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 7959 chr10 98039919 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7960 chr10 98075185 . ATT ATTACTT 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7961 chr10 98078127 . C T 29.5 . DP=9;AF1=1;CI95=0.5,1;DP4=0,0,1,3;MQ=49 PL:DP:SP:GT:GQ 62,12,0:4:0:1/1:72 | |
| 7962 chr10 98082385 . A G 14.2 . DP=8;AF1=0.5;CI95=0.5,0.5;DP4=4,0,3,0;MQ=48;PV4=1,0.076,0.068,0.16 PL:DP:SP:GT:GQ 44,0,112:7:0:0/1:47 | |
| 7963 chr10 98082517 . T G 5.29 . DP=10;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 35,6,0:2:0:1/1:49 | |
| 7964 chr10 98084231 . A G 30.3 . DP=28;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=49 PL:DP:SP:GT:GQ 63,15,0:5:0:1/1:75 | |
| 7965 chr10 98092034 . A T 17.8 . DP=11;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=46 PL:DP:SP:GT:GQ 49,6,0:2:0:1/1:49 | |
| 7966 chr10 98092421 . C A 8.64 . DP=21;AF1=0.5;CI95=0.5,0.5;DP4=0,5,0,4;MQ=46;PV4=1,0.062,0.00077,1 PL:DP:SP:GT:GQ 38,0,106:9:0:0/1:41 | |
| 7967 chr10 98092426 . G A 35 . DP=21;AF1=0.5002;CI95=0.5,0.5;DP4=0,2,0,4;MQ=45;PV4=1,1,0.033,1 PL:DP:SP:GT:GQ 65,0,31:6:0:0/1:34 | |
| 7968 chr10 98092427 . G A 39 . DP=22;AF1=0.5003;CI95=0.5,0.5;DP4=0,3,0,7;MQ=45;PV4=1,0.32,1,0.14 PL:DP:SP:GT:GQ 69,0,29:10:0:0/1:32 | |
| 7969 chr10 98098009 . T TGACGATGGC 3.25 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,99:4:0:0/1:41 | |
| 7970 chr10 98117339 . C G 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7971 chr10 98133264 . T G 8.44 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=45 PL:DP:SP:GT:GQ 39,6,0:2:0:1/1:49 | |
| 7972 chr10 98138685 . G T 4.13 . DP=8;AF1=0.5001;CI95=0.5,0.5;DP4=2,0,2,0;MQ=47;PV4=1,1,0.19,0.18 PL:DP:SP:GT:GQ 32,0,30:4:0:0/1:31 | |
| 7973 chr10 98142195 . caa c 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 7974 chr10 98144312 . G A 99 . DP=40;AF1=1;CI95=1,1;DP4=0,0,32,2;MQ=48 PL:DP:SP:GT:GQ 156,102,0:34:0:1/1:99 | |
| 7975 chr10 98155489 . G A 3.01 . DP=3;AF1=0.4997;CI95=0.5,0.5;DP4=2,0,1,0;MQ=48;PV4=1,0.13,0,1 PL:DP:SP:GT:GQ 30,0,83:3:0:0/1:33 | |
| 7976 chr10 98160078 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 7977 chr10 98170175 . T G 3.01 . DP=25;AF1=0.4997;CI95=0.5,0.5;DP4=2,5,1,5;MQ=49;PV4=1,0.29,0.074,0.28 PL:DP:SP:GT:GQ 30,0,101:13:0:0/1:33 | |
| 7978 chr10 98173778 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7979 chr10 98176784 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7980 chr10 98180078 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 7981 chr10 98191472 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7982 chr10 98192484 . G T 5.46 . DP=14;AF1=0.4999;CI95=0.5,0.5;DP4=5,0,3,0;MQ=49;PV4=1,0.098,0.0055,1 PL:DP:SP:GT:GQ 34,0,99:8:0:0/1:37 | |
| 7983 chr10 98202543 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7984 chr10 98221549 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7985 chr10 98221761 . G T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7986 chr10 98231966 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 7987 chr10 98237588 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7988 chr10 98239287 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7989 chr10 98239771 . tgag tGAGAgag 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7990 chr10 98240035 . A T 99 . DP=12;AF1=1;CI95=1,1;DP4=0,0,12,0;MQ=44 PL:DP:SP:GT:GQ 211,36,0:12:0:1/1:99 | |
| 7991 chr10 98245752 . A ACG 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 7992 chr10 98252399 . TC TCTTGCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7993 chr10 98253018 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 7994 chr10 98281981 . A C 15.1 . DP=6;AF1=0.5;CI95=0.5,0.5;DP4=1,0,3,0;MQ=48;PV4=1,0.0039,0.22,0.12 PL:DP:SP:GT:GQ 45,0,38:4:0:0/1:40 | |
| 7995 chr10 98281987 . A C 8.33 . DP=6;AF1=0.5939;CI95=0.5,1;DP4=1,0,2,0;MQ=47;PV4=1,1,0.061,0.064 PL:DP:SP:GT:GQ 37,0,5:3:0:0/1:7 | |
| 7996 chr10 98287094 . T A 6.79 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=49 PL:DP:SP:GT:GQ 37,6,0:2:0:1/1:49 | |
| 7997 chr10 98291531 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 7998 chr10 98315468 . A AGTGGCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 7999 chr10 98317036 . c cAACTCCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8000 chr10 98324964 . C T 42 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=2,0,7,0;MQ=49;PV4=1,0.00017,0.29,0.26 PL:DP:SP:GT:GQ 72,0,66:9:0:0/1:68 | |
| 8001 chr10 98367384 . C T 19.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 51,6,0:2:0:1/1:49 | |
| 8002 chr10 98371147 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 8003 chr10 98380115 . G C 5.46 . DP=23;AF1=0.4999;CI95=0.5,0.5;DP4=3,1,5,0;MQ=49;PV4=0.44,0.15,0.073,1 PL:DP:SP:GT:GQ 34,0,77:9:0:0/1:37 | |
| 8004 chr10 98380277 . C T 21 . DP=23;AF1=0.5;CI95=0.5,0.5;DP4=6,5,0,6;MQ=49;PV4=0.043,2e-05,0.0069,1 PL:DP:SP:GT:GQ 51,0,255:17:14:0/1:54 | |
| 8005 chr10 98380363 . A G 73 . DP=8;AF1=1;CI95=1,1;DP4=0,0,0,8;MQ=48 PL:DP:SP:GT:GQ 106,24,0:8:0:1/1:96 | |
| 8006 chr10 98381212 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8007 chr10 98384456 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8008 chr10 98410947 . A C 27 . DP=15;AF1=0.502;CI95=0.5,0.5;DP4=2,0,4,0;MQ=46;PV4=1,1,1,0.37 PL:DP:SP:GT:GQ 57,0,21:6:0:0/1:24 | |
| 8009 chr10 98414381 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8010 chr10 98416486 . GC GCGTACTC 7.35 . INDEL;DP=6;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 8011 chr10 98432876 . G GCGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8012 chr10 98436534 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8013 chr10 98450014 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8014 chr10 98464131 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8015 chr10 98466206 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 8016 chr10 98515648 . g gGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8017 chr10 98561360 . A T 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8018 chr10 98569703 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8019 chr10 98598856 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8020 chr10 98604068 . T A 8.02 . DP=2;AF1=0.5335;CI95=0.5,1;DP4=1,0,0,1;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,9:2:0:0/1:12 | |
| 8021 chr10 98611289 . gt gTAGAGAGAt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8022 chr10 98622102 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8023 chr10 98655362 . tg tGTCTGg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8024 chr10 98661061 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 8025 chr10 98661472 . A T 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8026 chr10 98672627 . G T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8027 chr10 98678381 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8028 chr10 98693793 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8029 chr10 98727346 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8030 chr10 98731280 . G C 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,0,1;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 8031 chr10 98733548 . AA AATA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8032 chr10 98747664 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 8033 chr10 98762447 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8034 chr10 98763767 . CT CTGGTAGAAAGAT 7.35 . INDEL;DP=7;AF1=0.5008;CI95=0.5,0.5;DP4=1,0,1,0;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,25:2:0:0/1:28 | |
| 8035 chr10 98763771 . T A 10.2 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 41,6,0:2:0:1/1:49 | |
| 8036 chr10 98763778 . C A,T 10.2 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=37 PL:DP:SP:GT:GQ 56,21,40,15,0,40:3:0:1/1:49 | |
| 8037 chr10 98780793 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8038 chr10 98792575 . g gAAAGATA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8039 chr10 98803501 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8040 chr10 98811072 . a aGGCAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8041 chr10 98813917 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 8042 chr10 98828690 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8043 chr10 98833452 . C A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 8044 chr10 98833953 . tc tCCc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8045 chr10 98838945 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8046 chr10 98843710 . C CGA 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 8047 chr10 98844136 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 8048 chr10 98851691 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8049 chr10 98875369 . CC CCTATAGGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8050 chr10 98882582 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8051 chr10 98886334 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 8052 chr10 98895928 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8053 chr10 98916500 . CT CTCAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8054 chr10 98916603 . TA TAA 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 8055 chr10 98948760 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8056 chr10 98949053 . T C 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 8057 chr10 98949683 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8058 chr10 98950121 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8059 chr10 98959278 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8060 chr10 98974338 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8061 chr10 98975923 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8062 chr10 98979771 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8063 chr10 98983147 . A C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 8064 chr10 98988999 . G A 22 . DP=36;AF1=0.5;CI95=0.5,0.5;DP4=0,21,0,14;MQ=50;PV4=1,4.4e-15,0.11,1 PL:DP:SP:GT:GQ 52,0,245:35:0:0/1:55 | |
| 8065 chr10 99019177 . A G 66 . DP=35;AF1=0.5;CI95=0.5,0.5;DP4=14,8,7,3;MQ=49;PV4=1,9e-09,7.6e-05,0.43 PL:DP:SP:GT:GQ 96,0,255:32:0:0/1:99 | |
| 8066 chr10 99024073 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8067 chr10 99034811 . A T 10.4 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 8068 chr10 99054045 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8069 chr10 99062169 . C T 3.01 . DP=4;AF1=0.4997;CI95=0.5,0.5;DP4=3,0,0,1;MQ=48;PV4=0.25,0.0089,0,1 PL:DP:SP:GT:GQ 30,0,114:4:0:0/1:33 | |
| 8070 chr10 99067590 . C A 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 8071 chr10 99116962 . C G 4.13 . DP=13;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,2;MQ=48;PV4=1,1,0.019,1 PL:DP:SP:GT:GQ 32,0,32:4:0:0/1:32 | |
| 8072 chr10 99126249 . G A 99 . DP=64;AF1=0.5;CI95=0.5,0.5;DP4=14,15,14,13;MQ=47;PV4=1,2.5e-05,2.3e-24,1 PL:DP:SP:GT:GQ 255,0,255:56:0:0/1:99 | |
| 8073 chr10 99129198 . T G 8.64 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=10,2,0,4;MQ=49;PV4=0.0082,0.0032,5.3e-07,1 PL:DP:SP:GT:GQ 38,0,255:16:21:0/1:41 | |
| 8074 chr10 99129862 . G C 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8075 chr10 99129996 . CAG CAGAG 12.7 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8076 chr10 99141484 . C T 73 . DP=29;AF1=0.5;CI95=0.5,0.5;DP4=11,0,12,2;MQ=49;PV4=0.49,6.5e-07,0.41,0.46 PL:DP:SP:GT:GQ 103,0,198:25:3:0/1:99 | |
| 8077 chr10 99160152 . A G 38 . DP=28;AF1=0.5;CI95=0.5,0.5;DP4=10,9,2,5;MQ=49;PV4=0.39,9.8e-07,1.1e-11,1 PL:DP:SP:GT:GQ 68,0,255:26:4:0/1:71 | |
| 8078 chr10 99171366 . GTGTCTA G 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8079 chr10 99180826 . tg tGCGg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8080 chr10 99188202 . T A 3.01 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,30:2:0:0/1:30 | |
| 8081 chr10 99191050 . tg tGAGCCACAg 12.7 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8082 chr10 99196253 . A G 9.52 . DP=36;AF1=0.5;CI95=0.5,0.5;DP4=13,6,0,6;MQ=49;PV4=0.0052,0.0071,0.0007,0.023 PL:DP:SP:GT:GQ 39,0,255:25:23:0/1:42 | |
| 8083 chr10 99212797 . G GCTC 5.08 . INDEL;DP=6;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,1,1,0.23 PL:DP:SP:GT:GQ 41,0,83:3:0:0/1:44 | |
| 8084 chr10 99251521 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8085 chr10 99252949 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8086 chr10 99273405 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 8087 chr10 99282410 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8088 chr10 99286374 . CT CTTT 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 8089 chr10 99291535 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 8090 chr10 99291946 . TCTGCC TC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8091 chr10 99328543 . aag a 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 8092 chr10 99332449 . TTG TTGTG 5.08 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,1,1,0.46 PL:DP:SP:GT:GQ 41,0,76:3:0:0/1:44 | |
| 8093 chr10 99334684 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8094 chr10 99340540 . C A 10.2 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 41,6,0:2:0:1/1:49 | |
| 8095 chr10 99340837 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 8096 chr10 99341185 . A G 42 . DP=26;AF1=0.5;CI95=0.5,0.5;DP4=0,12,1,10;MQ=50;PV4=0.48,6e-10,0.093,1 PL:DP:SP:GT:GQ 72,0,219:23:0:0/1:75 | |
| 8097 chr10 99342907 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8098 chr10 99345573 . T G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 8099 chr10 99349387 . A T 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,1;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 8100 chr10 99363873 . c cAT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 8101 chr10 99376256 . C A 11.3 . DP=4;AF1=0.5005;CI95=0.5,0.5;DP4=0,1,0,2;MQ=47;PV4=1,0.17,0.23,1 PL:DP:SP:GT:GQ 41,0,27:3:0:0/1:30 | |
| 8102 chr10 99412543 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8103 chr10 99412560 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8104 chr10 99416911 . CA CATTTGA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8105 chr10 99417126 . AA AAGACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8106 chr10 99422648 . A G 38 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=8,0,9,0;MQ=49;PV4=1,3.6e-05,0.22,1 PL:DP:SP:GT:GQ 68,0,178:17:0:0/1:71 | |
| 8107 chr10 99432126 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8108 chr10 99435730 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 8109 chr10 99454757 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8110 chr10 99461214 . CT CTAT 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 8111 chr10 99466154 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8112 chr10 99468993 . C G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 8113 chr10 99478784 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 8114 chr10 99486923 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8115 chr10 99490133 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 8116 chr10 99493816 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8117 chr10 99507982 . A T 3.01 . DP=12;AF1=0.4997;CI95=0.5,0.5;DP4=9,0,2,0;MQ=49;PV4=1,0.25,0.00064,0.096 PL:DP:SP:GT:GQ 30,0,182:11:0:0/1:33 | |
| 8118 chr10 99508232 . C G 16.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=46 PL:DP:SP:GT:GQ 48,6,0:2:0:1/1:49 | |
| 8119 chr10 99509969 . T C 32.5 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=49 PL:DP:SP:GT:GQ 65,12,0:4:0:1/1:72 | |
| 8120 chr10 99516955 . G A 50 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=2,0,4,0;MQ=47;PV4=1,0.13,0.1,1 PL:DP:SP:GT:GQ 80,0,59:6:0:0/1:62 | |
| 8121 chr10 99517355 . A G 61 . DP=11;AF1=0.5;CI95=0.5,0.5;DP4=5,0,5,0;MQ=47;PV4=1,0.017,2.4e-05,0.28 PL:DP:SP:GT:GQ 91,0,138:10:0:0/1:94 | |
| 8122 chr10 99517624 . G T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 8123 chr10 99519097 . A G 37 . DP=25;AF1=0.5006;CI95=0.5,0.5;DP4=0,1,0,7;MQ=49;PV4=1,0.00014,0.25,0.35 PL:DP:SP:GT:GQ 67,0,26:8:0:0/1:29 | |
| 8124 chr10 99549707 . CT CTCTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8125 chr10 99566336 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 8126 chr10 99569056 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8127 chr10 99574757 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8128 chr10 99586565 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8129 chr10 99588280 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8130 chr10 99598578 . T G 5.46 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 8131 chr10 99620392 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8132 chr10 99622734 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8133 chr10 99638345 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8134 chr10 99642400 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8135 chr10 99644781 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 8136 chr10 99681723 . TGA T 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 8137 chr10 99682170 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 8138 chr10 99682981 . T C 55 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=7,3,6,0;MQ=49;PV4=0.25,6.6e-05,0.00081,1 PL:DP:SP:GT:GQ 85,0,255:16:6:0/1:88 | |
| 8139 chr10 99691961 . GCC G 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 8140 chr10 99697168 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8141 chr10 99698081 . TTG TTGTG 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 8142 chr10 99698775 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8143 chr10 99701552 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 8144 chr10 99742965 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8145 chr10 99757320 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 8146 chr10 99759044 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8147 chr10 99764607 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8148 chr10 99766391 . C T 6.2 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,44:2:0:0/1:37 | |
| 8149 chr10 99774957 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8150 chr10 99806044 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8151 chr10 99811773 . T TC 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8152 chr10 99822161 . T TCCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8153 chr10 99837137 . C T 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 8154 chr10 99899667 . AG AGGG 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 8155 chr10 99920935 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8156 chr10 99946989 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8157 chr10 99969390 . A C 60.5 . DP=45;AF1=0.9998;CI95=0.5,1;DP4=0,1,2,6;MQ=49;PV4=1,0.16,0.29,1 PL:DP:SP:GT:GQ 90,2,0:9:0:1/1:37 | |
| 8158 chr10 99969568 . A G 99 . DP=64;AF1=1;CI95=1,1;DP4=0,1,28,22;MQ=50;PV4=0.45,0.0011,0.41,1 PL:DP:SP:GT:GQ 163,122,0:51:0:1/1:99 | |
| 8159 chr10 99977780 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8160 chr10 99984834 . t tTAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8161 chr10 99985293 . G A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 8162 chr10 99991408 . A G 99 . DP=34;AF1=1;CI95=1,1;DP4=0,0,10,18;MQ=46 PL:DP:SP:GT:GQ 255,84,0:28:0:1/1:99 | |
| 8163 chr10 100008493 . G GAT 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 8164 chr10 100011442 . C T 99 . DP=28;AF1=1;CI95=1,1;DP4=0,1,8,14;MQ=48;PV4=1,1,0.25,1 PL:DP:SP:GT:GQ 231,50,0:23:0:1/1:99 | |
| 8165 chr10 100012520 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8166 chr10 100016396 . C G 6.2 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,44:2:0:0/1:37 | |
| 8167 chr10 100017500 . G A 28.5 . DP=26;AF1=1;CI95=0.5,1;DP4=0,0,1,3;MQ=50 PL:DP:SP:GT:GQ 61,12,0:4:0:1/1:72 | |
| 8168 chr10 100019039 . G T 36 . DP=14;AF1=1;CI95=0.5,1;DP4=0,0,1,2;MQ=47 PL:DP:SP:GT:GQ 68,9,0:3:0:1/1:63 | |
| 8169 chr10 100019227 . GAA GAAAAA 5.08 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,1,1,0.042 PL:DP:SP:GT:GQ 41,0,83:3:0:0/1:44 | |
| 8170 chr10 100020577 . C CAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8171 chr10 100021842 . G T 99 . DP=20;AF1=1;CI95=1,1;DP4=0,0,14,2;MQ=47 PL:DP:SP:GT:GQ 194,48,0:16:0:1/1:99 | |
| 8172 chr10 100021875 . AG ACTTTCCTTG 7.69 . INDEL;DP=14;AF1=0.5554;CI95=0.5,1;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,7:2:0:0/1:10 | |
| 8173 chr10 100022446 . A G 7.59 . DP=17;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 38,6,0:2:0:1/1:49 | |
| 8174 chr10 100025238 . G A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 8175 chr10 100029075 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8176 chr10 100035584 . T TCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8177 chr10 100042312 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8178 chr10 100046249 . G A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 8179 chr10 100046410 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8180 chr10 100080238 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 8181 chr10 100090091 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8182 chr10 100101950 . C G 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8183 chr10 100104711 . G A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 8184 chr10 100113281 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8185 chr10 100129890 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8186 chr10 100134868 . CTCCAG C 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8187 chr10 100144782 . C T 77 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=1,3,2,5;MQ=48;PV4=1,5.7e-07,0.051,1 PL:DP:SP:GT:GQ 107,0,146:11:0:0/1:99 | |
| 8188 chr10 100146895 . T C 36 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=8,0,5,0;MQ=49;PV4=1,9.2e-05,0.029,1 PL:DP:SP:GT:GQ 66,0,194:13:0:0/1:69 | |
| 8189 chr10 100147097 . G A 8.64 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=0,10,0,6;MQ=50;PV4=1,1.7e-07,1,1 PL:DP:SP:GT:GQ 38,0,212:16:0:0/1:41 | |
| 8190 chr10 100148176 . A G 99 . DP=18;AF1=1;CI95=1,1;DP4=0,0,5,10;MQ=48 PL:DP:SP:GT:GQ 232,45,0:15:0:1/1:99 | |
| 8191 chr10 100155100 . A G 3.01 . DP=29;AF1=0.4997;CI95=0.5,0.5;DP4=2,9,0,4;MQ=49;PV4=1,0.0018,0.00031,1 PL:DP:SP:GT:GQ 30,0,255:15:0:0/1:33 | |
| 8192 chr10 100155110 . C A 20 . DP=24;AF1=0.5;CI95=0.5,0.5;DP4=2,4,0,5;MQ=48;PV4=0.45,0.11,1,1 PL:DP:SP:GT:GQ 50,0,136:11:3:0/1:53 | |
| 8193 chr10 100161936 . C G 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 8194 chr10 100162639 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8195 chr10 100167396 . G A 99 . DP=25;AF1=1;CI95=1,1;DP4=0,0,6,14;MQ=48 PL:DP:SP:GT:GQ 225,60,0:20:0:1/1:99 | |
| 8196 chr10 100167466 . G A 7.8 . DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 8197 chr10 100167605 . G A 6.25 . DP=6;AF1=0.508;CI95=0.5,0.5;DP4=0,1,2,0;MQ=48;PV4=0.33,0.46,1,1 PL:DP:SP:GT:GQ 35,0,15:3:0:0/1:18 | |
| 8198 chr10 100170762 . C T 88.1 . DP=8;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=46 PL:DP:SP:GT:GQ 121,21,0:7:0:1/1:84 | |
| 8199 chr10 100174721 . T C 32 . DP=25;AF1=0.5016;CI95=0.5,0.5;DP4=0,1,7,0;MQ=48;PV4=0.12,0.00023,1,1 PL:DP:SP:GT:GQ 62,0,22:8:0:0/1:25 | |
| 8200 chr10 100183774 . A G 25.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=46 PL:DP:SP:GT:GQ 57,6,0:2:0:1/1:49 | |
| 8201 chr10 100186052 . G GATGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8202 chr10 100190825 . GGCCA G 12.7 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8203 chr10 100194654 . G C 6.02 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 36,6,0:2:0:1/1:49 | |
| 8204 chr10 100197458 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8205 chr10 100204104 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8206 chr10 100207347 . T G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8207 chr10 100219181 . G T 26.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=45 PL:DP:SP:GT:GQ 58,6,0:2:0:1/1:49 | |
| 8208 chr10 100219314 . G A 58 . DP=27;AF1=0.5;CI95=0.5,0.5;DP4=11,6,8,1;MQ=49;PV4=0.36,8.1e-07,1.1e-10,0.43 PL:DP:SP:GT:GQ 88,0,255:26:4:0/1:91 | |
| 8209 chr10 100219418 . C T 5.46 . DP=20;AF1=0.4999;CI95=0.5,0.5;DP4=2,4,0,3;MQ=49;PV4=0.5,1,0.02,0.3 PL:DP:SP:GT:GQ 34,0,87:9:3:0/1:37 | |
| 8210 chr10 100222916 . c cCTAA 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 8211 chr10 100225106 . T C 6.98 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,37:2:0:0/1:36 | |
| 8212 chr10 100225158 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8213 chr10 100256953 . a aAAACG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8214 chr10 100261706 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8215 chr10 100266995 . ga gATGAGCCa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8216 chr10 100284722 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8217 chr10 100320357 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8218 chr10 100327505 . Ggtgtgtgtgtgtgtgtgtgtgtgt Ggtgtgtgtgtgtgtgtgtgtgt 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 8219 chr10 100331316 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8220 chr10 100335914 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8221 chr10 100337976 . TCT TCTGACT 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 8222 chr10 100378299 . A G 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 8223 chr10 100433118 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 8224 chr10 100439550 . G T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8225 chr10 100490197 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8226 chr10 100509183 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 8227 chr10 100517911 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 8228 chr10 100540368 . A ACAGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8229 chr10 100568024 . t tCTGCCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8230 chr10 100582488 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8231 chr10 100612058 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8232 chr10 100614435 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8233 chr10 100622328 . T A 12 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 43,6,0:2:0:1/1:49 | |
| 8234 chr10 100623873 . AT ATTTCTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8235 chr10 100627719 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 8236 chr10 100645380 . C G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 8237 chr10 100676579 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 8238 chr10 100679771 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8239 chr10 100680084 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8240 chr10 100685966 . GT GTTTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8241 chr10 100714451 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8242 chr10 100739536 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8243 chr10 100772817 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8244 chr10 100788977 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 8245 chr10 100810611 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 8246 chr10 100814446 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8247 chr10 100850772 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8248 chr10 100876435 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8249 chr10 100889894 . a aGGAGCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8250 chr10 100904545 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8251 chr10 100943950 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 8252 chr10 100944831 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8253 chr10 100952892 . gt gTCCTt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8254 chr10 100961769 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 8255 chr10 100976868 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8256 chr10 100992327 . A T 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,38:2:0:0/1:32 | |
| 8257 chr10 101012083 . a aAGGGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8258 chr10 101030107 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 8259 chr10 101058811 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8260 chr10 101082221 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8261 chr10 101091419 . t tC 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 8262 chr10 101097611 . TA TAA 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8263 chr10 101104508 . T G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 8264 chr10 101109394 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 8265 chr10 101109726 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8266 chr10 101113124 . aat a 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8267 chr10 101121979 . T G 11.3 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 8268 chr10 101125902 . A G 11.1 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=39 PL:DP:SP:GT:GQ 42,6,0:2:0:1/1:49 | |
| 8269 chr10 101131277 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 8270 chr10 101134712 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 8271 chr10 101144927 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8272 chr10 101148554 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 8273 chr10 101225431 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 8274 chr10 101262255 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8275 chr10 101263534 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8276 chr10 101265875 . C A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 8277 chr10 101283091 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8278 chr10 101293291 . T C 5.46 . DP=3;AF1=0.4999;CI95=0.5,0.5;DP4=1,1,0,1;MQ=48;PV4=1,0.43,0,1 PL:DP:SP:GT:GQ 34,0,82:3:0:0/1:37 | |
| 8279 chr10 101305543 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8280 chr10 101314380 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8281 chr10 101324616 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8282 chr10 101337739 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8283 chr10 101353702 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8284 chr10 101353707 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8285 chr10 101363212 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8286 chr10 101369839 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 8287 chr10 101371498 . C CTA 7.57 . INDEL;DP=2;AF1=0.5336;CI95=0.5,1;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,9:2:0:0/1:12 | |
| 8288 chr10 101384998 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8289 chr10 101419863 . C T 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 8290 chr10 101422518 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 8291 chr10 101457320 . A AAGC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 8292 chr10 101464082 . T A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 8293 chr10 101466569 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 8294 chr10 101467276 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8295 chr10 101476227 . A G 11.3 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,3;MQ=47;PV4=1,0.23,0.3,0.42 PL:DP:SP:GT:GQ 41,0,43:5:0:0/1:42 | |
| 8296 chr10 101476947 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 8297 chr10 101495928 . T C 31 . DP=10;AF1=0.5;CI95=0.5,0.5;DP4=4,0,4,0;MQ=48;PV4=1,1.4e-05,0.00021,1 PL:DP:SP:GT:GQ 61,0,134:8:0:0/1:64 | |
| 8298 chr10 101497130 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 8299 chr10 101544447 . A T 99 . DP=61;AF1=1;CI95=1,1;DP4=0,0,6,7;MQ=48 PL:DP:SP:GT:GQ 176,39,0:13:0:1/1:99 | |
| 8300 chr10 101560009 . C G 6.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 8301 chr10 101569801 . G GCA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 8302 chr10 101577018 . G A 29 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=9,0,5,0;MQ=49;PV4=1,7.4e-05,2.9e-08,1 PL:DP:SP:GT:GQ 59,0,203:14:0:0/1:62 | |
| 8303 chr10 101590293 . C T 3.01 . DP=10;AF1=0.4997;CI95=0.5,0.5;DP4=0,6,0,4;MQ=50;PV4=1,2.7e-05,1,1 PL:DP:SP:GT:GQ 30,0,170:10:0:0/1:33 | |
| 8304 chr10 101591944 . T C 89 . DP=16;AF1=1;CI95=1,1;DP4=0,0,0,12;MQ=48 PL:DP:SP:GT:GQ 122,36,0:12:0:1/1:99 | |
| 8305 chr10 101595692 . A G 13.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 8306 chr10 101596043 . A C 5.46 . DP=35;AF1=0.4999;CI95=0.5,0.5;DP4=7,9,0,5;MQ=49;PV4=0.12,0.0062,2.8e-05,1 PL:DP:SP:GT:GQ 34,0,255:21:9:0/1:37 | |
| 8307 chr10 101617938 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8308 chr10 101639905 . T A 30 . DP=26;AF1=0.5;CI95=0.5,0.5;DP4=0,7,0,7;MQ=49;PV4=1,0.089,0.0044,0.26 PL:DP:SP:GT:GQ 60,0,81:14:0:0/1:63 | |
| 8309 chr10 101645498 . T C 99 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=5,4,4,1;MQ=48;PV4=0.58,0.48,0,1 PL:DP:SP:GT:GQ 138,0,255:14:2:0/1:99 | |
| 8310 chr10 101650943 . c cCCG 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 8311 chr10 101654696 . T C 99 . DP=27;AF1=0.5;CI95=0.5,0.5;DP4=8,3,13,1;MQ=48;PV4=0.29,1.4e-06,4.8e-09,1 PL:DP:SP:GT:GQ 142,0,255:25:5:0/1:99 | |
| 8312 chr10 101656372 . C CTCCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8313 chr10 101659874 . T C 37 . DP=23;AF1=0.5;CI95=0.5,0.5;DP4=0,13,0,7;MQ=49;PV4=1,0.00021,0.00064,1 PL:DP:SP:GT:GQ 67,0,221:20:0:0/1:70 | |
| 8314 chr10 101663138 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8315 chr10 101666272 . tc tCGCTACCGc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8316 chr10 101667624 . C A 3.01 . DP=4;AF1=0.4997;CI95=0.5,0.5;DP4=1,1,2,0;MQ=49;PV4=1,0.15,0.21,1 PL:DP:SP:GT:GQ 30,0,66:4:0:0/1:33 | |
| 8317 chr10 101667978 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8318 chr10 101671171 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 8319 chr10 101686925 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 8320 chr10 101690097 . A AAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8321 chr10 101699134 . gt gTACt 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 8322 chr10 101733941 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8323 chr10 101741568 . ag aGTTGg 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 8324 chr10 101745905 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8325 chr10 101759619 . AGT AGTGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8326 chr10 101777728 . T C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 8327 chr10 101834986 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 8328 chr10 101874506 . T C 4.13 . DP=9;AF1=0.4999;CI95=0.5,0.5;DP4=0,2,1,2;MQ=47;PV4=1,0.15,1,1 PL:DP:SP:GT:GQ 32,0,34:5:0:0/1:33 | |
| 8329 chr10 101898496 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8330 chr10 101899806 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 8331 chr10 101947888 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 8332 chr10 101953901 . A C 4.13 . DP=8;AF1=0.4998;CI95=0.5,0.5;DP4=1,2,0,2;MQ=48;PV4=1,0.15,0.0034,0.15 PL:DP:SP:GT:GQ 32,0,97:5:0:0/1:35 | |
| 8333 chr10 101954153 . TTC TTCCCCTC 5.08 . INDEL;DP=9;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,1,1,0.4 PL:DP:SP:GT:GQ 41,0,83:3:0:0/1:44 | |
| 8334 chr10 101971614 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 8335 chr10 101977883 . C T 31.1 . DP=21;AF1=0.5129;CI95=0.5,0.5;DP4=0,1,1,3;MQ=48;PV4=1,0.15,0.29,1 PL:DP:SP:GT:GQ 61,0,13:5:0:0/1:16 | |
| 8336 chr10 101981880 . AGT ACCGGCGT,A 9.94 . INDEL;DP=5;AF1=0.9999;CI95=0.5,1;DP4=0,0,2,0;MQ=50 PL:DP:SP:GT:GQ 56,12,47,9,0,44:2:0:1/1:41 | |
| 8337 chr10 101995473 . C G 5.46 . DP=17;AF1=0.4999;CI95=0.5,0.5;DP4=1,2,0,2;MQ=48;PV4=1,1,0.12,1 PL:DP:SP:GT:GQ 34,0,60:5:0:0/1:37 | |
| 8338 chr10 101996787 . C G 38 . DP=26;AF1=0.5;CI95=0.5,0.5;DP4=1,3,0,5;MQ=47;PV4=0.44,0.41,0.023,1 PL:DP:SP:GT:GQ 68,0,71:9:0:0/1:69 | |
| 8339 chr10 102000284 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 8340 chr10 102004008 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8341 chr10 102016044 . C T 43.3 . DP=11;AF1=1;CI95=0.5,1;DP4=0,0,2,3;MQ=50 PL:DP:SP:GT:GQ 76,15,0:5:0:1/1:75 | |
| 8342 chr10 102022345 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 8343 chr10 102027447 . C T 38 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=0,16,0,7;MQ=49;PV4=1,1.4e-07,0.00013,1 PL:DP:SP:GT:GQ 68,0,237:23:0:0/1:71 | |
| 8344 chr10 102039547 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8345 chr10 102050347 . T C 17.1 . DP=16;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=49 PL:DP:SP:GT:GQ 49,9,0:3:0:1/1:63 | |
| 8346 chr10 102054602 . T C 38 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,1,2;MQ=48 PL:DP:SP:GT:GQ 70,9,0:3:0:1/1:63 | |
| 8347 chr10 102057005 . G A 99 . DP=30;AF1=1;CI95=1,1;DP4=0,0,0,27;MQ=46 PL:DP:SP:GT:GQ 189,81,0:27:0:1/1:99 | |
| 8348 chr10 102057786 . T TTCCCC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 8349 chr10 102063358 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 8350 chr10 102071721 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 8351 chr10 102071949 . A G 10.4 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 8352 chr10 102076967 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8353 chr10 102087113 . G T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 8354 chr10 102087589 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8355 chr10 102100925 . T TA 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8356 chr10 102107276 . G GTACGTGT 7.46 . INDEL;DP=4;AF1=0.5163;CI95=0.5,1;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,12:2:0:0/1:15 | |
| 8357 chr10 102107933 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8358 chr10 102109988 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8359 chr10 102114201 . G A 22 . DP=20;AF1=0.5;CI95=0.5,0.5;DP4=2,3,6,0;MQ=48;PV4=0.061,0.016,0.0027,0.1 PL:DP:SP:GT:GQ 52,0,144:11:12:0/1:55 | |
| 8360 chr10 102116339 . T A 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 8361 chr10 102122559 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 8362 chr10 102136889 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 8363 chr10 102163243 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 8364 chr10 102193191 . A ATCTCGTCTCAC 12.7 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8365 chr10 102206904 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8366 chr10 102211581 . aa aAACa 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 8367 chr10 102223225 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 8368 chr10 102247769 . G C 3.01 . DP=12;AF1=0.4998;CI95=0.5,0.5;DP4=3,0,2,0;MQ=48;PV4=1,0.38,0.1,1 PL:DP:SP:GT:GQ 30,0,53:5:0:0/1:33 | |
| 8369 chr10 102257371 . G C 17.1 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=4,2,4,0;MQ=48;PV4=0.47,0.17,0.0037,1 PL:DP:SP:GT:GQ 47,0,111:10:3:0/1:50 | |
| 8370 chr10 102267312 . C G 24 . DP=35;AF1=0.5;CI95=0.5,0.5;DP4=4,5,0,6;MQ=49;PV4=0.1,0.006,0.15,1 PL:DP:SP:GT:GQ 54,0,224:15:10:0/1:57 | |
| 8371 chr10 102306228 . CG CGGGG 7.35 . INDEL;DP=6;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 8372 chr10 102331059 . tgtgcg t 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8373 chr10 102377788 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8374 chr10 102414448 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8375 chr10 102425382 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8376 chr10 102429919 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8377 chr10 102442535 . AG AGCG 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 8378 chr10 102464239 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8379 chr10 102470729 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8380 chr10 102479397 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8381 chr10 102517232 . T G 8.67 . DP=4;AF1=0.5031;CI95=0.5,0.5;DP4=0,1,0,2;MQ=46;PV4=1,0.38,0.31,0 PL:DP:SP:GT:GQ 38,0,19:3:0:0/1:22 | |
| 8382 chr10 102524755 . G T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 8383 chr10 102526250 . G A 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 8384 chr10 102533787 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8385 chr10 102534814 . T A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 8386 chr10 102535058 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 8387 chr10 102539375 . C CTGAA 3.25 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,1;MQ=50;PV4=1,1,1,0.35 PL:DP:SP:GT:GQ 38,0,103:4:0:0/1:41 | |
| 8388 chr10 102549704 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8389 chr10 102552019 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8390 chr10 102568630 . T A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 8391 chr10 102568826 . G A 51 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=4,0,5,0;MQ=48;PV4=1,7.6e-05,0.023,0.25 PL:DP:SP:GT:GQ 81,0,132:9:0:0/1:84 | |
| 8392 chr10 102572648 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8393 chr10 102575767 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8394 chr10 102592150 . A G 35.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=44 PL:DP:SP:GT:GQ 67,6,0:2:0:1/1:49 | |
| 8395 chr10 102608375 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8396 chr10 102615458 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8397 chr10 102618725 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8398 chr10 102619121 . T A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 8399 chr10 102625067 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8400 chr10 102625362 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 8401 chr10 102627951 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8402 chr10 102632094 . AAGGGAGG AAGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8403 chr10 102639664 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8404 chr10 102650299 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8405 chr10 102668270 . C A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 8406 chr10 102701234 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8407 chr10 102703881 . T G 3.01 . DP=13;AF1=0.4997;CI95=0.5,0.5;DP4=0,6,0,3;MQ=49;PV4=1,4.8e-05,0.44,1 PL:DP:SP:GT:GQ 30,0,74:9:0:0/1:33 | |
| 8408 chr10 102716322 . T C 5.29 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=44 PL:DP:SP:GT:GQ 35,6,0:2:0:1/1:49 | |
| 8409 chr10 102722983 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8410 chr10 102742989 . G C 38.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=38 PL:DP:SP:GT:GQ 70,6,0:2:0:1/1:49 | |
| 8411 chr10 102743792 . A T 13 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=43 PL:DP:SP:GT:GQ 44,6,0:2:0:1/1:49 | |
| 8412 chr10 102749341 . A G 18.1 . DP=30;AF1=0.5;CI95=0.5,0.5;DP4=12,1,12,0;MQ=50;PV4=1,5.7e-27,0.15,1 PL:DP:SP:GT:GQ 48,0,255:25:0:0/1:51 | |
| 8413 chr10 102778125 . g gTCCCGCCCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8414 chr10 102780195 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8415 chr10 102780312 . G T 25 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=3,0,4,0;MQ=49;PV4=1,0.00071,0.32,0.41 PL:DP:SP:GT:GQ 55,0,106:7:0:0/1:58 | |
| 8416 chr10 102783498 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8417 chr10 102783897 . T G 14.2 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=0,6,0,4;MQ=49;PV4=1,0.25,0.0026,1 PL:DP:SP:GT:GQ 44,0,77:10:0:0/1:47 | |
| 8418 chr10 102796952 . C A 6.2 . DP=22;AF1=0.4999;CI95=0.5,0.5;DP4=6,5,0,4;MQ=49;PV4=0.1,0.018,0.0055,1 PL:DP:SP:GT:GQ 35,0,255:15:10:0/1:38 | |
| 8419 chr10 102820245 . GT GTTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8420 chr10 102822798 . A ACCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8421 chr10 102824491 . A G 10.4 . DP=11;AF1=0.5;CI95=0.5,0.5;DP4=2,5,0,3;MQ=48;PV4=1,0.089,0.0027,1 PL:DP:SP:GT:GQ 40,0,188:10:0:0/1:43 | |
| 8422 chr10 102824697 . GG GGAGTTTG 12.7 . INDEL;DP=8;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8423 chr10 102825172 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8424 chr10 102835816 . TC TCCTAGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8425 chr10 102836983 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8426 chr10 102844186 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 8427 chr10 102862220 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8428 chr10 102866402 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8429 chr10 102878985 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8430 chr10 102887091 . AA AATGCAGCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8431 chr10 102897776 . T C 6.2 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,44:2:0:0/1:37 | |
| 8432 chr10 102899440 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8433 chr10 102941634 . A C 5.46 . DP=5;AF1=0.4999;CI95=0.5,0.5;DP4=1,1,0,2;MQ=49;PV4=1,0.42,0.21,1 PL:DP:SP:GT:GQ 34,0,41:4:0:0/1:36 | |
| 8434 chr10 102963289 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8435 chr10 102963751 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 8436 chr10 102972383 . A ACCATCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8437 chr10 102975560 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8438 chr10 103020398 . T TCGGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8439 chr10 103023013 . T C 26.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=45 PL:DP:SP:GT:GQ 58,6,0:2:0:1/1:49 | |
| 8440 chr10 103023273 . C CG 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8441 chr10 103023647 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8442 chr10 103046284 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 8443 chr10 103051480 . C A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 8444 chr10 103055574 . A C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8445 chr10 103059177 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8446 chr10 103069399 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8447 chr10 103074337 . G C 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 8448 chr10 103079442 . A C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 8449 chr10 103082486 . C G 6.98 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,44:2:0:0/1:38 | |
| 8450 chr10 103084475 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8451 chr10 103090627 . G GTCT 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 8452 chr10 103154913 . CA CAAA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,40:2:0:0/1:42 | |
| 8453 chr10 103211004 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 8454 chr10 103221870 . CAGGAGGA CAGGA 99 . INDEL;DP=14;AF1=1;CI95=1,1;DP4=0,0,0,10;MQ=50 PL:DP:SP:GT:GQ 242,30,0:10:0:1/1:99 | |
| 8455 chr10 103221876 . GAAA G 12.7 . INDEL;DP=11;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8456 chr10 103228743 . G C 3.04 . DP=2;AF1=0.5061;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,16:2:0:0/1:19 | |
| 8457 chr10 103264367 . c cGTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8458 chr10 103267294 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8459 chr10 103267576 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8460 chr10 103280568 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8461 chr10 103294568 . T G 31 . DP=39;AF1=0.5;CI95=0.5,0.5;DP4=2,16,1,6;MQ=49;PV4=1,9.7e-05,3.2e-05,0.12 PL:DP:SP:GT:GQ 61,0,255:25:0:0/1:64 | |
| 8462 chr10 103294581 . G T 3.01 . DP=38;AF1=0.4997;CI95=0.5,0.5;DP4=6,4,0,4;MQ=47;PV4=0.085,0.0056,1,1 PL:DP:SP:GT:GQ 30,0,255:14:11:0/1:33 | |
| 8463 chr10 103295136 . T TAGAG 5.08 . INDEL;DP=10;AF1=0.5;CI95=0.5,0.5;DP4=2,0,0,1;MQ=50;PV4=0.33,1,1,1 PL:DP:SP:GT:GQ 41,0,76:3:0:0/1:44 | |
| 8464 chr10 103297789 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8465 chr10 103311541 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 8466 chr10 103320574 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8467 chr10 103340168 . C G 3.01 . DP=9;AF1=0.4999;CI95=0.5,0.5;DP4=1,1,0,2;MQ=49;PV4=1,1,0.048,0.41 PL:DP:SP:GT:GQ 30,0,32:4:0:0/1:31 | |
| 8468 chr10 103346236 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8469 chr10 103347262 . G GCTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8470 chr10 103349947 . G GATC 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=1,1,0,1;MQ=50;PV4=1,1,1,0.33 PL:DP:SP:GT:GQ 41,0,91:3:0:0/1:44 | |
| 8471 chr10 103374780 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8472 chr10 103375476 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8473 chr10 103384719 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8474 chr10 103403622 . A AGAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8475 chr10 103408454 . GCT G 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 8476 chr10 103415764 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8477 chr10 103431331 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8478 chr10 103432592 . A C 17.1 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=3,0,4,0;MQ=48;PV4=1,0.18,0.1,1 PL:DP:SP:GT:GQ 47,0,62:7:0:0/1:50 | |
| 8479 chr10 103441670 . ct cTTTGTt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8480 chr10 103463229 . a aCTGATAGAGTG 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=48 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 8481 chr10 103504112 . tt tTAAt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8482 chr10 103506530 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 8483 chr10 103524659 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8484 chr10 103526846 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8485 chr10 103527896 . A AACC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8486 chr10 103530257 . G A 13.2 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=50 PL:DP:SP:GT:GQ 45,9,0:3:0:1/1:63 | |
| 8487 chr10 103541948 . C T 20 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=49 PL:DP:SP:GT:GQ 52,9,0:3:0:1/1:63 | |
| 8488 chr10 103549724 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8489 chr10 103550583 . tt tTTGGCt 12.7 . INDEL;DP=5;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8490 chr10 103559650 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8491 chr10 103579103 . ttc t 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 8492 chr10 103589759 . A ACCATGCT 5.08 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,1,1,0.33 PL:DP:SP:GT:GQ 41,0,83:3:0:0/1:44 | |
| 8493 chr10 103595727 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8494 chr10 103611799 . GAAA GAA 17.3 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=50 PL:DP:SP:GT:GQ 56,6,0:2:0:1/1:49 | |
| 8495 chr10 103657382 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8496 chr10 103686980 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 8497 chr10 103699072 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 8498 chr10 103701717 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8499 chr10 103701891 . A ACG 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 8500 chr10 103709182 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8501 chr10 103715257 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8502 chr10 103716577 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8503 chr10 103725480 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 8504 chr10 103729590 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 8505 chr10 103750279 . A AGTAAT 3.25 . INDEL;DP=6;AF1=0.5;CI95=0.5,0.5;DP4=3,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,72:4:0:0/1:41 | |
| 8506 chr10 103769165 . T C 3.54 . DP=6;AF1=0.4998;CI95=0.5,0.5;DP4=1,2,0,1;MQ=48;PV4=1,1,0,1 PL:DP:SP:GT:GQ 31,0,86:4:0:0/1:34 | |
| 8507 chr10 103770029 . TCA TCAGGCTCCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8508 chr10 103789525 . TC TCCTGC 3.25 . INDEL;DP=12;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,1;MQ=50;PV4=1,1,1,0.49 PL:DP:SP:GT:GQ 38,0,63:4:0:0/1:41 | |
| 8509 chr10 103838787 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8510 chr10 103859631 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 8511 chr10 103861742 . T G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8512 chr10 103865143 . T A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 8513 chr10 103865380 . T TGACCAGA 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=49 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 8514 chr10 103874639 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8515 chr10 103895115 . ctatatatatatatat ctatatatatatat 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 8516 chr10 103900729 . G A 99 . DP=73;AF1=0.5;CI95=0.5,0.5;DP4=13,21,17,17;MQ=50;PV4=0.46,1.9e-34,0.023,1 PL:DP:SP:GT:GQ 144,0,255:68:3:0/1:99 | |
| 8517 chr10 103902897 . T G 14.2 . DP=9;AF1=0.505;CI95=0.5,0.5;DP4=0,2,0,5;MQ=48;PV4=1,1,1,0.02 PL:DP:SP:GT:GQ 44,0,17:7:0:0/1:20 | |
| 8518 chr10 103902988 . A T 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,39:2:0:0/1:34 | |
| 8519 chr10 103909150 . CC CCAC 7.35 . INDEL;DP=4;AF1=0.5001;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,36:2:0:0/1:38 | |
| 8520 chr10 103912587 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 8521 chr10 103913320 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 8522 chr10 103926776 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8523 chr10 103945051 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8524 chr10 103964564 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8525 chr10 103973969 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8526 chr10 104000185 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8527 chr10 104038724 . atcat aTCATCTTATCtcat 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8528 chr10 104042581 . GT GTCT 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 8529 chr10 104047543 . a aAGGGCT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 8530 chr10 104065985 . t tATAGCCTAG 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=48 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 8531 chr10 104066821 . GG GGATTACCTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8532 chr10 104071199 . AGAATTGAG A 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 8533 chr10 104071443 . TA TAAGTCTCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8534 chr10 104093470 . c cGCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8535 chr10 104123811 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 8536 chr10 104129984 . ACT ACTCTTCT 7.52 . INDEL;DP=7;AF1=0.5263;CI95=0.5,1;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,10:2:0:0/1:13 | |
| 8537 chr10 104136469 . T C 76 . DP=44;AF1=1;CI95=1,1;DP4=0,0,0,9;MQ=48 PL:DP:SP:GT:GQ 109,27,0:9:0:1/1:99 | |
| 8538 chr10 104139975 . C T 13.2 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=10,0,4,0;MQ=49;PV4=1,0.12,0.00021,1 PL:DP:SP:GT:GQ 43,0,142:14:0:0/1:46 | |
| 8539 chr10 104141007 . C T 3.01 . DP=20;AF1=0.4997;CI95=0.5,0.5;DP4=8,0,0,4;MQ=50;PV4=0.002,0.00014,0.021,0.19 PL:DP:SP:GT:GQ 30,0,192:12:27:0/1:33 | |
| 8540 chr10 104141159 . ATG ATGTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8541 chr10 104152484 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8542 chr10 104161617 . GGTAG GGTAGTAG 12.7 . INDEL;DP=9;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8543 chr10 104163569 . G A 28 . DP=13;AF1=0.5;CI95=0.5,0.5;DP4=2,4,2,3;MQ=49;PV4=1,0.0016,0.11,1 PL:DP:SP:GT:GQ 58,0,192:11:0:0/1:61 | |
| 8544 chr10 104176106 . A C 6.02 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 36,6,0:2:0:1/1:49 | |
| 8545 chr10 104181189 . G A 5.48 . DP=2;AF1=0.5024;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,20:2:0:0/1:23 | |
| 8546 chr10 104182355 . t tACTCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8547 chr10 104184953 . C G 25 . DP=40;AF1=0.5;CI95=0.5,0.5;DP4=3,16,1,16;MQ=50;PV4=0.61,2.5e-13,0.12,1 PL:DP:SP:GT:GQ 55,0,255:36:2:0/1:58 | |
| 8548 chr10 104202999 . tt tTCGACTTAt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8549 chr10 104207592 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8550 chr10 104217628 . CC CCACAC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 8551 chr10 104217895 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8552 chr10 104222685 . TCCC T 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 8553 chr10 104231234 . T C 16.9 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=46 PL:DP:SP:GT:GQ 48,6,0:2:0:1/1:49 | |
| 8554 chr10 104231651 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 8555 chr10 104233278 . G A 5.46 . DP=19;AF1=0.4999;CI95=0.5,0.5;DP4=3,0,3,0;MQ=48;PV4=1,0.035,0.44,0.48 PL:DP:SP:GT:GQ 34,0,45:6:0:0/1:37 | |
| 8556 chr10 104237637 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8557 chr10 104239652 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8558 chr10 104240932 . GC GCCTC 7.36 . INDEL;DP=17;AF1=0.5012;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,23:2:0:0/1:26 | |
| 8559 chr10 104240986 . C CACT 3.25 . INDEL;DP=15;AF1=0.5;CI95=0.5,0.5;DP4=2,1,0,1;MQ=50;PV4=1,1,1,0.22 PL:DP:SP:GT:GQ 38,0,73:4:0:0/1:41 | |
| 8560 chr10 104244139 . G T 63 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=1,18,0,5;MQ=48;PV4=1,0.0037,1e-16,1 PL:DP:SP:GT:GQ 93,0,255:24:0:0/1:96 | |
| 8561 chr10 104248106 . T A 64 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=0,10,0,13;MQ=49;PV4=1,8.5e-08,0.12,1 PL:DP:SP:GT:GQ 94,0,199:23:0:0/1:97 | |
| 8562 chr10 104264107 . C T 44 . DP=23;AF1=0.5;CI95=0.5,0.5;DP4=2,8,0,13;MQ=50;PV4=0.18,8.9e-08,0.24,1 PL:DP:SP:GT:GQ 74,0,255:23:7:0/1:77 | |
| 8563 chr10 104268877 . G C 57 . DP=41;AF1=0.5;CI95=0.5,0.5;DP4=27,1,7,5;MQ=50;PV4=0.006,1.1e-14,0.0016,1 PL:DP:SP:GT:GQ 87,0,255:40:22:0/1:90 | |
| 8564 chr10 104269217 . G A 60 . DP=8;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,3;MQ=47;PV4=1,0.12,1.2e-06,1 PL:DP:SP:GT:GQ 90,0,128:7:0:0/1:93 | |
| 8565 chr10 104277126 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8566 chr10 104282708 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8567 chr10 104283846 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8568 chr10 104291590 . T A 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 8569 chr10 104324023 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8570 chr10 104344103 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 8571 chr10 104347248 . a aGACTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8572 chr10 104349731 . a aAT 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 8573 chr10 104361205 . G GCACTCA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 8574 chr10 104375258 . G A 4.13 . DP=3;AF1=0.5002;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,28:2:0:0/1:30 | |
| 8575 chr10 104376986 . TG TGGG 7.35 . INDEL;DP=10;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,41:2:0:0/1:42 | |
| 8576 chr10 104377364 . C CTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8577 chr10 104379045 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8578 chr10 104379911 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8579 chr10 104404540 . A G 3.54 . DP=7;AF1=0.4998;CI95=0.5,0.5;DP4=3,1,2,0;MQ=49;PV4=1,0.22,0.0095,1 PL:DP:SP:GT:GQ 31,0,114:6:0:0/1:34 | |
| 8580 chr10 104405965 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8581 chr10 104427616 . T G 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8582 chr10 104428484 . T A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 8583 chr10 104459079 . TAA T 99 . INDEL;DP=8;AF1=1;CI95=1,1;DP4=0,0,8,0;MQ=50 PL:DP:SP:GT:GQ 184,24,0:8:0:1/1:96 | |
| 8584 chr10 104474046 . Ccctcctcctcctcctcctcct Ccctcctcctcctcctcct 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8585 chr10 104503130 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8586 chr10 104517409 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 8587 chr10 104529578 . T TTA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 8588 chr10 104530372 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8589 chr10 104562097 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 8590 chr10 104572276 . A G 99 . DP=31;AF1=1;CI95=1,1;DP4=0,0,25,1;MQ=48 PL:DP:SP:GT:GQ 159,78,0:26:0:1/1:99 | |
| 8591 chr10 104591231 . G C 13.2 . DP=15;AF1=0.5001;CI95=0.5,0.5;DP4=2,0,2,0;MQ=46;PV4=1,1,0.0022,1 PL:DP:SP:GT:GQ 43,0,33:4:0:0/1:36 | |
| 8592 chr10 104596338 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8593 chr10 104597844 . T C 16.9 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47 PL:DP:SP:GT:GQ 48,6,0:2:0:1/1:49 | |
| 8594 chr10 104608787 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8595 chr10 104609911 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8596 chr10 104614367 . G C 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 8597 chr10 104619836 . G GTTT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 8598 chr10 104633459 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8599 chr10 104647763 . A AGG 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=1,1,1,0;MQ=50;PV4=1,1,1,0.33 PL:DP:SP:GT:GQ 41,0,72:3:0:0/1:44 | |
| 8600 chr10 104653144 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8601 chr10 104653802 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 8602 chr10 104675095 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 8603 chr10 104696766 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 8604 chr10 104702115 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8605 chr10 104710610 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8606 chr10 104733642 . CC CCCTC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 8607 chr10 104756788 . c cGT 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8608 chr10 104766414 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8609 chr10 104801218 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8610 chr10 104804252 . G A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 8611 chr10 104819358 . C CCCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8612 chr10 104820191 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 8613 chr10 104828679 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8614 chr10 104836174 . T A 5.46 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 8615 chr10 104839273 . CC CCAAGAGCGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8616 chr10 104850594 . T G 21 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=3,5,0,4;MQ=49;PV4=0.49,0.27,0.00033,1 PL:DP:SP:GT:GQ 51,0,153:12:3:0/1:54 | |
| 8617 chr10 104857919 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 8618 chr10 104940526 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8619 chr10 104957191 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8620 chr10 104971190 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8621 chr10 104988902 . G A 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8622 chr10 104995342 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 8623 chr10 104998722 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 8624 chr10 105003307 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8625 chr10 105006261 . T G,C 8.44 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=49 PL:DP:SP:GT:GQ 50,17,38,11,0,38:3:0:1/1:49 | |
| 8626 chr10 105016606 . G A 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8627 chr10 105020452 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8628 chr10 105024357 . acaac a 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8629 chr10 105078866 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8630 chr10 105091643 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8631 chr10 105104977 . T A 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8632 chr10 105128313 . G A 6.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 8633 chr10 105136295 . A C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 8634 chr10 105141786 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 8635 chr10 105146027 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8636 chr10 105158271 . G C 4.77 . DP=28;AF1=0.4999;CI95=0.5,0.5;DP4=0,13,0,3;MQ=49;PV4=1,0.28,6.6e-05,0.015 PL:DP:SP:GT:GQ 33,0,178:16:0:0/1:36 | |
| 8637 chr10 105158281 . T G 60 . DP=34;AF1=0.5;CI95=0.5,0.5;DP4=0,6,0,9;MQ=48;PV4=1,0.29,9.5e-05,1 PL:DP:SP:GT:GQ 90,0,89:15:0:0/1:89 | |
| 8638 chr10 105163570 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 8639 chr10 105176179 . T C 68.1 . DP=30;AF1=1;CI95=1,1;DP4=0,0,7,0;MQ=48 PL:DP:SP:GT:GQ 101,21,0:7:0:1/1:84 | |
| 8640 chr10 105208189 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8641 chr10 105219534 . T A 6.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 8642 chr10 105242267 . GC GCAAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8643 chr10 105249814 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 8644 chr10 105261105 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8645 chr10 105263346 . A T 9.53 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 8646 chr10 105268601 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8647 chr10 105270124 . C CGA 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,1,1,0.33 PL:DP:SP:GT:GQ 41,0,79:3:0:0/1:44 | |
| 8648 chr10 105307584 . T G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 8649 chr10 105330185 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8650 chr10 105330947 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8651 chr10 105362209 . T C 72.4 . DP=78;AF1=0.5554;CI95=0.5,1;DP4=1,2,5,6;MQ=49;PV4=1,1,0.15,1 PL:DP:SP:GT:GQ 102,0,7:14:0:0/1:10 | |
| 8652 chr10 105363289 . T C 53 . DP=20;AF1=0.5;CI95=0.5,0.5;DP4=8,5,2,2;MQ=49;PV4=1,0.14,4.8e-14,0.45 PL:DP:SP:GT:GQ 83,0,255:17:0:0/1:86 | |
| 8653 chr10 105373505 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8654 chr10 105375746 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8655 chr10 105376872 . CA C,CGTCAGTGA 6.36 . INDEL;DP=9;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=50 PL:DP:SP:GT:GQ 85,47,43,41,0,40:3:0:1/1:49 | |
| 8656 chr10 105378126 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 8657 chr10 105389134 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8658 chr10 105392010 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8659 chr10 105406563 . T TCGGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8660 chr10 105423212 . GC GCCGCC 7.35 . INDEL;DP=2;AF1=0.5006;CI95=0.5,0.5;DP4=0,1,1,0;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,26:2:0:0/1:29 | |
| 8661 chr10 105427565 . A ATCACACGCCAAATTT 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 8662 chr10 105436314 . A T 12.3 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 8663 chr10 105440744 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8664 chr10 105447360 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 8665 chr10 105449447 . T C 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8666 chr10 105452250 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 8667 chr10 105454304 . gaaa gaa 14.4 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=50 PL:DP:SP:GT:GQ 53,6,0:2:0:1/1:49 | |
| 8668 chr10 105460070 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8669 chr10 105467581 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8670 chr10 105474619 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8671 chr10 105515871 . CA CAAA 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8672 chr10 105517875 . cc cCTCTc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8673 chr10 105522310 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 8674 chr10 105528374 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8675 chr10 105531065 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8676 chr10 105545890 . C CGTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8677 chr10 105550227 . T A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 8678 chr10 105557347 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 8679 chr10 105580740 . T G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 8680 chr10 105602537 . ac aCCCAGc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8681 chr10 105607761 . TA TAA 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 8682 chr10 105607980 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8683 chr10 105610806 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 8684 chr10 105615986 . C T 6.98 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,44:2:0:0/1:38 | |
| 8685 chr10 105616956 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8686 chr10 105631396 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8687 chr10 105651971 . T G 62 . DP=21;AF1=0.5;CI95=0.5,0.5;DP4=7,5,4,3;MQ=49;PV4=1,8.1e-07,5.9e-13,1 PL:DP:SP:GT:GQ 92,0,255:19:0:0/1:95 | |
| 8688 chr10 105659826 . T C 7.8 . DP=33;AF1=0.5;CI95=0.5,0.5;DP4=18,3,7,0;MQ=50;PV4=0.55,1.2e-06,0.0005,1 PL:DP:SP:GT:GQ 37,0,255:28:3:0/1:40 | |
| 8689 chr10 105684157 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 8690 chr10 105703681 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8691 chr10 105705364 . CC CCGTGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8692 chr10 105706495 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8693 chr10 105747696 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8694 chr10 105750832 . TGGATC T 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8695 chr10 105759749 . ATCT ATCTCTCT 99 . INDEL;DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=50 PL:DP:SP:GT:GQ 176,15,0:5:0:1/1:75 | |
| 8696 chr10 105759751 . CT CTNNNT 99 . INDEL;DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=50 PL:DP:SP:GT:GQ 176,15,0:5:0:1/1:75 | |
| 8697 chr10 105762429 . C G 9.52 . DP=11;AF1=0.5;CI95=0.5,0.5;DP4=5,2,0,2;MQ=49;PV4=0.17,0.09,5.5e-09,1 PL:DP:SP:GT:GQ 39,0,219:9:8:0/1:42 | |
| 8698 chr10 105762591 . G A 42 . DP=32;AF1=0.5;CI95=0.5,0.5;DP4=2,17,2,10;MQ=50;PV4=0.63,2.6e-13,0.29,1 PL:DP:SP:GT:GQ 72,0,255:31:2:0/1:75 | |
| 8699 chr10 105763296 . A G 72 . DP=30;AF1=0.5;CI95=0.5,0.5;DP4=0,16,1,11;MQ=49;PV4=0.43,3.5e-11,0.00075,1 PL:DP:SP:GT:GQ 102,0,236:28:0:0/1:99 | |
| 8700 chr10 105767921 . A G 7.59 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 38,6,0:2:0:1/1:49 | |
| 8701 chr10 105781380 . T C 7.84 . DP=3;AF1=0.5063;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,16:2:0:0/1:19 | |
| 8702 chr10 105783139 . C G 4.13 . DP=2;AF1=0.5006;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,25:2:0:0/1:27 | |
| 8703 chr10 105786012 . A ATTTTAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8704 chr10 105793173 . T G 18.1 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=4,7,2,4;MQ=50;PV4=1,2.9e-06,1,1 PL:DP:SP:GT:GQ 48,0,255:17:0:0/1:51 | |
| 8705 chr10 105794067 . AACA AACACA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,39:2:0:0/1:41 | |
| 8706 chr10 105796449 . A G 29.5 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=49 PL:DP:SP:GT:GQ 62,12,0:4:0:1/1:72 | |
| 8707 chr10 105796819 . A G 37.5 . DP=24;AF1=1;CI95=0.5,1;DP4=0,0,2,2;MQ=49 PL:DP:SP:GT:GQ 70,12,0:4:0:1/1:72 | |
| 8708 chr10 105799825 . G A 10.4 . DP=19;AF1=0.5001;CI95=0.5,0.5;DP4=0,3,0,3;MQ=49;PV4=1,1,0.25,1 PL:DP:SP:GT:GQ 40,0,34:6:0:0/1:36 | |
| 8709 chr10 105802636 . T G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8710 chr10 105803197 . G A 8.44 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 39,6,0:2:0:1/1:49 | |
| 8711 chr10 105803443 . A G 5.46 . DP=3;AF1=0.4999;CI95=0.5,0.5;DP4=1,1,0,1;MQ=47;PV4=1,0.41,0.14,1 PL:DP:SP:GT:GQ 34,0,85:3:0:0/1:37 | |
| 8712 chr10 105809224 . G A 3.54 . DP=30;AF1=0.4998;CI95=0.5,0.5;DP4=9,7,0,4;MQ=49;PV4=0.094,0.0038,3e-07,0.44 PL:DP:SP:GT:GQ 31,0,255:20:10:0/1:34 | |
| 8713 chr10 105820099 . a aGAT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 8714 chr10 105822160 . A T 3.54 . DP=11;AF1=0.4998;CI95=0.5,0.5;DP4=0,3,1,2;MQ=48;PV4=1,0.45,0.025,1 PL:DP:SP:GT:GQ 31,0,48:6:0:0/1:34 | |
| 8715 chr10 105830138 . a aCT 7.35 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 8716 chr10 105833027 . T A 5.46 . DP=14;AF1=0.4999;CI95=0.5,0.5;DP4=4,1,0,3;MQ=49;PV4=0.14,0.076,1,0.41 PL:DP:SP:GT:GQ 34,0,131:8:8:0/1:37 | |
| 8717 chr10 105835308 . taac tCTGaac,t 9.94 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,2,0;MQ=50 PL:DP:SP:GT:GQ 88,44,47,41,0,44:2:0:1/1:41 | |
| 8718 chr10 105856145 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8719 chr10 105872021 . tt tTTTCTAGTGt 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8720 chr10 105883957 . ATTTTTTTTTTT ATT 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 8721 chr10 105905287 . T G 3.54 . DP=9;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,2,0;MQ=48;PV4=0.33,0.022,0.077,1 PL:DP:SP:GT:GQ 31,0,41:3:0:0/1:34 | |
| 8722 chr10 105905302 . T TGGGTGA 3.25 . INDEL;DP=9;AF1=0.5;CI95=0.5,0.5;DP4=1,2,0,1;MQ=50;PV4=1,1,1,0.4 PL:DP:SP:GT:GQ 38,0,62:4:0:0/1:41 | |
| 8723 chr10 105905360 . T TAAG 5.08 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,1,1,0.042 PL:DP:SP:GT:GQ 41,0,83:3:0:0/1:44 | |
| 8724 chr10 105910221 . A G 19.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 51,6,0:2:0:1/1:49 | |
| 8725 chr10 105915712 . G T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 8726 chr10 105922052 . CT C 69.5 . INDEL;DP=34;AF1=0.5;CI95=0.5,0.5;DP4=4,0,10,0;MQ=50;PV4=1,0.00051,1,1 PL:DP:SP:GT:GQ 107,0,80:14:0:0/1:83 | |
| 8727 chr10 105922056 . GTT GT 93.5 . INDEL;DP=35;AF1=0.5;CI95=0.5,0.5;DP4=2,2,15,0;MQ=50;PV4=0.035,0.0021,1,1 PL:DP:SP:GT:GQ 131,0,80:19:15:0/1:83 | |
| 8728 chr10 105941247 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8729 chr10 105946495 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8730 chr10 105957561 . G A 9.31 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 8731 chr10 105978581 . C G 70 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=1,1,1,5;MQ=47;PV4=0.46,0.0056,0.093,1 PL:DP:SP:GT:GQ 100,0,70:8:3:0/1:73 | |
| 8732 chr10 105990559 . G A 99 . DP=39;AF1=0.5;CI95=0.5,0.5;DP4=3,18,3,9;MQ=48;PV4=0.64,0.013,2.3e-15,1 PL:DP:SP:GT:GQ 231,0,255:33:2:0/1:99 | |
| 8733 chr10 106013469 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8734 chr10 106016846 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8735 chr10 106019569 . G T 64 . DP=30;AF1=0.5;CI95=0.5,0.5;DP4=0,14,0,12;MQ=49;PV4=1,2.7e-10,0.0014,0.45 PL:DP:SP:GT:GQ 94,0,230:26:0:0/1:97 | |
| 8736 chr10 106039185 . A G 56 . DP=36;AF1=0.6671;CI95=0.5,1;DP4=1,0,6,1;MQ=49;PV4=1,0.14,0.22,1 PL:DP:SP:GT:GQ 85,0,3:8:0:0/1:5 | |
| 8737 chr10 106039303 . A G 26 . DP=9;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=48 PL:DP:SP:GT:GQ 58,9,0:3:0:1/1:63 | |
| 8738 chr10 106058901 . G T 65 . DP=37;AF1=0.5;CI95=0.5,0.5;DP4=12,14,3,7;MQ=49;PV4=0.47,1.2e-06,2.8e-05,1 PL:DP:SP:GT:GQ 95,0,255:36:3:0/1:98 | |
| 8739 chr10 106065389 . AATA AATATA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8740 chr10 106086162 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8741 chr10 106087575 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8742 chr10 106109309 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8743 chr10 106121730 . C T 20 . DP=21;AF1=0.5;CI95=0.5,0.5;DP4=13,0,6,0;MQ=49;PV4=1,1.6e-08,0.0007,1 PL:DP:SP:GT:GQ 50,0,230:19:0:0/1:53 | |
| 8744 chr10 106127305 . AAGAGAG AAGAGAGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8745 chr10 106133901 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8746 chr10 106159305 . G A 23.5 . DP=23;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=49 PL:DP:SP:GT:GQ 56,12,0:4:0:1/1:72 | |
| 8747 chr10 106165754 . T A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 8748 chr10 106166570 . G A 36 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=0,8,0,9;MQ=49;PV4=1,4e-08,0.17,1 PL:DP:SP:GT:GQ 66,0,186:17:0:0/1:69 | |
| 8749 chr10 106171055 . tt tTCt 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 8750 chr10 106184134 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 8751 chr10 106202699 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 8752 chr10 106206694 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 8753 chr10 106252895 . TC TCCAC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 8754 chr10 106267718 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8755 chr10 106283250 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 8756 chr10 106297380 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8757 chr10 106299187 . A T 6.98 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,38:2:0:0/1:37 | |
| 8758 chr10 106306253 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8759 chr10 106307506 . C T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 8760 chr10 106335455 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8761 chr10 106343823 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8762 chr10 106363751 . A C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 8763 chr10 106364037 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8764 chr10 106364234 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8765 chr10 106409156 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8766 chr10 106419151 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8767 chr10 106438440 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 8768 chr10 106446323 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 8769 chr10 106468622 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8770 chr10 106515740 . C A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 8771 chr10 106517213 . A T 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 8772 chr10 106518254 . ct cTTGTGt 7.37 . INDEL;DP=2;AF1=0.5025;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,20:2:0:0/1:23 | |
| 8773 chr10 106532025 . TCTGC TCTGCTGC 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 8774 chr10 106546658 . C T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 8775 chr10 106551913 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 8776 chr10 106577681 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8777 chr10 106583500 . tc tCATAc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8778 chr10 106604504 . A C 4.77 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8779 chr10 106620751 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8780 chr10 106623117 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8781 chr10 106623942 . T TAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8782 chr10 106628213 . C G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 8783 chr10 106631295 . A C 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 8784 chr10 106639895 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8785 chr10 106647106 . gc gCc 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8786 chr10 106676503 . A AAACTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8787 chr10 106677942 . CA CATAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8788 chr10 106678521 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8789 chr10 106692657 . A C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 8790 chr10 106696438 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8791 chr10 106701325 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8792 chr10 106715710 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 8793 chr10 106723220 . ac aCGc 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 8794 chr10 106745122 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8795 chr10 106747347 . C G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 8796 chr10 106777213 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 8797 chr10 106783770 . C CTCCCTAAG 6.56 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 8798 chr10 106785496 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8799 chr10 106812336 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8800 chr10 106816840 . ACC ACCCCTCCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8801 chr10 106818114 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8802 chr10 106835605 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8803 chr10 106858191 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 8804 chr10 106895614 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 8805 chr10 106907586 . C G 99 . DP=20;AF1=1;CI95=1,1;DP4=0,0,1,15;MQ=49 PL:DP:SP:GT:GQ 134,48,0:16:0:1/1:99 | |
| 8806 chr10 106912149 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8807 chr10 106918811 . A G 11.3 . DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,2,1,1;MQ=49;PV4=1,0.22,0.21,0.44 PL:DP:SP:GT:GQ 41,0,62:4:0:0/1:44 | |
| 8808 chr10 106925478 . A AGCGGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8809 chr10 106936657 . C CGCAGATT 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8810 chr10 106951023 . A AC 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 8811 chr10 106952995 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8812 chr10 106955808 . C CT 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 8813 chr10 106970848 . AG A 23.5 . INDEL;DP=14;AF1=0.5;CI95=0.5,0.5;DP4=10,0,4,0;MQ=50;PV4=1,6.3e-08,1,1 PL:DP:SP:GT:GQ 61,0,166:14:0:0/1:64 | |
| 8814 chr10 106970966 . C G 3.01 . DP=13;AF1=0.4997;CI95=0.5,0.5;DP4=4,2,0,2;MQ=48;PV4=0.43,1,0.17,1 PL:DP:SP:GT:GQ 30,0,95:8:4:0/1:33 | |
| 8815 chr10 106974123 . AACACACACACACACACA AACACACACACACACACACA 7.35 . INDEL;DP=6;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 8816 chr10 106974128 . ACACACACACACA ACACACACACACACA 7.35 . INDEL;DP=6;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 8817 chr10 106975846 . GTT GTTT 27.2 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=50 PL:DP:SP:GT:GQ 66,6,0:2:0:1/1:49 | |
| 8818 chr10 107006383 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8819 chr10 107012952 . G GTCGC 7.35 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 8820 chr10 107017916 . A ACCACGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8821 chr10 107018253 . TG TGGG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 8822 chr10 107040215 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8823 chr10 107040878 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8824 chr10 107053687 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8825 chr10 107095069 . C CCA 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 8826 chr10 107096932 . gt gTTCt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8827 chr10 107103001 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 8828 chr10 107157435 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 8829 chr10 107212146 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8830 chr10 107258168 . AT ATTCTTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8831 chr10 107266124 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8832 chr10 107277080 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8833 chr10 107277728 . T G 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=48;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 8834 chr10 107279833 . C CCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8835 chr10 107284240 . a aAGTAGGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8836 chr10 107301678 . T TTCTACG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8837 chr10 107316552 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 8838 chr10 107342901 . t tCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8839 chr10 107342976 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8840 chr10 107350697 . G GAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8841 chr10 107363050 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8842 chr10 107386515 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8843 chr10 107395674 . G T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 8844 chr10 107397141 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8845 chr10 107401861 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8846 chr10 107405927 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 8847 chr10 107409546 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8848 chr10 107445372 . AT A 18.5 . INDEL;DP=18;AF1=0.5;CI95=0.5,0.5;DP4=8,4,4,0;MQ=46;PV4=0.52,0.025,1,1 PL:DP:SP:GT:GQ 56,0,220:16:3:0/1:59 | |
| 8849 chr10 107467683 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8850 chr10 107471750 . t tAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8851 chr10 107476475 . ctc cTCCAGATGtc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8852 chr10 107483718 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8853 chr10 107495100 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 8854 chr10 107508445 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8855 chr10 107513583 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8856 chr10 107519690 . T TCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8857 chr10 107524641 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8858 chr10 107534148 . T A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 8859 chr10 107557132 . CACCCATTA CA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8860 chr10 107568370 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 8861 chr10 107581146 . C G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 8862 chr10 107600458 . T A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 8863 chr10 107601479 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 8864 chr10 107618048 . G A 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 8865 chr10 107625605 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8866 chr10 107678281 . T TCTTGAATGGTTTGC 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 8867 chr10 107719342 . cctctctctctctc cctctctctctc 5.8 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 8868 chr10 107734489 . A C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 8869 chr10 107750734 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 8870 chr10 107753085 . T G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8871 chr10 107758039 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8872 chr10 107808497 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8873 chr10 107822673 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8874 chr10 107826869 . T C 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8875 chr10 107835096 . C A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 8876 chr10 107842764 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 8877 chr10 107889901 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8878 chr10 107919170 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 8879 chr10 107925288 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8880 chr10 107940372 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8881 chr10 107948094 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 8882 chr10 107953686 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8883 chr10 107955676 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8884 chr10 107973244 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8885 chr10 107976309 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8886 chr10 107990682 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8887 chr10 107994163 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 8888 chr10 107999156 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8889 chr10 108008279 . C G 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 8890 chr10 108029258 . ctg c 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 8891 chr10 108032669 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8892 chr10 108077881 . g gCACAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8893 chr10 108079326 . C G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 8894 chr10 108084236 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8895 chr10 108098881 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8896 chr10 108127422 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 8897 chr10 108142725 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8898 chr10 108172756 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8899 chr10 108193092 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8900 chr10 108199301 . G T 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8901 chr10 108211789 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8902 chr10 108233650 . ATC A 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8903 chr10 108235477 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8904 chr10 108240359 . GC GCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8905 chr10 108249766 . A ACAGAGGTCATGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8906 chr10 108262591 . TA TACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8907 chr10 108290786 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 8908 chr10 108314410 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8909 chr10 108347245 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8910 chr10 108366861 . T G 3.54 . DP=8;AF1=0.4998;CI95=0.5,0.5;DP4=2,0,2,0;MQ=49;PV4=1,0.016,0.019,1 PL:DP:SP:GT:GQ 31,0,80:4:0:0/1:34 | |
| 8911 chr10 108367020 . C T 29 . DP=20;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=47 PL:DP:SP:GT:GQ 61,9,0:3:0:1/1:63 | |
| 8912 chr10 108368870 . CCA C 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8913 chr10 108380213 . G A 99 . DP=47;AF1=0.5;CI95=0.5,0.5;DP4=11,8,14,8;MQ=48;PV4=0.76,0.0024,6.5e-05,1 PL:DP:SP:GT:GQ 222,0,255:41:1:0/1:99 | |
| 8914 chr10 108389249 . T C 84.5 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=43 PL:DP:SP:GT:GQ 117,12,0:4:0:1/1:72 | |
| 8915 chr10 108397195 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8916 chr10 108412353 . A G 3.54 . DP=7;AF1=0.4998;CI95=0.5,0.5;DP4=0,2,0,2;MQ=48;PV4=1,0.17,0.092,0.11 PL:DP:SP:GT:GQ 31,0,62:4:0:0/1:34 | |
| 8917 chr10 108418806 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8918 chr10 108431952 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 8919 chr10 108434187 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8920 chr10 108447935 . A T 18.1 . DP=41;AF1=0.5;CI95=0.5,0.5;DP4=4,10,8,0;MQ=49;PV4=0.0017,0.00012,0.0016,1 PL:DP:SP:GT:GQ 48,0,255:22:28:0/1:51 | |
| 8921 chr10 108451410 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 8922 chr10 108453845 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8923 chr10 108472807 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8924 chr10 108485639 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8925 chr10 108519512 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8926 chr10 108521566 . A G 36.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=43 PL:DP:SP:GT:GQ 68,6,0:2:0:1/1:49 | |
| 8927 chr10 108545777 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 8928 chr10 108562117 . tctc t 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 8929 chr10 108598453 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8930 chr10 108619613 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8931 chr10 108620577 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 8932 chr10 108623997 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8933 chr10 108632139 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8934 chr10 108639144 . ta tACCGa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8935 chr10 108644914 . G T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 8936 chr10 108668057 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 8937 chr10 108673455 . C G 4.13 . DP=2;AF1=0.5003;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,27:2:0:0/1:29 | |
| 8938 chr10 108675029 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 8939 chr10 108680492 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 8940 chr10 108684555 . T TCTC 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 8941 chr10 108692363 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8942 chr10 108704469 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8943 chr10 108709192 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 8944 chr10 108723864 . G GATA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 8945 chr10 108745608 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8946 chr10 108770298 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 8947 chr10 108778327 . atgt at 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 8948 chr10 108785484 . GACCCT G 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8949 chr10 108821173 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8950 chr10 108821175 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8951 chr10 108848083 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 8952 chr10 108901955 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 8953 chr10 108912267 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 8954 chr10 108923221 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8955 chr10 108949406 . G C 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 8956 chr10 108974587 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8957 chr10 108985741 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8958 chr10 109009323 . C G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 8959 chr10 109057614 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8960 chr10 109076791 . T TC 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8961 chr10 109120743 . gaat gAATTaat 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8962 chr10 109131469 . T TCAGTGTGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8963 chr10 109139738 . G C 8.65 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8964 chr10 109146441 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8965 chr10 109153784 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8966 chr10 109161666 . C T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 8967 chr10 109162242 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8968 chr10 109180872 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8969 chr10 109181785 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 8970 chr10 109182001 . A C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 8971 chr10 109184159 . T G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 8972 chr10 109228868 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 8973 chr10 109236479 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8974 chr10 109241452 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 8975 chr10 109242101 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 8976 chr10 109244957 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 8977 chr10 109305702 . G T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8978 chr10 109308944 . CTG C 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 8979 chr10 109318057 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 8980 chr10 109339209 . C G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 8981 chr10 109353789 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8982 chr10 109364005 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 8983 chr10 109383912 . t tNNNNNNNN 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8984 chr10 109393046 . G A 20.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 52,6,0:2:0:1/1:49 | |
| 8985 chr10 109393492 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 8986 chr10 109416589 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8987 chr10 109427723 . CTT C 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 8988 chr10 109448325 . G T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 8989 chr10 109453610 . ATC A 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 8990 chr10 109458269 . A AGAT 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8991 chr10 109483874 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 8992 chr10 109499538 . C T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 8993 chr10 109529996 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 8994 chr10 109530601 . T A 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 8995 chr10 109536197 . T G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 8996 chr10 109543059 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 8997 chr10 109544085 . G A 6.79 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 37,6,0:2:0:1/1:49 | |
| 8998 chr10 109545325 . tg tGGTCg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 8999 chr10 109549242 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9000 chr10 109555050 . gc gCACTc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9001 chr10 109561711 . C G 12.3 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 9002 chr10 109562812 . AGA AGAGACGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9003 chr10 109568653 . ACACCAC ACAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9004 chr10 109622190 . A G 12.3 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 9005 chr10 109627686 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 9006 chr10 109647777 . tt tTATGt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9007 chr10 109657441 . T TGGTAC 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=49 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 9008 chr10 109661834 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9009 chr10 109662114 . ttggg t 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9010 chr10 109676171 . G A 50.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=43 PL:DP:SP:GT:GQ 82,6,0:2:0:1/1:49 | |
| 9011 chr10 109679260 . aagag aag 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 9012 chr10 109707279 . C A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 9013 chr10 109721885 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9014 chr10 109745320 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9015 chr10 109747932 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9016 chr10 109784794 . a aCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9017 chr10 109787692 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9018 chr10 109817047 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9019 chr10 109832852 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9020 chr10 109845758 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9021 chr10 109906181 . caaata ca 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9022 chr10 109936488 . A T 6.2 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,40:2:0:0/1:37 | |
| 9023 chr10 109939365 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9024 chr10 109941860 . t tGGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9025 chr10 109949768 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9026 chr10 109958793 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9027 chr10 110037654 . AAG AAGAG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 9028 chr10 110045234 . ag aGTCGATCg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9029 chr10 110051577 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9030 chr10 110058614 . ca cACTATGTGGTa 7.35 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 9031 chr10 110063222 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 9032 chr10 110095364 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9033 chr10 110117207 . actgc ac 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 9034 chr10 110128791 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9035 chr10 110129448 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9036 chr10 110129454 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9037 chr10 110134270 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9038 chr10 110154150 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9039 chr10 110157738 . T TA 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 9040 chr10 110167038 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9041 chr10 110167051 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9042 chr10 110184066 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9043 chr10 110193674 . aa aAATCa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9044 chr10 110210422 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9045 chr10 110221987 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9046 chr10 110238183 . t tAGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9047 chr10 110248896 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9048 chr10 110311980 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9049 chr10 110328757 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 9050 chr10 110336954 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9051 chr10 110336963 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9052 chr10 110341748 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9053 chr10 110350755 . c cCAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9054 chr10 110354316 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9055 chr10 110360751 . ca cACGAGa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9056 chr10 110369397 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9057 chr10 110379935 . GAT GATCAGCCAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9058 chr10 110394671 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 9059 chr10 110394824 . gg gGGTg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9060 chr10 110411360 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9061 chr10 110418505 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9062 chr10 110423083 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9063 chr10 110428326 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 9064 chr10 110430080 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9065 chr10 110465336 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9066 chr10 110479604 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9067 chr10 110507572 . C T 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 9068 chr10 110527679 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9069 chr10 110581085 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9070 chr10 110584274 . T G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 9071 chr10 110602200 . T TNNN 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9072 chr10 110634384 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9073 chr10 110635902 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9074 chr10 110646206 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9075 chr10 110662146 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9076 chr10 110668608 . T G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 9077 chr10 110691433 . t tGTC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 9078 chr10 110702566 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9079 chr10 110726103 . T C 5.46 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,44:2:0:0/1:37 | |
| 9080 chr10 110728490 . GCA GCACA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,40:2:0:0/1:42 | |
| 9081 chr10 110730964 . G C 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 9082 chr10 110741885 . TT TTTCGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9083 chr10 110768367 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 9084 chr10 110779655 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9085 chr10 110787917 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9086 chr10 110815635 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9087 chr10 110818139 . A C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 9088 chr10 110821577 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9089 chr10 110822562 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9090 chr10 110834523 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 9091 chr10 110834601 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9092 chr10 110859163 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9093 chr10 110865790 . CCACA CCA 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 9094 chr10 110876921 . ac aCc 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 9095 chr10 110878221 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9096 chr10 110885916 . G A 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 9097 chr10 110906575 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9098 chr10 110917265 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9099 chr10 110921648 . CAT CATAT 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 9100 chr10 110925828 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 9101 chr10 110979915 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9102 chr10 110999319 . T A 7.8 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9103 chr10 111010019 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9104 chr10 111020137 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9105 chr10 111048870 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9106 chr10 111057911 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9107 chr10 111068948 . t tGGGCGGCA 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 9108 chr10 111079530 . agt aGTGgt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9109 chr10 111088356 . c cA 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 9110 chr10 111119496 . GGG GGGCGG 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 9111 chr10 111159397 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9112 chr10 111162299 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9113 chr10 111164311 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 9114 chr10 111170640 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 9115 chr10 111182675 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 9116 chr10 111197472 . C A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 9117 chr10 111208817 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9118 chr10 111214129 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 9119 chr10 111254855 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 9120 chr10 111257733 . C CCACT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9121 chr10 111258114 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9122 chr10 111264896 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9123 chr10 111285643 . AT ATCT 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 9124 chr10 111287394 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 9125 chr10 111292622 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 9126 chr10 111294821 . A ATTTG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 9127 chr10 111312616 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9128 chr10 111321824 . TAGAAGA TAGA 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 9129 chr10 111332816 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9130 chr10 111344680 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 9131 chr10 111363007 . C CAAGATTTGT 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,44:2:0:0/1:42 | |
| 9132 chr10 111364889 . agc aGCgc 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9133 chr10 111372427 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9134 chr10 111381028 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 9135 chr10 111387531 . atct aTCTGTGtct 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=49 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 9136 chr10 111398541 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9137 chr10 111411477 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9138 chr10 111421882 . catata cATatata 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9139 chr10 111432068 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9140 chr10 111433744 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9141 chr10 111465237 . ga gAAATa 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 9142 chr10 111466196 . A AGGATAAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9143 chr10 111509536 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9144 chr10 111533714 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9145 chr10 111543364 . C T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 9146 chr10 111546458 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 9147 chr10 111593408 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 9148 chr10 111600743 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9149 chr10 111604927 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9150 chr10 111606692 . TT TTGTGTGAAAGCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9151 chr10 111610388 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9152 chr10 111613198 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9153 chr10 111618391 . C T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 9154 chr10 111619290 . a aTAGATC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9155 chr10 111621821 . T G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9156 chr10 111622869 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9157 chr10 111625185 . G A 5.46 . DP=7;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,3;MQ=50;PV4=1,0.0019,1,0.067 PL:DP:SP:GT:GQ 34,0,38:4:0:0/1:36 | |
| 9158 chr10 111626734 . A AGCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9159 chr10 111631665 . C G 37 . DP=36;AF1=0.5;CI95=0.5,0.5;DP4=0,21,0,15;MQ=50;PV4=1,7.4e-12,0.029,1 PL:DP:SP:GT:GQ 67,0,242:36:0:0/1:70 | |
| 9160 chr10 111631859 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9161 chr10 111633019 . TA TAATGGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9162 chr10 111646817 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9163 chr10 111667724 . C CTCGCAACAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9164 chr10 111670955 . GT GTGACTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9165 chr10 111671402 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9166 chr10 111680838 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9167 chr10 111681263 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9168 chr10 111681276 . G C 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9169 chr10 111683688 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9170 chr10 111684212 . C A 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 9171 chr10 111693740 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 9172 chr10 111699387 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9173 chr10 111699598 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9174 chr10 111719798 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9175 chr10 111791060 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9176 chr10 111792557 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9177 chr10 111793956 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9178 chr10 111818223 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 9179 chr10 111846765 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9180 chr10 111855344 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9181 chr10 111876197 . T C 7.59 . DP=9;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 38,6,0:2:0:1/1:49 | |
| 9182 chr10 111881839 . G A 19.1 . DP=21;AF1=0.5;CI95=0.5,0.5;DP4=13,0,5,0;MQ=49;PV4=1,0.0029,6e-05,1 PL:DP:SP:GT:GQ 49,0,218:18:0:0/1:52 | |
| 9183 chr10 111889892 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9184 chr10 111897566 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9185 chr10 111916297 . T TAGA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9186 chr10 111927782 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 9187 chr10 111934154 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 9188 chr10 111945114 . t tCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9189 chr10 111952122 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9190 chr10 111967100 . T TGCGTCTATCCCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9191 chr10 111970800 . G GTCA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 9192 chr10 111973123 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 9193 chr10 111980104 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9194 chr10 111980400 . A ACCACGGTCCAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9195 chr10 111984981 . t tCGACC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9196 chr10 111988412 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 9197 chr10 111992749 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9198 chr10 111995985 . gg gGTAg 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 9199 chr10 112002732 . ACC ACCCC 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 9200 chr10 112008944 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9201 chr10 112016986 . T TTAAA 3.25 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=2,1,0,1;MQ=50;PV4=1,0.47,1,0.42 PL:DP:SP:GT:GQ 38,0,109:4:0:0/1:41 | |
| 9202 chr10 112039361 . A C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 9203 chr10 112053827 . A G 8.44 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 39,6,0:2:0:1/1:49 | |
| 9204 chr10 112059252 . A ACACAATTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9205 chr10 112059969 . AATTCT A 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 9206 chr10 112063935 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9207 chr10 112068979 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9208 chr10 112072178 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9209 chr10 112075552 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9210 chr10 112078348 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9211 chr10 112078369 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9212 chr10 112141616 . C T 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 9213 chr10 112148604 . C T 8.44 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 39,6,0:2:0:1/1:49 | |
| 9214 chr10 112160921 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9215 chr10 112194000 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9216 chr10 112195132 . C A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 9217 chr10 112199652 . ttct tTCTGAtct 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9218 chr10 112201765 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9219 chr10 112203983 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 9220 chr10 112237388 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9221 chr10 112304991 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9222 chr10 112306436 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 9223 chr10 112311825 . C CTG 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 9224 chr10 112316661 . ca cAGa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9225 chr10 112323187 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9226 chr10 112323774 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9227 chr10 112328617 . AAAACAA AAA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9228 chr10 112328838 . C G 88 . DP=12;AF1=1;CI95=1,1;DP4=0,0,0,12;MQ=48 PL:DP:SP:GT:GQ 121,36,0:12:0:1/1:99 | |
| 9229 chr10 112339816 . a aTGATG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9230 chr10 112349446 . T C 29 . DP=7;AF1=0.5;CI95=0.5,0.5;DP4=0,5,0,2;MQ=48;PV4=1,0.28,0,0.39 PL:DP:SP:GT:GQ 59,0,147:7:0:0/1:62 | |
| 9231 chr10 112361870 . A G 28 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,2,1;MQ=47 PL:DP:SP:GT:GQ 60,9,0:3:0:1/1:63 | |
| 9232 chr10 112364712 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9233 chr10 112377788 . G A 14.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=48 PL:DP:SP:GT:GQ 46,6,0:2:0:1/1:49 | |
| 9234 chr10 112378257 . g gAGTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9235 chr10 112386142 . C T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 9236 chr10 112391966 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9237 chr10 112396899 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 9238 chr10 112449356 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9239 chr10 112488573 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9240 chr10 112499794 . C T 13.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 45,6,0:2:0:1/1:49 | |
| 9241 chr10 112500357 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 9242 chr10 112513869 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9243 chr10 112523438 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9244 chr10 112523459 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9245 chr10 112524264 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9246 chr10 112558867 . G A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 9247 chr10 112569633 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9248 chr10 112571995 . G GTTTTTGGAAT 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 9249 chr10 112574079 . g gTAGTACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9250 chr10 112584661 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 9251 chr10 112593220 . T A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 9252 chr10 112599636 . ttag tTAGtag 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 9253 chr10 112601885 . G C 13.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 9254 chr10 112623889 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9255 chr10 112630699 . C T 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 9256 chr10 112636100 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9257 chr10 112639827 . A G 5.29 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 35,6,0:2:0:1/1:49 | |
| 9258 chr10 112641053 . A G 24 . DP=37;AF1=0.5;CI95=0.5,0.5;DP4=5,10,5,1;MQ=49;PV4=0.063,0.00086,0.0011,1 PL:DP:SP:GT:GQ 54,0,255:21:12:0/1:57 | |
| 9259 chr10 112645985 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9260 chr10 112649240 . A AACACGCATAGC 5.08 . INDEL;DP=7;AF1=0.5;CI95=0.5,0.5;DP4=1,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,73:3:0:0/1:44 | |
| 9261 chr10 112689584 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9262 chr10 112696324 . aaag a 12.7 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9263 chr10 112696452 . C CAA 7.35 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,42:2:0:0/1:43 | |
| 9264 chr10 112701582 . T G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 9265 chr10 112710050 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9266 chr10 112746518 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9267 chr10 112760137 . TA TGTCATGAGTGTGA 7.46 . INDEL;DP=17;AF1=0.5163;CI95=0.5,1;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,12:2:0:0/1:15 | |
| 9268 chr10 112798913 . agtc a 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9269 chr10 112834848 . CTGAG C 4.42 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 9270 chr10 112835960 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9271 chr10 112835968 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9272 chr10 112844475 . A G 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,42:2:0:0/1:33 | |
| 9273 chr10 112856894 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 9274 chr10 112873892 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9275 chr10 112875409 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9276 chr10 112878732 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 9277 chr10 112879726 . CC CCACAC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 9278 chr10 112884745 . G A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 9279 chr10 112889100 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9280 chr10 112908390 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9281 chr10 112924248 . G A 7.8 . DP=2;AF1=0.5012;CI95=0.5,0.5;DP4=1,0,1,0;MQ=40;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,23:2:0:0/1:26 | |
| 9282 chr10 112934220 . A C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 9283 chr10 112944718 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9284 chr10 112948994 . G A 13.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=49 PL:DP:SP:GT:GQ 45,6,0:2:0:1/1:49 | |
| 9285 chr10 112956424 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9286 chr10 112958556 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9287 chr10 112973673 . tta tTAta 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9288 chr10 112977434 . g gCTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9289 chr10 112991967 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 9290 chr10 112999260 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9291 chr10 113032220 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9292 chr10 113065198 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 9293 chr10 113084384 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9294 chr10 113102667 . a aGTATAGG 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=48 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 9295 chr10 113114789 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 9296 chr10 113124501 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9297 chr10 113157181 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9298 chr10 113160380 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9299 chr10 113160793 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 9300 chr10 113161999 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9301 chr10 113196038 . G T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 9302 chr10 113198697 . G GGAGTT 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9303 chr10 113223724 . TT TTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9304 chr10 113232652 . A T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 9305 chr10 113244166 . TA TATAGGCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9306 chr10 113258161 . GCT G 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9307 chr10 113258392 . T TAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9308 chr10 113261069 . a aAATGCCTTCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9309 chr10 113290870 . TG TGGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9310 chr10 113296651 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9311 chr10 113298231 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9312 chr10 113330530 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9313 chr10 113334860 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 9314 chr10 113335560 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9315 chr10 113353479 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9316 chr10 113355051 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 9317 chr10 113359514 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9318 chr10 113388497 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9319 chr10 113394215 . aagaat a 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 9320 chr10 113395544 . TT TTTCTGGCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9321 chr10 113405905 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9322 chr10 113405944 . A ACGGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9323 chr10 113414744 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9324 chr10 113450064 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 9325 chr10 113486544 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 9326 chr10 113503582 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 9327 chr10 113511390 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9328 chr10 113516307 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9329 chr10 113536265 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9330 chr10 113581297 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 9331 chr10 113589839 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 9332 chr10 113609556 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9333 chr10 113622461 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9334 chr10 113638045 . tg tGCGCCCg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9335 chr10 113640429 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9336 chr10 113682482 . C T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 9337 chr10 113694614 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9338 chr10 113731729 . A AGTGGGTGAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9339 chr10 113734997 . T TCCCAATCAA 3.8 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,0,1,0.19 PL:DP:SP:GT:GQ 39,0,83:3:0:0/1:42 | |
| 9340 chr10 113750027 . ACT ACTTTCCCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9341 chr10 113777472 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9342 chr10 113788850 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9343 chr10 113855191 . T A 6.79 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=48 PL:DP:SP:GT:GQ 37,6,0:2:0:1/1:49 | |
| 9344 chr10 113862045 . C CTT 6.56 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 9345 chr10 113877448 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 9346 chr10 113907306 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 9347 chr10 113913325 . T A 3.01 . DP=10;AF1=0.4997;CI95=0.5,0.5;DP4=2,2,2,0;MQ=48;PV4=0.47,0.34,0.00064,0.36 PL:DP:SP:GT:GQ 30,0,85:6:3:0/1:33 | |
| 9348 chr10 113914534 . T G 3.54 . DP=3;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,2;MQ=49;PV4=1,0,1,1 PL:DP:SP:GT:GQ 31,0,40:3:0:0/1:33 | |
| 9349 chr10 113914620 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9350 chr10 113920497 . T A 3.01 . DP=19;AF1=0.4997;CI95=0.5,0.5;DP4=5,2,0,3;MQ=49;PV4=0.17,0.17,7.7e-05,1 PL:DP:SP:GT:GQ 30,0,147:10:8:0/1:33 | |
| 9351 chr10 113932146 . T A 23 . DP=11;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=48 PL:DP:SP:GT:GQ 55,9,0:3:0:1/1:63 | |
| 9352 chr10 113940329 . T C 99 . DP=18;AF1=1;CI95=1,1;DP4=0,0,1,14;MQ=44 PL:DP:SP:GT:GQ 255,45,0:15:0:1/1:99 | |
| 9353 chr10 113957102 . A C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 9354 chr10 113979598 . A T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 9355 chr10 113985733 . A T 5.46 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9356 chr10 113987331 . T TTTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9357 chr10 113998926 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9358 chr10 114010432 . T A 6.98 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,44:2:0:0/1:38 | |
| 9359 chr10 114027494 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9360 chr10 114033907 . CA CAGTAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9361 chr10 114043436 . G A 6.98 . DP=10;AF1=0.4999;CI95=0.5,0.5;DP4=7,0,3,0;MQ=49;PV4=1,0.0036,2.9e-05,1 PL:DP:SP:GT:GQ 36,0,178:10:0:0/1:39 | |
| 9362 chr10 114043541 . G A 34 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=2,3,0,5;MQ=48;PV4=0.44,0.029,0.039,1 PL:DP:SP:GT:GQ 64,0,137:10:4:0/1:67 | |
| 9363 chr10 114053546 . C G 8.65 . DP=27;AF1=0.5;CI95=0.5,0.5;DP4=1,1,3,1;MQ=50;PV4=1,0.013,0.27,1 PL:DP:SP:GT:GQ 38,0,36:6:0:0/1:37 | |
| 9364 chr10 114059330 . TCTCTGTTTTCCTCTGTTTTCC TCTCTGTTTTCC 99 . INDEL;DP=28;AF1=1;CI95=0.5,1;DP4=0,1,0,7;MQ=50;PV4=1,1,1,0.43 PL:DP:SP:GT:GQ 193,9,0:8:0:1/1:63 | |
| 9365 chr10 114059355 . C T 99 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=0,10,0,14;MQ=47;PV4=1,0.0017,4.9e-06,0.17 PL:DP:SP:GT:GQ 181,0,201:24:0:0/1:99 | |
| 9366 chr10 114080450 . T G 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 9367 chr10 114091193 . C T 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 9368 chr10 114094566 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 9369 chr10 114099565 . TA TAGA 7.35 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 9370 chr10 114105401 . TGGG TGGGGG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9371 chr10 114111439 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9372 chr10 114123908 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9373 chr10 114124332 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 9374 chr10 114144244 . C A 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9375 chr10 114155646 . A G 12.3 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 9376 chr10 114160567 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9377 chr10 114165672 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9378 chr10 114169552 . G A 47 . DP=8;AF1=0.5002;CI95=0.5,0.5;DP4=0,1,0,5;MQ=48;PV4=1,0.0084,0.21,0.45 PL:DP:SP:GT:GQ 77,0,32:6:0:0/1:35 | |
| 9379 chr10 114177862 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9380 chr10 114181683 . A G 27.3 . DP=26;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=50 PL:DP:SP:GT:GQ 60,15,0:5:0:1/1:75 | |
| 9381 chr10 114183385 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9382 chr10 114184952 . C CGCG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9383 chr10 114186624 . G A 99 . DP=31;AF1=1;CI95=1,1;DP4=0,0,2,23;MQ=49 PL:DP:SP:GT:GQ 132,75,0:25:0:1/1:99 | |
| 9384 chr10 114193360 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9385 chr10 114199973 . acagt a 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9386 chr10 114205260 . T TCACG 7.35 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 9387 chr10 114224502 . C G 6.98 . DP=4;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,3;MQ=50;PV4=0.25,0,1,0.008 PL:DP:SP:GT:GQ 36,0,38:4:0:0/1:37 | |
| 9388 chr10 114226447 . T G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 9389 chr10 114229728 . gc gCGCTc 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 9390 chr10 114237097 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9391 chr10 114242689 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9392 chr10 114243300 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9393 chr10 114274674 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9394 chr10 114290818 . C T 3.61 . DP=2;AF1=0.9966;CI95=0.5,1;DP4=1,0,0,1;MQ=30;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,1,0:2:0:1/1:23 | |
| 9395 chr10 114292358 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9396 chr10 114309791 . A C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 9397 chr10 114336344 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9398 chr10 114349318 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 9399 chr10 114363043 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9400 chr10 114367672 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9401 chr10 114429764 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9402 chr10 114437560 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 9403 chr10 114444120 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9404 chr10 114450952 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9405 chr10 114458051 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9406 chr10 114458625 . CA CAAA 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 9407 chr10 114479277 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9408 chr10 114483495 . T G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 9409 chr10 114494739 . AAAC A 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 9410 chr10 114502455 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 9411 chr10 114502649 . T TTGTGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9412 chr10 114504870 . cct cCTct 7.36 . INDEL;DP=2;AF1=0.502;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,21:2:0:0/1:24 | |
| 9413 chr10 114508873 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9414 chr10 114518462 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9415 chr10 114532483 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9416 chr10 114533393 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9417 chr10 114533666 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9418 chr10 114538910 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9419 chr10 114541636 . G A 8.65 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9420 chr10 114557817 . GCTC GC 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9421 chr10 114558374 . C CGCTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9422 chr10 114560925 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9423 chr10 114576847 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 9424 chr10 114580088 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9425 chr10 114590128 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9426 chr10 114592618 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 9427 chr10 114637771 . A T 5.56 . DP=2;AF1=0.5162;CI95=0.5,0.5;DP4=1,0,1,0;MQ=43;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,12:2:0:0/1:15 | |
| 9428 chr10 114662907 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9429 chr10 114686826 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9430 chr10 114689764 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 9431 chr10 114730074 . A AAATCTG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9432 chr10 114730325 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 9433 chr10 114744107 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9434 chr10 114757054 . C A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9435 chr10 114761998 . G GAGAAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9436 chr10 114763184 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9437 chr10 114769144 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9438 chr10 114780190 . G A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 9439 chr10 114780518 . G A 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9440 chr10 114780675 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9441 chr10 114782581 . ga gATa 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9442 chr10 114785793 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9443 chr10 114786601 . ATA ATACTCCACTGTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9444 chr10 114792859 . CC CCATGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9445 chr10 114797257 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9446 chr10 114801270 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9447 chr10 114807118 . T TNGCAC 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9448 chr10 114813677 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9449 chr10 114828193 . A C 75 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=43 PL:DP:SP:GT:GQ 107,9,0:3:0:1/1:63 | |
| 9450 chr10 114832526 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9451 chr10 114851779 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9452 chr10 114868994 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9453 chr10 114871809 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9454 chr10 114882671 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9455 chr10 114896762 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 9456 chr10 114899353 . AAGAG AAG 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 9457 chr10 114922125 . T TAGTCACCCCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9458 chr10 114925758 . T C,G 6.02 . DP=27;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=49 PL:DP:SP:GT:GQ 48,18,35,12,0,35:3:0:1/1:49 | |
| 9459 chr10 114974357 . gg gGGCTAg 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 9460 chr10 114982945 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9461 chr10 114986346 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 9462 chr10 115005439 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9463 chr10 115033181 . GA GACCAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9464 chr10 115035732 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9465 chr10 115037423 . ct cTGTt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9466 chr10 115041633 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9467 chr10 115057518 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9468 chr10 115075238 . G T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9469 chr10 115080538 . T TC 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 9470 chr10 115080677 . G GGA 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 9471 chr10 115091632 . GGTGTG GG 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 9472 chr10 115094710 . G C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 9473 chr10 115116150 . agagtt aGAGTTgagtt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9474 chr10 115126806 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9475 chr10 115141019 . A ATC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9476 chr10 115149159 . T TCCG 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 9477 chr10 115157664 . T G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9478 chr10 115164563 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 9479 chr10 115168602 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9480 chr10 115190767 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9481 chr10 115242531 . T G 3.01 . DP=11;AF1=0.4997;CI95=0.5,0.5;DP4=2,1,1,1;MQ=50;PV4=1,0.12,0,1 PL:DP:SP:GT:GQ 30,0,99:5:0:0/1:33 | |
| 9482 chr10 115242679 . C T 36 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=7,5,1,3;MQ=47;PV4=0.57,0.00089,0.23,0.094 PL:DP:SP:GT:GQ 66,0,255:16:2:0/1:69 | |
| 9483 chr10 115242720 . T A 16.1 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=2,3,3,2;MQ=44;PV4=1,0.0074,0.047,1 PL:DP:SP:GT:GQ 46,0,159:10:0:0/1:49 | |
| 9484 chr10 115251784 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9485 chr10 115261436 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9486 chr10 115283086 . ctatgca c 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 9487 chr10 115284772 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9488 chr10 115290563 . A G 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9489 chr10 115290564 . T C 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9490 chr10 115302862 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 9491 chr10 115307170 . G T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 9492 chr10 115313512 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9493 chr10 115323261 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 9494 chr10 115328202 . C T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 9495 chr10 115332502 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 9496 chr10 115336204 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9497 chr10 115338305 . T C 47 . DP=21;AF1=0.5;CI95=0.5,0.5;DP4=13,0,7,0;MQ=49;PV4=1,1.7e-08,0.00076,1 PL:DP:SP:GT:GQ 77,0,230:20:0:0/1:80 | |
| 9498 chr10 115339926 . C CTAATAGATA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9499 chr10 115340845 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9500 chr10 115341545 . G C 16.1 . DP=7;AF1=0.5;CI95=0.5,0.5;DP4=3,0,3,0;MQ=49;PV4=1,0.097,0.22,0.12 PL:DP:SP:GT:GQ 46,0,77:6:0:0/1:49 | |
| 9501 chr10 115343803 . C T 75 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=43 PL:DP:SP:GT:GQ 107,9,0:3:0:1/1:63 | |
| 9502 chr10 115349397 . AGGGG AGGG 91.2 . INDEL;DP=19;AF1=1;CI95=0.5,1;DP4=1,1,11,2;MQ=50;PV4=0.37,1,1,1 PL:DP:SP:GT:GQ 130,6,0:15:4:1/1:49 | |
| 9503 chr10 115370274 . T C 72 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=2,11,2,2;MQ=49;PV4=0.22,1.7e-05,4.5e-14,1 PL:DP:SP:GT:GQ 102,0,255:17:7:0/1:99 | |
| 9504 chr10 115375275 . c cATCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9505 chr10 115375528 . C A 99 . DP=24;AF1=0.5;CI95=0.5,0.5;DP4=6,5,4,6;MQ=47;PV4=0.67,0.15,2.3e-11,0.48 PL:DP:SP:GT:GQ 246,0,255:21:2:0/1:99 | |
| 9506 chr10 115377190 . T G 70.5 . DP=14;AF1=1;CI95=0.5,1;DP4=1,0,9,0;MQ=45;PV4=1,1,0.2,0.32 PL:DP:SP:GT:GQ 102,7,0:10:0:1/1:57 | |
| 9507 chr10 115389551 . TATACCA TA 5.1 . INDEL;DP=5;AF1=0.5031;CI95=0.5,0.5;DP4=0,1,0,2;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,19:3:0:0/1:22 | |
| 9508 chr10 115393929 . G A 3.54 . DP=30;AF1=0.4998;CI95=0.5,0.5;DP4=4,9,2,3;MQ=50;PV4=1,5.8e-08,0.054,1 PL:DP:SP:GT:GQ 31,0,255:18:0:0/1:34 | |
| 9509 chr10 115405664 . C T 54 . DP=23;AF1=0.5;CI95=0.5,0.5;DP4=10,5,5,1;MQ=49;PV4=0.62,0.00063,5e-05,0.2 PL:DP:SP:GT:GQ 84,0,255:21:2:0/1:87 | |
| 9510 chr10 115411614 . A G 99 . DP=38;AF1=0.5;CI95=0.5,0.5;DP4=7,10,7,8;MQ=49;PV4=1,2.2e-06,0.038,1 PL:DP:SP:GT:GQ 148,0,255:32:0:0/1:99 | |
| 9511 chr10 115428413 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9512 chr10 115437992 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9513 chr10 115452884 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9514 chr10 115457264 . T G 6.2 . DP=18;AF1=0.4999;CI95=0.5,0.5;DP4=12,1,4,0;MQ=49;PV4=1,2.6e-05,4.8e-14,1 PL:DP:SP:GT:GQ 35,0,255:17:0:0/1:38 | |
| 9515 chr10 115459462 . cat cATat 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9516 chr10 115508039 . tc tCCCAc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9517 chr10 115508768 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9518 chr10 115514955 . G C 5.47 . DP=5;AF1=0.5012;CI95=0.5,0.5;DP4=1,0,2,0;MQ=49;PV4=1,0.17,0.33,1 PL:DP:SP:GT:GQ 34,0,23:3:0:0/1:26 | |
| 9519 chr10 115516551 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 9520 chr10 115546288 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 9521 chr10 115553835 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9522 chr10 115562177 . AA AAAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9523 chr10 115577200 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9524 chr10 115587939 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9525 chr10 115589245 . gcc gCCCATGCCAcc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9526 chr10 115589809 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9527 chr10 115592004 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9528 chr10 115593791 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9529 chr10 115601169 . A G 7.8 . DP=5;AF1=0.5;CI95=0.5,0.5;DP4=2,0,2,0;MQ=47;PV4=1,0.17,0.044,1 PL:DP:SP:GT:GQ 37,0,51:4:0:0/1:40 | |
| 9530 chr10 115627331 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9531 chr10 115628611 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9532 chr10 115632018 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9533 chr10 115653053 . T C 46.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=43 PL:DP:SP:GT:GQ 78,6,0:2:0:1/1:49 | |
| 9534 chr10 115655326 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9535 chr10 115659798 . a aG 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 9536 chr10 115660000 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9537 chr10 115692211 . g gACC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9538 chr10 115709130 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9539 chr10 115711261 . ttt tTTGTCGCCAtt 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=47 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 9540 chr10 115711824 . ct cTAGGAGAGt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9541 chr10 115731474 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9542 chr10 115733456 . gggtgg gGGTggtgg 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 9543 chr10 115736913 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9544 chr10 115755910 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9545 chr10 115756234 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9546 chr10 115759707 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9547 chr10 115777260 . C T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 9548 chr10 115808163 . GG GGGCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9549 chr10 115812907 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9550 chr10 115832408 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 9551 chr10 115838411 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9552 chr10 115844480 . T A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 9553 chr10 115846455 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 9554 chr10 115866131 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9555 chr10 115876208 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 9556 chr10 115910773 . T A 5.46 . DP=12;AF1=0.4999;CI95=0.5,0.5;DP4=5,0,3,0;MQ=45;PV4=1,0.15,1,1 PL:DP:SP:GT:GQ 34,0,85:8:0:0/1:37 | |
| 9557 chr10 115957103 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9558 chr10 115964587 . AG AGCG 6.57 . INDEL;DP=6;AF1=0.5025;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 43,0,20:2:0:0/1:23 | |
| 9559 chr10 115967012 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9560 chr10 115967706 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 9561 chr10 115993322 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9562 chr10 116002288 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9563 chr10 116002443 . ct cTt 30.2 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=50 PL:DP:SP:GT:GQ 69,6,0:2:0:1/1:49 | |
| 9564 chr10 116009123 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 9565 chr10 116021155 . T TCC 3.25 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,44:2:0:0/1:40 | |
| 9566 chr10 116032519 . A G 10.2 . DP=21;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 41,6,0:2:0:1/1:49 | |
| 9567 chr10 116034936 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9568 chr10 116035320 . actg aCTGTctg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9569 chr10 116040075 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9570 chr10 116044587 . C T 33 . DP=11;AF1=0.5;CI95=0.5,0.5;DP4=3,0,5,0;MQ=48;PV4=1,0.00024,0.063,0.31 PL:DP:SP:GT:GQ 63,0,102:8:0:0/1:66 | |
| 9571 chr10 116049170 . C T 18.1 . DP=39;AF1=0.5;CI95=0.5,0.5;DP4=9,12,4,3;MQ=50;PV4=0.67,0.00012,0.0024,1 PL:DP:SP:GT:GQ 48,0,255:28:2:0/1:51 | |
| 9572 chr10 116058933 . G A 11.9 . DP=9;AF1=0.5939;CI95=0.5,1;DP4=1,0,2,0;MQ=47;PV4=1,1,0,1 PL:DP:SP:GT:GQ 41,0,5:3:0:0/1:7 | |
| 9573 chr10 116060194 . AGG AGGG 84.5 . INDEL;DP=10;AF1=0.5025;CI95=0.5,0.5;DP4=0,2,0,6;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 122,0,20:8:0:0/1:23 | |
| 9574 chr10 116061092 . A T 3.01 . DP=6;AF1=0.4998;CI95=0.5,0.5;DP4=3,0,2,0;MQ=49;PV4=1,1,0.14,0.016 PL:DP:SP:GT:GQ 30,0,36:5:0:0/1:32 | |
| 9575 chr10 116062073 . C T 73 . DP=20;AF1=0.5;CI95=0.5,0.5;DP4=9,2,8,0;MQ=48;PV4=0.49,6.5e-05,0.00086,0.19 PL:DP:SP:GT:GQ 103,0,255:19:3:0/1:99 | |
| 9576 chr10 116065117 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 9577 chr10 116069463 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9578 chr10 116073136 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9579 chr10 116073696 . C T 80 . DP=36;AF1=0.5;CI95=0.5,0.5;DP4=10,12,5,4;MQ=49;PV4=0.7,1.6e-05,2.2e-06,0.43 PL:DP:SP:GT:GQ 110,0,255:31:2:0/1:99 | |
| 9580 chr10 116075271 . TCCCC TCCCCCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9581 chr10 116079178 . A ATGTCAGG 7.35 . INDEL;DP=2;AF1=0.5001;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,36:2:0:0/1:38 | |
| 9582 chr10 116080774 . C T 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9583 chr10 116081460 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9584 chr10 116109196 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9585 chr10 116125373 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9586 chr10 116129740 . G C 4.14 . DP=2;AF1=0.5014;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,22:2:0:0/1:25 | |
| 9587 chr10 116130194 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9588 chr10 116135901 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9589 chr10 116148045 . aacacacacacacacacac aacacacacacacac 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9590 chr10 116148061 . C G 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9591 chr10 116154637 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9592 chr10 116159740 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9593 chr10 116165124 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9594 chr10 116180763 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9595 chr10 116195798 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9596 chr10 116195841 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9597 chr10 116197925 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9598 chr10 116199010 . C G 81 . DP=26;AF1=0.5;CI95=0.5,0.5;DP4=3,5,0,9;MQ=47;PV4=0.082,0.027,7.7e-06,1 PL:DP:SP:GT:GQ 111,0,202:17:11:0/1:99 | |
| 9599 chr10 116203801 . A C 80 . DP=42;AF1=0.5;CI95=0.5,0.5;DP4=15,12,7,7;MQ=50;PV4=0.75,9.1e-13,0.023,1 PL:DP:SP:GT:GQ 110,0,255:41:1:0/1:99 | |
| 9600 chr10 116214155 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 9601 chr10 116217872 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 9602 chr10 116225365 . G A 26 . DP=6;AF1=0.5;CI95=0.5,0.5;DP4=2,0,2,0;MQ=43;PV4=1,0.17,0.064,1 PL:DP:SP:GT:GQ 56,0,77:4:0:0/1:59 | |
| 9603 chr10 116241619 . AC ACTC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 9604 chr10 116245001 . AGA AGATGA 7.35 . INDEL;DP=3;AF1=0.5003;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,29:2:0:0/1:32 | |
| 9605 chr10 116250540 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 9606 chr10 116255160 . T C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 9607 chr10 116262037 . G GTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9608 chr10 116262583 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9609 chr10 116285718 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9610 chr10 116288411 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9611 chr10 116296744 . TT TTGT 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9612 chr10 116300218 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 9613 chr10 116307504 . A G 99 . DP=25;AF1=1;CI95=1,1;DP4=0,0,6,16;MQ=44 PL:DP:SP:GT:GQ 255,66,0:22:0:1/1:99 | |
| 9614 chr10 116313037 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9615 chr10 116315794 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9616 chr10 116331253 . CAT CATAT 7.35 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,43:2:0:0/1:43 | |
| 9617 chr10 116335246 . G A 56.2 . DP=49;AF1=0.7303;CI95=0.5,1;DP4=0,1,2,4;MQ=48;PV4=1,0.4,0.23,1 PL:DP:SP:GT:GQ 85,0,2:7:0:0/1:3 | |
| 9618 chr10 116353404 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9619 chr10 116358132 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9620 chr10 116359971 . C CTATA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9621 chr10 116363001 . TA TACAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9622 chr10 116377390 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9623 chr10 116389375 . G GAGGTATAC 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,2,1,0;MQ=50;PV4=0.33,1,1,0.39 PL:DP:SP:GT:GQ 41,0,74:3:0:0/1:44 | |
| 9624 chr10 116394310 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9625 chr10 116396863 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 9626 chr10 116416792 . T G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9627 chr10 116418107 . A C 3.54 . DP=4;AF1=0.4998;CI95=0.5,0.5;DP4=0,3,0,1;MQ=48;PV4=1,0.49,0,1 PL:DP:SP:GT:GQ 31,0,105:4:0:0/1:34 | |
| 9628 chr10 116433340 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9629 chr10 116442965 . TT TTGTGACACGGAT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 9630 chr10 116450309 . T G 5.46 . DP=9;AF1=0.4999;CI95=0.5,0.5;DP4=0,4,0,2;MQ=44;PV4=1,0.35,1,1 PL:DP:SP:GT:GQ 34,0,61:6:0:0/1:37 | |
| 9631 chr10 116452719 . A AACC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9632 chr10 116488623 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9633 chr10 116493031 . C G 6.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 9634 chr10 116500446 . A G,C 4.13 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,2,0;MQ=46 PL:DP:SP:GT:GQ 43,14,32,11,0,32:2:0:1/1:41 | |
| 9635 chr10 116521740 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9636 chr10 116526681 . C CG 3.25 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9637 chr10 116526719 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 9638 chr10 116531532 . T TGCGCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9639 chr10 116539262 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 9640 chr10 116561701 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9641 chr10 116570722 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 9642 chr10 116576100 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9643 chr10 116579866 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9644 chr10 116587990 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9645 chr10 116588471 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 9646 chr10 116588887 . A T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 9647 chr10 116593194 . A G 99 . DP=41;AF1=0.5;CI95=0.5,0.5;DP4=1,14,1,21;MQ=48;PV4=1,2.5e-10,1.7e-07,1 PL:DP:SP:GT:GQ 142,0,237:37:0:0/1:99 | |
| 9648 chr10 116601675 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9649 chr10 116607931 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9650 chr10 116614830 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9651 chr10 116615503 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 9652 chr10 116635924 . T G 3.55 . DP=2;AF1=0.5003;CI95=0.5,0.5;DP4=1,0,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,27:2:0:0/1:29 | |
| 9653 chr10 116640416 . g gTT 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9654 chr10 116660567 . C T 4.61 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 34,6,0:2:0:1/1:49 | |
| 9655 chr10 116665710 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9656 chr10 116667613 . g gTGGAA 5.8 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=49 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 9657 chr10 116697960 . G C 99 . DP=15;AF1=1;CI95=0.5,1;DP4=0,1,13,0;MQ=47;PV4=0.071,1,0.31,1 PL:DP:SP:GT:GQ 141,18,0:14:0:1/1:90 | |
| 9658 chr10 116702545 . T G 37.5 . DP=14;AF1=1;CI95=0.5,1;DP4=0,1,0,6;MQ=49;PV4=1,1,0.14,0.49 PL:DP:SP:GT:GQ 69,7,0:7:0:1/1:57 | |
| 9659 chr10 116708504 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9660 chr10 116719983 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9661 chr10 116734069 . G C 41.1 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,6,0;MQ=50 PL:DP:SP:GT:GQ 74,18,0:6:0:1/1:90 | |
| 9662 chr10 116735245 . TTG TTGTGGTGAGTG 12.7 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9663 chr10 116735755 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9664 chr10 116741516 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9665 chr10 116749479 . T A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 9666 chr10 116755717 . TG TGAG 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9667 chr10 116763715 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 9668 chr10 116799108 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 9669 chr10 116868379 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9670 chr10 116870182 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9671 chr10 116909252 . ccttt c 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 9672 chr10 116931101 . CT CTTT 99 . INDEL;DP=11;AF1=0.95;CI95=0.5,1;DP4=0,1,0,5;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 149,0,0:6:0:1/1:10 | |
| 9673 chr10 116931104 . AT ATTT 9.04 . INDEL;DP=11;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,2;MQ=50;PV4=1,0.41,1,1 PL:DP:SP:GT:GQ 46,0,80:5:0:0/1:49 | |
| 9674 chr10 116949281 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9675 chr10 116994907 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9676 chr10 117032670 . c cTGG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 9677 chr10 117040121 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9678 chr10 117066606 . C CGTTCGGCGTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9679 chr10 117066712 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 9680 chr10 117074475 . TG TGCCAATTGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9681 chr10 117075175 . G A 88 . DP=31;AF1=1;CI95=1,1;DP4=0,0,5,3;MQ=49 PL:DP:SP:GT:GQ 121,24,0:8:0:1/1:96 | |
| 9682 chr10 117138898 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9683 chr10 117146785 . g gTTCT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 9684 chr10 117211410 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9685 chr10 117215672 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9686 chr10 117217619 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9687 chr10 117217627 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9688 chr10 117223893 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9689 chr10 117244525 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9690 chr10 117275581 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9691 chr10 117308924 . T G 18.2 . DP=10;AF1=0.5102;CI95=0.5,0.5;DP4=2,0,3,0;MQ=49;PV4=1,1,0.0062,1 PL:DP:SP:GT:GQ 48,0,14:5:0:0/1:17 | |
| 9692 chr10 117337716 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9693 chr10 117351231 . ttg tTGATCtg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9694 chr10 117352400 . C CCTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9695 chr10 117354786 . C A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9696 chr10 117393948 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 9697 chr10 117412634 . A AAT 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 9698 chr10 117446653 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9699 chr10 117464897 . AA AATCAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9700 chr10 117489863 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 9701 chr10 117545915 . cc cCAc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9702 chr10 117549888 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 9703 chr10 117567734 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9704 chr10 117573545 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9705 chr10 117575279 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9706 chr10 117577758 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 9707 chr10 117586051 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9708 chr10 117587284 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9709 chr10 117599785 . TG TGGGG 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 9710 chr10 117602947 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 9711 chr10 117603793 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 9712 chr10 117620211 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9713 chr10 117626955 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9714 chr10 117661191 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9715 chr10 117666296 . A G 23.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=46 PL:DP:SP:GT:GQ 55,6,0:2:0:1/1:49 | |
| 9716 chr10 117671415 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 9717 chr10 117688360 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9718 chr10 117704135 . GC GTGCGCAC 12.7 . INDEL;DP=6;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9719 chr10 117725098 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9720 chr10 117735669 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9721 chr10 117737650 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9722 chr10 117754748 . A C 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9723 chr10 117760486 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9724 chr10 117766131 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 9725 chr10 117776631 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 9726 chr10 117779103 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9727 chr10 117800353 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 9728 chr10 117802761 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 9729 chr10 117805000 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9730 chr10 117806063 . G A 4.13 . DP=2;AF1=0.5001;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,30:2:0:0/1:31 | |
| 9731 chr10 117826730 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9732 chr10 117857120 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9733 chr10 117858945 . T A 4.77 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9734 chr10 117865581 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 9735 chr10 117881812 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9736 chr10 117900226 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 9737 chr10 117903454 . G A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 9738 chr10 117929046 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9739 chr10 117929864 . C CGGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9740 chr10 117931906 . G T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 9741 chr10 117932373 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9742 chr10 117937234 . ATCT AT 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 9743 chr10 117938579 . GCA GCACCACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9744 chr10 117961796 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9745 chr10 117969264 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 9746 chr10 117972486 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9747 chr10 117991955 . AAAAA AAAAACTCAAAA 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=49 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 9748 chr10 118009215 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9749 chr10 118009255 . c cCTAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9750 chr10 118013098 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9751 chr10 118016603 . ACCAGG A 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9752 chr10 118034631 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9753 chr10 118037690 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 9754 chr10 118040510 . G A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 9755 chr10 118042860 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9756 chr10 118050150 . T TCTCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9757 chr10 118078989 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9758 chr10 118117337 . G T 3.64 . DP=4;AF1=0.5205;CI95=0.5,0.5;DP4=1,0,2,0;MQ=49;PV4=1,1,0,0.2 PL:DP:SP:GT:GQ 31,0,11:3:0:0/1:14 | |
| 9759 chr10 118145474 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 9760 chr10 118197834 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9761 chr10 118201176 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9762 chr10 118220500 . T G 28 . DP=29;AF1=0.5;CI95=0.5,0.5;DP4=10,2,0,9;MQ=49;PV4=0.00022,1.4e-05,0.0031,1 PL:DP:SP:GT:GQ 58,0,244:21:37:0/1:61 | |
| 9763 chr10 118227839 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 9764 chr10 118228723 . A C 8.64 . DP=13;AF1=0.5;CI95=0.5,0.5;DP4=4,3,0,3;MQ=48;PV4=0.2,0.054,0.012,1 PL:DP:SP:GT:GQ 38,0,204:10:7:0/1:41 | |
| 9765 chr10 118231853 . C G 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 9766 chr10 118234918 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9767 chr10 118242652 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9768 chr10 118284617 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9769 chr10 118305638 . G A 12.3 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=2,6,5,0;MQ=49;PV4=0.021,0.012,0.042,1 PL:DP:SP:GT:GQ 42,0,178:13:17:0/1:45 | |
| 9770 chr10 118313265 . T C 99 . DP=16;AF1=0.5032;CI95=0.5,0.5;DP4=1,1,10,2;MQ=47;PV4=0.4,0.37,0.073,1 PL:DP:SP:GT:GQ 171,0,19:14:4:0/1:22 | |
| 9771 chr10 118327040 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9772 chr10 118327140 . C T 21.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 53,6,0:2:0:1/1:49 | |
| 9773 chr10 118351905 . A C 4.13 . DP=29;AF1=0.4998;CI95=0.5,0.5;DP4=10,4,6,0;MQ=50;PV4=0.27,0.00065,0.029,1 PL:DP:SP:GT:GQ 32,0,255:20:6:0/1:35 | |
| 9774 chr10 118354347 . C A 5.46 . DP=33;AF1=0.4999;CI95=0.5,0.5;DP4=0,12,0,5;MQ=49;PV4=1,0.084,0.01,1 PL:DP:SP:GT:GQ 34,0,131:17:0:0/1:37 | |
| 9775 chr10 118357490 . C T 8.64 . DP=38;AF1=0.5;CI95=0.5,0.5;DP4=7,18,7,0;MQ=49;PV4=0.001,2.5e-05,0.0046,1 PL:DP:SP:GT:GQ 38,0,255:32:30:0/1:41 | |
| 9776 chr10 118362209 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9777 chr10 118363642 . T C 28 . DP=29;AF1=0.5;CI95=0.5,0.5;DP4=1,17,0,6;MQ=49;PV4=1,1.9e-08,2.3e-05,1 PL:DP:SP:GT:GQ 58,0,255:24:0:0/1:61 | |
| 9778 chr10 118364818 . G T 7.8 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=9,0,4,0;MQ=49;PV4=1,7.2e-05,0.042,1 PL:DP:SP:GT:GQ 37,0,204:13:0:0/1:40 | |
| 9779 chr10 118364842 . A G 39 . DP=30;AF1=0.5;CI95=0.5,0.5;DP4=18,0,10,0;MQ=49;PV4=1,1.6e-13,0.012,0.36 PL:DP:SP:GT:GQ 69,0,243:28:0:0/1:72 | |
| 9780 chr10 118364931 . T C 99 . DP=58;AF1=0.5;CI95=0.5,0.5;DP4=10,14,8,21;MQ=48;PV4=0.38,1.2e-13,2.8e-14,1 PL:DP:SP:GT:GQ 216,0,255:53:4:0/1:99 | |
| 9781 chr10 118392638 . G GAA 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 9782 chr10 118393983 . ct cTGAGCTCAAt 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9783 chr10 118414725 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 9784 chr10 118440642 . AT ATCCT 7.52 . INDEL;DP=7;AF1=0.5263;CI95=0.5,1;DP4=1,0,1,0;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,10:2:0:0/1:13 | |
| 9785 chr10 118451699 . T C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 9786 chr10 118452099 . C G 6.79 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 37,6,0:2:0:1/1:49 | |
| 9787 chr10 118458651 . A AT 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 9788 chr10 118463758 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 9789 chr10 118469668 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9790 chr10 118481502 . T A 18.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=46 PL:DP:SP:GT:GQ 50,6,0:2:0:1/1:49 | |
| 9791 chr10 118482154 . C CTCAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9792 chr10 118483798 . ac aCc 3.25 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9793 chr10 118503735 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9794 chr10 118549362 . ACGG A 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 9795 chr10 118576665 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9796 chr10 118586956 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9797 chr10 118606571 . C G 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 9798 chr10 118607790 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9799 chr10 118626989 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9800 chr10 118632170 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9801 chr10 118636548 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9802 chr10 118640035 . TT TTGCAGCGATACT 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=46 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 9803 chr10 118646129 . G C 85 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=0,11,0,5;MQ=48;PV4=1,0.33,4.3e-09,1 PL:DP:SP:GT:GQ 115,0,210:16:0:0/1:99 | |
| 9804 chr10 118669460 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 9805 chr10 118671205 . T C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 9806 chr10 118671945 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9807 chr10 118684421 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 9808 chr10 118689390 . C T 3.01 . DP=20;AF1=0.4997;CI95=0.5,0.5;DP4=5,1,3,0;MQ=49;PV4=1,1,0.37,1 PL:DP:SP:GT:GQ 30,0,70:9:0:0/1:33 | |
| 9809 chr10 118706803 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9810 chr10 118714498 . T C 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9811 chr10 118718170 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9812 chr10 118718560 . ACTTTT A 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9813 chr10 118728739 . c cCCTG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 9814 chr10 118742050 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9815 chr10 118743015 . C A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9816 chr10 118744684 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9817 chr10 118782346 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9818 chr10 118797220 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 9819 chr10 118801175 . TT TTGTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9820 chr10 118804462 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9821 chr10 118823887 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9822 chr10 118825882 . t tGTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9823 chr10 118851302 . T C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 9824 chr10 118853636 . AC ACGC 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9825 chr10 118868514 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 9826 chr10 118875357 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9827 chr10 118891641 . C CTCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9828 chr10 118891994 . A G 38.1 . DP=10;AF1=1;CI95=0.5,1;DP4=0,0,0,6;MQ=50 PL:DP:SP:GT:GQ 71,18,0:6:0:1/1:90 | |
| 9829 chr10 118903927 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9830 chr10 118947693 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9831 chr10 118963573 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9832 chr10 118963649 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 9833 chr10 118968964 . G A 8.64 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=3,0,2,1;MQ=50;PV4=1,0.09,0.058,1 PL:DP:SP:GT:GQ 38,0,67:6:0:0/1:41 | |
| 9834 chr10 118994530 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9835 chr10 118995834 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9836 chr10 119004224 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9837 chr10 119014023 . C T 13.9 . DP=21;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 45,6,0:2:0:1/1:49 | |
| 9838 chr10 119014284 . T TCATCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9839 chr10 119014695 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 9840 chr10 119014931 . C T 31 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=8,4,6,1;MQ=47;PV4=0.6,1.2e-07,1.7e-05,1 PL:DP:SP:GT:GQ 61,0,255:19:2:0/1:64 | |
| 9841 chr10 119014948 . C A 99 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=8,3,8,1;MQ=47;PV4=0.59,0.082,1.4e-05,1 PL:DP:SP:GT:GQ 182,0,255:20:2:0/1:99 | |
| 9842 chr10 119023332 . AT ATCGCTT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 9843 chr10 119023435 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9844 chr10 119023838 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9845 chr10 119029744 . G A 99 . DP=56;AF1=0.5;CI95=0.5,0.5;DP4=10,26,5,12;MQ=49;PV4=1,9.4e-19,2.4e-10,1 PL:DP:SP:GT:GQ 163,0,255:53:0:0/1:99 | |
| 9846 chr10 119039336 . tg tGGg 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 9847 chr10 119087925 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9848 chr10 119130231 . C T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 9849 chr10 119136218 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9850 chr10 119140655 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9851 chr10 119151095 . T C 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,43:2:0:0/1:35 | |
| 9852 chr10 119175475 . g gCA 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 9853 chr10 119193945 . C G 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,1;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 9854 chr10 119194305 . T TCTCGTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9855 chr10 119203946 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9856 chr10 119206785 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9857 chr10 119214394 . tg tGg 38.2 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=50 PL:DP:SP:GT:GQ 77,6,0:2:0:1/1:49 | |
| 9858 chr10 119241668 . TGG T 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 9859 chr10 119268466 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9860 chr10 119268947 . G C 3.54 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,32:2:0:0/1:31 | |
| 9861 chr10 119279439 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9862 chr10 119281950 . C G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 9863 chr10 119290791 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 9864 chr10 119291535 . TC TCC 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9865 chr10 119315736 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9866 chr10 119352098 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9867 chr10 119364133 . T C 6.28 . DP=2;AF1=0.5128;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,13:2:0:0/1:16 | |
| 9868 chr10 119369569 . C CA 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 9869 chr10 119390691 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9870 chr10 119391701 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9871 chr10 119399086 . agtactgt agt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9872 chr10 119410944 . A ATCCC 3.28 . INDEL;DP=2;AF1=0.5063;CI95=0.5,0.5;DP4=0,1,0,1;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,16:2:0:0/1:19 | |
| 9873 chr10 119422504 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9874 chr10 119437904 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 9875 chr10 119438750 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9876 chr10 119453475 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 9877 chr10 119459466 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 9878 chr10 119465294 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9879 chr10 119473376 . TCC T 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 9880 chr10 119476712 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 9881 chr10 119482609 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 9882 chr10 119483015 . G C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 9883 chr10 119484898 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9884 chr10 119493322 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9885 chr10 119500180 . TAG TAGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9886 chr10 119507027 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9887 chr10 119509897 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 9888 chr10 119522605 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9889 chr10 119538097 . gg gGTATACCg 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,83:3:0:0/1:44 | |
| 9890 chr10 119543777 . T TATC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9891 chr10 119555071 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9892 chr10 119570412 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9893 chr10 119571962 . c cG 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 9894 chr10 119591071 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9895 chr10 119616353 . g gCGCGGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9896 chr10 119631093 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9897 chr10 119645713 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9898 chr10 119654030 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 9899 chr10 119689840 . ta tAAGAGAACa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9900 chr10 119700522 . T A 8.65 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9901 chr10 119713884 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 9902 chr10 119720987 . CAGG C 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9903 chr10 119768551 . C T 99 . DP=37;AF1=0.5;CI95=0.5,0.5;DP4=13,6,12,5;MQ=49;PV4=1,1.2e-15,0.00012,1 PL:DP:SP:GT:GQ 154,0,255:36:0:0/1:99 | |
| 9904 chr10 119785566 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9905 chr10 119799888 . G C 23 . DP=33;AF1=0.5;CI95=0.5,0.5;DP4=4,13,5,0;MQ=49;PV4=0.0048,0.051,4.5e-05,1 PL:DP:SP:GT:GQ 53,0,255:22:23:0/1:56 | |
| 9906 chr10 119813987 . G GGC 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 9907 chr10 119814200 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 9908 chr10 119825716 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9909 chr10 119828044 . TC TCTCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9910 chr10 119831018 . A ACTCT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 9911 chr10 119843458 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9912 chr10 119896022 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 9913 chr10 119900188 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9914 chr10 119903206 . t tCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9915 chr10 119910270 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 9916 chr10 119917152 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9917 chr10 119945245 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9918 chr10 119951691 . A T 3.03 . DP=2;AF1=0.5037;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,18:2:0:0/1:21 | |
| 9919 chr10 119952610 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 9920 chr10 119968814 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9921 chr10 119975583 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9922 chr10 119998025 . C CCAACTCGAGAG 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=47 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 9923 chr10 120020188 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 9924 chr10 120040462 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9925 chr10 120069954 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9926 chr10 120083868 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9927 chr10 120098580 . CT CTGCGAAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9928 chr10 120116209 . TGGG TGGGGTGGGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9929 chr10 120122568 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9930 chr10 120126868 . a aCGTGCTGCGAGTCC 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 9931 chr10 120152965 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9932 chr10 120159905 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9933 chr10 120162348 . C G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 9934 chr10 120205219 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9935 chr10 120205245 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9936 chr10 120217116 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9937 chr10 120217168 . T A 3.02 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9938 chr10 120217774 . A T 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9939 chr10 120226125 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 9940 chr10 120232972 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9941 chr10 120275275 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9942 chr10 120306289 . G C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 9943 chr10 120309604 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9944 chr10 120326489 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9945 chr10 120348052 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9946 chr10 120354818 . C T 20 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,5;MQ=49;PV4=1,0.01,0.072,1 PL:DP:SP:GT:GQ 50,0,83:8:0:0/1:53 | |
| 9947 chr10 120370867 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 9948 chr10 120379106 . A G 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9949 chr10 120387042 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9950 chr10 120394061 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9951 chr10 120400354 . A C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9952 chr10 120423772 . ATG ATGCCGTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9953 chr10 120427726 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9954 chr10 120430484 . CA CAA 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 9955 chr10 120512469 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 9956 chr10 120526300 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9957 chr10 120529807 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 9958 chr10 120531663 . c cA 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 9959 chr10 120539884 . ag aGCg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9960 chr10 120541397 . TCCC TC 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9961 chr10 120545596 . TT TTCGATCAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9962 chr10 120572174 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 9963 chr10 120580420 . G GGAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9964 chr10 120584211 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9965 chr10 120588395 . GTGA GTGAAGATGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9966 chr10 120611703 . C A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 9967 chr10 120670861 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9968 chr10 120692771 . T C 15.1 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=0,9,0,3;MQ=48;PV4=1,0.0036,0.00044,0.44 PL:DP:SP:GT:GQ 45,0,202:12:0:0/1:48 | |
| 9969 chr10 120702798 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9970 chr10 120703871 . G GACCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9971 chr10 120704952 . A G 10.2 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 41,6,0:2:0:1/1:49 | |
| 9972 chr10 120705581 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9973 chr10 120708406 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9974 chr10 120713749 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9975 chr10 120721006 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 9976 chr10 120721703 . A T 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,42:2:0:0/1:39 | |
| 9977 chr10 120732375 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9978 chr10 120770063 . AA AAGTCTCTGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9979 chr10 120786954 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 9980 chr10 120797989 . T C 7.8 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,3;MQ=47;PV4=1,0.35,1,1 PL:DP:SP:GT:GQ 37,0,38:6:0:0/1:37 | |
| 9981 chr10 120801854 . A T 62 . DP=45;AF1=0.5;CI95=0.5,0.5;DP4=16,10,7,0;MQ=48;PV4=0.073,1,3.1e-17,1 PL:DP:SP:GT:GQ 92,0,255:33:11:0/1:95 | |
| 9982 chr10 120803114 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 9983 chr10 120814780 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9984 chr10 120818609 . C T 14.7 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=50 PL:DP:SP:GT:GQ 47,12,0:4:0:1/1:72 | |
| 9985 chr10 120829071 . G C 33 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=7,8,9,0;MQ=49;PV4=0.0095,6.5e-12,0.0049,0.32 PL:DP:SP:GT:GQ 63,0,255:24:20:0/1:66 | |
| 9986 chr10 120832894 . T C 11.3 . DP=10;AF1=0.5;CI95=0.5,0.5;DP4=4,0,4,0;MQ=50;PV4=1,2.4e-06,0.012,1 PL:DP:SP:GT:GQ 41,0,134:8:0:0/1:44 | |
| 9987 chr10 120840807 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 9988 chr10 120840821 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 9989 chr10 120852198 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 9990 chr10 120869980 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9991 chr10 120871415 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 9992 chr10 120882871 . G T 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 9993 chr10 120902744 . A ATC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 9994 chr10 120917445 . G A 74 . DP=47;AF1=0.5;CI95=0.5,0.5;DP4=6,12,5,8;MQ=50;PV4=1,6.2e-09,0.0023,1 PL:DP:SP:GT:GQ 104,0,255:31:0:0/1:99 | |
| 9995 chr10 120919246 . T C 99 . DP=29;AF1=0.502;CI95=0.5,0.5;DP4=1,2,8,14;MQ=50;PV4=1,3.2e-06,0.36,1 PL:DP:SP:GT:GQ 130,0,21:25:0:0/1:24 | |
| 9996 chr10 120919349 . C A 4.77 . DP=6;AF1=0.4999;CI95=0.5,0.5;DP4=0,3,0,2;MQ=48;PV4=1,0.14,0.014,1 PL:DP:SP:GT:GQ 33,0,86:5:0:0/1:36 | |
| 9997 chr10 120919354 . TC TCAC 5.08 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,1,1,0.3 PL:DP:SP:GT:GQ 41,0,77:3:0:0/1:44 | |
| 9998 chr10 120925491 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 9999 chr10 120927731 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10000 chr10 120928092 . A G 8.64 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=0,5,0,3;MQ=49;PV4=1,1,0.11,1 PL:DP:SP:GT:GQ 38,0,65:8:0:0/1:41 | |
| 10001 chr10 120933324 . G A 9.31 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 10002 chr10 120933901 . T C 41 . DP=13;AF1=1;CI95=1,1;DP4=0,0,11,0;MQ=50 PL:DP:SP:GT:GQ 74,33,0:11:0:1/1:99 | |
| 10003 chr10 120934010 . A G 5.46 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,44:2:0:0/1:37 | |
| 10004 chr10 120956770 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10005 chr10 120978463 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10006 chr10 120990839 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10007 chr10 120991835 . t tACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10008 chr10 121003609 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 10009 chr10 121022132 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10010 chr10 121027908 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10011 chr10 121058275 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10012 chr10 121060842 . g gAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10013 chr10 121062536 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10014 chr10 121064697 . GCTCC GC 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10015 chr10 121075469 . G T 4.14 . DP=2;AF1=0.5024;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,20:2:0:0/1:23 | |
| 10016 chr10 121087588 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10017 chr10 121097528 . tttc t 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 10018 chr10 121161763 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10019 chr10 121168066 . T C 7.8 . DP=2;AF1=0.5004;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,27:2:0:0/1:30 | |
| 10020 chr10 121172130 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10021 chr10 121182972 . TGC TGCGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10022 chr10 121188306 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10023 chr10 121191462 . T C 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10024 chr10 121199189 . T C 51 . DP=17;AF1=1;CI95=1,1;DP4=0,1,13,0;MQ=50;PV4=0.071,1,0.4,1 PL:DP:SP:GT:GQ 84,24,0:14:0:1/1:96 | |
| 10025 chr10 121199437 . T C 26 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=48 PL:DP:SP:GT:GQ 58,9,0:3:0:1/1:63 | |
| 10026 chr10 121201626 . T C 99 . DP=22;AF1=1;CI95=1,1;DP4=0,0,0,19;MQ=46 PL:DP:SP:GT:GQ 168,57,0:19:0:1/1:99 | |
| 10027 chr10 121207895 . G A,T 12.2 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=49 PL:DP:SP:GT:GQ 58,23,41,14,0,41:4:0:1/1:63 | |
| 10028 chr10 121212582 . C A 9.31 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 10029 chr10 121213896 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10030 chr10 121214404 . C T 3.54 . DP=4;AF1=0.4998;CI95=0.5,0.5;DP4=3,0,1,0;MQ=48;PV4=1,0.37,0,1 PL:DP:SP:GT:GQ 31,0,102:4:0:0/1:34 | |
| 10031 chr10 121234986 . A T 6.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10032 chr10 121247454 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10033 chr10 121254854 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10034 chr10 121271339 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 10035 chr10 121274957 . T G 4.16 . DP=9;AF1=0.5062;CI95=0.5,0.5;DP4=1,0,2,0;MQ=49;PV4=1,0.27,0.33,0.18 PL:DP:SP:GT:GQ 32,0,16:3:0:0/1:19 | |
| 10036 chr10 121287019 . G A 99 . DP=21;AF1=1;CI95=0.5,1;DP4=0,1,0,14;MQ=45;PV4=1,1,0.046,1 PL:DP:SP:GT:GQ 181,15,0:15:0:1/1:75 | |
| 10037 chr10 121335331 . C T 3.54 . DP=5;AF1=0.4998;CI95=0.5,0.5;DP4=0,3,0,1;MQ=48;PV4=1,0.37,0,1 PL:DP:SP:GT:GQ 31,0,105:4:0:0/1:34 | |
| 10038 chr10 121336730 . T C 3.54 . DP=5;AF1=0.4998;CI95=0.5,0.5;DP4=0,3,0,1;MQ=48;PV4=1,0.01,0,0.44 PL:DP:SP:GT:GQ 31,0,114:4:0:0/1:34 | |
| 10039 chr10 121372686 . A ATG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 10040 chr10 121412079 . TC TCAAAGTAC 5.08 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 10041 chr10 121413387 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10042 chr10 121417151 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10043 chr10 121417957 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 10044 chr10 121423749 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10045 chr10 121425462 . C G 3.56 . DP=2;AF1=0.5038;CI95=0.5,0.5;DP4=1,0,1,0;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,18:2:0:0/1:21 | |
| 10046 chr10 121429647 . AGCGGCGGCGGC AGCGGCGGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10047 chr10 121431865 . G T 75 . DP=29;AF1=0.5;CI95=0.5,0.5;DP4=13,4,8,2;MQ=49;PV4=1,1.5e-07,0.004,1 PL:DP:SP:GT:GQ 105,0,255:27:0:0/1:99 | |
| 10048 chr10 121435955 . A C 42 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=46 PL:DP:SP:GT:GQ 74,9,0:3:0:1/1:63 | |
| 10049 chr10 121436139 . C T 22 . DP=28;AF1=0.5;CI95=0.5,0.5;DP4=11,1,0,6;MQ=49;PV4=0.00038,3.4e-05,0.00052,0.086 PL:DP:SP:GT:GQ 52,0,238:18:34:0/1:55 | |
| 10050 chr10 121436362 . A G 99 . DP=37;AF1=1;CI95=1,1;DP4=0,0,17,11;MQ=47 PL:DP:SP:GT:GQ 255,84,0:28:0:1/1:99 | |
| 10051 chr10 121438256 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10052 chr10 121443014 . aaaacaaacaaacaaacaaacaa aaaacaaacaaacaaacaa 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 10053 chr10 121447131 . g gTCAGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10054 chr10 121450725 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10055 chr10 121470866 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 10056 chr10 121520559 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10057 chr10 121533279 . G A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 10058 chr10 121540434 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10059 chr10 121564842 . AA AATTGGGGA 12.7 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10060 chr10 121565015 . C G 33 . DP=9;AF1=0.5003;CI95=0.5,0.5;DP4=0,2,0,3;MQ=47;PV4=1,1,0.045,1 PL:DP:SP:GT:GQ 63,0,29:5:0:0/1:32 | |
| 10061 chr10 121591511 . G A 31 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=4,1,3,0;MQ=48;PV4=1,0.089,0.00057,0.27 PL:DP:SP:GT:GQ 61,0,161:8:0:0/1:64 | |
| 10062 chr10 121596078 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10063 chr10 121612471 . A G 15.1 . DP=17;AF1=0.5005;CI95=0.5,0.5;DP4=2,0,4,0;MQ=48;PV4=1,1,0.032,0.27 PL:DP:SP:GT:GQ 45,0,27:6:0:0/1:30 | |
| 10064 chr10 121617180 . CTG CTGTG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,43:2:0:0/1:43 | |
| 10065 chr10 121631071 . A G 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 10066 chr10 121636690 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10067 chr10 121649521 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10068 chr10 121662598 . TC TCGTTCAC 7.36 . INDEL;DP=2;AF1=0.5012;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,23:2:0:0/1:26 | |
| 10069 chr10 121676211 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10070 chr10 121677717 . TTC TTCGGTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10071 chr10 121729480 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10072 chr10 121736653 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10073 chr10 121759497 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10074 chr10 121764852 . G A 4.14 . DP=2;AF1=0.5014;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,22:2:0:0/1:25 | |
| 10075 chr10 121795891 . T TAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10076 chr10 121799829 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10077 chr10 121800857 . t tA 3.25 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 10078 chr10 121821523 . ATTT AT 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 10079 chr10 121828735 . AGGG AG 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 10080 chr10 121861410 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10081 chr10 121863603 . A T 7.8 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 10082 chr10 121874388 . CCTGG C 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 10083 chr10 121875398 . TG TGTCAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10084 chr10 121895447 . A AGTGCACTTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10085 chr10 121908248 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10086 chr10 121920277 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10087 chr10 121921244 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10088 chr10 121956637 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10089 chr10 121972116 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10090 chr10 121980792 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10091 chr10 121988991 . TAGAG TAGAGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10092 chr10 122006715 . A G 7.8 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 10093 chr10 122027083 . a aTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10094 chr10 122035730 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10095 chr10 122037744 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10096 chr10 122047971 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10097 chr10 122052336 . gg gGTGTg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10098 chr10 122053028 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10099 chr10 122053746 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10100 chr10 122056913 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10101 chr10 122069544 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10102 chr10 122073091 . T TTC 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 10103 chr10 122075294 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10104 chr10 122077464 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10105 chr10 122085050 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10106 chr10 122090422 . G C 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,0;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,42:2:0:0/1:34 | |
| 10107 chr10 122093619 . T C 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 10108 chr10 122103958 . g gGACCCATGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10109 chr10 122135448 . G GCTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10110 chr10 122135892 . CA CATA 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 10111 chr10 122138923 . T TGGAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10112 chr10 122144066 . c cGT 4.42 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 10113 chr10 122155086 . TACTG T 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 10114 chr10 122159796 . G GTTTA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 10115 chr10 122168689 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10116 chr10 122170251 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10117 chr10 122179540 . TGAGGG TG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10118 chr10 122182111 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10119 chr10 122184583 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10120 chr10 122184820 . T TGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10121 chr10 122185248 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10122 chr10 122213868 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 10123 chr10 122254002 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10124 chr10 122260397 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10125 chr10 122265455 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10126 chr10 122274970 . A G 4.77 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10127 chr10 122278402 . T A 3.01 . DP=16;AF1=0.4997;CI95=0.5,0.5;DP4=1,3,0,2;MQ=48;PV4=1,0.4,0.032,1 PL:DP:SP:GT:GQ 30,0,86:6:0:0/1:33 | |
| 10128 chr10 122284444 . T TAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10129 chr10 122287946 . C CAGTG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 10130 chr10 122291121 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10131 chr10 122327883 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 10132 chr10 122341435 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 10133 chr10 122347813 . CT CTGT 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 10134 chr10 122357800 . CA CAA 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 10135 chr10 122361465 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10136 chr10 122368767 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10137 chr10 122380187 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10138 chr10 122380818 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10139 chr10 122381912 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10140 chr10 122384601 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10141 chr10 122390400 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10142 chr10 122399119 . C T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 10143 chr10 122421341 . A T 3.06 . DP=2;AF1=0.5099;CI95=0.5,0.5;DP4=0,1,0,1;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,14:2:0:0/1:17 | |
| 10144 chr10 122423886 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10145 chr10 122447929 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 10146 chr10 122478925 . A T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 10147 chr10 122508325 . T G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 10148 chr10 122548483 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10149 chr10 122548488 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10150 chr10 122549000 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10151 chr10 122551780 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10152 chr10 122556373 . AATTT A 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10153 chr10 122570029 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 10154 chr10 122570543 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10155 chr10 122589631 . G T 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 10156 chr10 122593391 . T TA 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 10157 chr10 122610927 . GC GCAC 3.25 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=1,2,0,1;MQ=50;PV4=1,1,1,0.39 PL:DP:SP:GT:GQ 38,0,108:4:0:0/1:41 | |
| 10158 chr10 122615714 . cc cCGATGGTTTGc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10159 chr10 122625233 . T G 21 . DP=11;AF1=0.5;CI95=0.5,0.5;DP4=1,1,0,4;MQ=49;PV4=0.33,0.18,0.015,0.39 PL:DP:SP:GT:GQ 51,0,46:6:0:0/1:48 | |
| 10160 chr10 122626615 . T G 36 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=3,6,5,0;MQ=48;PV4=0.031,0.0027,4.7e-06,0.012 PL:DP:SP:GT:GQ 66,0,250:14:15:0/1:69 | |
| 10161 chr10 122648671 . T A 17.1 . DP=21;AF1=0.5;CI95=0.5,0.5;DP4=4,2,0,5;MQ=49;PV4=0.061,1,0.43,1 PL:DP:SP:GT:GQ 47,0,61:11:12:0/1:50 | |
| 10162 chr10 122648671 . TGGG TGGAGAAGGG 7.69 . INDEL;DP=21;AF1=0.5554;CI95=0.5,1;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,7:2:0:0/1:10 | |
| 10163 chr10 122663585 . G A 99 . DP=15;AF1=1;CI95=1,1;DP4=0,0,11,2;MQ=47 PL:DP:SP:GT:GQ 178,39,0:13:0:1/1:99 | |
| 10164 chr10 122664967 . C T 20.2 . DP=15;AF1=0.9966;CI95=0.5,1;DP4=0,1,0,9;MQ=49;PV4=1,0.00033,1,1 PL:DP:SP:GT:GQ 49,1,0:10:0:1/1:23 | |
| 10165 chr10 122665489 . C T 10.5 . DP=40;AF1=0.5101;CI95=0.5,0.5;DP4=0,1,1,1;MQ=48;PV4=1,1,0.11,1 PL:DP:SP:GT:GQ 40,0,14:3:0:0/1:17 | |
| 10166 chr10 122665509 . T G 31 . DP=29;AF1=0.5;CI95=0.5,0.5;DP4=10,2,1,7;MQ=49;PV4=0.0045,0.051,0.00012,1 PL:DP:SP:GT:GQ 61,0,192:20:23:0/1:64 | |
| 10167 chr10 122668296 . G A 99 . DP=16;AF1=1;CI95=1,1;DP4=0,0,1,12;MQ=44 PL:DP:SP:GT:GQ 222,39,0:13:0:1/1:99 | |
| 10168 chr10 122668353 . TAAGA TAAGAAAGA 52.2 . INDEL;DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=50 PL:DP:SP:GT:GQ 91,6,0:2:0:1/1:49 | |
| 10169 chr10 122682775 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 10170 chr10 122688921 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10171 chr10 122743358 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 10172 chr10 122782795 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10173 chr10 122801431 . T A 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 10174 chr10 122807199 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10175 chr10 122815229 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10176 chr10 122823430 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 10177 chr10 122860543 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10178 chr10 122868638 . a aACTCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10179 chr10 122893127 . G GCGA 3.25 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=3,0,1,0;MQ=50;PV4=1,1,1,0.16 PL:DP:SP:GT:GQ 38,0,94:4:0:0/1:41 | |
| 10180 chr10 122895427 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10181 chr10 122922714 . T C 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,42:2:0:0/1:33 | |
| 10182 chr10 122934223 . aa aAACCa 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10183 chr10 122940898 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10184 chr10 122943056 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 10185 chr10 122943320 . C CTG 11.8 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 10186 chr10 122961904 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10187 chr10 122973720 . C G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 10188 chr10 122980375 . C G 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10189 chr10 122982149 . G C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 10190 chr10 122988184 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10191 chr10 122996533 . T G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 10192 chr10 123009410 . G T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10193 chr10 123010713 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10194 chr10 123018173 . G C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 10195 chr10 123023641 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10196 chr10 123032522 . T A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 10197 chr10 123033083 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10198 chr10 123034861 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10199 chr10 123046940 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 10200 chr10 123051749 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10201 chr10 123070986 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10202 chr10 123071963 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 10203 chr10 123072804 . TTC TTCGTTCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10204 chr10 123085967 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10205 chr10 123090100 . c cTCA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10206 chr10 123092386 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10207 chr10 123126281 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10208 chr10 123146064 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10209 chr10 123150551 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10210 chr10 123165672 . T G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 10211 chr10 123171671 . CGAG CG 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 10212 chr10 123178734 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 10213 chr10 123188183 . t tAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10214 chr10 123202292 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10215 chr10 123202303 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10216 chr10 123204449 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10217 chr10 123204462 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10218 chr10 123207263 . T TATCTGGTCCCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10219 chr10 123212959 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10220 chr10 123243237 . C T 9.52 . DP=21;AF1=0.5;CI95=0.5,0.5;DP4=4,5,2,3;MQ=50;PV4=1,8.4e-06,1,0.25 PL:DP:SP:GT:GQ 39,0,255:14:0:0/1:42 | |
| 10221 chr10 123244834 . C T 3.54 . DP=5;AF1=0.4998;CI95=0.5,0.5;DP4=3,0,1,0;MQ=48;PV4=1,0,0,0.29 PL:DP:SP:GT:GQ 31,0,114:4:0:0/1:34 | |
| 10222 chr10 123247020 . T C 7.59 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 38,6,0:2:0:1/1:49 | |
| 10223 chr10 123251922 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 10224 chr10 123258109 . T C 34 . DP=28;AF1=0.5;CI95=0.5,0.5;DP4=1,11,0,7;MQ=49;PV4=1,0.0018,0.00015,1 PL:DP:SP:GT:GQ 64,0,241:19:0:0/1:67 | |
| 10225 chr10 123260268 . T C 8.64 . DP=13;AF1=0.5;CI95=0.5,0.5;DP4=8,0,4,0;MQ=50;PV4=1,0.0032,0.003,1 PL:DP:SP:GT:GQ 38,0,187:12:0:0/1:41 | |
| 10226 chr10 123263155 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 10227 chr10 123263490 . T C 4.13 . DP=27;AF1=0.4998;CI95=0.5,0.5;DP4=1,14,0,5;MQ=50;PV4=1,0.00018,0.0018,1 PL:DP:SP:GT:GQ 32,0,255:20:0:0/1:35 | |
| 10228 chr10 123271059 . T G 16.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=46 PL:DP:SP:GT:GQ 48,6,0:2:0:1/1:49 | |
| 10229 chr10 123289882 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10230 chr10 123297240 . A AAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10231 chr10 123310871 . A G 99 . DP=52;AF1=0.5;CI95=0.5,0.5;DP4=16,17,5,11;MQ=49;PV4=0.36,1.8e-14,1.9e-17,1 PL:DP:SP:GT:GQ 137,0,255:49:4:0/1:99 | |
| 10232 chr10 123312753 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10233 chr10 123321037 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10234 chr10 123343055 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 10235 chr10 123350503 . gcacacacacacacacac gcacacacacacacac 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10236 chr10 123351050 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10237 chr10 123360850 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10238 chr10 123364636 . T A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 10239 chr10 123366458 . C G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 10240 chr10 123386393 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10241 chr10 123393509 . G C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10242 chr10 123395166 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10243 chr10 123399522 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10244 chr10 123400741 . CATCAT C 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 10245 chr10 123448996 . T TCTGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10246 chr10 123462068 . A AGTCTAAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10247 chr10 123466276 . A C 4.77 . DP=3;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,36:2:0:0/1:34 | |
| 10248 chr10 123485136 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10249 chr10 123485142 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10250 chr10 123490444 . GC GCCTAGGAGTC 7.35 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 10251 chr10 123491207 . t tG 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 10252 chr10 123503187 . T C 99 . DP=21;AF1=1;CI95=1,1;DP4=1,0,11,7;MQ=48;PV4=1,0.027,0.2,1 PL:DP:SP:GT:GQ 192,24,0:19:0:1/1:96 | |
| 10253 chr10 123505246 . c cGTCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10254 chr10 123524402 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10255 chr10 123532901 . T C 21.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=46 PL:DP:SP:GT:GQ 53,6,0:2:0:1/1:49 | |
| 10256 chr10 123541192 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10257 chr10 123546573 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10258 chr10 123549657 . TCCAGC TCCCCCAGC 4.45 . INDEL;DP=21;AF1=0.5063;CI95=0.5,0.5;DP4=1,1,2,0;MQ=50;PV4=1,1,1,0.22 PL:DP:SP:GT:GQ 40,0,16:4:0:0/1:19 | |
| 10259 chr10 123596254 . T C 99 . DP=24;AF1=1;CI95=1,1;DP4=0,0,16,4;MQ=46 PL:DP:SP:GT:GQ 245,60,0:20:0:1/1:99 | |
| 10260 chr10 123611738 . G GGTCGGT 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=49 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10261 chr10 123665906 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10262 chr10 123671070 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 10263 chr10 123672874 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10264 chr10 123709566 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 10265 chr10 123711890 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10266 chr10 123715503 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10267 chr10 123716503 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 10268 chr10 123719928 . C T 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 10269 chr10 123733365 . TAAAAA TAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10270 chr10 123742250 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10271 chr10 123796353 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10272 chr10 123797277 . CT CTCCTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10273 chr10 123809537 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10274 chr10 123836831 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 10275 chr10 123842523 . G A 99 . DP=24;AF1=1;CI95=1,1;DP4=0,0,2,18;MQ=43 PL:DP:SP:GT:GQ 255,60,0:20:0:1/1:99 | |
| 10276 chr10 123842893 . G A 5.49 . DP=5;AF1=0.5049;CI95=0.5,0.5;DP4=0,1,1,1;MQ=49;PV4=1,0.3,0.33,1 PL:DP:SP:GT:GQ 34,0,17:3:0:0/1:20 | |
| 10277 chr10 123844092 . TTGC T 6.55 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 43,0,44:2:0:0/1:43 | |
| 10278 chr10 123844503 . C T 48.1 . DP=18;AF1=1;CI95=0.5,1;DP4=0,0,1,5;MQ=49 PL:DP:SP:GT:GQ 81,18,0:6:0:1/1:90 | |
| 10279 chr10 123845211 . G A 99 . DP=20;AF1=1;CI95=1,1;DP4=0,0,2,10;MQ=45 PL:DP:SP:GT:GQ 203,36,0:12:0:1/1:99 | |
| 10280 chr10 123845322 . T C 23.1 . DP=15;AF1=0.5129;CI95=0.5,0.5;DP4=0,1,2,1;MQ=48;PV4=1,0.34,0.3,1 PL:DP:SP:GT:GQ 53,0,13:4:0:0/1:16 | |
| 10281 chr10 123845897 . G C,T 99 . DP=9;AF1=1;CI95=0.5,1;DP4=0,0,4,3;MQ=46 PL:DP:SP:GT:GQ 133,18,131,0,7,131:7:0:1/1:90 | |
| 10282 chr10 123846485 . A G 61 . DP=30;AF1=0.5013;CI95=0.5,0.5;DP4=1,2,3,8;MQ=49;PV4=1,0.038,0.48,1 PL:DP:SP:GT:GQ 91,0,23:14:0:0/1:26 | |
| 10283 chr10 123846860 . C T 65.8 . DP=34;AF1=1;CI95=0.5,1;DP4=0,1,4,2;MQ=47;PV4=0.43,1,0.27,1 PL:DP:SP:GT:GQ 97,6,0:7:0:1/1:49 | |
| 10284 chr10 123862842 . T A 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 10285 chr10 123870571 . T G 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10286 chr10 123875149 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10287 chr10 123883845 . G A 6.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10288 chr10 123895063 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10289 chr10 123901856 . AT ATATGAGT 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 10290 chr10 123913619 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10291 chr10 123925021 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 10292 chr10 123925141 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10293 chr10 123927346 . C T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 10294 chr10 123954738 . G T 31 . DP=8;AF1=0.5;CI95=0.5,0.5;DP4=0,5,1,2;MQ=49;PV4=0.37,0.0068,0.0058,1 PL:DP:SP:GT:GQ 61,0,152:8:0:0/1:64 | |
| 10295 chr10 123958805 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10296 chr10 123970173 . T C 32.8 . DP=39;AF1=0.6243;CI95=0.5,1;DP4=1,0,0,5;MQ=49;PV4=0.17,0.47,0.22,1 PL:DP:SP:GT:GQ 62,0,4:6:0:0/1:6 | |
| 10297 chr10 123970513 . G A 99 . DP=11;AF1=1;CI95=1,1;DP4=0,0,1,9;MQ=47 PL:DP:SP:GT:GQ 139,30,0:10:0:1/1:99 | |
| 10298 chr10 123970530 . T C 83.1 . DP=9;AF1=1;CI95=0.5,1;DP4=0,0,4,2;MQ=47 PL:DP:SP:GT:GQ 116,18,0:6:0:1/1:90 | |
| 10299 chr10 123975269 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10300 chr10 123976391 . C A 26 . DP=21;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=48 PL:DP:SP:GT:GQ 58,9,0:3:0:1/1:63 | |
| 10301 chr10 123979600 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 10302 chr10 124026237 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10303 chr10 124027882 . A ATCT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 10304 chr10 124034528 . G T 28 . DP=14;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=47 PL:DP:SP:GT:GQ 60,9,0:3:0:1/1:63 | |
| 10305 chr10 124034703 . T C 11.3 . DP=19;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=49 PL:DP:SP:GT:GQ 43,9,0:3:0:1/1:63 | |
| 10306 chr10 124036226 . T C 3.41 . DP=18;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 32,6,0:2:0:1/1:49 | |
| 10307 chr10 124036494 . T C 8.87 . DP=6;AF1=0.5336;CI95=0.5,1;DP4=0,1,0,3;MQ=47;PV4=1,0.42,1,0.093 PL:DP:SP:GT:GQ 38,0,9:4:0:0/1:12 | |
| 10308 chr10 124041007 . t tTTGCGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10309 chr10 124046275 . C A 4.77 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10310 chr10 124054039 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 10311 chr10 124055376 . GA GAAGAGAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10312 chr10 124070164 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10313 chr10 124086521 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10314 chr10 124087674 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10315 chr10 124089036 . G A 45.3 . DP=22;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=49 PL:DP:SP:GT:GQ 78,15,0:5:0:1/1:75 | |
| 10316 chr10 124098437 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10317 chr10 124102084 . A C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 10318 chr10 124105838 . GA GAACA 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 10319 chr10 124109996 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10320 chr10 124121629 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10321 chr10 124147259 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10322 chr10 124148870 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10323 chr10 124152936 . GA GAA 31.2 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=50 PL:DP:SP:GT:GQ 70,6,0:2:0:1/1:49 | |
| 10324 chr10 124168745 . gt gTGCTt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10325 chr10 124175340 . CAAGAA CAA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10326 chr10 124183602 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 10327 chr10 124183732 . T C 59.1 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,6,0;MQ=48 PL:DP:SP:GT:GQ 92,18,0:6:0:1/1:90 | |
| 10328 chr10 124189197 . A G 99 . DP=39;AF1=1;CI95=1,1;DP4=1,1,16,9;MQ=47;PV4=1,0.22,0.15,1 PL:DP:SP:GT:GQ 224,24,0:27:0:1/1:96 | |
| 10329 chr10 124192812 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10330 chr10 124201606 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10331 chr10 124223003 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10332 chr10 124226879 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10333 chr10 124227002 . AG AGAGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10334 chr10 124248720 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10335 chr10 124256123 . aa aAAGa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10336 chr10 124271589 . G A 64 . DP=27;AF1=1;CI95=1,1;DP4=0,0,0,8;MQ=43 PL:DP:SP:GT:GQ 97,24,0:8:0:1/1:96 | |
| 10337 chr10 124271595 . G A 99 . DP=25;AF1=1;CI95=1,1;DP4=0,1,0,19;MQ=43;PV4=1,1,0.023,1 PL:DP:SP:GT:GQ 215,42,0:20:0:1/1:99 | |
| 10338 chr10 124283853 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10339 chr10 124288257 . G GGATCTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10340 chr10 124289223 . G A 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 10341 chr10 124293516 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10342 chr10 124312876 . G A 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 10343 chr10 124313105 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 10344 chr10 124317702 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10345 chr10 124325544 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 10346 chr10 124328060 . T TA 3.81 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 10347 chr10 124401815 . T A 6.98 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,44:2:0:0/1:38 | |
| 10348 chr10 124402677 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 10349 chr10 124409684 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 10350 chr10 124411834 . G C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 10351 chr10 124419042 . gt gTTCGAGCt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10352 chr10 124419315 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10353 chr10 124421376 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 10354 chr10 124424808 . GTCTCTCTCTC GTCTCTCTCTCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10355 chr10 124426843 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10356 chr10 124428266 . aa aACa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10357 chr10 124457452 . C T 99 . DP=50;AF1=1;CI95=1,1;DP4=0,0,21,22;MQ=50 PL:DP:SP:GT:GQ 198,129,0:43:0:1/1:99 | |
| 10358 chr10 124525070 . AATGGTG A 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10359 chr10 124534167 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10360 chr10 124548840 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10361 chr10 124550469 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10362 chr10 124551898 . G A 13 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47 PL:DP:SP:GT:GQ 44,6,0:2:0:1/1:49 | |
| 10363 chr10 124563873 . G GTACCTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10364 chr10 124566643 . a aCAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10365 chr10 124582761 . T G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 10366 chr10 124595870 . TCAG T 3.25 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=1,2,0,1;MQ=50;PV4=1,0.43,1,1 PL:DP:SP:GT:GQ 38,0,113:4:0:0/1:41 | |
| 10367 chr10 124596984 . A G 7.8 . DP=10;AF1=0.5;CI95=0.5,0.5;DP4=1,1,0,2;MQ=47;PV4=1,0.35,0.033,1 PL:DP:SP:GT:GQ 37,0,51:4:0:0/1:40 | |
| 10368 chr10 124601679 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10369 chr10 124608914 . T C 3.54 . DP=11;AF1=0.4998;CI95=0.5,0.5;DP4=0,3,0,2;MQ=49;PV4=1,0.059,0.17,0.33 PL:DP:SP:GT:GQ 31,0,95:5:0:0/1:34 | |
| 10370 chr10 124623193 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 10371 chr10 124632570 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10372 chr10 124636918 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 10373 chr10 124640434 . C T 9.52 . DP=7;AF1=0.5004;CI95=0.5,0.5;DP4=1,0,0,4;MQ=50;PV4=0.2,0.0036,1,1 PL:DP:SP:GT:GQ 39,0,28:5:0:0/1:31 | |
| 10374 chr10 124660553 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10375 chr10 124691924 . C T 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10376 chr10 124692017 . G A 16.1 . DP=21;AF1=0.5;CI95=0.5,0.5;DP4=1,6,4,0;MQ=49;PV4=0.015,0.075,0.00032,1 PL:DP:SP:GT:GQ 46,0,163:11:18:0/1:49 | |
| 10377 chr10 124692027 . C A 19.1 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=1,5,4,1;MQ=48;PV4=0.08,0.016,0.0096,1 PL:DP:SP:GT:GQ 49,0,149:11:11:0/1:52 | |
| 10378 chr10 124698712 . A T 5.51 . DP=2;AF1=0.5079;CI95=0.5,0.5;DP4=1,0,1,0;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,15:2:0:0/1:18 | |
| 10379 chr10 124706259 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 10380 chr10 124736337 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10381 chr10 124742224 . A G 3.01 . DP=15;AF1=0.4997;CI95=0.5,0.5;DP4=5,0,1,1;MQ=48;PV4=0.29,1,0.075,0.23 PL:DP:SP:GT:GQ 30,0,75:7:0:0/1:33 | |
| 10382 chr10 124742792 . G A 99 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=6,1,5,1;MQ=47;PV4=1,0.0099,0,0.24 PL:DP:SP:GT:GQ 158,0,211:13:0:0/1:99 | |
| 10383 chr10 124759737 . c cATTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10384 chr10 124768704 . CC CCGCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10385 chr10 124807045 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10386 chr10 124810385 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10387 chr10 124810578 . A C 6.79 . DP=11;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 37,6,0:2:0:1/1:49 | |
| 10388 chr10 124810595 . ACCC ACATTGTGCCC 5.08 . INDEL;DP=14;AF1=0.5;CI95=0.5,0.5;DP4=2,0,0,1;MQ=50;PV4=0.33,1,1,1 PL:DP:SP:GT:GQ 41,0,39:3:0:0/1:40 | |
| 10389 chr10 124810759 . GAT GATCAT 3.25 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 10390 chr10 124815300 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10391 chr10 124820702 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10392 chr10 124833914 . GT GTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10393 chr10 124844020 . G C 3.55 . DP=2;AF1=0.5014;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,22:2:0:0/1:24 | |
| 10394 chr10 124872474 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10395 chr10 124891797 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10396 chr10 124892845 . G T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10397 chr10 124896872 . C G 4.77 . DP=3;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,1;MQ=48;PV4=1,0,0,1 PL:DP:SP:GT:GQ 33,0,41:3:0:0/1:35 | |
| 10398 chr10 124901284 . T G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 10399 chr10 124910981 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 10400 chr10 124911588 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10401 chr10 124913625 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10402 chr10 124929220 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10403 chr10 124930485 . T C 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,35:2:0:0/1:32 | |
| 10404 chr10 124933024 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10405 chr10 124936679 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10406 chr10 124957188 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10407 chr10 124972994 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10408 chr10 124997048 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 10409 chr10 125054028 . AAC A 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 10410 chr10 125055655 . G C 5.46 . DP=2;AF1=0.5002;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,30:2:0:0/1:32 | |
| 10411 chr10 125069693 . AT ATGAAGTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10412 chr10 125091934 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 10413 chr10 125108057 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10414 chr10 125144428 . C A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 10415 chr10 125169685 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10416 chr10 125178391 . T C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 10417 chr10 125181875 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=47 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10418 chr10 125193675 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 10419 chr10 125194890 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10420 chr10 125198846 . G A 5.46 . DP=3;AF1=0.4999;CI95=0.5,0.5;DP4=2,0,1,0;MQ=41;PV4=1,1,1,0.17 PL:DP:SP:GT:GQ 34,0,58:3:0:0/1:37 | |
| 10421 chr10 125200200 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10422 chr10 125201759 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10423 chr10 125203726 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10424 chr10 125205712 . TCA T 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 10425 chr10 125210830 . GGAAA G 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10426 chr10 125222814 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10427 chr10 125232551 . TG TGGGCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10428 chr10 125236324 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10429 chr10 125245858 . CTATA CTA 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 10430 chr10 125251804 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10431 chr10 125264416 . GG GGTCTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10432 chr10 125286860 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10433 chr10 125293108 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10434 chr10 125301169 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 10435 chr10 125310166 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10436 chr10 125319204 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10437 chr10 125323582 . ctt cTTGTtt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10438 chr10 125331953 . G A 3.57 . DP=3;AF1=0.5048;CI95=0.5,0.5;DP4=1,0,0,2;MQ=49;PV4=0.33,0.061,0,0.4 PL:DP:SP:GT:GQ 31,0,17:3:0:0/1:20 | |
| 10439 chr10 125341760 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10440 chr10 125354213 . c cTGGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10441 chr10 125355548 . CC CCACTAGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10442 chr10 125356519 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10443 chr10 125375412 . CAT CATAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10444 chr10 125376555 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10445 chr10 125384920 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10446 chr10 125398030 . G GGGACAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10447 chr10 125402050 . T A 8.65 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 10448 chr10 125409045 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10449 chr10 125419538 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10450 chr10 125424736 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10451 chr10 125424750 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10452 chr10 125444464 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10453 chr10 125449288 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10454 chr10 125449320 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10455 chr10 125452695 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10456 chr10 125453912 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10457 chr10 125463208 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10458 chr10 125468333 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10459 chr10 125468721 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10460 chr10 125487564 . ggc gGCAGAgc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10461 chr10 125492105 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 10462 chr10 125492188 . acacccatcac aCACCCATcacccatcac 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10463 chr10 125492465 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10464 chr10 125506302 . T C 22.2 . DP=21;AF1=0.5163;CI95=0.5,1;DP4=0,1,0,4;MQ=48;PV4=1,0.26,0.25,1 PL:DP:SP:GT:GQ 52,0,12:5:0:0/1:15 | |
| 10465 chr10 125506400 . T C 51.5 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,1,3;MQ=48 PL:DP:SP:GT:GQ 84,12,0:4:0:1/1:72 | |
| 10466 chr10 125521626 . G A 52 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=6,2,5,2;MQ=49;PV4=1,2.9e-05,0.0035,1 PL:DP:SP:GT:GQ 82,0,227:15:0:0/1:85 | |
| 10467 chr10 125521721 . G A 11.3 . DP=9;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=50 PL:DP:SP:GT:GQ 43,9,0:3:0:1/1:63 | |
| 10468 chr10 125521751 . C G 28.5 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=49 PL:DP:SP:GT:GQ 61,12,0:4:0:1/1:72 | |
| 10469 chr10 125528219 . G A 5.46 . DP=13;AF1=0.4999;CI95=0.5,0.5;DP4=1,7,3,0;MQ=49;PV4=0.024,0.00018,2.4e-05,0.035 PL:DP:SP:GT:GQ 34,0,228:11:16:0/1:37 | |
| 10470 chr10 125530641 . G A 13.2 . DP=4;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10471 chr10 125538412 . A G 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10472 chr10 125540380 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10473 chr10 125546329 . T A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 10474 chr10 125594070 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10475 chr10 125602942 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10476 chr10 125622127 . T C 4.13 . DP=9;AF1=0.4998;CI95=0.5,0.5;DP4=5,1,2,0;MQ=48;PV4=1,0.42,0.17,1 PL:DP:SP:GT:GQ 32,0,130:8:0:0/1:35 | |
| 10477 chr10 125622250 . CAAA CAA 89.8 . INDEL;DP=18;AF1=1;CI95=0.5,1;DP4=0,1,0,13;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 130,14,0:14:0:1/1:70 | |
| 10478 chr10 125624682 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10479 chr10 125625775 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10480 chr10 125627731 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10481 chr10 125646780 . gt gTt 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 10482 chr10 125661729 . GA GATCTA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 10483 chr10 125667840 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 10484 chr10 125669317 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10485 chr10 125677206 . AT ATCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10486 chr10 125683842 . C T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 10487 chr10 125687559 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10488 chr10 125689719 . C CAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10489 chr10 125691653 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 10490 chr10 125696356 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10491 chr10 125703968 . G T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 10492 chr10 125728742 . G A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 10493 chr10 125735601 . t tGTAGGGCA 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=49 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 10494 chr10 125736106 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10495 chr10 125737764 . C T 5.46 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,44:2:0:0/1:37 | |
| 10496 chr10 125761144 . AAG AAGAG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,43:2:0:0/1:43 | |
| 10497 chr10 125766748 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10498 chr10 125774926 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 10499 chr10 125779320 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 10500 chr10 125779581 . tc tCGGc 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 10501 chr10 125780954 . T G 12.3 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=0,7,0,4;MQ=49;PV4=1,0.39,0.088,0.02 PL:DP:SP:GT:GQ 42,0,81:11:0:0/1:45 | |
| 10502 chr10 125793007 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10503 chr10 125798111 . T C 99 . DP=43;AF1=0.5;CI95=0.5,0.5;DP4=6,11,7,12;MQ=48;PV4=1,1.2e-06,0.41,1 PL:DP:SP:GT:GQ 152,0,255:36:0:0/1:99 | |
| 10504 chr10 125798243 . T A 4.77 . DP=18;AF1=0.4999;CI95=0.5,0.5;DP4=0,6,0,3;MQ=49;PV4=1,0.48,0.0078,0.27 PL:DP:SP:GT:GQ 33,0,99:9:0:0/1:36 | |
| 10505 chr10 125801761 . A T 99 . DP=34;AF1=0.5;CI95=0.5,0.5;DP4=17,1,10,0;MQ=48;PV4=1,0.043,3.1e-09,1 PL:DP:SP:GT:GQ 138,0,255:28:0:0/1:99 | |
| 10506 chr10 125826567 . C G 5.29 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47 PL:DP:SP:GT:GQ 35,6,0:2:0:1/1:49 | |
| 10507 chr10 125843828 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10508 chr10 125844013 . GCCC GCCCC 21.3 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=50 PL:DP:SP:GT:GQ 60,6,0:2:0:1/1:49 | |
| 10509 chr10 125849536 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 10510 chr10 125858310 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10511 chr10 125865518 . caggaagga cagga 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 10512 chr10 125919495 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 10513 chr10 125919570 . C T 7.8 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 10514 chr10 125921469 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10515 chr10 125924316 . T TTA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 10516 chr10 125932564 . GGA GGAGCCAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10517 chr10 125936650 . TGAGAGAGAGAG TGAGAGAGAG 7.35 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 10518 chr10 125946702 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10519 chr10 125951960 . GA GAAA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,43:2:0:0/1:43 | |
| 10520 chr10 125953339 . c cGGTTGTGA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10521 chr10 125970176 . a aTAGGTGCTTCCAAT 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 10522 chr10 125978715 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10523 chr10 125997171 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 10524 chr10 126017970 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10525 chr10 126020486 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10526 chr10 126031474 . A G 17.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 49,6,0:2:0:1/1:49 | |
| 10527 chr10 126058256 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 10528 chr10 126062110 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10529 chr10 126069388 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 10530 chr10 126074160 . C A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 10531 chr10 126080896 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10532 chr10 126086730 . G A 99 . DP=16;AF1=1;CI95=1,1;DP4=0,0,0,13;MQ=47 PL:DP:SP:GT:GQ 146,39,0:13:0:1/1:99 | |
| 10533 chr10 126088635 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10534 chr10 126089389 . T A 4.8 . DP=8;AF1=0.5049;CI95=0.5,0.5;DP4=1,0,2,0;MQ=49;PV4=1,0.33,0.33,1 PL:DP:SP:GT:GQ 33,0,17:3:0:0/1:20 | |
| 10535 chr10 126090035 . T C 5.76 . DP=2;AF1=0.5553;CI95=0.5,1;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,7:2:0:0/1:10 | |
| 10536 chr10 126090795 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10537 chr10 126093991 . T C 99 . DP=31;AF1=1;CI95=1,1;DP4=1,0,21,3;MQ=46;PV4=1,1,0.025,1 PL:DP:SP:GT:GQ 230,57,0:25:0:1/1:99 | |
| 10538 chr10 126097969 . cagaaaaa ca 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 10539 chr10 126099939 . ca cATCGATa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10540 chr10 126119814 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10541 chr10 126138229 . GCT G 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 10542 chr10 126139255 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10543 chr10 126143669 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10544 chr10 126150912 . t tGATCATCGGCG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 10545 chr10 126173239 . cagagagagagagagagagagagagaga cagagagagagagagagagagagaga 3.81 . INDEL;DP=4;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 10546 chr10 126185451 . T C 14.2 . DP=10;AF1=0.5;CI95=0.5,0.5;DP4=6,0,3,0;MQ=49;PV4=1,0.0029,0.014,0.45 PL:DP:SP:GT:GQ 44,0,169:9:0:0/1:47 | |
| 10547 chr10 126185618 . A G 4.77 . DP=23;AF1=0.4999;CI95=0.5,0.5;DP4=0,14,0,4;MQ=49;PV4=1,0.00012,1.1e-05,1 PL:DP:SP:GT:GQ 33,0,229:18:0:0/1:36 | |
| 10548 chr10 126186771 . A G 40 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=0,9,0,6;MQ=49;PV4=1,1.2e-11,5.5e-06,1 PL:DP:SP:GT:GQ 70,0,208:15:0:0/1:73 | |
| 10549 chr10 126190755 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 10550 chr10 126193665 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10551 chr10 126205626 . A AGAGCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10552 chr10 126231070 . G A 21.8 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=45 PL:DP:SP:GT:GQ 53,6,0:2:0:1/1:49 | |
| 10553 chr10 126232097 . TC TCCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10554 chr10 126241886 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 10555 chr10 126294096 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10556 chr10 126315366 . A ACTGCGCGAG 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=1,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,91:3:0:0/1:44 | |
| 10557 chr10 126322114 . gc gCAAGCc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10558 chr10 126331892 . T TGCAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10559 chr10 126332390 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 10560 chr10 126338763 . G A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 10561 chr10 126344363 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10562 chr10 126352960 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10563 chr10 126361658 . C A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10564 chr10 126365537 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10565 chr10 126368874 . T TGA 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 10566 chr10 126370241 . T G 3.01 . DP=13;AF1=0.4997;CI95=0.5,0.5;DP4=2,0,0,3;MQ=47;PV4=0.1,0.0046,0.0036,0.39 PL:DP:SP:GT:GQ 30,0,74:5:10:0/1:33 | |
| 10567 chr10 126374340 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10568 chr10 126376513 . T TTA 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 10569 chr10 126395688 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 10570 chr10 126400075 . T A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 10571 chr10 126400696 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 10572 chr10 126404521 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10573 chr10 126412100 . C G 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10574 chr10 126424341 . tatgg t 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10575 chr10 126425264 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10576 chr10 126433326 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10577 chr10 126440658 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 10578 chr10 126452139 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10579 chr10 126483864 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10580 chr10 126486991 . TTC TTCTGAGAGTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10581 chr10 126519715 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 10582 chr10 126535580 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10583 chr10 126556590 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 10584 chr10 126598574 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10585 chr10 126601223 . TG TGCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10586 chr10 126631348 . T G 4.77 . DP=35;AF1=0.4999;CI95=0.5,0.5;DP4=13,0,0,4;MQ=49;PV4=0.00042,0.023,0.0034,1 PL:DP:SP:GT:GQ 33,0,205:17:34:0/1:36 | |
| 10587 chr10 126638058 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10588 chr10 126654509 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10589 chr10 126664565 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10590 chr10 126676090 . G A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 10591 chr10 126678147 . C T 9.52 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=5,6,3,4;MQ=21;PV4=1,1.5e-09,0.12,1 PL:DP:SP:GT:GQ 39,0,132:18:0:0/1:42 | |
| 10592 chr10 126682152 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10593 chr10 126691576 . A C 4.77 . DP=2;AF1=0.5009;CI95=0.5,0.5;DP4=0,1,1,0;MQ=37;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,24:2:0:0/1:26 | |
| 10594 chr10 126695673 . G A 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 10595 chr10 126700966 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10596 chr10 126702981 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10597 chr10 126714710 . T G 10.2 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 41,6,0:2:0:1/1:49 | |
| 10598 chr10 126719576 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 10599 chr10 126723655 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10600 chr10 126738533 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 10601 chr10 126738634 . CTCATCAT CTCAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10602 chr10 126747809 . G T 16.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=42 PL:DP:SP:GT:GQ 48,6,0:2:0:1/1:49 | |
| 10603 chr10 126747821 . C T 15.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=42 PL:DP:SP:GT:GQ 47,6,0:2:0:1/1:49 | |
| 10604 chr10 126748671 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10605 chr10 126753158 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10606 chr10 126753255 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10607 chr10 126779952 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10608 chr10 126784866 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 10609 chr10 126791708 . CAT CATAGAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10610 chr10 126796373 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10611 chr10 126800383 . C CCAAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10612 chr10 126811200 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10613 chr10 126815701 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 10614 chr10 126824123 . C CT 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 10615 chr10 126865793 . ga gACCTCa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10616 chr10 126897822 . AGGG AG 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 10617 chr10 126898740 . A AAC 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 10618 chr10 126900707 . A ATTGTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10619 chr10 126902956 . ccg cCGcg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10620 chr10 126906045 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10621 chr10 126914502 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 10622 chr10 126925319 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 10623 chr10 126935058 . C T 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 10624 chr10 126953986 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10625 chr10 126970497 . C G 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 10626 chr10 126998343 . ct cTCGt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10627 chr10 127013973 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 10628 chr10 127043130 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10629 chr10 127082330 . C CTTGAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10630 chr10 127082910 . T G 3.57 . DP=2;AF1=0.5062;CI95=0.5,0.5;DP4=1,0,0,1;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,16:2:0:0/1:19 | |
| 10631 chr10 127092493 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 10632 chr10 127112555 . C G 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 10633 chr10 127118400 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10634 chr10 127149246 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10635 chr10 127160674 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10636 chr10 127165306 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 10637 chr10 127201917 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10638 chr10 127235484 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10639 chr10 127247624 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10640 chr10 127268668 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10641 chr10 127276459 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 10642 chr10 127280715 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10643 chr10 127283384 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 10644 chr10 127284331 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 10645 chr10 127287801 . A AGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10646 chr10 127292511 . G A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 10647 chr10 127295894 . A G 26.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 58,6,0:2:0:1/1:49 | |
| 10648 chr10 127334056 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10649 chr10 127356158 . CCAT CCATCAT 3.25 . INDEL;DP=9;AF1=0.5;CI95=0.5,0.5;DP4=2,1,0,1;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,99:4:0:0/1:41 | |
| 10650 chr10 127366894 . A C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 10651 chr10 127378430 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10652 chr10 127411526 . A G 6.79 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 37,6,0:2:0:1/1:49 | |
| 10653 chr10 127413301 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 10654 chr10 127426588 . C A 99 . DP=26;AF1=0.5;CI95=0.5,0.5;DP4=0,13,0,12;MQ=47;PV4=1,0.00077,2.2e-07,1 PL:DP:SP:GT:GQ 165,0,218:25:0:0/1:99 | |
| 10655 chr10 127426835 . G T 40 . DP=13;AF1=1;CI95=1,1;DP4=0,0,11,0;MQ=50 PL:DP:SP:GT:GQ 73,33,0:11:0:1/1:99 | |
| 10656 chr10 127427678 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10657 chr10 127441346 . C T 62 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=8,0,6,0;MQ=48;PV4=1,0.0067,0.0016,1 PL:DP:SP:GT:GQ 92,0,182:14:0:0/1:95 | |
| 10658 chr10 127447340 . g gGCTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10659 chr10 127447850 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10660 chr10 127456150 . G A 60 . DP=36;AF1=0.5;CI95=0.5,0.5;DP4=13,9,10,3;MQ=49;PV4=0.46,1.4e-10,0.16,1 PL:DP:SP:GT:GQ 90,0,255:35:3:0/1:93 | |
| 10661 chr10 127456294 . G A 33 . DP=31;AF1=0.5;CI95=0.5,0.5;DP4=1,20,0,7;MQ=48;PV4=1,6.4e-06,1.2e-06,1 PL:DP:SP:GT:GQ 63,0,255:28:0:0/1:66 | |
| 10662 chr10 127460753 . G A 99 . DP=44;AF1=0.5;CI95=0.5,0.5;DP4=18,3,17,4;MQ=49;PV4=1,5.5e-13,0.0013,1 PL:DP:SP:GT:GQ 163,0,255:42:0:0/1:99 | |
| 10663 chr10 127462486 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10664 chr10 127471303 . TGAG TGAGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10665 chr10 127476401 . C G 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,1;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 10666 chr10 127477524 . AA AAATCCCA 5.08 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=1,1,1,0;MQ=50;PV4=1,1,1,0.077 PL:DP:SP:GT:GQ 41,0,91:3:0:0/1:44 | |
| 10667 chr10 127484234 . A G 13.2 . DP=3;AF1=0.5003;CI95=0.5,0.5;DP4=0,1,1,1;MQ=48;PV4=1,0.046,0.077,1 PL:DP:SP:GT:GQ 43,0,29:3:0:0/1:32 | |
| 10668 chr10 127484617 . C G 52 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=2,0,6,0;MQ=48;PV4=1,0.0013,0.21,1 PL:DP:SP:GT:GQ 82,0,69:8:0:0/1:72 | |
| 10669 chr10 127484653 . G A 66 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=7,1,7,1;MQ=49;PV4=1,0.00022,0.037,0.29 PL:DP:SP:GT:GQ 96,0,210:16:0:0/1:99 | |
| 10670 chr10 127486044 . a aTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10671 chr10 127486391 . A T 4.21 . DP=2;AF1=0.5161;CI95=0.5,0.5;DP4=1,0,0,1;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,12:2:0:0/1:15 | |
| 10672 chr10 127489363 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10673 chr10 127490689 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10674 chr10 127495943 . A C 10.2 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 41,6,0:2:0:1/1:49 | |
| 10675 chr10 127501695 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10676 chr10 127522572 . T G 7.8 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=0,11,0,4;MQ=49;PV4=1,0.0094,0.00034,1 PL:DP:SP:GT:GQ 37,0,199:15:0:0/1:40 | |
| 10677 chr10 127524612 . C T 16.1 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=6,0,4,0;MQ=49;PV4=1,2.2e-05,0.016,0.014 PL:DP:SP:GT:GQ 46,0,171:10:0:0/1:49 | |
| 10678 chr10 127530287 . G T 3.01 . DP=6;AF1=0.4997;CI95=0.5,0.5;DP4=1,1,2,0;MQ=48;PV4=1,0.09,1,1 PL:DP:SP:GT:GQ 30,0,69:4:0:0/1:33 | |
| 10679 chr10 127541922 . T G 41.2 . DP=10;AF1=0.5263;CI95=0.5,1;DP4=0,1,0,5;MQ=46;PV4=1,0.24,1,1 PL:DP:SP:GT:GQ 71,0,10:6:0:0/1:13 | |
| 10680 chr10 127548587 . C G 28 . DP=11;AF1=0.5;CI95=0.5,0.5;DP4=0,6,0,4;MQ=49;PV4=1,0.01,0.0077,0.44 PL:DP:SP:GT:GQ 58,0,157:10:0:0/1:61 | |
| 10681 chr10 127562030 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10682 chr10 127562117 . T TGGCAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10683 chr10 127571180 . G T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 10684 chr10 127582115 . G C 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 10685 chr10 127598877 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10686 chr10 127629860 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10687 chr10 127655115 . GG GGCTG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 10688 chr10 127661380 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10689 chr10 127662390 . GGtg GGTGtg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10690 chr10 127677374 . A G 19 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=49 PL:DP:SP:GT:GQ 51,9,0:3:0:1/1:63 | |
| 10691 chr10 127679969 . T A 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,43:2:0:0/1:33 | |
| 10692 chr10 127685091 . T C 15.9 . DP=37;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=46 PL:DP:SP:GT:GQ 47,6,0:2:0:1/1:49 | |
| 10693 chr10 127697165 . T G 67 . DP=24;AF1=1;CI95=1,1;DP4=0,0,0,8;MQ=48 PL:DP:SP:GT:GQ 100,24,0:8:0:1/1:96 | |
| 10694 chr10 127705831 . A C 3.01 . DP=7;AF1=0.4997;CI95=0.5,0.5;DP4=1,1,2,0;MQ=49;PV4=1,0.17,0.048,1 PL:DP:SP:GT:GQ 30,0,64:4:0:0/1:33 | |
| 10695 chr10 127708468 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10696 chr10 127710314 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 10697 chr10 127726633 . T A 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,1;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,35:2:0:0/1:32 | |
| 10698 chr10 127730596 . C T 71 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=43 PL:DP:SP:GT:GQ 103,9,0:3:0:1/1:63 | |
| 10699 chr10 127738150 . G A 8.64 . DP=10;AF1=0.5;CI95=0.5,0.5;DP4=3,0,3,0;MQ=45;PV4=1,0.065,0.095,1 PL:DP:SP:GT:GQ 38,0,82:6:0:0/1:41 | |
| 10700 chr10 127741430 . ATCTCT ATCTCTGTCTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10701 chr10 127742987 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10702 chr10 127758101 . cct c 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 10703 chr10 127759595 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10704 chr10 127760002 . GGATA G,GAGATA,GA 8.19 . INDEL;DP=14;AF1=0.9999;CI95=0.5,1;DP4=0,0,3,0;MQ=50 PL:DP:SP:GT:GQ 70,28,45,56,25,0,11,42,28,53:3:0:1/1:41 | |
| 10705 chr10 127760005 . T G 4.13 . DP=9;AF1=0.4998;CI95=0.5,0.5;DP4=4,0,2,0;MQ=47;PV4=1,1,0.015,1 PL:DP:SP:GT:GQ 32,0,56:6:0:0/1:35 | |
| 10706 chr10 127767656 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10707 chr10 127807431 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10708 chr10 127809106 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10709 chr10 127814773 . TG TGCGTCTAG 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=49 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 10710 chr10 127829675 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10711 chr10 127832226 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10712 chr10 127833670 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10713 chr10 127843740 . G T 12 . DP=10;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 43,6,0:2:0:1/1:49 | |
| 10714 chr10 127844522 . GCTA GCTAACTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10715 chr10 127851600 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10716 chr10 127876939 . GT GTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10717 chr10 127879933 . G A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 10718 chr10 127889158 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10719 chr10 127913028 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10720 chr10 127915004 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10721 chr10 127921367 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 10722 chr10 127929770 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10723 chr10 127929774 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10724 chr10 127934534 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10725 chr10 127945638 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10726 chr10 127955433 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10727 chr10 127959872 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10728 chr10 127961935 . C T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 10729 chr10 127966627 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 10730 chr10 127980259 . C A 3.55 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10731 chr10 127984465 . G T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10732 chr10 127991940 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10733 chr10 128003417 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10734 chr10 128007123 . a aAAG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10735 chr10 128007145 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10736 chr10 128008523 . T A 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 10737 chr10 128013203 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 10738 chr10 128018109 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10739 chr10 128037109 . T G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 10740 chr10 128043058 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10741 chr10 128083312 . T TTGCAGTTTG 6.56 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=47 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10742 chr10 128086924 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10743 chr10 128093836 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10744 chr10 128096487 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10745 chr10 128102438 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10746 chr10 128122078 . GCA GCACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10747 chr10 128135553 . tgc tGCTATCgc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10748 chr10 128149830 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10749 chr10 128153224 . G C 47.1 . DP=9;AF1=1;CI95=1,1;DP4=0,0,7,0;MQ=50 PL:DP:SP:GT:GQ 80,21,0:7:0:1/1:84 | |
| 10750 chr10 128183638 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10751 chr10 128185811 . G GACACAGAAA 12.7 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10752 chr10 128186024 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10753 chr10 128193268 . G C 3.01 . DP=4;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,0,2;MQ=48;PV4=0.33,0.053,0.17,1 PL:DP:SP:GT:GQ 30,0,41:3:0:0/1:33 | |
| 10754 chr10 128200166 . AA AACCCTTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10755 chr10 128200585 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10756 chr10 128202320 . A ATTGGAAC 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=47 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 10757 chr10 128209769 . T C 35.5 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=48 PL:DP:SP:GT:GQ 68,12,0:4:0:1/1:72 | |
| 10758 chr10 128209797 . C T 41.2 . DP=7;AF1=0.5207;CI95=0.5,1;DP4=1,0,4,1;MQ=48;PV4=1,0.19,0.34,1 PL:DP:SP:GT:GQ 71,0,11:6:0:0/1:14 | |
| 10759 chr10 128209959 . G T 62.1 . DP=12;AF1=0.9966;CI95=0.5,1;DP4=0,1,0,10;MQ=47;PV4=1,0.00058,0.0033,1 PL:DP:SP:GT:GQ 91,1,0:11:0:1/1:23 | |
| 10760 chr10 128213112 . GGTGC G 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10761 chr10 128220898 . C CTTT 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,1,1,0.46 PL:DP:SP:GT:GQ 41,0,83:3:0:0/1:44 | |
| 10762 chr10 128228129 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 10763 chr10 128233874 . CT CTTGCGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10764 chr10 128247268 . C G 8.65 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 10765 chr10 128255423 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10766 chr10 128260863 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10767 chr10 128262865 . A C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 10768 chr10 128263697 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10769 chr10 128267124 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10770 chr10 128273097 . A G 6.2 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,44:2:0:0/1:37 | |
| 10771 chr10 128291533 . G T 8.64 . DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,1;MQ=47;PV4=1,0.075,0.3,1 PL:DP:SP:GT:GQ 38,0,41:3:0:0/1:39 | |
| 10772 chr10 128291674 . G GGCACCTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10773 chr10 128292974 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10774 chr10 128293549 . G T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 10775 chr10 128313874 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 10776 chr10 128323022 . G T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 10777 chr10 128331421 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10778 chr10 128345244 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10779 chr10 128357026 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10780 chr10 128359249 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10781 chr10 128364012 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10782 chr10 128364951 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10783 chr10 128375115 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 10784 chr10 128381288 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10785 chr10 128413036 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10786 chr10 128413520 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10787 chr10 128414029 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10788 chr10 128414058 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10789 chr10 128419233 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10790 chr10 128426922 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10791 chr10 128434408 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10792 chr10 128443031 . g gTACGTGTAGTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10793 chr10 128468424 . A G 5.48 . DP=2;AF1=0.5039;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,18:2:0:0/1:21 | |
| 10794 chr10 128473852 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10795 chr10 128477376 . C G 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 10796 chr10 128481733 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10797 chr10 128491350 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10798 chr10 128498880 . tg tGAGg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10799 chr10 128514083 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10800 chr10 128531873 . A T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10801 chr10 128587820 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10802 chr10 128588499 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10803 chr10 128589887 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 10804 chr10 128597411 . T G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 10805 chr10 128601892 . GCAGCC GCAGCCAGCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10806 chr10 128611068 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10807 chr10 128769105 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10808 chr10 128777355 . C G 3.02 . DP=2;AF1=0.5023;CI95=0.5,0.5;DP4=0,1,1,0;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,20:2:0:0/1:23 | |
| 10809 chr10 128781924 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10810 chr10 128804341 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 10811 chr10 128808986 . C CCTTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10812 chr10 128814840 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10813 chr10 128815176 . T C 3.98 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=50 PL:DP:SP:GT:GQ 33,6,0:2:0:1/1:49 | |
| 10814 chr10 128815247 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10815 chr10 128815252 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10816 chr10 128821714 . G A 7.87 . DP=2;AF1=0.5101;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,14:2:0:0/1:17 | |
| 10817 chr10 128832013 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10818 chr10 128855400 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10819 chr10 128878639 . A ACCTTCCC 3.8 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 39,0,44:2:0:0/1:41 | |
| 10820 chr10 128882547 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 10821 chr10 128895493 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10822 chr10 128902394 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 10823 chr10 128929234 . A G 13 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=46 PL:DP:SP:GT:GQ 44,6,0:2:0:1/1:49 | |
| 10824 chr10 128942577 . C CGAGCGATT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 10825 chr10 128946959 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10826 chr10 128973671 . C G 26 . DP=27;AF1=0.5002;CI95=0.5,0.5;DP4=0,2,0,6;MQ=48;PV4=1,0.0058,0.024,1 PL:DP:SP:GT:GQ 56,0,30:8:0:0/1:33 | |
| 10827 chr10 128974621 . C T 11.3 . DP=7;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,3;MQ=48;PV4=1,0.0045,0.12,1 PL:DP:SP:GT:GQ 41,0,130:7:0:0/1:44 | |
| 10828 chr10 128988034 . GAGTC G 4.42 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 40,0,44:2:0:0/1:42 | |
| 10829 chr10 128989156 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10830 chr10 129010286 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10831 chr10 129019157 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10832 chr10 129025006 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10833 chr10 129026595 . G A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 10834 chr10 129044285 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10835 chr10 129044395 . G GGAGTGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10836 chr10 129057230 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 10837 chr10 129068219 . G GCCTACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10838 chr10 129068923 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 10839 chr10 129071523 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 10840 chr10 129085919 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10841 chr10 129111241 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10842 chr10 129112385 . CTGCTCATG CTG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 10843 chr10 129149355 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10844 chr10 129151298 . C G 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 10845 chr10 129165060 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10846 chr10 129173625 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10847 chr10 129175871 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10848 chr10 129184297 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 10849 chr10 129184619 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10850 chr10 129193405 . A ATCTTAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10851 chr10 129196435 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 10852 chr10 129197604 . G GTT 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10853 chr10 129206735 . T TCC 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 10854 chr10 129213512 . G GTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10855 chr10 129231408 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10856 chr10 129234706 . T A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 10857 chr10 129241664 . C T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 10858 chr10 129244236 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10859 chr10 129246547 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 10860 chr10 129259339 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10861 chr10 129264661 . a aTACACC 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=49 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 10862 chr10 129267147 . T C 4.15 . DP=3;AF1=0.503;CI95=0.5,0.5;DP4=0,1,0,1;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,19:2:0:0/1:22 | |
| 10863 chr10 129281605 . T G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 10864 chr10 129282983 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 10865 chr10 129290077 . A G 3.55 . DP=2;AF1=0.5004;CI95=0.5,0.5;DP4=0,1,0,1;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,26:2:0:0/1:28 | |
| 10866 chr10 129322788 . C T 34.1 . DP=17;AF1=1;CI95=1,1;DP4=0,0,7,0;MQ=50 PL:DP:SP:GT:GQ 67,21,0:7:0:1/1:84 | |
| 10867 chr10 129326660 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10868 chr10 129327605 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10869 chr10 129328821 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 10870 chr10 129339660 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10871 chr10 129347571 . G C 33 . DP=7;AF1=0.5032;CI95=0.5,0.5;DP4=1,0,4,0;MQ=47;PV4=1,0.17,1,0.46 PL:DP:SP:GT:GQ 63,0,19:5:0:0/1:22 | |
| 10872 chr10 129350641 . C A 7.59 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 38,6,0:2:0:1/1:49 | |
| 10873 chr10 129350996 . AT ATTT 5.1 . INDEL;DP=3;AF1=0.5031;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,1,1,0.33 PL:DP:SP:GT:GQ 41,0,19:3:0:0/1:22 | |
| 10874 chr10 129362084 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10875 chr10 129368050 . CTAAGGA C 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 10876 chr10 129376121 . TTG TTGGTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10877 chr10 129381096 . G A 13.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10878 chr10 129398492 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10879 chr10 129409056 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10880 chr10 129412971 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10881 chr10 129440128 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10882 chr10 129493744 . T A 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,37:2:0:0/1:32 | |
| 10883 chr10 129503946 . GAA GAAAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10884 chr10 129504113 . G A 11.1 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 42,6,0:2:0:1/1:49 | |
| 10885 chr10 129514065 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10886 chr10 129530459 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10887 chr10 129534068 . G C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 10888 chr10 129536642 . G A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 10889 chr10 129539070 . T A 14.9 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=48 PL:DP:SP:GT:GQ 46,6,0:2:0:1/1:49 | |
| 10890 chr10 129553218 . C CGGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10891 chr10 129557141 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 10892 chr10 129576816 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 10893 chr10 129580556 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 10894 chr10 129584231 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10895 chr10 129591828 . g gGGAGGACC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10896 chr10 129600604 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 10897 chr10 129610136 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 10898 chr10 129624907 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10899 chr10 129628788 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10900 chr10 129638388 . T TGGTCC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 10901 chr10 129641960 . C T 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 10902 chr10 129652223 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 10903 chr10 129659306 . C G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 10904 chr10 129662159 . TT TTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10905 chr10 129663823 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10906 chr10 129681616 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10907 chr10 129686321 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10908 chr10 129686623 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10909 chr10 129688803 . GGGGA G 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 10910 chr10 129703618 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10911 chr10 129711231 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 10912 chr10 129719149 . C CGAG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 10913 chr10 129732258 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10914 chr10 129745566 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10915 chr10 129746375 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10916 chr10 129752355 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 10917 chr10 129762987 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10918 chr10 129769107 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10919 chr10 129774836 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10920 chr10 129791423 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10921 chr10 129791837 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10922 chr10 129796323 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10923 chr10 129825461 . G C 4.77 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10924 chr10 129830010 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10925 chr10 129845902 . G A 4.77 . DP=4;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,3,0;MQ=50;PV4=0.25,0.0098,0.33,1 PL:DP:SP:GT:GQ 33,0,38:4:0:0/1:35 | |
| 10926 chr10 129846010 . G A 97 . DP=30;AF1=1;CI95=1,1;DP4=0,0,22,4;MQ=50 PL:DP:SP:GT:GQ 130,78,0:26:0:1/1:99 | |
| 10927 chr10 129847120 . G T 45.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=43 PL:DP:SP:GT:GQ 77,6,0:2:0:1/1:49 | |
| 10928 chr10 129854369 . T C 99 . DP=17;AF1=1;CI95=1,1;DP4=0,0,14,0;MQ=46 PL:DP:SP:GT:GQ 143,42,0:14:0:1/1:99 | |
| 10929 chr10 129856876 . A T 27.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=45 PL:DP:SP:GT:GQ 59,6,0:2:0:1/1:49 | |
| 10930 chr10 129858871 . A G 4.19 . DP=2;AF1=0.5127;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,13:2:0:0/1:16 | |
| 10931 chr10 129859906 . TTCT TT 8.19 . INDEL;DP=4;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 10932 chr10 129859907 . TCT TCTTGGCT 12.7 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10933 chr10 129867322 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10934 chr10 129887984 . GTCCCAC GTCCCACTCCTCCCAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10935 chr10 129890157 . C T 22.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=45 PL:DP:SP:GT:GQ 54,6,0:2:0:1/1:49 | |
| 10936 chr10 129903522 . C G 25 . DP=30;AF1=0.5;CI95=0.5,0.5;DP4=3,3,0,4;MQ=49;PV4=0.2,0.11,0.021,0.41 PL:DP:SP:GT:GQ 55,0,151:10:7:0/1:58 | |
| 10937 chr10 129904917 . G A 99 . DP=34;AF1=0.5;CI95=0.5,0.5;DP4=7,8,7,5;MQ=47;PV4=0.7,1,1.3e-33,1 PL:DP:SP:GT:GQ 255,0,255:27:2:0/1:99 | |
| 10938 chr10 129906798 . C G 17.1 . DP=33;AF1=0.5;CI95=0.5,0.5;DP4=11,0,0,6;MQ=43;PV4=8.1e-05,9.6e-07,1,0.25 PL:DP:SP:GT:GQ 47,0,178:17:41:0/1:50 | |
| 10939 chr10 129907741 . G A 23.5 . DP=19;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=50 PL:DP:SP:GT:GQ 56,12,0:4:0:1/1:72 | |
| 10940 chr10 129908491 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10941 chr10 129908724 . T A 6.98 . DP=32;AF1=0.4999;CI95=0.5,0.5;DP4=6,5,1,3;MQ=48;PV4=0.57,0.014,0.43,1 PL:DP:SP:GT:GQ 36,0,255:15:2:0/1:39 | |
| 10942 chr10 129908727 . A T 62 . DP=36;AF1=0.5;CI95=0.5,0.5;DP4=9,1,0,12;MQ=48;PV4=2e-05,0.0041,0.00047,1 PL:DP:SP:GT:GQ 92,0,193:22:47:0/1:95 | |
| 10943 chr10 129910132 . T A 99 . DP=42;AF1=0.5;CI95=0.5,0.5;DP4=2,9,12,12;MQ=48;PV4=0.14,9.3e-11,0.0021,1 PL:DP:SP:GT:GQ 217,0,228:35:9:0/1:99 | |
| 10944 chr10 129921195 . A T 81 . DP=23;AF1=0.5;CI95=0.5,0.5;DP4=6,9,3,5;MQ=49;PV4=1,3.1e-05,3.5e-11,1 PL:DP:SP:GT:GQ 111,0,255:23:0:0/1:99 | |
| 10945 chr10 129942070 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10946 chr10 129942395 . G T 3.05 . DP=2;AF1=0.5078;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,15:2:0:0/1:18 | |
| 10947 chr10 129945257 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10948 chr10 129951133 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10949 chr10 130008984 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10950 chr10 130012561 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10951 chr10 130020478 . G GTGAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10952 chr10 130035410 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10953 chr10 130039907 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10954 chr10 130040532 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10955 chr10 130042648 . t tTA 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 10956 chr10 130045549 . G GTT 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 10957 chr10 130060315 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10958 chr10 130072264 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10959 chr10 130077109 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10960 chr10 130080021 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 10961 chr10 130087392 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10962 chr10 130087680 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10963 chr10 130109455 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10964 chr10 130113206 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 10965 chr10 130121730 . GGAGCC G 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 10966 chr10 130136256 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10967 chr10 130160703 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10968 chr10 130167235 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 10969 chr10 130173667 . T G 4.13 . DP=2;AF1=0.5001;CI95=0.5,0.5;DP4=0,1,1,0;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,30:2:0:0/1:31 | |
| 10970 chr10 130185899 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10971 chr10 130194184 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10972 chr10 130206050 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10973 chr10 130207166 . tg tGCAg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10974 chr10 130213427 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10975 chr10 130219480 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10976 chr10 130249315 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10977 chr10 130255834 . g gCCA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10978 chr10 130256140 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 10979 chr10 130257942 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10980 chr10 130261675 . T C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 10981 chr10 130263002 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 10982 chr10 130266426 . C G 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,43:2:0:0/1:34 | |
| 10983 chr10 130267220 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 10984 chr10 130276834 . A G 3.01 . DP=3;AF1=0.4997;CI95=0.5,0.5;DP4=1,1,0,1;MQ=48;PV4=1,0,0,0.38 PL:DP:SP:GT:GQ 30,0,91:3:0:0/1:33 | |
| 10985 chr10 130278263 . g gGA 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 10986 chr10 130297043 . TA TAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10987 chr10 130323414 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 10988 chr10 130329174 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10989 chr10 130334436 . TT TTAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 10990 chr10 130336954 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 10991 chr10 130341259 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 10992 chr10 130345152 . T C 32.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=46 PL:DP:SP:GT:GQ 64,6,0:2:0:1/1:49 | |
| 10993 chr10 130360526 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 10994 chr10 130364994 . TCGG T 6.56 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10995 chr10 130387096 . TGAAG TG 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 10996 chr10 130392308 . a aAG 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 10997 chr10 130411091 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 10998 chr10 130414654 . G C 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 10999 chr10 130425652 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 11000 chr10 130425677 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 11001 chr10 130426042 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11002 chr10 130427795 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11003 chr10 130429053 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11004 chr10 130442285 . c cTCTCTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11005 chr10 130444136 . A T 31 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,2,1;MQ=48 PL:DP:SP:GT:GQ 63,9,0:3:0:1/1:63 | |
| 11006 chr10 130447078 . ttc tTCAtc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11007 chr10 130450240 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 11008 chr10 130477012 . G GTCACGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11009 chr10 130490426 . C CT 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 11010 chr10 130491277 . AGTG A 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11011 chr10 130497968 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11012 chr10 130503611 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11013 chr10 130509513 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11014 chr10 130524002 . g gTT 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 11015 chr10 130524173 . t tCAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11016 chr10 130544263 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 11017 chr10 130548711 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11018 chr10 130565163 . T TACGCACGTCA 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=48 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 11019 chr10 130578812 . G C 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11020 chr10 130596403 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11021 chr10 130603435 . A G 6.98 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,40:2:0:0/1:38 | |
| 11022 chr10 130625308 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 11023 chr10 130630850 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11024 chr10 130630925 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11025 chr10 130653597 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 11026 chr10 130682633 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 11027 chr10 130691338 . T G 90 . DP=18;AF1=1;CI95=1,1;DP4=0,0,9,1;MQ=48 PL:DP:SP:GT:GQ 123,30,0:10:0:1/1:99 | |
| 11028 chr10 130730584 . G T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 11029 chr10 130737441 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11030 chr10 130757862 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11031 chr10 130764401 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11032 chr10 130783869 . C CGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11033 chr10 130785684 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11034 chr10 130794338 . G A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 11035 chr10 130809295 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11036 chr10 130815337 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11037 chr10 130815975 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11038 chr10 130832003 . T G 3.02 . DP=2;AF1=0.5002;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,27:2:0:0/1:28 | |
| 11039 chr10 130852398 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 11040 chr10 130856232 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11041 chr10 130857645 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11042 chr10 130863927 . G C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 11043 chr10 130874944 . tg tGAAg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11044 chr10 130875955 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11045 chr10 130885168 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11046 chr10 130914888 . cct cCTct 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11047 chr10 130917641 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11048 chr10 130921318 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11049 chr10 130922016 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11050 chr10 130922033 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11051 chr10 130925433 . cagctgag cag 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 11052 chr10 130932805 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11053 chr10 130936055 . C G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 11054 chr10 130943493 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11055 chr10 130956439 . A C 3.98 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 33,6,0:2:0:1/1:49 | |
| 11056 chr10 130969217 . G GAGCCTCATGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11057 chr10 130969586 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 11058 chr10 130977507 . GAGA GAGAAGA 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 11059 chr10 130985198 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 11060 chr10 131031467 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 11061 chr10 131036623 . GGC G 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 11062 chr10 131037638 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11063 chr10 131042618 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 11064 chr10 131048567 . A G 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 11065 chr10 131071474 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 11066 chr10 131079243 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11067 chr10 131079259 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11068 chr10 131103654 . G T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 11069 chr10 131107110 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11070 chr10 131107118 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11071 chr10 131114176 . GGA G 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 11072 chr10 131120551 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 11073 chr10 131148114 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 11074 chr10 131151003 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11075 chr10 131152410 . gg gGGAg 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 11076 chr10 131175806 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11077 chr10 131175828 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11078 chr10 131182812 . G A 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,0,1;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 11079 chr10 131187657 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 11080 chr10 131189932 . AGGG AG 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 11081 chr10 131196258 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11082 chr10 131211649 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11083 chr10 131238810 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11084 chr10 131245309 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 11085 chr10 131250128 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 11086 chr10 131257116 . T G 5.46 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11087 chr10 131260911 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 11088 chr10 131282309 . caa cAAGAGAGaa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11089 chr10 131292838 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 11090 chr10 131295364 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11091 chr10 131320644 . T TCCTTGGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11092 chr10 131325070 . GT GTTTT 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 11093 chr10 131347835 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11094 chr10 131347854 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11095 chr10 131351291 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11096 chr10 131351715 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11097 chr10 131354838 . T C 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,41:2:0:0/1:35 | |
| 11098 chr10 131356348 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11099 chr10 131373077 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11100 chr10 131379538 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11101 chr10 131391537 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 11102 chr10 131414684 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11103 chr10 131425777 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11104 chr10 131430406 . g gAGACCCAGATA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11105 chr10 131436034 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 11106 chr10 131470024 . C T 20.1 . DP=3;AF1=0.505;CI95=0.5,0.5;DP4=1,0,1,1;MQ=47;PV4=1,1,0.29,1 PL:DP:SP:GT:GQ 50,0,17:3:0:0/1:20 | |
| 11107 chr10 131476543 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11108 chr10 131476551 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11109 chr10 131477073 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11110 chr10 131488906 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 11111 chr10 131494193 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11112 chr10 131498815 . G GGGGTCGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11113 chr10 131504423 . TGCCCA T 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 11114 chr10 131506410 . T A,C 6.02 . DP=10;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=45 PL:DP:SP:GT:GQ 48,18,35,12,0,35:3:0:1/1:49 | |
| 11115 chr10 131512972 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11116 chr10 131516451 . GCTAC GC 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 11117 chr10 131523402 . G GTA 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 11118 chr10 131545896 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11119 chr10 131566047 . CC CCTTCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11120 chr10 131572264 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 11121 chr10 131629875 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 11122 chr10 131652686 . T G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 11123 chr10 131663651 . A G 13.9 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 45,6,0:2:0:1/1:49 | |
| 11124 chr10 131664307 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 11125 chr10 131735463 . AGG A 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 11126 chr10 131741144 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11127 chr10 131755663 . TT TTCCGTCT 9.05 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 11128 chr10 131776344 . G T 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11129 chr10 131835012 . C CGCTTCT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 11130 chr10 131846502 . AGCT AGCTTTGCT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 11131 chr10 131867482 . g gATA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11132 chr10 131908556 . t tTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11133 chr10 131914066 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11134 chr10 131926801 . G C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 11135 chr10 131928027 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 11136 chr10 131929203 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11137 chr10 131930294 . G A 33 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=3,1,3,1;MQ=45;PV4=1,0.0057,0.016,1 PL:DP:SP:GT:GQ 63,0,132:8:0:0/1:66 | |
| 11138 chr10 131930448 . G A 9.31 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=43 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 11139 chr10 131935145 . GG GGAGATCTAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11140 chr10 131944088 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11141 chr10 131946080 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11142 chr10 131954649 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11143 chr10 131957903 . AA AAACCCCGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11144 chr10 131958210 . G C 38 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=9,0,5,0;MQ=48;PV4=1,0.00012,0.015,0.21 PL:DP:SP:GT:GQ 68,0,199:14:0:0/1:71 | |
| 11145 chr10 131961150 . ac aCCTc 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11146 chr10 131962167 . T TGACGCTTCTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11147 chr10 131969879 . T A 5.46 . DP=3;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,44:2:0:0/1:37 | |
| 11148 chr10 131979784 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11149 chr10 131985561 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11150 chr10 131986473 . TTCT TTCTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11151 chr10 131990524 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 11152 chr10 132000163 . tg tGTAg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11153 chr10 132002075 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 11154 chr10 132018454 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 11155 chr10 132055723 . GGGCC G 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 11156 chr10 132059453 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 11157 chr10 132081031 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11158 chr10 132081237 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11159 chr10 132084947 . G A 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 11160 chr10 132085491 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 11161 chr10 132096016 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 11162 chr10 132106149 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 11163 chr10 132107422 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 11164 chr10 132108140 . AG AGTTG 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 11165 chr10 132134982 . C CTA 11.8 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 11166 chr10 132135015 . G GTTCGTGAC 12.7 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11167 chr10 132136813 . G A 12.3 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 11168 chr10 132153111 . A G 16.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=48 PL:DP:SP:GT:GQ 48,6,0:2:0:1/1:49 | |
| 11169 chr10 132158964 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11170 chr10 132165963 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11171 chr10 132179006 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 11172 chr10 132186784 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 11173 chr10 132189245 . C T 13.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47 PL:DP:SP:GT:GQ 45,6,0:2:0:1/1:49 | |
| 11174 chr10 132202715 . g gCGT 12.7 . INDEL;DP=5;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11175 chr10 132215155 . A G 6.98 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 11176 chr10 132216935 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11177 chr10 132217012 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11178 chr10 132217837 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11179 chr10 132217863 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11180 chr10 132221323 . A G 10.2 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=42 PL:DP:SP:GT:GQ 41,6,0:2:0:1/1:49 | |
| 11181 chr10 132234373 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11182 chr10 132237615 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 11183 chr10 132251956 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 11184 chr10 132254392 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11185 chr10 132291145 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11186 chr10 132291153 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11187 chr10 132302835 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=47 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11188 chr10 132305437 . t tTCAAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11189 chr10 132314463 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 11190 chr10 132344355 . CCGCTCGCT CCGCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11191 chr10 132350409 . aatt a 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 11192 chr10 132356251 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11193 chr10 132362661 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 11194 chr10 132375666 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 11195 chr10 132402156 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11196 chr10 132420062 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11197 chr10 132420074 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11198 chr10 132421324 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11199 chr10 132422506 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11200 chr10 132429277 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11201 chr10 132436789 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11202 chr10 132455532 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11203 chr10 132474977 . A AAATGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11204 chr10 132481415 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 11205 chr10 132488364 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11206 chr10 132488814 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11207 chr10 132492136 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11208 chr10 132494733 . C T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 11209 chr10 132495170 . c cCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11210 chr10 132509660 . TA TAAACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11211 chr10 132515884 . GC GCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11212 chr10 132527101 . A ATAAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11213 chr10 132531297 . g gAATGAGAGT 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=49 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 11214 chr10 132576848 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 11215 chr10 132613866 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 11216 chr10 132614858 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11217 chr10 132623312 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 11218 chr10 132627273 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11219 chr10 132634305 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 11220 chr10 132638921 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11221 chr10 132646753 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 11222 chr10 132654362 . T A 5.46 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11223 chr10 132658373 . TGGG TGGGGG 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 11224 chr10 132659439 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11225 chr10 132662194 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11226 chr10 132675732 . ct cTt 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 11227 chr10 132678184 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11228 chr10 132699900 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11229 chr10 132701695 . G C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 11230 chr10 132703105 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11231 chr10 132714711 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 11232 chr10 132722369 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11233 chr10 132726893 . A T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 11234 chr10 132732326 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 11235 chr10 132740570 . C G 5.46 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,44:2:0:0/1:37 | |
| 11236 chr10 132754824 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11237 chr10 132760745 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11238 chr10 132769663 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11239 chr10 132771484 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11240 chr10 132774289 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11241 chr10 132774297 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11242 chr10 132783706 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11243 chr10 132787356 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11244 chr10 132808705 . CT CTGTT 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 11245 chr10 132825309 . A T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 11246 chr10 132826035 . Gacacacacacacacacacacacatacacacacacac Gacacacacacacacacatacacacacacac 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11247 chr10 132849759 . TGG TGGGG 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 11248 chr10 132858478 . G T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 11249 chr10 132872205 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11250 chr10 132885319 . A G 7.11 . DP=8;AF1=0.5206;CI95=0.5,1;DP4=1,0,2,0;MQ=49;PV4=1,1,0.17,0.4 PL:DP:SP:GT:GQ 36,0,11:3:0:0/1:14 | |
| 11251 chr10 132885454 . T G 5.29 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 35,6,0:2:0:1/1:49 | |
| 11252 chr10 132891987 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 11253 chr10 132921382 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11254 chr10 132921994 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11255 chr10 132932289 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11256 chr10 132944381 . G GGTTATTGGA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11257 chr10 132946158 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11258 chr10 132958027 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 11259 chr10 132959499 . T C 8.44 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 39,6,0:2:0:1/1:49 | |
| 11260 chr10 132975167 . tcacacac tCAcacacac 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11261 chr10 132985514 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 11262 chr10 133021358 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11263 chr10 133023220 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 11264 chr10 133025914 . G GAGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11265 chr10 133059148 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11266 chr10 133059522 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11267 chr10 133067053 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11268 chr10 133071552 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11269 chr10 133071560 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11270 chr10 133096182 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11271 chr10 133111860 . T TGAATCAATGGGCG 4.26 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=48 PL:DP:SP:GT:GQ 41,6,0:2:0:1/1:49 | |
| 11272 chr10 133122551 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 11273 chr10 133127276 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11274 chr10 133140569 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11275 chr10 133147387 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11276 chr10 133161684 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11277 chr10 133179975 . CCT CCTTGGTACT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11278 chr10 133191143 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 11279 chr10 133193521 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11280 chr10 133195471 . CT CTGAGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11281 chr10 133207867 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11282 chr10 133207874 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11283 chr10 133221507 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11284 chr10 133234073 . A AGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11285 chr10 133255696 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 11286 chr10 133280240 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11287 chr10 133310689 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11288 chr10 133315888 . C CGTGCGCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11289 chr10 133323802 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11290 chr10 133335538 . T A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 11291 chr10 133337439 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 11292 chr10 133359733 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11293 chr10 133365233 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11294 chr10 133377301 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 11295 chr10 133435204 . C G 7.8 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 11296 chr10 133439652 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11297 chr10 133468941 . G A 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11298 chr10 133491637 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11299 chr10 133495597 . c cAGTGA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11300 chr10 133535448 . TG TGAAG 7.35 . INDEL;DP=2;AF1=0.5008;CI95=0.5,0.5;DP4=0,1,0,1;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,25:2:0:0/1:28 | |
| 11301 chr10 133542171 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 11302 chr10 133544285 . tc tCCAGc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11303 chr10 133544988 . t tGTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11304 chr10 133579669 . T A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 11305 chr10 133592645 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11306 chr10 133602969 . A C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 11307 chr10 133608237 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11308 chr10 133611314 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11309 chr10 133616642 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11310 chr10 133622456 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11311 chr10 133630050 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11312 chr10 133630197 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11313 chr10 133638289 . C CAGT 9.94 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 11314 chr10 133639514 . AG AGTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11315 chr10 133642921 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11316 chr10 133645754 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 11317 chr10 133652791 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11318 chr10 133654051 . AA AACTCGTGTGTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11319 chr10 133658893 . T C 18.8 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=46 PL:DP:SP:GT:GQ 50,6,0:2:0:1/1:49 | |
| 11320 chr10 133665618 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11321 chr10 133727693 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 11322 chr10 133740241 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 11323 chr10 133746764 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 11324 chr10 133757471 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11325 chr10 133757756 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 11326 chr10 133758358 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11327 chr10 133759010 . C G 3.69 . DP=8;AF1=0.5334;CI95=0.5,1;DP4=0,1,0,2;MQ=47;PV4=1,1,0.3,1 PL:DP:SP:GT:GQ 31,0,9:3:0:0/1:12 | |
| 11328 chr10 133767203 . C A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 11329 chr10 133827864 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11330 chr10 133833687 . T A 3.04 . DP=2;AF1=0.5061;CI95=0.5,0.5;DP4=0,1,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,16:2:0:0/1:19 | |
| 11331 chr10 133838908 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11332 chr10 133849575 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11333 chr10 133853658 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11334 chr10 133854876 . GCC GCCCCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11335 chr10 133863562 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 11336 chr10 133869388 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11337 chr10 133917514 . A T 6.98 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,44:2:0:0/1:38 | |
| 11338 chr10 133921028 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 11339 chr10 133921155 . T C 22.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=45 PL:DP:SP:GT:GQ 54,6,0:2:0:1/1:49 | |
| 11340 chr10 133930560 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11341 chr10 133931627 . G GTCTGT 7.35 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 11342 chr10 133938966 . G C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 11343 chr10 133943796 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11344 chr10 133948634 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11345 chr10 133965113 . ctgatt ct 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11346 chr10 133969328 . C T 10.4 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 11347 chr10 133972147 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11348 chr10 133973151 . C CA 8.83 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=39 PL:DP:SP:GT:GQ 47,6,0:2:0:1/1:49 | |
| 11349 chr10 133975079 . GTAT G 7.62 . INDEL;DP=2;AF1=0.543;CI95=0.5,1;DP4=1,0,0,1;MQ=37;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,8:2:0:0/1:11 | |
| 11350 chr10 133983649 . C CTCGAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11351 chr10 133986569 . c cAGTT 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11352 chr10 133986624 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11353 chr10 133988928 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 11354 chr10 134010435 . AGG AG 57.5 . INDEL;DP=10;AF1=0.5;CI95=0.5,0.5;DP4=1,1,1,3;MQ=50;PV4=1,0.00049,1,0.45 PL:DP:SP:GT:GQ 95,0,59:6:0:0/1:62 | |
| 11355 chr10 134014822 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11356 chr10 134016115 . G A 93.5 . DP=8;AF1=1;CI95=0.5,1;DP4=1,0,6,0;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 125,7,0:7:0:1/1:57 | |
| 11357 chr10 134037997 . C T 3.01 . DP=5;AF1=0.4997;CI95=0.5,0.5;DP4=0,3,0,1;MQ=48;PV4=1,0,0,0.11 PL:DP:SP:GT:GQ 30,0,114:4:0:0/1:33 | |
| 11358 chr10 134040319 . G A 64 . DP=20;AF1=0.5;CI95=0.5,0.5;DP4=10,0,6,2;MQ=49;PV4=0.18,5.2e-12,0.012,0.074 PL:DP:SP:GT:GQ 94,0,215:18:7:0/1:97 | |
| 11359 chr10 134059668 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11360 chr10 134060884 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 11361 chr10 134067106 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11362 chr10 134067935 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11363 chr10 134071848 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 11364 chr10 134083825 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 11365 chr10 134084539 . ACC ACTACTTCC 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11366 chr10 134085645 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11367 chr10 134091093 . A AC 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 11368 chr10 134112602 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11369 chr10 134114792 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 11370 chr10 134119745 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11371 chr10 134122833 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 11372 chr10 134123132 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11373 chr10 134131451 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11374 chr10 134137839 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11375 chr10 134151060 . CCA CCACA 3.8 . INDEL;DP=7;AF1=0.5;CI95=0.5,0.5;DP4=0,2,1,0;MQ=50;PV4=0.33,1,1,1 PL:DP:SP:GT:GQ 39,0,75:3:0:0/1:42 | |
| 11376 chr10 134151232 . C G 4.13 . DP=21;AF1=0.4998;CI95=0.5,0.5;DP4=1,4,0,3;MQ=49;PV4=1,0.31,0.086,1 PL:DP:SP:GT:GQ 32,0,78:8:0:0/1:35 | |
| 11377 chr10 134155999 . G C 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,37:2:0:0/1:34 | |
| 11378 chr10 134161633 . A G 42 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,2,1;MQ=46 PL:DP:SP:GT:GQ 74,9,0:3:0:1/1:63 | |
| 11379 chr10 134166986 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 11380 chr10 134167699 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11381 chr10 134183339 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11382 chr10 134204582 . T TCG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,37:2:0:0/1:39 | |
| 11383 chr10 134206331 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11384 chr10 134213712 . AGTG A 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 11385 chr10 134237179 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 11386 chr10 134244082 . gtgt gTGTtgt 10.8 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 11387 chr10 134246697 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 11388 chr10 134248390 . T TCACACCGTGGG 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=47 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 11389 chr10 134264951 . CCT CCTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11390 chr10 134284528 . C T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 11391 chr10 134300278 . C A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 11392 chr10 134302347 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11393 chr10 134303208 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11394 chr10 134306964 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11395 chr10 134317433 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11396 chr10 134323278 . A AGAACAGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11397 chr10 134338643 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11398 chr10 134355953 . att a 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 11399 chr10 134359414 . A C 5.46 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,44:2:0:0/1:37 | |
| 11400 chr10 134369296 . G T 8.65 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 11401 chr10 134380473 . A C 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 11402 chr10 134388735 . GA GACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11403 chr10 134389800 . A T 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 11404 chr10 134406584 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11405 chr10 134417080 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 11406 chr10 134417334 . T TTAAGAGA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 11407 chr10 134424990 . CC CCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11408 chr10 134435085 . c cT 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 11409 chr10 134440821 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11410 chr10 134445192 . GG GGCTTTTAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11411 chr10 134449419 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11412 chr10 134453217 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11413 chr10 134466163 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 11414 chr10 134480605 . G GCA 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 11415 chr10 134518816 . GCCACCC GCC 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 11416 chr10 134529204 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 11417 chr10 134529769 . GAA G 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 11418 chr10 134532162 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11419 chr10 134538334 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 11420 chr10 134549846 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11421 chr10 134561773 . T A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 11422 chr10 134569835 . tcgtg t 8.34 . INDEL;DP=2;AF1=0.7303;CI95=0.5,1;DP4=0,1,0,1;MQ=36;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,2:2:0:0/1:3 | |
| 11423 chr10 134570285 . gagaagaag gagaag 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 11424 chr10 134576111 . T A 6.98 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,44:2:0:0/1:38 | |
| 11425 chr10 134583501 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11426 chr10 134604116 . A AAAACACCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11427 chr10 134604890 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11428 chr10 134606882 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11429 chr10 134620296 . A T 7.8 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 11430 chr10 134622408 . T C 45.3 . DP=24;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=48 PL:DP:SP:GT:GQ 78,15,0:5:0:1/1:75 | |
| 11431 chr10 134624839 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 11432 chr10 134637494 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11433 chr10 134644160 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11434 chr10 134646988 . C T 67 . DP=39;AF1=0.5;CI95=0.5,0.5;DP4=4,19,1,12;MQ=49;PV4=0.63,1.7e-09,0.00026,1 PL:DP:SP:GT:GQ 97,0,255:36:2:0/1:99 | |
| 11435 chr10 134648048 . C T 5.46 . DP=6;AF1=0.4999;CI95=0.5,0.5;DP4=3,1,2,0;MQ=49;PV4=1,0.021,0.089,0.076 PL:DP:SP:GT:GQ 34,0,153:6:0:0/1:37 | |
| 11436 chr10 134664875 . A G 3.02 . DP=7;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11437 chr10 134671153 . C T 3.01 . DP=10;AF1=0.4997;CI95=0.5,0.5;DP4=2,3,0,2;MQ=49;PV4=1,0.21,0.059,0.073 PL:DP:SP:GT:GQ 30,0,141:7:0:0/1:33 | |
| 11438 chr10 134709019 . aa aAATa 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 11439 chr10 134724017 . cct c 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 11440 chr10 134725911 . T G 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11441 chr10 134730492 . CGGCCAG C 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 11442 chr10 134750604 . C A 95.5 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=42 PL:DP:SP:GT:GQ 128,12,0:4:0:1/1:72 | |
| 11443 chr10 134755298 . C G 3.01 . DP=21;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,3;MQ=50;PV4=1,0.0088,1,1 PL:DP:SP:GT:GQ 30,0,32:4:0:0/1:31 | |
| 11444 chr10 134758110 . GG GGTG 7.35 . INDEL;DP=2;AF1=0.5001;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,34:2:0:0/1:37 | |
| 11445 chr10 134774386 . GGG GGGTCCGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11446 chr10 134789562 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 11447 chr10 134809808 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 11448 chr10 134820919 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11449 chr10 134821101 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11450 chr10 134839824 . CA CAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11451 chr10 134851867 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11452 chr10 134864241 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11453 chr10 134871477 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11454 chr10 134875888 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 11455 chr10 134910629 . G A 99 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=2,1,5,7;MQ=47;PV4=0.57,0.0038,0.021,0.19 PL:DP:SP:GT:GQ 203,0,82:15:2:0/1:85 | |
| 11456 chr10 134914004 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11457 chr10 134920267 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 11458 chr10 134928012 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11459 chr10 134930300 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11460 chr10 134934921 . t tCCG 11.8 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 11461 chr10 134945049 . C A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 11462 chr10 134961923 . gca g 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 11463 chr10 134965030 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11464 chr10 134975804 . GGCA GGCAAGTGGCTGCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11465 chr10 134980217 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11466 chr10 134981837 . T C 84.5 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=43 PL:DP:SP:GT:GQ 117,12,0:4:0:1/1:72 | |
| 11467 chr10 134990629 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11468 chr10 134992497 . C G 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11469 chr10 134999869 . G A 22 . DP=10;AF1=0.5;CI95=0.5,0.5;DP4=2,3,0,4;MQ=49;PV4=0.44,0.00069,2.4e-06,1 PL:DP:SP:GT:GQ 52,0,178:9:4:0/1:55 | |
| 11470 chr10 135003078 . G A 12.3 . DP=4;AF1=0.5;CI95=0.5,0.5;DP4=1,0,2,0;MQ=47;PV4=1,0.069,0.23,1 PL:DP:SP:GT:GQ 42,0,41:3:0:0/1:41 | |
| 11471 chr10 135003866 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11472 chr10 135014510 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 11473 chr10 135022901 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 11474 chr10 135025451 . ac aCGc 7.44 . INDEL;DP=5;AF1=0.5128;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,13:2:0:0/1:16 | |
| 11475 chr10 135032362 . T C 13.4 . DP=8;AF1=0.7303;CI95=0.5,1;DP4=1,0,0,3;MQ=49;PV4=0.25,1,0.33,0.049 PL:DP:SP:GT:GQ 42,0,2:4:0:0/1:3 | |
| 11476 chr10 135040155 . A G 27.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 59,6,0:2:0:1/1:49 | |
| 11477 chr10 135053060 . C G 6.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 11478 chr10 135053123 . A G 84 . DP=15;AF1=1;CI95=1,1;DP4=0,0,12,0;MQ=48 PL:DP:SP:GT:GQ 117,36,0:12:0:1/1:99 | |
| 11479 chr10 135053773 . G A 5.65 . DP=9;AF1=0.5335;CI95=0.5,1;DP4=1,0,3,0;MQ=50;PV4=1,0.24,0.33,0.035 PL:DP:SP:GT:GQ 34,0,9:4:0:0/1:12 | |
| 11480 chr10 135056089 . AC ACGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11481 chr10 135056836 . G A,C 6.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,1;MQ=44 PL:DP:SP:GT:GQ 57,25,35,22,0,35:2:0:1/1:41 | |
| 11482 chr10 135064200 . g gNNNNNNNNNNNNNNNNNN 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11483 chr10 135069845 . T G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 11484 chr10 135076523 . C A 9.52 . DP=6;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,1;MQ=49;PV4=1,0.092,0,1 PL:DP:SP:GT:GQ 39,0,70:4:0:0/1:42 | |
| 11485 chr10 135076596 . T C 99 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=3,11,5,5;MQ=48;PV4=0.2,1.6e-05,4.8e-07,1 PL:DP:SP:GT:GQ 190,0,255:24:7:0/1:99 | |
| 11486 chr10 135077147 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 11487 chr10 135077311 . C G 3.73 . DP=5;AF1=0.5429;CI95=0.5,1;DP4=0,1,0,2;MQ=49;PV4=1,1,0.17,1 PL:DP:SP:GT:GQ 31,0,8:3:0:0/1:11 | |
| 11488 chr10 135082346 . A G 24.5 . DP=16;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=49 PL:DP:SP:GT:GQ 57,12,0:4:0:1/1:72 | |
| 11489 chr10 135082757 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 11490 chr10 135084601 . T C 92.1 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,6;MQ=45 PL:DP:SP:GT:GQ 125,18,0:6:0:1/1:90 | |
| 11491 chr10 135084731 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 11492 chr10 135085426 . A G 7.8 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 11493 chr10 135086380 . C T 67.5 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,1,3;MQ=46 PL:DP:SP:GT:GQ 100,12,0:4:0:1/1:72 | |
| 11494 chr10 135096784 . A G 99 . DP=17;AF1=1;CI95=0.5,1;DP4=1,0,0,11;MQ=46;PV4=0.083,1,0.29,1 PL:DP:SP:GT:GQ 135,11,0:12:0:1/1:66 | |
| 11495 chr10 135096825 . C T 65 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=0,7,0,6;MQ=47;PV4=1,5.4e-06,0.044,1 PL:DP:SP:GT:GQ 95,0,182:13:0:0/1:98 | |
| 11496 chr10 135097434 . A G 3.59 . DP=44;AF1=0.51;CI95=0.5,0.5;DP4=0,1,0,2;MQ=49;PV4=1,0.42,0.33,1 PL:DP:SP:GT:GQ 31,0,14:3:0:0/1:17 | |
| 11497 chr10 135106691 . CAG CAAG,CACAAGAG 7.38 . INDEL;DP=16;AF1=0.505;CI95=0.5,0.5;DP4=1,0,0,3;MQ=50;PV4=0.25,1,1,1 PL:DP:SP:GT:GQ 67,23,26,40,0,44:4:0:0/1:20 | |
| 11498 chr10 135109965 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11499 chr10 135111407 . A T 4.13 . DP=6;AF1=0.4998;CI95=0.5,0.5;DP4=4,0,2,0;MQ=48;PV4=1,0.2,0.0066,0.47 PL:DP:SP:GT:GQ 32,0,110:6:0:0/1:35 | |
| 11500 chr10 135112940 . C T 10.4 . DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,1,2,0;MQ=46;PV4=0.33,0.0076,1,1 PL:DP:SP:GT:GQ 40,0,37:3:0:0/1:38 | |
| 11501 chr10 135121858 . A T 12.3 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 11502 chr10 135130030 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11503 chr10 135130140 . C A 7.59 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=48 PL:DP:SP:GT:GQ 38,6,0:2:0:1/1:49 | |
| 11504 chr10 135130748 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11505 chr10 135134084 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11506 chr10 135152413 . A T 3.55 . DP=3;AF1=0.5006;CI95=0.5,0.5;DP4=0,1,2,0;MQ=47;PV4=0.33,0.065,0.26,0.2 PL:DP:SP:GT:GQ 31,0,25:3:0:0/1:27 | |
| 11507 chr10 135158479 . G T 4.77 . DP=3;AF1=0.4999;CI95=0.5,0.5;DP4=0,2,0,1;MQ=48;PV4=1,1,0,0.089 PL:DP:SP:GT:GQ 33,0,53:3:0:0/1:36 | |
| 11508 chr10 135160467 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 11509 chr10 135165790 . A G 99 . DP=21;AF1=1;CI95=1,1;DP4=0,0,7,11;MQ=46 PL:DP:SP:GT:GQ 255,54,0:18:0:1/1:99 | |
| 11510 chr10 135166323 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 11511 chr10 135173161 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11512 chr10 135179458 . G C 94 . DP=41;AF1=0.5;CI95=0.5,0.5;DP4=17,9,4,6;MQ=49;PV4=0.26,2.8e-05,2e-06,0.17 PL:DP:SP:GT:GQ 124,0,255:36:6:0/1:99 | |
| 11513 chr10 135180430 . A G 15.1 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=7,1,3,1;MQ=49;PV4=1,0.0031,0.015,0.46 PL:DP:SP:GT:GQ 45,0,200:12:0:0/1:48 | |
| 11514 chr10 135182345 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 11515 chr10 135183343 . G T 7.8 . DP=11;AF1=0.5;CI95=0.5,0.5;DP4=2,0,4,0;MQ=49;PV4=1,0.0011,0.18,1 PL:DP:SP:GT:GQ 37,0,46:6:0:0/1:39 | |
| 11516 chr10 135184342 . C T 23.8 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=44 PL:DP:SP:GT:GQ 55,6,0:2:0:1/1:49 | |
| 11517 chr10 135201899 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11518 chr10 135202594 . T C 10.4 . DP=21;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=50 PL:DP:SP:GT:GQ 42,9,0:3:0:1/1:63 | |
| 11519 chr10 135209319 . A ATTTGTTGC 3.25 . INDEL;DP=6;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,1;MQ=50;PV4=1,0.015,1,0.04 PL:DP:SP:GT:GQ 38,0,114:4:0:0/1:41 | |
| 11520 chr10 135211892 . A G 3.55 . DP=5;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11521 chr10 135211980 . C G 20 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=6,2,0,4;MQ=48;PV4=0.061,0.12,0.00087,0.13 PL:DP:SP:GT:GQ 50,0,176:12:12:0/1:53 | |
| 11522 chr10 135212997 . C G 15.1 . DP=23;AF1=0.5;CI95=0.5,0.5;DP4=4,0,6,0;MQ=50;PV4=1,0.0016,0.12,1 PL:DP:SP:GT:GQ 45,0,71:10:0:0/1:48 | |
| 11523 chr10 135233541 . A G 99 . DP=30;AF1=1;CI95=0.5,1;DP4=1,1,3,14;MQ=47;PV4=0.39,1,0.19,1 PL:DP:SP:GT:GQ 185,8,0:19:4:1/1:56 | |
| 11524 chr10 135234806 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 11525 chr10 135234864 . A T 4.13 . DP=2;AF1=0.5006;CI95=0.5,0.5;DP4=1,0,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,25:2:0:0/1:27 | |
| 11526 chr10 135253828 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11527 chr10 135270202 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11528 chr10 135294277 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11529 chr10 135338427 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11530 chr10 135347397 . T C 86 . DP=30;AF1=1;CI95=1,1;DP4=0,0,1,7;MQ=48 PL:DP:SP:GT:GQ 119,24,0:8:0:1/1:96 | |
| 11531 chr10 135368211 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11532 chr10 135368835 . C T 99 . DP=30;AF1=0.5;CI95=0.5,0.5;DP4=9,0,19,1;MQ=48;PV4=1,2.7e-12,7.5e-06,1 PL:DP:SP:GT:GQ 154,0,179:29:0:0/1:99 | |
| 11533 chr10 135370407 . GCA GCACA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11534 chr10 135371606 . T C 4.13 . DP=8;AF1=0.4998;CI95=0.5,0.5;DP4=4,1,3,0;MQ=50;PV4=1,0.0008,0.11,1 PL:DP:SP:GT:GQ 32,0,175:8:0:0/1:35 | |
| 11535 chr10 135371835 . ACCC ACCCC 6.55 . INDEL;DP=10;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,2;MQ=50;PV4=1,1,1,0.31 PL:DP:SP:GT:GQ 43,0,73:6:0:0/1:46 | |
| 11536 chr10 135377839 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11537 chr10 135429358 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11538 chr10 135433160 . T G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 11539 chr10 135501597 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 11540 chr11 72953 . A T 30 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=60 PL:DP:SP:GT:GQ 60,3,0:1:0:1/1:41 | |
| 11541 chr11 177428 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11542 chr11 193054 . T G 3.41 . DP=10;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 32,6,0:2:0:1/1:49 | |
| 11543 chr11 193058 . A G,C 8.44 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=47 PL:DP:SP:GT:GQ 50,17,38,11,0,38:3:0:1/1:49 | |
| 11544 chr11 193194 . T C 20 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=0,7,0,3;MQ=49;PV4=1,0.052,0.0012,1 PL:DP:SP:GT:GQ 50,0,171:10:0:0/1:53 | |
| 11545 chr11 193944 . G C 10.4 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=0,7,0,2;MQ=48;PV4=1,0.31,0.00011,0.21 PL:DP:SP:GT:GQ 40,0,159:9:0:0/1:43 | |
| 11546 chr11 194032 . G A 10.4 . DP=3;AF1=0.5001;CI95=0.5,0.5;DP4=1,0,0,2;MQ=48;PV4=0.33,0.2,0.33,1 PL:DP:SP:GT:GQ 40,0,34:3:0:0/1:36 | |
| 11547 chr11 195474 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11548 chr11 203093 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 11549 chr11 205127 . A C 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11550 chr11 205690 . AGGG AGG 99 . INDEL;DP=27;AF1=0.5;CI95=0.5,0.5;DP4=0,9,1,12;MQ=50;PV4=1,2.2e-11,1,1 PL:DP:SP:GT:GQ 146,0,114:22:0:0/1:99 | |
| 11551 chr11 205757 . AACTCTG A 70.5 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=0,2,1,2;MQ=50;PV4=1,0.5,1,1 PL:DP:SP:GT:GQ 108,0,47:5:0:0/1:50 | |
| 11552 chr11 211885 . AGC A 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 11553 chr11 216273 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11554 chr11 218811 . G A 4.77 . DP=36;AF1=0.4999;CI95=0.5,0.5;DP4=16,0,5,1;MQ=50;PV4=0.27,1.7e-06,0.033,0.019 PL:DP:SP:GT:GQ 33,0,233:22:0:0/1:36 | |
| 11555 chr11 221614 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11556 chr11 237087 . A G 7.87 . DP=9;AF1=0.5101;CI95=0.5,0.5;DP4=0,1,0,2;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,14:3:0:0/1:17 | |
| 11557 chr11 243211 . A G 4.61 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 34,6,0:2:0:1/1:49 | |
| 11558 chr11 243987 . G A 99 . DP=15;AF1=0.9966;CI95=0.5,1;DP4=1,0,6,0;MQ=44;PV4=1,1,0,1 PL:DP:SP:GT:GQ 137,1,0:7:0:1/1:23 | |
| 11559 chr11 244115 . G A 99 . DP=14;AF1=1;CI95=1,1;DP4=0,0,5,8;MQ=46 PL:DP:SP:GT:GQ 201,39,0:13:0:1/1:99 | |
| 11560 chr11 244129 . C T 71.2 . DP=9;AF1=0.5263;CI95=0.5,1;DP4=1,0,4,1;MQ=45;PV4=1,1,0.17,1 PL:DP:SP:GT:GQ 101,0,10:6:0:0/1:13 | |
| 11561 chr11 244171 . T C 29 . DP=17;AF1=1;CI95=0.5,1;DP4=0,0,1,2;MQ=41 PL:DP:SP:GT:GQ 61,9,0:3:0:1/1:63 | |
| 11562 chr11 244197 . T C 99 . DP=13;AF1=1;CI95=1,1;DP4=0,0,4,8;MQ=45 PL:DP:SP:GT:GQ 216,36,0:12:0:1/1:99 | |
| 11563 chr11 244490 . ATACCTTTTAGTACCTTTTAG ATACCTTTTAG 99 . INDEL;DP=37;AF1=0.5001;CI95=0.5,0.5;DP4=2,1,1,20;MQ=50;PV4=0.032,1,1,1 PL:DP:SP:GT:GQ 255,0,34:24:15:0/1:37 | |
| 11564 chr11 244498 . TAG TAGAG 3.25 . INDEL;DP=10;AF1=0.5;CI95=0.5,0.5;DP4=2,1,0,1;MQ=50;PV4=1,1,1,0.45 PL:DP:SP:GT:GQ 38,0,89:4:0:0/1:41 | |
| 11565 chr11 244500 . G GAG 3.25 . INDEL;DP=11;AF1=0.5;CI95=0.5,0.5;DP4=2,1,0,1;MQ=50;PV4=1,1,1,0.22 PL:DP:SP:GT:GQ 38,0,89:4:0:0/1:41 | |
| 11566 chr11 244552 . A G 4.13 . DP=17;AF1=0.5005;CI95=0.5,0.5;DP4=0,1,0,2;MQ=49;PV4=1,0.083,0.33,1 PL:DP:SP:GT:GQ 32,0,26:3:0:0/1:28 | |
| 11567 chr11 253808 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 11568 chr11 257230 . G A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 11569 chr11 260099 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 11570 chr11 260966 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11571 chr11 267778 . C G 8.44 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 39,6,0:2:0:1/1:49 | |
| 11572 chr11 279798 . G A 33 . DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,1;MQ=44;PV4=1,0.16,0.14,1 PL:DP:SP:GT:GQ 63,0,41:3:0:0/1:44 | |
| 11573 chr11 284463 . G GACGACA 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=49 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 11574 chr11 285426 . GCA GCACA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,38:2:0:0/1:40 | |
| 11575 chr11 285856 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11576 chr11 285886 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11577 chr11 289626 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11578 chr11 293001 . AGG AGGG 91.7 . INDEL;DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=50 PL:DP:SP:GT:GQ 132,15,0:5:0:1/1:75 | |
| 11579 chr11 298632 . C T 7.8 . DP=7;AF1=0.5;CI95=0.5,0.5;DP4=1,2,3,0;MQ=48;PV4=0.4,0.11,1,0.27 PL:DP:SP:GT:GQ 37,0,81:6:4:0/1:40 | |
| 11580 chr11 308332 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11581 chr11 309200 . C T 4.13 . DP=6;AF1=0.4999;CI95=0.5,0.5;DP4=0,2,0,2;MQ=48;PV4=1,0.42,0.15,1 PL:DP:SP:GT:GQ 32,0,39:4:0:0/1:34 | |
| 11582 chr11 314204 . G T 4.77 . DP=26;AF1=0.4999;CI95=0.5,0.5;DP4=2,2,0,3;MQ=49;PV4=0.43,1,0.12,1 PL:DP:SP:GT:GQ 33,0,51:7:4:0/1:36 | |
| 11583 chr11 314207 . C G 3.66 . DP=26;AF1=0.5261;CI95=0.5,1;DP4=1,0,0,2;MQ=49;PV4=0.33,1,0.17,1 PL:DP:SP:GT:GQ 31,0,10:3:0:0/1:13 | |
| 11584 chr11 326922 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11585 chr11 330555 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 11586 chr11 359754 . T C 6.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 11587 chr11 371627 . T TGTG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 11588 chr11 373427 . C CAAAA 7.42 . INDEL;DP=9;AF1=0.5101;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,14:2:0:0/1:17 | |
| 11589 chr11 374262 . C CGGGTTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11590 chr11 381731 . A T 6.2 . DP=9;AF1=0.4999;CI95=0.5,0.5;DP4=1,3,0,2;MQ=48;PV4=1,0.0092,1.5e-05,0.24 PL:DP:SP:GT:GQ 35,0,152:6:0:0/1:38 | |
| 11591 chr11 386509 . g gAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11592 chr11 396024 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 11593 chr11 396701 . C T 32 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,4;MQ=48;PV4=1,0.01,0.0053,0.38 PL:DP:SP:GT:GQ 62,0,57:6:0:0/1:59 | |
| 11594 chr11 398833 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 11595 chr11 399237 . G A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 11596 chr11 400109 . A G 40 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,1,2;MQ=46 PL:DP:SP:GT:GQ 72,9,0:3:0:1/1:63 | |
| 11597 chr11 409385 . C G 11.1 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 42,6,0:2:0:1/1:49 | |
| 11598 chr11 420718 . T A 7.8 . DP=4;AF1=0.5002;CI95=0.5,0.5;DP4=1,0,2,0;MQ=48;PV4=1,0.13,0.26,0.02 PL:DP:SP:GT:GQ 37,0,30:3:0:0/1:32 | |
| 11599 chr11 421006 . G A 6.79 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 37,6,0:2:0:1/1:49 | |
| 11600 chr11 421360 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11601 chr11 428014 . G GCC 22.2 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 61,6,0:2:0:1/1:49 | |
| 11602 chr11 428385 . A G 99 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,1,5;MQ=46 PL:DP:SP:GT:GQ 134,18,0:6:0:1/1:90 | |
| 11603 chr11 429659 . C T 4.77 . DP=4;AF1=0.4999;CI95=0.5,0.5;DP4=0,2,1,0;MQ=47;PV4=0.33,1,0.042,1 PL:DP:SP:GT:GQ 33,0,53:3:0:0/1:36 | |
| 11604 chr11 433387 . A G 3.98 . DP=10;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=50 PL:DP:SP:GT:GQ 33,6,0:2:0:1/1:49 | |
| 11605 chr11 433532 . C G 7.59 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 38,6,0:2:0:1/1:49 | |
| 11606 chr11 451941 . CCTGCCACG C 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 11607 chr11 455035 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 11608 chr11 455491 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11609 chr11 460303 . T C 8.64 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=1,7,1,4;MQ=50;PV4=1,0.005,0.11,0.16 PL:DP:SP:GT:GQ 38,0,169:13:0:0/1:41 | |
| 11610 chr11 497613 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11611 chr11 497909 . T A 9.53 . DP=13;AF1=0.5006;CI95=0.5,0.5;DP4=1,0,2,0;MQ=46;PV4=1,0.21,0.23,1 PL:DP:SP:GT:GQ 39,0,26:3:0:0/1:29 | |
| 11612 chr11 505767 . gcc g 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 11613 chr11 532803 . G A 99 . DP=10;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,7;MQ=45;PV4=1,1,0,0.27 PL:DP:SP:GT:GQ 157,0,79:10:0:0/1:82 | |
| 11614 chr11 546720 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 11615 chr11 549959 . C T 27 . DP=16;AF1=0.5003;CI95=0.5,0.5;DP4=1,1,2,3;MQ=50;PV4=1,0.12,1,1 PL:DP:SP:GT:GQ 57,0,29:7:0:0/1:32 | |
| 11616 chr11 554214 . G C 75 . DP=12;AF1=1;CI95=1,1;DP4=0,0,8,1;MQ=49 PL:DP:SP:GT:GQ 108,27,0:9:0:1/1:99 | |
| 11617 chr11 569868 . G GGCCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11618 chr11 580596 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11619 chr11 612967 . A G 18.1 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=8,1,1,3;MQ=49;PV4=0.052,2e-05,0.00045,0.12 PL:DP:SP:GT:GQ 48,0,238:13:13:0/1:51 | |
| 11620 chr11 617537 . C T 45 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,6;MQ=48;PV4=1,0.079,0.18,1 PL:DP:SP:GT:GQ 75,0,60:9:0:0/1:63 | |
| 11621 chr11 617967 . C G 20.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47 PL:DP:SP:GT:GQ 52,6,0:2:0:1/1:49 | |
| 11622 chr11 618172 . A G 69 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=0,8,0,7;MQ=48;PV4=1,0.0023,2.1e-05,1 PL:DP:SP:GT:GQ 99,0,182:15:0:0/1:99 | |
| 11623 chr11 618899 . C A,T 3.6 . DP=7;AF1=0.5127;CI95=0.5,0.5;DP4=1,0,0,4;MQ=49;PV4=0.2,0.3,0.15,0.042 PL:DP:SP:GT:GQ 38,7,19,20,0,37:5:0:0/1:16 | |
| 11624 chr11 619671 . C T 28 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=10,1,4,1;MQ=49;PV4=1,0.001,0.00039,0.43 PL:DP:SP:GT:GQ 58,0,247:16:0:0/1:61 | |
| 11625 chr11 621490 . CTT CT 65.5 . INDEL;DP=15;AF1=0.5;CI95=0.5,0.5;DP4=1,6,1,5;MQ=50;PV4=1,1.5e-05,1,0.47 PL:DP:SP:GT:GQ 103,0,155:13:0:0/1:99 | |
| 11626 chr11 622849 . a aATGGAGG 7.35 . INDEL;DP=3;AF1=0.5008;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,25:2:0:0/1:28 | |
| 11627 chr11 623396 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11628 chr11 624674 . C T 79 . DP=40;AF1=0.5;CI95=0.5,0.5;DP4=10,6,9,8;MQ=49;PV4=0.73,4.5e-07,7.7e-06,1 PL:DP:SP:GT:GQ 109,0,255:33:1:0/1:99 | |
| 11629 chr11 644330 . AAA AAATTGGGCCCAA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 11630 chr11 644683 . A T 4.77 . DP=4;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,2;MQ=47;PV4=1,0.061,0.13,1 PL:DP:SP:GT:GQ 33,0,36:3:0:0/1:34 | |
| 11631 chr11 649751 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 11632 chr11 654091 . G A 8.64 . DP=6;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,2;MQ=48;PV4=1,0.0063,0.031,0.27 PL:DP:SP:GT:GQ 38,0,134:6:0:0/1:41 | |
| 11633 chr11 662766 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 11634 chr11 665192 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11635 chr11 666519 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11636 chr11 669218 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11637 chr11 674454 . G T 30.3 . DP=22;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=47 PL:DP:SP:GT:GQ 63,15,0:5:0:1/1:75 | |
| 11638 chr11 674458 . G A 88 . DP=23;AF1=0.5;CI95=0.5,0.5;DP4=10,0,10,0;MQ=48;PV4=1,1.4e-05,0.00056,1 PL:DP:SP:GT:GQ 118,0,202:20:0:0/1:99 | |
| 11639 chr11 677019 . ca c 11.5 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=50 PL:DP:SP:GT:GQ 50,6,0:2:0:1/1:49 | |
| 11640 chr11 678409 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11641 chr11 686798 . G A 50 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=9,0,8,0;MQ=49;PV4=1,1.5e-05,0.00051,1 PL:DP:SP:GT:GQ 80,0,196:17:0:0/1:83 | |
| 11642 chr11 686839 . G A 5.46 . DP=25;AF1=0.4999;CI95=0.5,0.5;DP4=3,6,4,1;MQ=50;PV4=0.27,1.4e-05,1,1 PL:DP:SP:GT:GQ 34,0,255:14:6:0/1:37 | |
| 11643 chr11 688217 . A G 32.5 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=49 PL:DP:SP:GT:GQ 65,12,0:4:0:1/1:72 | |
| 11644 chr11 688536 . CCTC CCTCTC 8.19 . INDEL;DP=9;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 11645 chr11 688537 . CT CTGAT 7.46 . INDEL;DP=10;AF1=0.5163;CI95=0.5,1;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,12:2:0:0/1:15 | |
| 11646 chr11 698753 . A G 5.46 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,44:2:0:0/1:37 | |
| 11647 chr11 701269 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 11648 chr11 703497 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 11649 chr11 709680 . T C 21.5 . DP=10;AF1=0.8277;CI95=0.5,1;DP4=0,1,0,4;MQ=49;PV4=1,1,0.26,1 PL:DP:SP:GT:GQ 50,0,1:5:0:1/1:5 | |
| 11650 chr11 710558 . G A 99 . DP=14;AF1=1;CI95=1,1;DP4=0,0,1,10;MQ=45 PL:DP:SP:GT:GQ 222,33,0:11:0:1/1:99 | |
| 11651 chr11 720677 . G C 11.3 . DP=5;AF1=0.5;CI95=0.5,0.5;DP4=1,1,0,2;MQ=47;PV4=1,0.073,0.0029,0.039 PL:DP:SP:GT:GQ 41,0,65:4:0:0/1:44 | |
| 11652 chr11 721609 . C A 4.77 . DP=11;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,2,0;MQ=47;PV4=0.33,0.024,0.39,1 PL:DP:SP:GT:GQ 33,0,37:3:0:0/1:35 | |
| 11653 chr11 721611 . G A 7.59 . DP=10;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 38,6,0:2:0:1/1:49 | |
| 11654 chr11 721627 . C G 3.01 . DP=9;AF1=0.5001;CI95=0.5,0.5;DP4=2,0,0,2;MQ=47;PV4=0.33,1,1,1 PL:DP:SP:GT:GQ 30,0,29:4:5:0/1:29 | |
| 11655 chr11 774157 . A AAC 5.08 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,67:3:0:0/1:44 | |
| 11656 chr11 781883 . GGCC GGCCAACTGCC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 11657 chr11 786349 . A T 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 11658 chr11 792579 . G A 4.91 . DP=3;AF1=0.5262;CI95=0.5,1;DP4=0,1,1,1;MQ=49;PV4=1,1,0.33,1 PL:DP:SP:GT:GQ 33,0,10:3:0:0/1:13 | |
| 11659 chr11 801631 . TGGGGG TGGGGGG 27.7 . INDEL;DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=50 PL:DP:SP:GT:GQ 68,15,0:5:0:1/1:75 | |
| 11660 chr11 802666 . CT CTTGT 7.52 . INDEL;DP=4;AF1=0.5263;CI95=0.5,1;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,10:2:0:0/1:13 | |
| 11661 chr11 807143 . G C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 11662 chr11 811978 . TTCT TTCTCT 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,1,1,0.23 PL:DP:SP:GT:GQ 41,0,64:3:0:0/1:44 | |
| 11663 chr11 812535 . G GCAGCAA 7.35 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 11664 chr11 812983 . TTCT TTCTCTCT 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11665 chr11 813980 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 11666 chr11 823901 . aagagagagag aagagagag 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 11667 chr11 826100 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11668 chr11 828784 . A G 95.3 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,1,4;MQ=46 PL:DP:SP:GT:GQ 128,15,0:5:0:1/1:75 | |
| 11669 chr11 831054 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11670 chr11 836023 . C T,A 43.3 . DP=12;AF1=1;CI95=0.5,1;DP4=0,0,6,0;MQ=48 PL:DP:SP:GT:GQ 84,23,69,8,0,69:6:0:1/1:75 | |
| 11671 chr11 836227 . A G 40 . DP=19;AF1=1;CI95=0.5,1;DP4=0,0,1,2;MQ=47 PL:DP:SP:GT:GQ 72,9,0:3:0:1/1:63 | |
| 11672 chr11 838110 . C T 81 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=6,0,12,0;MQ=48;PV4=1,1.3e-07,0.0085,1 PL:DP:SP:GT:GQ 111,0,151:18:0:0/1:99 | |
| 11673 chr11 838532 . G GGAAC 7.37 . INDEL;DP=2;AF1=0.5025;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,20:2:0:0/1:23 | |
| 11674 chr11 839155 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11675 chr11 840319 . C T 65 . DP=5;AF1=0.5;CI95=0.5,0.5;DP4=2,0,3,0;MQ=46;PV4=1,1,0.00029,1 PL:DP:SP:GT:GQ 95,0,59:5:0:0/1:62 | |
| 11676 chr11 847499 . C CGGACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11677 chr11 850317 . TG TGAGG 7.44 . INDEL;DP=3;AF1=0.5128;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,13:2:0:0/1:16 | |
| 11678 chr11 851514 . A T 4.77 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11679 chr11 860920 . C T 13.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 45,6,0:2:0:1/1:49 | |
| 11680 chr11 862136 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11681 chr11 866498 . T C 19 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=49 PL:DP:SP:GT:GQ 51,9,0:3:0:1/1:63 | |
| 11682 chr11 870446 . G A 23.8 . DP=10;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=46 PL:DP:SP:GT:GQ 55,6,0:2:0:1/1:49 | |
| 11683 chr11 887383 . T TCTGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11684 chr11 888069 . C A 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11685 chr11 889996 . G A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 11686 chr11 891778 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11687 chr11 902381 . C G 17.1 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=1,1,0,3;MQ=47;PV4=0.4,0.32,0.19,1 PL:DP:SP:GT:GQ 47,0,42:5:0:0/1:44 | |
| 11688 chr11 903070 . G C 70 . DP=49;AF1=1;CI95=1,1;DP4=0,0,3,5;MQ=50 PL:DP:SP:GT:GQ 103,24,0:8:0:1/1:96 | |
| 11689 chr11 905814 . gcaa gCAAATcaa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11690 chr11 909610 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11691 chr11 922687 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11692 chr11 932659 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 11693 chr11 937906 . cg cGTTGAg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11694 chr11 949303 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11695 chr11 959906 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 11696 chr11 981196 . A T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 11697 chr11 987995 . C CTGACAGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11698 chr11 991530 . C T 4.77 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,32:2:0:0/1:32 | |
| 11699 chr11 992770 . GAG GAGACAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11700 chr11 993745 . C G 13 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 44,6,0:2:0:1/1:49 | |
| 11701 chr11 1002170 . CC CCAGTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11702 chr11 1015665 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11703 chr11 1017431 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 11704 chr11 1033243 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11705 chr11 1054566 . T C 19.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 51,6,0:2:0:1/1:49 | |
| 11706 chr11 1089171 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 11707 chr11 1093357 . A T 3.15 . DP=2;AF1=0.5333;CI95=0.5,1;DP4=0,1,0,1;MQ=32;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,9:2:0:0/1:12 | |
| 11708 chr11 1096191 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11709 chr11 1096829 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 11710 chr11 1100905 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 11711 chr11 1105250 . tgag tg 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 11712 chr11 1151377 . T TAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11713 chr11 1255624 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11714 chr11 1257935 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11715 chr11 1263560 . C A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 11716 chr11 1273105 . T G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 11717 chr11 1282750 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11718 chr11 1288622 . A AATACGACT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11719 chr11 1295404 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11720 chr11 1295461 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 11721 chr11 1297863 . CT CTACGGAGAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11722 chr11 1299934 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 11723 chr11 1312207 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11724 chr11 1319684 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 11725 chr11 1393709 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 11726 chr11 1423589 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11727 chr11 1424173 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11728 chr11 1424199 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11729 chr11 1429616 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 11730 chr11 1430332 . C CGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11731 chr11 1432198 . AGGG A 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 11732 chr11 1434950 . CC CCCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11733 chr11 1440922 . t tCCACGTGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11734 chr11 1458242 . TT TTTCCT 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11735 chr11 1462162 . AGG AG 13.4 . INDEL;DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=50 PL:DP:SP:GT:GQ 52,6,0:2:0:1/1:49 | |
| 11736 chr11 1472586 . A G 3.54 . DP=4;AF1=0.4998;CI95=0.5,0.5;DP4=3,0,1,0;MQ=48;PV4=1,0.3,0,1 PL:DP:SP:GT:GQ 31,0,105:4:0:0/1:34 | |
| 11737 chr11 1478990 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 11738 chr11 1493695 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11739 chr11 1495250 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 11740 chr11 1520045 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11741 chr11 1522635 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 11742 chr11 1526240 . GA GAA 30.2 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=50 PL:DP:SP:GT:GQ 69,6,0:2:0:1/1:49 | |
| 11743 chr11 1531793 . G GTCGAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11744 chr11 1535571 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11745 chr11 1537438 . C CCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11746 chr11 1551632 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11747 chr11 1563352 . caa cAAaa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11748 chr11 1565856 . GGA G 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 11749 chr11 1575764 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11750 chr11 1590273 . TG TGGGGGGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11751 chr11 1619740 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 11752 chr11 1625731 . C CTT 7.36 . INDEL;DP=2;AF1=0.501;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,24:2:0:0/1:27 | |
| 11753 chr11 1628844 . A G 12 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 43,6,0:2:0:1/1:49 | |
| 11754 chr11 1629542 . C CTCTATCTGCTCGT 99 . INDEL;DP=16;AF1=1;CI95=1,1;DP4=0,0,8,5;MQ=39 PL:DP:SP:GT:GQ 172,39,0:13:0:1/1:99 | |
| 11755 chr11 1651830 . G T 42.3 . DP=36;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=49 PL:DP:SP:GT:GQ 75,15,0:5:0:1/1:75 | |
| 11756 chr11 1658876 . a aCT 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 11757 chr11 1661920 . C A 11.1 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 42,6,0:2:0:1/1:49 | |
| 11758 chr11 1674011 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11759 chr11 1686609 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 11760 chr11 1689325 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11761 chr11 1691519 . A G 6.98 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,44:2:0:0/1:38 | |
| 11762 chr11 1710052 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11763 chr11 1710419 . C CTGGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11764 chr11 1719208 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11765 chr11 1729391 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11766 chr11 1749246 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 11767 chr11 1749369 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11768 chr11 1752273 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11769 chr11 1752301 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11770 chr11 1756382 . CAG CAGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11771 chr11 1757686 . AA AAGA 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 11772 chr11 1774124 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11773 chr11 1781289 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 11774 chr11 1799693 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11775 chr11 1807656 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11776 chr11 1822749 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11777 chr11 1824607 . T C 4.13 . DP=7;AF1=0.4999;CI95=0.5,0.5;DP4=1,1,2,0;MQ=38;PV4=1,0.24,1,0.015 PL:DP:SP:GT:GQ 32,0,38:4:0:0/1:34 | |
| 11778 chr11 1825231 . G A 13.9 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 45,6,0:2:0:1/1:49 | |
| 11779 chr11 1835442 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11780 chr11 1840709 . gt gTAATAGGCt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11781 chr11 1854886 . A G 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 11782 chr11 1857173 . T C 99 . DP=44;AF1=0.5;CI95=0.5,0.5;DP4=11,9,11,12;MQ=49;PV4=0.76,1.1e-09,0.00053,1 PL:DP:SP:GT:GQ 188,0,255:43:1:0/1:99 | |
| 11783 chr11 1858037 . G GTTACGC 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=49 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 11784 chr11 1867307 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11785 chr11 1891123 . C T 5.46 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,44:2:0:0/1:37 | |
| 11786 chr11 1891948 . G A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 11787 chr11 1901467 . A C 7.59 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 38,6,0:2:0:1/1:49 | |
| 11788 chr11 1902529 . AGCC A 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 11789 chr11 1902635 . G T 10.4 . DP=5;AF1=0.5;CI95=0.5,0.5;DP4=2,0,2,0;MQ=48;PV4=1,0.061,0.044,1 PL:DP:SP:GT:GQ 40,0,73:4:0:0/1:43 | |
| 11790 chr11 1927456 . T A 12.3 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 11791 chr11 1936729 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11792 chr11 1936744 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11793 chr11 1937485 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11794 chr11 1940514 . C G 6.98 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,34:2:0:0/1:35 | |
| 11795 chr11 1944050 . cctctctctctctctctctct cCTctctctctctctctctctct 3.8 . INDEL;DP=20;AF1=0.5;CI95=0.5,0.5;DP4=7,0,3,0;MQ=45;PV4=1,1,0.00046,0.27 PL:DP:SP:GT:GQ 39,0,148:10:0:0/1:42 | |
| 11796 chr11 1944202 . A G 99 . DP=35;AF1=1;CI95=1,1;DP4=0,0,7,22;MQ=47 PL:DP:SP:GT:GQ 255,87,0:29:0:1/1:99 | |
| 11797 chr11 1947160 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 11798 chr11 1947495 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 11799 chr11 1947793 . C T 19.1 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,9;MQ=49;PV4=1,4.6e-11,1,0.42 PL:DP:SP:GT:GQ 49,0,116:13:0:0/1:52 | |
| 11800 chr11 1948053 . G A 13.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 11801 chr11 1950302 . A G 80 . DP=16;AF1=1;CI95=1,1;DP4=0,0,12,0;MQ=49 PL:DP:SP:GT:GQ 113,36,0:12:0:1/1:99 | |
| 11802 chr11 1950925 . T C 21.8 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 53,6,0:2:0:1/1:49 | |
| 11803 chr11 1951410 . GGAAGGAG GG 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 11804 chr11 1960943 . aa aAGGACa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11805 chr11 1961011 . A T 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11806 chr11 1970369 . C T 19.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 51,6,0:2:0:1/1:49 | |
| 11807 chr11 1972351 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 11808 chr11 1975765 . TGGCGG TGGCGGCGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11809 chr11 1977552 . G T 13.2 . DP=20;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,4;MQ=50;PV4=1,0.015,1,1 PL:DP:SP:GT:GQ 43,0,71:7:0:0/1:46 | |
| 11810 chr11 1977557 . C T 11.3 . DP=21;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,4;MQ=48;PV4=1,1,0.018,1 PL:DP:SP:GT:GQ 41,0,43:7:0:0/1:42 | |
| 11811 chr11 1993914 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11812 chr11 2002455 . C G 7.81 . DP=2;AF1=0.5025;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,20:2:0:0/1:23 | |
| 11813 chr11 2005818 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11814 chr11 2016472 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11815 chr11 2016477 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11816 chr11 2019749 . C CCAAAGCG 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 11817 chr11 2028593 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11818 chr11 2032901 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11819 chr11 2054464 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11820 chr11 2079489 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11821 chr11 2080564 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11822 chr11 2087623 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11823 chr11 2094670 . t tTCGAGTTTTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11824 chr11 2097285 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11825 chr11 2107742 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 11826 chr11 2110824 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11827 chr11 2114124 . AGGG AG 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 11828 chr11 2114577 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11829 chr11 2116938 . A G 13.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 11830 chr11 2118207 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11831 chr11 2127767 . a aCT 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 11832 chr11 2128303 . tagag t 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11833 chr11 2130286 . C A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 11834 chr11 2137426 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 11835 chr11 2154188 . G A 3.54 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,32:2:0:0/1:31 | |
| 11836 chr11 2155437 . C CCCAGTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11837 chr11 2159285 . GG GGCAACG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11838 chr11 2194686 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 11839 chr11 2197467 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 11840 chr11 2199394 . A G 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11841 chr11 2239273 . A T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 11842 chr11 2246460 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11843 chr11 2250276 . A ATCAGATCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11844 chr11 2256094 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11845 chr11 2287410 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11846 chr11 2302257 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 11847 chr11 2308844 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11848 chr11 2319355 . C T 3.02 . DP=2;AF1=0.5017;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,21:2:0:0/1:23 | |
| 11849 chr11 2331550 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 11850 chr11 2334768 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11851 chr11 2337097 . AGGTG AGGTGTCTGGGTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11852 chr11 2338344 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 11853 chr11 2356745 . C G 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11854 chr11 2358385 . ga gACACAATGCa 7.62 . INDEL;DP=9;AF1=0.543;CI95=0.5,1;DP4=0,1,0,1;MQ=37;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,8:2:0:0/1:11 | |
| 11855 chr11 2374363 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11856 chr11 2380731 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11857 chr11 2386281 . g gTCCTCTTAGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11858 chr11 2415292 . T C 42 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=5,1,7,0;MQ=49;PV4=0.46,1.8e-05,0.19,1 PL:DP:SP:GT:GQ 72,0,189:13:0:0/1:75 | |
| 11859 chr11 2420440 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11860 chr11 2427211 . G A 45 . DP=29;AF1=0.5;CI95=0.5,0.5;DP4=13,0,14,0;MQ=49;PV4=1,1.3e-18,7.8e-06,0.31 PL:DP:SP:GT:GQ 75,0,225:27:0:0/1:78 | |
| 11861 chr11 2427291 . A C 10.5 . DP=38;AF1=0.5163;CI95=0.5,1;DP4=1,0,3,0;MQ=49;PV4=1,0.26,0.26,1 PL:DP:SP:GT:GQ 40,0,12:4:0:0/1:15 | |
| 11862 chr11 2429617 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 11863 chr11 2434704 . A T 8.64 . DP=3;AF1=0.5;CI95=0.5,0.5;DP4=1,0,2,0;MQ=48;PV4=1,0.057,0.27,1 PL:DP:SP:GT:GQ 38,0,41:3:0:0/1:39 | |
| 11864 chr11 2437096 . T A 6.79 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 37,6,0:2:0:1/1:49 | |
| 11865 chr11 2439001 . C T 3.54 . DP=9;AF1=0.4998;CI95=0.5,0.5;DP4=3,0,0,2;MQ=49;PV4=0.1,0.14,0.056,0.38 PL:DP:SP:GT:GQ 31,0,81:5:10:0/1:34 | |
| 11866 chr11 2439542 . A G 75 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=43 PL:DP:SP:GT:GQ 107,9,0:3:0:1/1:63 | |
| 11867 chr11 2441115 . C T 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,38:2:0:0/1:32 | |
| 11868 chr11 2441686 . TGG TGGG 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 11869 chr11 2451921 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11870 chr11 2458622 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11871 chr11 2471529 . G T 5.46 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,44:2:0:0/1:37 | |
| 11872 chr11 2473306 . ACGGC AC 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 11873 chr11 2479643 . gaact g 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 11874 chr11 2482833 . G A 3.54 . DP=4;AF1=0.4998;CI95=0.5,0.5;DP4=3,0,1,0;MQ=48;PV4=1,1,0,0.45 PL:DP:SP:GT:GQ 31,0,100:4:0:0/1:34 | |
| 11875 chr11 2489588 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11876 chr11 2493138 . G GAATTAGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11877 chr11 2493568 . C G 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11878 chr11 2494320 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11879 chr11 2530116 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11880 chr11 2534870 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 11881 chr11 2547934 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11882 chr11 2549141 . G A 86 . DP=32;AF1=0.5;CI95=0.5,0.5;DP4=14,0,11,1;MQ=48;PV4=0.46,0.0006,0.012,1 PL:DP:SP:GT:GQ 116,0,211:26:0:0/1:99 | |
| 11883 chr11 2549329 . TGGGGGG TGGGG 21.3 . INDEL;DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=50 PL:DP:SP:GT:GQ 60,6,0:2:0:1/1:49 | |
| 11884 chr11 2550755 . G C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 11885 chr11 2551199 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11886 chr11 2554605 . T A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 11887 chr11 2562683 . C A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 11888 chr11 2591848 . G A 6.2 . DP=12;AF1=0.4999;CI95=0.5,0.5;DP4=3,4,2,1;MQ=49;PV4=1,0.00016,1.6e-05,0.038 PL:DP:SP:GT:GQ 35,0,244:10:0:0/1:38 | |
| 11889 chr11 2608295 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 11890 chr11 2609934 . T C 7.59 . DP=11;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 38,6,0:2:0:1/1:49 | |
| 11891 chr11 2610140 . T C 4.13 . DP=10;AF1=0.4999;CI95=0.5,0.5;DP4=0,2,0,3;MQ=49;PV4=1,0.15,0.25,1 PL:DP:SP:GT:GQ 32,0,35:5:0:0/1:33 | |
| 11892 chr11 2610140 . TT TTCT 4.42 . INDEL;DP=10;AF1=0.5001;CI95=0.5,0.5;DP4=0,2,0,2;MQ=50;PV4=1,1,1,0.02 PL:DP:SP:GT:GQ 40,0,32:4:0:0/1:34 | |
| 11893 chr11 2639732 . t tC 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 11894 chr11 2646591 . T G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 11895 chr11 2651602 . C G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 11896 chr11 2662851 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11897 chr11 2664542 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11898 chr11 2688098 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11899 chr11 2698503 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11900 chr11 2703030 . T TCGATGAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11901 chr11 2706351 . T C 12.3 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 11902 chr11 2707920 . CC CCATGAGAGATGC 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11903 chr11 2713255 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11904 chr11 2716574 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11905 chr11 2743637 . ct cTCTCAGAt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11906 chr11 2747462 . G A 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 11907 chr11 2747970 . AT ATCTGT 7.36 . INDEL;DP=2;AF1=0.501;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,24:2:0:0/1:27 | |
| 11908 chr11 2748436 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11909 chr11 2752764 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11910 chr11 2754418 . T G 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11911 chr11 2761348 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11912 chr11 2769921 . C A 43.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=43 PL:DP:SP:GT:GQ 75,6,0:2:0:1/1:49 | |
| 11913 chr11 2787569 . gct gCTCTct 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11914 chr11 2793828 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11915 chr11 2822390 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11916 chr11 2837637 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11917 chr11 2840920 . A C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 11918 chr11 2843487 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11919 chr11 2850853 . g gTC 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 11920 chr11 2858112 . A C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 11921 chr11 2863056 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 11922 chr11 2864159 . G T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 11923 chr11 2868878 . T C 9.31 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 11924 chr11 2888710 . G GTC 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 11925 chr11 2910034 . TAC T 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 11926 chr11 2910613 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11927 chr11 2920090 . A G 20.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=46 PL:DP:SP:GT:GQ 52,6,0:2:0:1/1:49 | |
| 11928 chr11 2929552 . A G 66.5 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=44 PL:DP:SP:GT:GQ 99,12,0:4:0:1/1:72 | |
| 11929 chr11 2936434 . G A 6.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 11930 chr11 2969298 . AG AGG 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 11931 chr11 2970450 . ACCT A 4.42 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=1,1,0,1;MQ=49;PV4=1,0.47,1,0.3 PL:DP:SP:GT:GQ 40,0,67:3:0:0/1:43 | |
| 11932 chr11 2973740 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 11933 chr11 2979798 . G T 67.1 . DP=9;AF1=1;CI95=0.5,1;DP4=0,0,0,6;MQ=47 PL:DP:SP:GT:GQ 100,18,0:6:0:1/1:90 | |
| 11934 chr11 2994440 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11935 chr11 2996853 . ta tACTTCCCTGGa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11936 chr11 3000484 . G A 4.77 . DP=10;AF1=0.4999;CI95=0.5,0.5;DP4=0,4,0,3;MQ=50;PV4=1,0.0017,0.14,0.093 PL:DP:SP:GT:GQ 33,0,123:7:0:0/1:36 | |
| 11937 chr11 3007026 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11938 chr11 3025787 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11939 chr11 3026692 . T G 52.5 . DP=15;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=45 PL:DP:SP:GT:GQ 85,12,0:4:0:1/1:72 | |
| 11940 chr11 3033675 . CA CAA 3.25 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 11941 chr11 3039921 . A G 4.13 . DP=17;AF1=0.4998;CI95=0.5,0.5;DP4=5,0,0,5;MQ=47;PV4=0.0079,0.022,0.072,1 PL:DP:SP:GT:GQ 32,0,117:10:21:0/1:35 | |
| 11942 chr11 3050448 . ATTGAGCT ATCCTTGAGCT 5.84 . INDEL;DP=10;AF1=0.508;CI95=0.5,0.5;DP4=1,0,2,0;MQ=50;PV4=1,1,1,0.15 PL:DP:SP:GT:GQ 42,0,15:3:0:0/1:18 | |
| 11943 chr11 3059441 . A G 18.1 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=2,1,0,3;MQ=47;PV4=0.4,0.12,0.032,1 PL:DP:SP:GT:GQ 48,0,85:6:4:0/1:51 | |
| 11944 chr11 3062312 . T G 12.3 . DP=24;AF1=0.5;CI95=0.5,0.5;DP4=0,6,0,4;MQ=49;PV4=1,0.094,0.0094,1 PL:DP:SP:GT:GQ 42,0,123:10:0:0/1:45 | |
| 11945 chr11 3063448 . C A 49 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=3,2,0,6;MQ=48;PV4=0.061,0.067,0.00089,1 PL:DP:SP:GT:GQ 79,0,128:11:12:0/1:82 | |
| 11946 chr11 3069268 . G C 5.46 . DP=7;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,2;MQ=47;PV4=1,0.083,0.061,1 PL:DP:SP:GT:GQ 34,0,41:3:0:0/1:36 | |
| 11947 chr11 3082004 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 11948 chr11 3098421 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11949 chr11 3109402 . C CGG 5.11 . INDEL;DP=9;AF1=0.505;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,17:3:0:0/1:20 | |
| 11950 chr11 3110394 . G C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 11951 chr11 3115354 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11952 chr11 3117115 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11953 chr11 3118835 . C A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 11954 chr11 3129027 . G A 9.31 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 11955 chr11 3129525 . GG GGTATCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11956 chr11 3146388 . C CTGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11957 chr11 3151201 . G T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 11958 chr11 3157534 . C T 4.14 . DP=3;AF1=0.5011;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,23:2:0:0/1:25 | |
| 11959 chr11 3160198 . G A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 11960 chr11 3178448 . C T 11.1 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 42,6,0:2:0:1/1:49 | |
| 11961 chr11 3179734 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 11962 chr11 3180853 . G GTGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11963 chr11 3203674 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11964 chr11 3222153 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11965 chr11 3224451 . CGGCAGAAGGCAGAAG CGGCAGAAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11966 chr11 3230274 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11967 chr11 3235866 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11968 chr11 3241176 . C G 4.77 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11969 chr11 3243880 . C T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 11970 chr11 3247115 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 11971 chr11 3249013 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11972 chr11 3249829 . G A 57 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=2,6,3,5;MQ=49;PV4=1,7.1e-06,0.058,1 PL:DP:SP:GT:GQ 87,0,234:16:0:0/1:90 | |
| 11973 chr11 3253049 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11974 chr11 3254241 . GG GGCAGAAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11975 chr11 3358542 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 11976 chr11 3360338 . G A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 11977 chr11 3367243 . a aNNNNNN 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11978 chr11 3377773 . cccgg c 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11979 chr11 3381317 . G A 99 . DP=48;AF1=0.5;CI95=0.5,0.5;DP4=9,15,7,13;MQ=48;PV4=1,9.5e-09,4.6e-11,1 PL:DP:SP:GT:GQ 201,0,255:44:0:0/1:99 | |
| 11980 chr11 3381843 . A G 33 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=48 PL:DP:SP:GT:GQ 65,9,0:3:0:1/1:63 | |
| 11981 chr11 3392745 . G A 18.1 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=8,0,7,0;MQ=50;PV4=1,5.7e-06,1,1 PL:DP:SP:GT:GQ 48,0,186:15:0:0/1:51 | |
| 11982 chr11 3435230 . C T 3.41 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=16 PL:DP:SP:GT:GQ 32,6,0:2:0:1/1:49 | |
| 11983 chr11 3502194 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 11984 chr11 3529813 . T TGGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11985 chr11 3531995 . t tTAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 11986 chr11 3532360 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 11987 chr11 3537093 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11988 chr11 3537101 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 11989 chr11 3566177 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11990 chr11 3612555 . G A 14.7 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=16 PL:DP:SP:GT:GQ 47,12,0:4:0:1/1:72 | |
| 11991 chr11 3625732 . A C 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 11992 chr11 3637450 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 11993 chr11 3638280 . C T 46.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=42 PL:DP:SP:GT:GQ 78,6,0:2:0:1/1:49 | |
| 11994 chr11 3658951 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11995 chr11 3661585 . ATGG ATGGTGG 99 . INDEL;DP=5;AF1=1;CI95=0.5,1;DP4=0,0,1,3;MQ=50 PL:DP:SP:GT:GQ 157,12,0:4:0:1/1:72 | |
| 11996 chr11 3675307 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 11997 chr11 3714489 . C T 48 . DP=24;AF1=0.5;CI95=0.5,0.5;DP4=8,7,2,5;MQ=49;PV4=0.38,3e-06,0.011,0.36 PL:DP:SP:GT:GQ 78,0,255:22:4:0/1:81 | |
| 11998 chr11 3720726 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 11999 chr11 3723817 . A AGAGTG 7.35 . INDEL;DP=9;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 12000 chr11 3740581 . G C 6.2 . DP=11;AF1=0.5;CI95=0.5,0.5;DP4=3,0,3,0;MQ=49;PV4=1,0.43,1,0.017 PL:DP:SP:GT:GQ 35,0,38:6:0:0/1:36 | |
| 12001 chr11 3746465 . C G 13.9 . DP=18;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=48 PL:DP:SP:GT:GQ 45,6,0:2:0:1/1:49 | |
| 12002 chr11 3756558 . t tGG 7.49 . INDEL;DP=6;AF1=0.5207;CI95=0.5,1;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,11:2:0:0/1:14 | |
| 12003 chr11 3780058 . AGT AGTGAGTTTTTGAGGGGT 10.8 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 12004 chr11 3799985 . G A 30.5 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=49 PL:DP:SP:GT:GQ 63,12,0:4:0:1/1:72 | |
| 12005 chr11 3825706 . cc cCCAc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12006 chr11 3829067 . A C 6.98 . DP=2;AF1=0.5003;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,28:2:0:0/1:30 | |
| 12007 chr11 3831446 . TC TCAATGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12008 chr11 3842146 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12009 chr11 3844603 . A G 37.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=42 PL:DP:SP:GT:GQ 69,6,0:2:0:1/1:49 | |
| 12010 chr11 3861650 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 12011 chr11 3863770 . acg aCGcg 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 12012 chr11 3875905 . C T 6.26 . DP=2;AF1=0.5101;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,14:2:0:0/1:17 | |
| 12013 chr11 3877048 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12014 chr11 3883496 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12015 chr11 3913590 . T A 32 . DP=23;AF1=0.5;CI95=0.5,0.5;DP4=10,0,4,0;MQ=38;PV4=1,0.0061,1,1 PL:DP:SP:GT:GQ 62,0,173:14:0:0/1:65 | |
| 12016 chr11 3922446 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12017 chr11 3925086 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 12018 chr11 3928671 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12019 chr11 3958099 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12020 chr11 3994172 . A G 77 . DP=24;AF1=0.5;CI95=0.5,0.5;DP4=7,3,0,7;MQ=48;PV4=0.0098,1,1.2e-06,1 PL:DP:SP:GT:GQ 107,0,181:17:20:0/1:99 | |
| 12021 chr11 4029273 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12022 chr11 4039225 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 12023 chr11 4069430 . A ACTCACT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12024 chr11 4095149 . CT CTT 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 12025 chr11 4104060 . A C 49 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=6,0,6,0;MQ=48;PV4=1,1e-05,0.092,0.4 PL:DP:SP:GT:GQ 79,0,164:12:0:0/1:82 | |
| 12026 chr11 4105793 . CTGA C 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 12027 chr11 4115477 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 12028 chr11 4117002 . G GACTC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 12029 chr11 4123345 . C G 98 . DP=11;AF1=1;CI95=1,1;DP4=0,0,0,9;MQ=47 PL:DP:SP:GT:GQ 131,27,0:9:0:1/1:99 | |
| 12030 chr11 4128751 . C G 18.1 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=3,4,0,4;MQ=49;PV4=0.24,0.013,0.0022,1 PL:DP:SP:GT:GQ 48,0,211:11:6:0/1:51 | |
| 12031 chr11 4128845 . G A 5.46 . DP=3;AF1=0.4999;CI95=0.5,0.5;DP4=0,2,0,1;MQ=46;PV4=1,0.13,0.19,0.33 PL:DP:SP:GT:GQ 34,0,79:3:0:0/1:37 | |
| 12032 chr11 4133317 . C A 64.1 . DP=14;AF1=1;CI95=0.5,1;DP4=0,0,0,6;MQ=47 PL:DP:SP:GT:GQ 97,18,0:6:0:1/1:90 | |
| 12033 chr11 4159466 . G A 28.2 . DP=25;AF1=0.5207;CI95=0.5,1;DP4=1,0,3,1;MQ=49;PV4=1,0.2,0.26,1 PL:DP:SP:GT:GQ 58,0,11:5:0:0/1:14 | |
| 12034 chr11 4161130 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12035 chr11 4178585 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12036 chr11 4185217 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 12037 chr11 4187031 . AAA AAAACTCCAA 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=46 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 12038 chr11 4187765 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 12039 chr11 4201919 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12040 chr11 4204555 . c cGCTGTGTTGGT 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12041 chr11 4211252 . G GA 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 12042 chr11 4228028 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 12043 chr11 4268082 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12044 chr11 4280060 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12045 chr11 4324677 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 12046 chr11 4389404 . AGGG AGG 99 . INDEL;DP=36;AF1=0.5;CI95=0.5,0.5;DP4=14,5,10,3;MQ=50;PV4=1,2.9e-07,1,1 PL:DP:SP:GT:GQ 160,0,231:32:0:0/1:99 | |
| 12047 chr11 4397319 . T C 3.01 . DP=3;AF1=0.4998;CI95=0.5,0.5;DP4=1,1,1,0;MQ=47;PV4=1,1,0,1 PL:DP:SP:GT:GQ 30,0,62:3:0:0/1:33 | |
| 12048 chr11 4404189 . c cTGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12049 chr11 4405385 . GTGGA G 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12050 chr11 4406484 . T C 13.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 12051 chr11 4407248 . A AC 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 12052 chr11 4431248 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12053 chr11 4448442 . G T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 12054 chr11 4451280 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12055 chr11 4453487 . G GC 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 12056 chr11 4460133 . c cTCG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 12057 chr11 4464915 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12058 chr11 4466748 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 12059 chr11 4470770 . G GAC 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=1,1,1,0;MQ=50;PV4=1,1,1,0.05 PL:DP:SP:GT:GQ 41,0,86:3:0:0/1:44 | |
| 12060 chr11 4471276 . G A 99 . DP=21;AF1=1;CI95=1,1;DP4=0,0,6,8;MQ=48 PL:DP:SP:GT:GQ 220,42,0:14:0:1/1:99 | |
| 12061 chr11 4496916 . C T 57 . DP=11;AF1=0.5;CI95=0.5,0.5;DP4=1,3,0,5;MQ=47;PV4=0.44,0.00015,0.00036,1 PL:DP:SP:GT:GQ 87,0,152:9:0:0/1:90 | |
| 12062 chr11 4498597 . atg a 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 12063 chr11 4499143 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12064 chr11 4519132 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12065 chr11 4531003 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12066 chr11 4549486 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12067 chr11 4551327 . ac aCAGAGTCTc 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=49 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 12068 chr11 4563084 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12069 chr11 4565318 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 12070 chr11 4566515 . C A 3.54 . DP=20;AF1=0.4998;CI95=0.5,0.5;DP4=3,2,0,3;MQ=48;PV4=0.2,0.053,0.21,1 PL:DP:SP:GT:GQ 31,0,133:8:7:0/1:34 | |
| 12071 chr11 4566518 . T C 19.1 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=2,3,0,4;MQ=47;PV4=0.44,0.078,0.074,1 PL:DP:SP:GT:GQ 49,0,126:9:4:0/1:52 | |
| 12072 chr11 4566711 . C T 99 . DP=46;AF1=0.5;CI95=0.5,0.5;DP4=19,7,3,11;MQ=49;PV4=0.0027,3.2e-12,1.2e-16,1 PL:DP:SP:GT:GQ 132,0,255:40:26:0/1:99 | |
| 12073 chr11 4567158 . TCAC TCACAC 99 . INDEL;DP=60;AF1=0.5;CI95=0.5,0.5;DP4=15,17,6,13;MQ=50;PV4=0.38,1,1,0.48 PL:DP:SP:GT:GQ 255,0,255:51:4:0/1:99 | |
| 12074 chr11 4567335 . C G 4.77 . DP=32;AF1=0.4999;CI95=0.5,0.5;DP4=2,12,0,7;MQ=50;PV4=0.53,5.7e-11,0.31,0.16 PL:DP:SP:GT:GQ 33,0,255:21:3:0/1:36 | |
| 12075 chr11 4581101 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12076 chr11 4592708 . cag cAGag 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12077 chr11 4593334 . T A 14.2 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=6,0,4,0;MQ=49;PV4=1,1.1e-07,0.012,0.094 PL:DP:SP:GT:GQ 44,0,174:10:0:0/1:47 | |
| 12078 chr11 4593411 . G A 69 . DP=32;AF1=0.5;CI95=0.5,0.5;DP4=5,16,3,7;MQ=49;PV4=1,1.1e-08,0.00011,1 PL:DP:SP:GT:GQ 99,0,255:31:0:0/1:99 | |
| 12079 chr11 4593894 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12080 chr11 4608226 . A T 3.01 . DP=7;AF1=0.4997;CI95=0.5,0.5;DP4=2,0,0,1;MQ=46;PV4=0.33,0.2,0.24,1 PL:DP:SP:GT:GQ 30,0,76:3:0:0/1:33 | |
| 12081 chr11 4622207 . G A 6.98 . DP=13;AF1=0.4999;CI95=0.5,0.5;DP4=2,1,3,0;MQ=49;PV4=1,0.15,0.44,1 PL:DP:SP:GT:GQ 36,0,75:6:0:0/1:39 | |
| 12082 chr11 4622208 . G A 4.77 . DP=14;AF1=0.4999;CI95=0.5,0.5;DP4=4,1,3,0;MQ=46;PV4=1,0.2,0.073,1 PL:DP:SP:GT:GQ 33,0,109:8:0:0/1:36 | |
| 12083 chr11 4623279 . A G 30 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=46 PL:DP:SP:GT:GQ 62,9,0:3:0:1/1:63 | |
| 12084 chr11 4624394 . T C 51.1 . DP=10;AF1=1;CI95=0.5,1;DP4=0,0,6,0;MQ=49 PL:DP:SP:GT:GQ 84,18,0:6:0:1/1:90 | |
| 12085 chr11 4626140 . T C 3.55 . DP=2;AF1=0.5004;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,26:2:0:0/1:28 | |
| 12086 chr11 4626300 . A G 43 . DP=28;AF1=0.5;CI95=0.5,0.5;DP4=20,2,5,0;MQ=49;PV4=1,0.33,1.9e-07,1 PL:DP:SP:GT:GQ 73,0,255:27:0:0/1:76 | |
| 12087 chr11 4639228 . GG GGCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12088 chr11 4698711 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 12089 chr11 4717826 . A ACC 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 12090 chr11 4746073 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12091 chr11 4788188 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12092 chr11 4790268 . C A 99 . DP=42;AF1=0.5;CI95=0.5,0.5;DP4=11,10,6,13;MQ=48;PV4=0.22,2.7e-07,1.3e-12,1 PL:DP:SP:GT:GQ 209,0,255:40:7:0/1:99 | |
| 12093 chr11 4790308 . A G 99 . DP=54;AF1=0.5;CI95=0.5,0.5;DP4=7,22,10,8;MQ=48;PV4=0.059,2.6e-17,6.3e-12,1 PL:DP:SP:GT:GQ 181,0,255:47:12:0/1:99 | |
| 12094 chr11 4790671 . C T 99 . DP=46;AF1=0.5;CI95=0.5,0.5;DP4=7,14,5,18;MQ=47;PV4=0.5,2.3e-07,8.8e-19,0.29 PL:DP:SP:GT:GQ 255,0,255:44:3:0/1:99 | |
| 12095 chr11 4790873 . CG C 24.5 . INDEL;DP=15;AF1=0.5;CI95=0.5,0.5;DP4=1,6,1,2;MQ=50;PV4=1,0.49,1,1 PL:DP:SP:GT:GQ 62,0,145:10:0:0/1:65 | |
| 12096 chr11 4794638 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12097 chr11 4808335 . A C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 12098 chr11 4815264 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12099 chr11 4825010 . T A 28.5 . DP=63;AF1=1;CI95=0.5,1;DP4=0,0,2,2;MQ=50 PL:DP:SP:GT:GQ 61,12,0:4:0:1/1:72 | |
| 12100 chr11 4825225 . A G 66.3 . DP=56;AF1=1;CI95=0.5,1;DP4=0,0,4,1;MQ=47 PL:DP:SP:GT:GQ 99,15,0:5:0:1/1:75 | |
| 12101 chr11 4854592 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12102 chr11 4860270 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12103 chr11 4868364 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12104 chr11 4881115 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12105 chr11 4881280 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 12106 chr11 4883312 . t tTCTTTCAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12107 chr11 4893107 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 12108 chr11 4896442 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 12109 chr11 4913790 . t tATA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12110 chr11 4927789 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 12111 chr11 4929040 . T A 5.46 . DP=23;AF1=0.4999;CI95=0.5,0.5;DP4=7,0,0,3;MQ=49;PV4=0.0083,3.4e-05,1.3e-06,1 PL:DP:SP:GT:GQ 34,0,186:10:21:0/1:37 | |
| 12112 chr11 4929448 . G A 99 . DP=53;AF1=0.5;CI95=0.5,0.5;DP4=7,16,11,14;MQ=49;PV4=0.38,1.6e-16,0.037,0.47 PL:DP:SP:GT:GQ 186,0,255:48:4:0/1:99 | |
| 12113 chr11 4936721 . C T 44 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=3,5,1,5;MQ=49;PV4=0.58,9.9e-08,0.038,0.42 PL:DP:SP:GT:GQ 74,0,255:14:2:0/1:77 | |
| 12114 chr11 4942771 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 12115 chr11 4945196 . T G 10.2 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 41,6,0:2:0:1/1:49 | |
| 12116 chr11 4967468 . G A 68 . DP=7;AF1=0.5;CI95=0.5,0.5;DP4=1,2,2,1;MQ=47;PV4=1,0.0055,0,0.47 PL:DP:SP:GT:GQ 98,0,124:6:0:0/1:99 | |
| 12117 chr11 4968025 . C G 7.8 . DP=12;AF1=0.5004;CI95=0.5,0.5;DP4=1,0,0,2;MQ=48;PV4=0.33,0.05,0.11,1 PL:DP:SP:GT:GQ 37,0,27:3:0:0/1:30 | |
| 12118 chr11 4976163 . C T 10.4 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 12119 chr11 4976586 . T C 31.8 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=43 PL:DP:SP:GT:GQ 63,6,0:2:0:1/1:49 | |
| 12120 chr11 4997721 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12121 chr11 5001255 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 12122 chr11 5011725 . T G 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 12123 chr11 5020189 . C T 16.1 . DP=29;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=49 PL:DP:SP:GT:GQ 48,9,0:3:0:1/1:63 | |
| 12124 chr11 5020416 . A G 17.2 . DP=58;AF1=0.508;CI95=0.5,0.5;DP4=1,1,2,2;MQ=50;PV4=1,1,0.27,1 PL:DP:SP:GT:GQ 47,0,15:6:0:0/1:18 | |
| 12125 chr11 5020509 . C T 99 . DP=62;AF1=1;CI95=0.5,1;DP4=0,1,7,5;MQ=48;PV4=0.46,0.27,0.19,1 PL:DP:SP:GT:GQ 159,12,0:13:0:1/1:72 | |
| 12126 chr11 5020799 . C T 75 . DP=49;AF1=0.6671;CI95=0.5,1;DP4=0,1,3,4;MQ=47;PV4=1,0.27,0.24,1 PL:DP:SP:GT:GQ 104,0,3:8:0:0/1:5 | |
| 12127 chr11 5020832 . C T 67.8 . DP=48;AF1=0.95;CI95=0.5,1;DP4=1,0,5,3;MQ=48;PV4=1,0.14,0.32,1 PL:DP:SP:GT:GQ 96,0,0:9:0:1/1:10 | |
| 12128 chr11 5032797 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 12129 chr11 5044731 . tg tGTGGGg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12130 chr11 5058979 . A G 8.64 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=0,2,2,0;MQ=48;PV4=0.33,0.04,0.28,0.28 PL:DP:SP:GT:GQ 38,0,77:4:5:0/1:41 | |
| 12131 chr11 5064092 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12132 chr11 5068083 . A T 14.2 . DP=11;AF1=0.5;CI95=0.5,0.5;DP4=1,4,1,3;MQ=47;PV4=1,0.12,0.095,0.17 PL:DP:SP:GT:GQ 44,0,120:9:0:0/1:47 | |
| 12133 chr11 5080068 . G A 11.3 . DP=6;AF1=0.5002;CI95=0.5,0.5;DP4=0,2,1,2;MQ=49;PV4=1,0.13,1,1 PL:DP:SP:GT:GQ 41,0,30:5:0:0/1:33 | |
| 12134 chr11 5080337 . T C 45 . DP=11;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,4;MQ=48;PV4=1,0.27,0.0072,1 PL:DP:SP:GT:GQ 75,0,91:8:0:0/1:78 | |
| 12135 chr11 5089744 . C CTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12136 chr11 5099451 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12137 chr11 5120524 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12138 chr11 5140844 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12139 chr11 5141876 . G A 20 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=12,0,9,0;MQ=50;PV4=1,2.6e-08,0.13,1 PL:DP:SP:GT:GQ 50,0,219:21:0:0/1:53 | |
| 12140 chr11 5141980 . A G 99 . DP=30;AF1=1;CI95=1,1;DP4=0,0,5,22;MQ=47 PL:DP:SP:GT:GQ 255,81,0:27:0:1/1:99 | |
| 12141 chr11 5142270 . T G 4.77 . DP=45;AF1=0.5;CI95=0.5,0.5;DP4=1,1,1,1;MQ=48;PV4=1,0.46,0.21,1 PL:DP:SP:GT:GQ 33,0,35:4:0:0/1:34 | |
| 12142 chr11 5152957 . T C 31 . DP=13;AF1=0.5;CI95=0.5,0.5;DP4=5,0,6,0;MQ=49;PV4=1,0.0008,0.041,1 PL:DP:SP:GT:GQ 61,0,139:11:0:0/1:64 | |
| 12143 chr11 5152966 . G A 12.3 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=3,0,3,0;MQ=48;PV4=1,0.29,0.029,1 PL:DP:SP:GT:GQ 42,0,60:6:0:0/1:45 | |
| 12144 chr11 5158733 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 12145 chr11 5198646 . T C 15.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=48 PL:DP:SP:GT:GQ 47,6,0:2:0:1/1:49 | |
| 12146 chr11 5199660 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 12147 chr11 5217016 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12148 chr11 5221424 . G A 60.1 . DP=22;AF1=0.5163;CI95=0.5,1;DP4=0,1,3,2;MQ=48;PV4=1,0.19,0.19,1 PL:DP:SP:GT:GQ 90,0,12:6:0:0/1:15 | |
| 12149 chr11 5224127 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 12150 chr11 5230292 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12151 chr11 5236866 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12152 chr11 5247726 . G A 38.5 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=47 PL:DP:SP:GT:GQ 71,12,0:4:0:1/1:72 | |
| 12153 chr11 5253876 . T G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 12154 chr11 5265728 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 12155 chr11 5269584 . T A 5.29 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 35,6,0:2:0:1/1:49 | |
| 12156 chr11 5289896 . AA AACA 3.81 . INDEL;DP=5;AF1=0.501;CI95=0.5,0.5;DP4=0,1,1,1;MQ=50;PV4=1,0.43,1,0.061 PL:DP:SP:GT:GQ 39,0,24:3:0:0/1:27 | |
| 12157 chr11 5296104 . G C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 12158 chr11 5322606 . A G 3.54 . DP=29;AF1=0.4998;CI95=0.5,0.5;DP4=8,4,2,1;MQ=49;PV4=1,0.0024,1.4e-05,0.062 PL:DP:SP:GT:GQ 31,0,255:15:0:0/1:34 | |
| 12159 chr11 5322737 . A G 99 . DP=53;AF1=0.5;CI95=0.5,0.5;DP4=10,19,5,4;MQ=48;PV4=0.44,0.13,1.5e-14,1 PL:DP:SP:GT:GQ 177,0,255:38:4:0/1:99 | |
| 12160 chr11 5323071 . C T 99 . DP=45;AF1=1;CI95=1,1;DP4=1,1,17,17;MQ=44;PV4=1,1,9.7e-13,1 PL:DP:SP:GT:GQ 255,52,0:36:0:1/1:99 | |
| 12161 chr11 5336716 . T A 3.01 . DP=4;AF1=0.4997;CI95=0.5,0.5;DP4=3,0,1,0;MQ=48;PV4=1,0.31,0,1 PL:DP:SP:GT:GQ 30,0,105:4:0:0/1:33 | |
| 12162 chr11 5342424 . A C 7.8 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 12163 chr11 5342432 . GT GTAGACTGTCTCACT 9.71 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=46 PL:DP:SP:GT:GQ 48,6,0:2:0:1/1:49 | |
| 12164 chr11 5344561 . G A 45 . DP=10;AF1=1;CI95=1,1;DP4=0,0,8,0;MQ=50 PL:DP:SP:GT:GQ 78,24,0:8:0:1/1:96 | |
| 12165 chr11 5344772 . T C 37.1 . DP=25;AF1=1;CI95=0.5,1;DP4=0,0,1,5;MQ=50 PL:DP:SP:GT:GQ 70,18,0:6:0:1/1:90 | |
| 12166 chr11 5344902 . C G,A 99 . DP=21;AF1=1;CI95=1,1;DP4=0,0,9,10;MQ=49 PL:DP:SP:GT:GQ 180,54,170,0,31,170:19:0:1/1:99 | |
| 12167 chr11 5345128 . G A 22 . DP=41;AF1=0.5;CI95=0.5,0.5;DP4=0,2,1,3;MQ=50;PV4=1,0.03,0.27,1 PL:DP:SP:GT:GQ 52,0,58:6:0:0/1:54 | |
| 12168 chr11 5345170 . A G 79.1 . DP=28;AF1=1;CI95=1,1;DP4=0,0,4,3;MQ=48 PL:DP:SP:GT:GQ 112,21,0:7:0:1/1:84 | |
| 12169 chr11 5345486 . G A 5.29 . DP=15;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=50 PL:DP:SP:GT:GQ 35,6,0:2:0:1/1:49 | |
| 12170 chr11 5347595 . CA CACAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12171 chr11 5354986 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 12172 chr11 5358619 . C T 3.41 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=50 PL:DP:SP:GT:GQ 32,6,0:2:0:1/1:49 | |
| 12173 chr11 5358628 . G C 12 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47 PL:DP:SP:GT:GQ 43,6,0:2:0:1/1:49 | |
| 12174 chr11 5364295 . C T 99 . DP=37;AF1=0.5;CI95=0.5,0.5;DP4=9,14,2,9;MQ=48;PV4=0.27,0.0013,4.1e-43,1 PL:DP:SP:GT:GQ 216,0,255:34:6:0/1:99 | |
| 12175 chr11 5364776 . TGTC TGTCGTC 37.5 . INDEL;DP=11;AF1=0.5;CI95=0.5,0.5;DP4=0,8,0,3;MQ=50;PV4=1,0.3,1,0.00072 PL:DP:SP:GT:GQ 75,0,201:11:0:0/1:78 | |
| 12176 chr11 5373713 . A T 99 . DP=24;AF1=1;CI95=1,1;DP4=0,0,0,23;MQ=43 PL:DP:SP:GT:GQ 231,69,0:23:0:1/1:99 | |
| 12177 chr11 5409055 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 12178 chr11 5412698 . G A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 12179 chr11 5419938 . T G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 12180 chr11 5425312 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12181 chr11 5442271 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12182 chr11 5444768 . G GAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12183 chr11 5450832 . G A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 12184 chr11 5473820 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 12185 chr11 5473834 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12186 chr11 5474885 . A G 4.77 . DP=10;AF1=0.5;CI95=0.5,0.5;DP4=1,2,0,2;MQ=47;PV4=1,1,0.002,1 PL:DP:SP:GT:GQ 33,0,35:5:0:0/1:34 | |
| 12187 chr11 5474894 . T C 80 . DP=21;AF1=0.5;CI95=0.5,0.5;DP4=4,6,2,7;MQ=48;PV4=0.63,2.8e-07,0.00054,1 PL:DP:SP:GT:GQ 110,0,255:19:2:0/1:99 | |
| 12188 chr11 5490543 . C T 11.1 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 42,6,0:2:0:1/1:49 | |
| 12189 chr11 5510284 . A G 65.2 . DP=53;AF1=1;CI95=0.5,1;DP4=1,0,3,6;MQ=49;PV4=0.4,0.19,0.24,1 PL:DP:SP:GT:GQ 97,8,0:10:0:1/1:56 | |
| 12190 chr11 5510341 . C T 55 . DP=73;AF1=0.5;CI95=0.5,0.5;DP4=24,12,17,12;MQ=50;PV4=0.61,5.5e-22,0.13,1 PL:DP:SP:GT:GQ 85,0,255:65:2:0/1:88 | |
| 12191 chr11 5510497 . T C 99 . DP=54;AF1=1;CI95=1,1;DP4=1,0,13,3;MQ=48;PV4=1,1,0.24,1 PL:DP:SP:GT:GQ 166,33,0:17:0:1/1:99 | |
| 12192 chr11 5510626 . T C 16.1 . DP=58;AF1=0.501;CI95=0.5,0.5;DP4=0,2,1,3;MQ=46;PV4=1,0.11,0.46,1 PL:DP:SP:GT:GQ 46,0,24:6:0:0/1:27 | |
| 12193 chr11 5510928 . G A 38.5 . DP=14;AF1=0.8277;CI95=0.5,1;DP4=0,1,0,9;MQ=49;PV4=1,0.019,0.29,1 PL:DP:SP:GT:GQ 67,0,1:10:0:1/1:5 | |
| 12194 chr11 5512659 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12195 chr11 5529039 . C G 4.13 . DP=7;AF1=0.4998;CI95=0.5,0.5;DP4=2,1,0,2;MQ=49;PV4=0.4,0.16,0.14,0.16 PL:DP:SP:GT:GQ 32,0,98:5:4:0/1:35 | |
| 12196 chr11 5529967 . G A 20 . DP=27;AF1=0.5;CI95=0.5,0.5;DP4=11,7,7,0;MQ=49;PV4=0.13,1.1e-05,0.00087,1 PL:DP:SP:GT:GQ 50,0,255:25:9:0/1:53 | |
| 12197 chr11 5536537 . A C 20.6 . DP=29;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=49 PL:DP:SP:GT:GQ 53,12,0:4:0:1/1:72 | |
| 12198 chr11 5536852 . A G 31 . DP=42;AF1=0.5;CI95=0.5,0.5;DP4=9,6,4,4;MQ=49;PV4=0.69,1.4e-12,0.13,1 PL:DP:SP:GT:GQ 61,0,255:23:2:0/1:64 | |
| 12199 chr11 5541805 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 12200 chr11 5549254 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12201 chr11 5566112 . C T 7.8 . DP=41;AF1=0.5;CI95=0.5,0.5;DP4=10,8,5,1;MQ=50;PV4=0.35,0.00038,0.002,1 PL:DP:SP:GT:GQ 37,0,255:24:5:0/1:40 | |
| 12202 chr11 5566365 . T C 99 . DP=52;AF1=1;CI95=1,1;DP4=0,1,26,17;MQ=48;PV4=0.41,0.31,0.13,1 PL:DP:SP:GT:GQ 255,105,0:44:0:1/1:99 | |
| 12203 chr11 5566620 . A G 99 . DP=29;AF1=0.5;CI95=0.5,0.5;DP4=6,9,7,7;MQ=48;PV4=0.72,4e-06,8.6e-11,1 PL:DP:SP:GT:GQ 177,0,255:29:1:0/1:99 | |
| 12204 chr11 5573193 . A T 40 . DP=13;AF1=0.5;CI95=0.5,0.5;DP4=5,1,5,0;MQ=48;PV4=1,4.1e-06,0.044,1 PL:DP:SP:GT:GQ 70,0,199:11:0:0/1:73 | |
| 12205 chr11 5573315 . A G 12.8 . DP=9;AF1=0.5718;CI95=0.5,1;DP4=0,1,0,6;MQ=49;PV4=1,0.019,0.36,1 PL:DP:SP:GT:GQ 42,0,6:7:0:0/1:8 | |
| 12206 chr11 5573357 . T C 23 . DP=6;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,3;MQ=49;PV4=1,0.2,0.25,1 PL:DP:SP:GT:GQ 53,0,52:5:0:0/1:52 | |
| 12207 chr11 5576443 . TT TTTATAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12208 chr11 5582571 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12209 chr11 5588722 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12210 chr11 5593467 . A G 9.52 . DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,2;MQ=45;PV4=1,1,0.15,1 PL:DP:SP:GT:GQ 39,0,43:4:0:0/1:41 | |
| 12211 chr11 5602148 . T C 3.54 . DP=42;AF1=0.4998;CI95=0.5,0.5;DP4=16,1,0,6;MQ=50;PV4=6.9e-05,8e-05,0.0061,0.3 PL:DP:SP:GT:GQ 31,0,241:23:42:0/1:34 | |
| 12212 chr11 5602275 . A G 38 . DP=21;AF1=0.5;CI95=0.5,0.5;DP4=10,3,6,1;MQ=49;PV4=1,3.2e-07,0.011,1 PL:DP:SP:GT:GQ 68,0,255:20:0:0/1:71 | |
| 12213 chr11 5602605 . G A 63 . DP=76;AF1=0.5;CI95=0.5,0.5;DP4=28,26,8,9;MQ=49;PV4=0.79,5.6e-19,1.2e-15,0.45 PL:DP:SP:GT:GQ 93,0,255:71:1:0/1:96 | |
| 12214 chr11 5602615 . A G 78 . DP=79;AF1=0.5;CI95=0.5,0.5;DP4=22,27,12,13;MQ=49;PV4=0.81,1.1e-31,5.3e-08,1 PL:DP:SP:GT:GQ 108,0,255:74:1:0/1:99 | |
| 12215 chr11 5602679 . T C 99 . DP=72;AF1=0.5;CI95=0.5,0.5;DP4=17,20,15,13;MQ=49;PV4=0.62,6.8e-18,0.00032,1 PL:DP:SP:GT:GQ 186,0,255:65:2:0/1:99 | |
| 12216 chr11 5602790 . A G 39 . DP=73;AF1=0.5;CI95=0.5,0.5;DP4=10,18,3,9;MQ=50;PV4=0.72,6.3e-15,0.0004,1 PL:DP:SP:GT:GQ 69,0,255:40:1:0/1:72 | |
| 12217 chr11 5602929 . C A 99 . DP=63;AF1=1;CI95=0.5,1;DP4=0,4,12,13;MQ=47;PV4=0.12,1,0.018,1 PL:DP:SP:GT:GQ 252,7,0:29:9:1/1:57 | |
| 12218 chr11 5602968 . G A 99 . DP=64;AF1=1;CI95=1,1;DP4=0,1,21,32;MQ=46;PV4=1,1,0.016,1 PL:DP:SP:GT:GQ 255,136,0:54:0:1/1:99 | |
| 12219 chr11 5617987 . G A 50 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=45 PL:DP:SP:GT:GQ 82,9,0:3:0:1/1:63 | |
| 12220 chr11 5623726 . T A 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,39:2:0:0/1:34 | |
| 12221 chr11 5624631 . GT GTCT 3.25 . INDEL;DP=25;AF1=0.5;CI95=0.5,0.5;DP4=3,0,1,0;MQ=49;PV4=1,1,1,0.11 PL:DP:SP:GT:GQ 38,0,55:4:0:0/1:41 | |
| 12222 chr11 5624641 . CTT CACTTTATT,CAGTCTT 3.81 . INDEL;DP=18;AF1=0.5006;CI95=0.5,0.5;DP4=1,1,0,3;MQ=49;PV4=0.4,1,1,1 PL:DP:SP:GT:GQ 41,2,14,28,0,19:5:0:0/1:29 | |
| 12223 chr11 5624919 . G GCA 7.35 . INDEL;DP=4;AF1=0.5004;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,28:2:0:0/1:31 | |
| 12224 chr11 5629607 . G A 29 . DP=25;AF1=1;CI95=0.5,1;DP4=0,0,2,1;MQ=48 PL:DP:SP:GT:GQ 61,9,0:3:0:1/1:63 | |
| 12225 chr11 5632212 . G A 42 . DP=50;AF1=0.5003;CI95=0.5,0.5;DP4=2,0,1,4;MQ=48;PV4=0.14,0.17,0.12,1 PL:DP:SP:GT:GQ 72,0,29:7:8:0/1:32 | |
| 12226 chr11 5662763 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12227 chr11 5679102 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12228 chr11 5692817 . T G 30 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=47 PL:DP:SP:GT:GQ 62,9,0:3:0:1/1:63 | |
| 12229 chr11 5701281 . G A 21 . DP=56;AF1=0.5;CI95=0.5,0.5;DP4=4,18,4,2;MQ=49;PV4=0.038,1.6e-05,6.6e-05,0.45 PL:DP:SP:GT:GQ 51,0,255:28:14:0/1:54 | |
| 12230 chr11 5701409 . G C 99 . DP=30;AF1=0.5;CI95=0.5,0.5;DP4=3,16,0,9;MQ=48;PV4=0.53,9e-06,2.7e-18,1 PL:DP:SP:GT:GQ 136,0,255:28:3:0/1:99 | |
| 12231 chr11 5707585 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12232 chr11 5709779 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12233 chr11 5711135 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 12234 chr11 5717762 . T C 99 . DP=35;AF1=1;CI95=1,1;DP4=1,0,11,18;MQ=47;PV4=0.4,1,0.026,1 PL:DP:SP:GT:GQ 255,69,0:30:0:1/1:99 | |
| 12235 chr11 5718517 . G A 27.5 . DP=17;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=49 PL:DP:SP:GT:GQ 60,12,0:4:0:1/1:72 | |
| 12236 chr11 5719667 . T C 46 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=0,8,0,6;MQ=49;PV4=1,4.5e-10,0.0084,1 PL:DP:SP:GT:GQ 76,0,198:14:0:0/1:79 | |
| 12237 chr11 5749091 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12238 chr11 5750023 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 12239 chr11 5758002 . A G 99 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=2,3,4,3;MQ=47;PV4=1,6.3e-05,0.011,0.44 PL:DP:SP:GT:GQ 142,0,180:12:0:0/1:99 | |
| 12240 chr11 5758062 . T C 99 . DP=17;AF1=1;CI95=1,1;DP4=0,0,5,10;MQ=48 PL:DP:SP:GT:GQ 208,45,0:15:0:1/1:99 | |
| 12241 chr11 5758118 . A C 3.98 . DP=31;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 33,6,0:2:0:1/1:49 | |
| 12242 chr11 5762389 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 12243 chr11 5766940 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 12244 chr11 5767883 . a aTCGG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12245 chr11 5776470 . T G 22 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,1,2;MQ=50 PL:DP:SP:GT:GQ 54,9,0:3:0:1/1:63 | |
| 12246 chr11 5776484 . A T 3.01 . DP=7;AF1=0.4997;CI95=0.5,0.5;DP4=3,2,2,0;MQ=49;PV4=1,0.0033,0.023,1 PL:DP:SP:GT:GQ 30,0,193:7:0:0/1:33 | |
| 12247 chr11 5781183 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12248 chr11 5799049 . A C 6.2 . DP=13;AF1=0.4999;CI95=0.5,0.5;DP4=4,1,0,3;MQ=49;PV4=0.14,0.053,0.001,1 PL:DP:SP:GT:GQ 35,0,136:8:8:0/1:38 | |
| 12249 chr11 5802416 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 12250 chr11 5809308 . A T 12 . DP=11;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=49 PL:DP:SP:GT:GQ 43,6,0:2:0:1/1:49 | |
| 12251 chr11 5809477 . A G 18.1 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=3,2,2,3;MQ=50;PV4=1,0.0078,1,1 PL:DP:SP:GT:GQ 48,0,134:10:0:0/1:51 | |
| 12252 chr11 5809548 . G A 99 . DP=38;AF1=0.5;CI95=0.5,0.5;DP4=4,17,4,11;MQ=49;PV4=0.69,1.7e-13,0.001,1 PL:DP:SP:GT:GQ 148,0,255:36:2:0/1:99 | |
| 12253 chr11 5809746 . C T 99 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=0,4,1,6;MQ=47;PV4=1,3.8e-05,0.0028,0.13 PL:DP:SP:GT:GQ 139,0,127:11:0:0/1:99 | |
| 12254 chr11 5810080 . T C 76 . DP=31;AF1=0.5;CI95=0.5,0.5;DP4=0,15,3,12;MQ=50;PV4=0.22,7.8e-24,0.11,1 PL:DP:SP:GT:GQ 106,0,234:30:6:0/1:99 | |
| 12255 chr11 5810103 . AATA AA 18.5 . INDEL;DP=11;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,2;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 56,0,45:4:0:0/1:48 | |
| 12256 chr11 5810115 . AG A 18.5 . INDEL;DP=9;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,3;MQ=50;PV4=1,0.002,1,0.31 PL:DP:SP:GT:GQ 56,0,82:6:0:0/1:59 | |
| 12257 chr11 5811524 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 12258 chr11 5823295 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 12259 chr11 5827906 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12260 chr11 5832884 . A T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 12261 chr11 5833815 . G T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 12262 chr11 5841068 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12263 chr11 5841856 . C T 99 . DP=33;AF1=1;CI95=0.5,1;DP4=1,1,9,15;MQ=45;PV4=1,0.076,0.0011,1 PL:DP:SP:GT:GQ 255,10,0:26:0:1/1:60 | |
| 12264 chr11 5842356 . A G 67 . DP=35;AF1=0.5;CI95=0.5,0.5;DP4=18,6,3,4;MQ=49;PV4=0.17,7.5e-05,4.4e-06,0.23 PL:DP:SP:GT:GQ 97,0,255:31:8:0/1:99 | |
| 12265 chr11 5842628 . T C 30.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=45 PL:DP:SP:GT:GQ 62,6,0:2:0:1/1:49 | |
| 12266 chr11 5862653 . T C 99 . DP=28;AF1=0.5;CI95=0.5,0.5;DP4=4,15,5,3;MQ=48;PV4=0.072,1.8e-05,4.5e-11,0.017 PL:DP:SP:GT:GQ 161,0,255:27:11:0/1:99 | |
| 12267 chr11 5862780 . T C 39 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=4,6,3,3;MQ=49;PV4=1,9.7e-08,0.062,1 PL:DP:SP:GT:GQ 69,0,255:16:0:0/1:72 | |
| 12268 chr11 5862845 . A G 21 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=0,2,2,2;MQ=48;PV4=0.47,0.0029,0.27,1 PL:DP:SP:GT:GQ 51,0,70:6:3:0/1:54 | |
| 12269 chr11 5862984 . G C 30 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=4,4,2,1;MQ=48;PV4=1,0.00024,2.3e-05,1 PL:DP:SP:GT:GQ 60,0,255:11:0:0/1:63 | |
| 12270 chr11 5863013 . T C 40 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=7,3,2,3;MQ=49;PV4=0.33,1.2e-06,0.0046,1 PL:DP:SP:GT:GQ 70,0,255:15:5:0/1:73 | |
| 12271 chr11 5863113 . G A 99 . DP=28;AF1=0.5;CI95=0.5,0.5;DP4=0,12,0,15;MQ=46;PV4=1,5.5e-05,5.6e-18,1 PL:DP:SP:GT:GQ 189,0,214:27:0:0/1:99 | |
| 12272 chr11 5864441 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12273 chr11 5879836 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12274 chr11 5895202 . A ATTTC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 12275 chr11 5902440 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12276 chr11 5906048 . G A 99 . DP=57;AF1=1;CI95=1,1;DP4=1,0,21,28;MQ=46;PV4=0.44,0.24,0.014,1 PL:DP:SP:GT:GQ 255,118,0:50:0:1/1:99 | |
| 12277 chr11 5906073 . G T 74.1 . DP=53;AF1=1;CI95=1,1;DP4=0,0,4,3;MQ=48 PL:DP:SP:GT:GQ 107,21,0:7:0:1/1:84 | |
| 12278 chr11 5906143 . T C 99 . DP=54;AF1=0.5;CI95=0.5,0.5;DP4=13,11,11,9;MQ=49;PV4=1,3.5e-11,9.6e-06,1 PL:DP:SP:GT:GQ 189,0,255:44:0:0/1:99 | |
| 12279 chr11 5906192 . A C 99 . DP=68;AF1=1;CI95=1,1;DP4=0,1,27,31;MQ=46;PV4=1,0.069,0.19,1 PL:DP:SP:GT:GQ 255,146,0:59:0:1/1:99 | |
| 12280 chr11 5906205 . G A 99 . DP=63;AF1=0.5;CI95=0.5,0.5;DP4=11,16,13,17;MQ=46;PV4=1,0.035,2.4e-09,1 PL:DP:SP:GT:GQ 255,0,255:57:0:0/1:99 | |
| 12281 chr11 5922707 . C T 6.02 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 36,6,0:2:0:1/1:49 | |
| 12282 chr11 5933930 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 12283 chr11 5947828 . T G 4.13 . DP=2;AF1=0.5002;CI95=0.5,0.5;DP4=1,0,1,0;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,28:2:0:0/1:30 | |
| 12284 chr11 5959639 . C A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 12285 chr11 5968728 . T C 99 . DP=30;AF1=0.5;CI95=0.5,0.5;DP4=12,7,4,3;MQ=48;PV4=1,0.14,5.1e-14,1 PL:DP:SP:GT:GQ 154,0,255:26:0:0/1:99 | |
| 12286 chr11 5971782 . G T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 12287 chr11 5983543 . ctg cTGGGtg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12288 chr11 5997424 . GAAAGAA G 7.35 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 12289 chr11 6013354 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 12290 chr11 6015846 . T TAGTA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=48;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,40:2:0:0/1:42 | |
| 12291 chr11 6018181 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 12292 chr11 6048056 . T C 99 . DP=50;AF1=0.5;CI95=0.5,0.5;DP4=16,9,15,3;MQ=49;PV4=0.19,4.5e-06,1.2e-08,0.31 PL:DP:SP:GT:GQ 158,0,255:43:7:0/1:99 | |
| 12293 chr11 6052566 . Ag AGTTAGTg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12294 chr11 6075204 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12295 chr11 6088738 . C T 15.1 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=50 PL:DP:SP:GT:GQ 47,9,0:3:0:1/1:63 | |
| 12296 chr11 6095184 . A C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 12297 chr11 6108771 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 12298 chr11 6109450 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 12299 chr11 6120191 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12300 chr11 6121889 . A AGCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12301 chr11 6131392 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 12302 chr11 6185850 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12303 chr11 6193672 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 12304 chr11 6195095 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12305 chr11 6217207 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 12306 chr11 6220376 . G C 33 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=7,0,8,0;MQ=50;PV4=1,3.3e-12,0.11,1 PL:DP:SP:GT:GQ 63,0,182:15:0:0/1:66 | |
| 12307 chr11 6237881 . G C 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,0,1;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 12308 chr11 6239344 . G A 99 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=2,1,2,3;MQ=45;PV4=1,0.038,6.4e-06,1 PL:DP:SP:GT:GQ 155,0,110:8:0:0/1:99 | |
| 12309 chr11 6243999 . G A 60 . DP=13;AF1=0.5;CI95=0.5,0.5;DP4=6,0,7,0;MQ=48;PV4=1,4.5e-05,0.0013,1 PL:DP:SP:GT:GQ 90,0,160:13:0:0/1:93 | |
| 12310 chr11 6245555 . C T 99 . DP=26;AF1=1;CI95=1,1;DP4=0,0,7,3;MQ=48 PL:DP:SP:GT:GQ 146,30,0:10:0:1/1:99 | |
| 12311 chr11 6250044 . T G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 12312 chr11 6252442 . gat g 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 12313 chr11 6266105 . AG AGGAGACGGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12314 chr11 6269741 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 12315 chr11 6283087 . ta tACa 3.93 . INDEL;DP=2;AF1=0.5263;CI95=0.5,1;DP4=0,1,0,1;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 39,0,10:2:0:0/1:13 | |
| 12316 chr11 6291440 . G GATCT 5.08 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 12317 chr11 6292065 . C A 30.5 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=49 PL:DP:SP:GT:GQ 63,12,0:4:0:1/1:72 | |
| 12318 chr11 6324021 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 12319 chr11 6327829 . A C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 12320 chr11 6339021 . aagagag aagag 18.3 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 57,6,0:2:0:1/1:49 | |
| 12321 chr11 6340312 . A C 3.01 . DP=11;AF1=0.4998;CI95=0.5,0.5;DP4=2,0,2,0;MQ=49;PV4=1,0.33,0.21,0.35 PL:DP:SP:GT:GQ 30,0,35:4:0:0/1:32 | |
| 12322 chr11 6347040 . C CAAAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12323 chr11 6365837 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 12324 chr11 6379301 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 12325 chr11 6399159 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 12326 chr11 6413091 . C G 5.46 . DP=14;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,2;MQ=46;PV4=1,0.011,0.21,1 PL:DP:SP:GT:GQ 34,0,40:4:0:0/1:36 | |
| 12327 chr11 6427204 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12328 chr11 6445694 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12329 chr11 6452618 . G A 99 . DP=52;AF1=0.5;CI95=0.5,0.5;DP4=3,19,7,20;MQ=46;PV4=0.48,0.019,1.4e-31,1 PL:DP:SP:GT:GQ 255,0,255:49:3:0/1:99 | |
| 12330 chr11 6456547 . G T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12331 chr11 6462278 . CAACT C 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 12332 chr11 6463448 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12333 chr11 6466547 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12334 chr11 6468349 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 12335 chr11 6499519 . AC ACGC 3.25 . INDEL;DP=11;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,1;MQ=50;PV4=1,1,1,0.24 PL:DP:SP:GT:GQ 38,0,72:4:0:0/1:41 | |
| 12336 chr11 6500309 . A G 32.1 . DP=17;AF1=0.5129;CI95=0.5,0.5;DP4=0,1,3,1;MQ=48;PV4=0.4,0.22,0.27,1 PL:DP:SP:GT:GQ 62,0,13:5:0:0/1:16 | |
| 12337 chr11 6501525 . A C 3.01 . DP=12;AF1=0.4997;CI95=0.5,0.5;DP4=6,0,2,1;MQ=49;PV4=0.33,0.0011,0.38,0.23 PL:DP:SP:GT:GQ 30,0,166:9:0:0/1:33 | |
| 12338 chr11 6502727 . C G 7.59 . DP=9;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=49 PL:DP:SP:GT:GQ 38,6,0:2:0:1/1:49 | |
| 12339 chr11 6502780 . C A 45.3 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,1,4;MQ=50 PL:DP:SP:GT:GQ 78,15,0:5:0:1/1:75 | |
| 12340 chr11 6503449 . T G 84 . DP=11;AF1=0.5;CI95=0.5,0.5;DP4=1,3,1,5;MQ=47;PV4=1,0.041,0.016,1 PL:DP:SP:GT:GQ 114,0,116:10:0:0/1:99 | |
| 12341 chr11 6510068 . G A 4.13 . DP=2;AF1=0.5001;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,30:2:0:0/1:31 | |
| 12342 chr11 6519642 . G A 13 . DP=9;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=48 PL:DP:SP:GT:GQ 44,6,0:2:0:1/1:49 | |
| 12343 chr11 6520015 . G T 42.2 . DP=23;AF1=1;CI95=0.5,1;DP4=0,1,8,0;MQ=49;PV4=0.11,1,0.26,1 PL:DP:SP:GT:GQ 74,8,0:9:0:1/1:56 | |
| 12344 chr11 6520164 . T A 99 . DP=29;AF1=1;CI95=1,1;DP4=0,1,9,13;MQ=47;PV4=1,0.47,0.11,1 PL:DP:SP:GT:GQ 255,41,0:23:0:1/1:99 | |
| 12345 chr11 6524791 . g gATCGTATAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12346 chr11 6527176 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 12347 chr11 6541225 . C G 70 . DP=55;AF1=0.5;CI95=0.5,0.5;DP4=10,23,6,15;MQ=50;PV4=1,1.2e-16,0.21,1 PL:DP:SP:GT:GQ 100,0,255:54:0:0/1:99 | |
| 12348 chr11 6541372 . CAG CAGAAG 3.25 . INDEL;DP=7;AF1=0.5;CI95=0.5,0.5;DP4=1,2,0,1;MQ=50;PV4=1,1,1,0.25 PL:DP:SP:GT:GQ 38,0,102:4:0:0/1:41 | |
| 12349 chr11 6541580 . T G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 12350 chr11 6547258 . ttcc t 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12351 chr11 6564748 . TA TAA 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 12352 chr11 6568603 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12353 chr11 6580303 . AG AGTG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12354 chr11 6598671 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 12355 chr11 6619462 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 12356 chr11 6620689 . T A 6.98 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12357 chr11 6622714 . G A 99 . DP=58;AF1=0.5;CI95=0.5,0.5;DP4=18,18,13,8;MQ=49;PV4=0.42,3.6e-13,1.7e-07,1 PL:DP:SP:GT:GQ 181,0,255:57:4:0/1:99 | |
| 12358 chr11 6629530 . G A 10.4 . DP=20;AF1=0.5;CI95=0.5,0.5;DP4=1,11,0,5;MQ=50;PV4=1,4.7e-05,0.0098,0.5 PL:DP:SP:GT:GQ 40,0,255:17:0:0/1:43 | |
| 12359 chr11 6629665 . C T 99 . DP=46;AF1=0.5;CI95=0.5,0.5;DP4=11,11,6,12;MQ=48;PV4=0.35,5.5e-16,4.8e-08,0.49 PL:DP:SP:GT:GQ 201,0,255:40:5:0/1:99 | |
| 12360 chr11 6629729 . C G 17.1 . DP=26;AF1=0.5;CI95=0.5,0.5;DP4=2,10,0,5;MQ=48;PV4=1,0.17,0.21,1 PL:DP:SP:GT:GQ 47,0,185:17:0:0/1:50 | |
| 12361 chr11 6629738 . A G 20 . DP=24;AF1=0.5;CI95=0.5,0.5;DP4=0,8,0,5;MQ=49;PV4=1,0.1,0.035,1 PL:DP:SP:GT:GQ 50,0,118:13:0:0/1:53 | |
| 12362 chr11 6630028 . TCCCCC TCCCC 9.9 . INDEL;DP=5;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=50 PL:DP:SP:GT:GQ 49,9,0:3:0:1/1:63 | |
| 12363 chr11 6630833 . G A 76 . DP=37;AF1=0.5;CI95=0.5,0.5;DP4=4,18,3,6;MQ=49;PV4=0.38,0.061,6.3e-05,1 PL:DP:SP:GT:GQ 106,0,255:31:4:0/1:99 | |
| 12364 chr11 6630927 . G C 4.13 . DP=14;AF1=0.4998;CI95=0.5,0.5;DP4=3,4,0,3;MQ=49;PV4=0.47,0.087,0.0017,0.43 PL:DP:SP:GT:GQ 32,0,207:10:3:0/1:35 | |
| 12365 chr11 6631596 . T A 33 . DP=26;AF1=0.5;CI95=0.5,0.5;DP4=3,3,0,6;MQ=49;PV4=0.18,0.0065,0.083,0.47 PL:DP:SP:GT:GQ 63,0,172:12:7:0/1:66 | |
| 12366 chr11 6632347 . cc cCTTc 3.25 . INDEL;DP=6;AF1=0.5;CI95=0.5,0.5;DP4=3,0,1,0;MQ=50;PV4=1,1,1,0.36 PL:DP:SP:GT:GQ 38,0,97:4:0:0/1:41 | |
| 12367 chr11 6632857 . A T 49 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=7,0,4,0;MQ=48;PV4=1,0.29,0.00032,1 PL:DP:SP:GT:GQ 79,0,148:11:0:0/1:82 | |
| 12368 chr11 6634648 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12369 chr11 6636106 . T A 99 . DP=37;AF1=0.5;CI95=0.5,0.5;DP4=5,15,9,5;MQ=49;PV4=0.035,1.5e-05,0.00087,1 PL:DP:SP:GT:GQ 147,0,255:34:15:0/1:99 | |
| 12370 chr11 6637504 . G A 69 . DP=32;AF1=0.5;CI95=0.5,0.5;DP4=17,0,11,0;MQ=46;PV4=1,5e-06,5.3e-05,1 PL:DP:SP:GT:GQ 99,0,227:28:0:0/1:99 | |
| 12371 chr11 6637518 . A G 99 . DP=33;AF1=1;CI95=1,1;DP4=0,0,25,2;MQ=45 PL:DP:SP:GT:GQ 212,81,0:27:0:1/1:99 | |
| 12372 chr11 6638936 . T G 18.1 . DP=30;AF1=0.5;CI95=0.5,0.5;DP4=13,2,0,7;MQ=49;PV4=0.00021,6e-06,0.0044,1 PL:DP:SP:GT:GQ 48,0,255:22:37:0/1:51 | |
| 12373 chr11 6645288 . G T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 12374 chr11 6649066 . AT ATTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12375 chr11 6649878 . T TC 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 12376 chr11 6685643 . C A 5.5 . DP=2;AF1=0.5063;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,16:2:0:0/1:19 | |
| 12377 chr11 6692393 . T C 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 12378 chr11 6698023 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12379 chr11 6702707 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 12380 chr11 6703990 . GTC GTCTTC 26.5 . INDEL;DP=28;AF1=0.5;CI95=0.5,0.5;DP4=2,5,3,0;MQ=50;PV4=0.17,1,0.066,1 PL:DP:SP:GT:GQ 64,0,142:10:8:0/1:67 | |
| 12381 chr11 6711070 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12382 chr11 6721445 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12383 chr11 6727335 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12384 chr11 6731596 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12385 chr11 6744718 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 12386 chr11 6767953 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12387 chr11 6776183 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12388 chr11 6789410 . A AAGG 3.25 . INDEL;DP=8;AF1=0.5;CI95=0.5,0.5;DP4=1,2,0,1;MQ=50;PV4=1,1,1,0.37 PL:DP:SP:GT:GQ 38,0,88:4:0:0/1:41 | |
| 12389 chr11 6789929 . C A 25 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=6,0,2,2;MQ=48;PV4=0.13,4.9e-05,0.25,1 PL:DP:SP:GT:GQ 55,0,163:10:9:0/1:58 | |
| 12390 chr11 6790106 . T C,G 99 . DP=17;AF1=1;CI95=1,1;DP4=0,0,9,3;MQ=47 PL:DP:SP:GT:GQ 166,33,156,0,12,156:12:0:1/1:99 | |
| 12391 chr11 6799099 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12392 chr11 6802333 . T TTC 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 12393 chr11 6806524 . C G 4.77 . DP=17;AF1=0.4999;CI95=0.5,0.5;DP4=2,7,0,3;MQ=48;PV4=1,1,0.0075,1 PL:DP:SP:GT:GQ 33,0,112:12:0:0/1:36 | |
| 12394 chr11 6806610 . A G 99 . DP=11;AF1=0.5003;CI95=0.5,0.5;DP4=0,2,1,5;MQ=44;PV4=1,1,0.0048,0.015 PL:DP:SP:GT:GQ 163,0,29:8:0:0/1:32 | |
| 12395 chr11 6806671 . C G 22 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=5,4,1,4;MQ=49;PV4=0.3,0.016,0.032,0.39 PL:DP:SP:GT:GQ 52,0,216:14:5:0/1:55 | |
| 12396 chr11 6807216 . C T 7.8 . DP=24;AF1=0.5;CI95=0.5,0.5;DP4=0,5,1,2;MQ=49;PV4=0.37,0.0093,1,1 PL:DP:SP:GT:GQ 37,0,136:8:0:0/1:40 | |
| 12397 chr11 6816288 . CAGAGAG CAGAG 58.5 . INDEL;DP=13;AF1=0.5;CI95=0.5,0.5;DP4=2,5,1,2;MQ=50;PV4=1,8.8e-05,1,1 PL:DP:SP:GT:GQ 96,0,245:10:0:0/1:99 | |
| 12398 chr11 6816778 . A G 99 . DP=46;AF1=1;CI95=1,1;DP4=0,1,8,5;MQ=48;PV4=0.43,0.44,1,1 PL:DP:SP:GT:GQ 147,21,0:14:0:1/1:84 | |
| 12399 chr11 6816875 . G A 99 . DP=60;AF1=0.5;CI95=0.5,0.5;DP4=10,18,10,14;MQ=49;PV4=0.78,8e-17,0.004,1 PL:DP:SP:GT:GQ 164,0,255:52:1:0/1:99 | |
| 12400 chr11 6817690 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 12401 chr11 6834053 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12402 chr11 6839433 . gga gGATAAACCCga 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 12403 chr11 6848585 . G C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 12404 chr11 6853320 . C CAACAA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 12405 chr11 6865501 . C T 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12406 chr11 6865648 . A G 26 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=11,0,4,1;MQ=49;PV4=0.31,0.00028,0.13,1 PL:DP:SP:GT:GQ 56,0,212:16:0:0/1:59 | |
| 12407 chr11 6865831 . A G 99 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=4,3,1,4;MQ=47;PV4=0.29,1,0,1 PL:DP:SP:GT:GQ 145,0,206:12:5:0/1:99 | |
| 12408 chr11 6883813 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12409 chr11 6891704 . T C 77 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=5,5,6,5;MQ=49;PV4=1,3.1e-06,0.42,1 PL:DP:SP:GT:GQ 107,0,255:21:0:0/1:99 | |
| 12410 chr11 6897633 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 12411 chr11 6898540 . G A 99 . DP=52;AF1=0.5;CI95=0.5,0.5;DP4=10,12,12,14;MQ=50;PV4=1,3.3e-20,0.041,1 PL:DP:SP:GT:GQ 155,0,255:48:0:0/1:99 | |
| 12412 chr11 6916673 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12413 chr11 6940563 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12414 chr11 6942628 . A C,G 97.5 . DP=49;AF1=1;CI95=0.5,1;DP4=0,1,8,3;MQ=48;PV4=0.33,1,0.17,1 PL:DP:SP:GT:GQ 130,12,115,0,4,125:12:0:1/1:72 | |
| 12415 chr11 6942952 . T C 8.44 . DP=17;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 39,6,0:2:0:1/1:49 | |
| 12416 chr11 6943254 . C T 99 . DP=18;AF1=1;CI95=1,1;DP4=0,0,0,13;MQ=43 PL:DP:SP:GT:GQ 219,39,0:13:0:1/1:99 | |
| 12417 chr11 6950269 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 12418 chr11 6952391 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 12419 chr11 6954000 . C A 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 12420 chr11 6955801 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 12421 chr11 6963461 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12422 chr11 6963766 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 12423 chr11 6976988 . A T 99 . DP=36;AF1=1;CI95=1,1;DP4=0,2,12,9;MQ=46;PV4=0.22,1,0.2,1 PL:DP:SP:GT:GQ 249,21,0:23:7:1/1:84 | |
| 12424 chr11 6983625 . G C 10.4 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 12425 chr11 6986709 . ACT ACTGCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12426 chr11 7022717 . T C 3.01 . DP=6;AF1=0.4997;CI95=0.5,0.5;DP4=1,2,1,0;MQ=48;PV4=1,0.059,0,0.36 PL:DP:SP:GT:GQ 30,0,130:4:0:0/1:33 | |
| 12427 chr11 7025659 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12428 chr11 7043738 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12429 chr11 7044829 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12430 chr11 7059960 . A C 16.1 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=0,1,2,1;MQ=50;PV4=1,0.00085,0.33,0.18 PL:DP:SP:GT:GQ 46,0,38:4:0:0/1:40 | |
| 12431 chr11 7060236 . TG T 52.5 . INDEL;DP=6;AF1=0.5008;CI95=0.5,0.5;DP4=0,1,1,3;MQ=50;PV4=1,0.0065,1,0.4 PL:DP:SP:GT:GQ 90,0,25:5:0:0/1:28 | |
| 12432 chr11 7063755 . C T 99 . DP=41;AF1=1;CI95=1,1;DP4=0,0,10,6;MQ=47 PL:DP:SP:GT:GQ 200,48,0:16:0:1/1:99 | |
| 12433 chr11 7065289 . C A 63.8 . DP=13;AF1=0.95;CI95=0.5,1;DP4=0,1,0,11;MQ=48;PV4=1,0.028,0.2,1 PL:DP:SP:GT:GQ 92,0,0:12:0:1/1:10 | |
| 12434 chr11 7086006 . AA AAGTATA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12435 chr11 7103779 . G C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 12436 chr11 7111153 . C A 52 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=3,2,0,6;MQ=48;PV4=0.061,0.22,0.011,1 PL:DP:SP:GT:GQ 82,0,107:11:12:0/1:85 | |
| 12437 chr11 7112252 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12438 chr11 7113290 . G GCGACGAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12439 chr11 7122670 . G GC 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 12440 chr11 7138399 . T TCG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 12441 chr11 7153883 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12442 chr11 7159450 . T A 4.77 . DP=2;AF1=0.5007;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,25:2:0:0/1:27 | |
| 12443 chr11 7172804 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12444 chr11 7179572 . C CGTTGGCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12445 chr11 7189408 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12446 chr11 7215776 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12447 chr11 7215799 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12448 chr11 7238938 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12449 chr11 7272438 . T A 6.2 . DP=2;AF1=0.5002;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,29:2:0:0/1:31 | |
| 12450 chr11 7324475 . T C 61.3 . DP=37;AF1=1;CI95=0.5,1;DP4=0,0,3,2;MQ=48 PL:DP:SP:GT:GQ 94,15,0:5:0:1/1:75 | |
| 12451 chr11 7343629 . C CGCGAAA 7.35 . INDEL;DP=2;AF1=0.5001;CI95=0.5,0.5;DP4=1,0,1,0;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,33:2:0:0/1:36 | |
| 12452 chr11 7358594 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12453 chr11 7376842 . A T 5.47 . DP=2;AF1=0.5019;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,21:2:0:0/1:24 | |
| 12454 chr11 7385131 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12455 chr11 7420185 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12456 chr11 7438913 . A AGCCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12457 chr11 7446243 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12458 chr11 7468678 . t tCA 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 12459 chr11 7472036 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12460 chr11 7479623 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 12461 chr11 7491396 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12462 chr11 7503620 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 12463 chr11 7509329 . T A 8.44 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 39,6,0:2:0:1/1:49 | |
| 12464 chr11 7509336 . CAAA CAAACTTAAAA 4.42 . INDEL;DP=4;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=49 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 12465 chr11 7513969 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 12466 chr11 7519793 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12467 chr11 7521740 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12468 chr11 7529195 . C G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 12469 chr11 7529274 . G A 6.02 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 36,6,0:2:0:1/1:49 | |
| 12470 chr11 7539300 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12471 chr11 7555098 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 12472 chr11 7559163 . T TTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12473 chr11 7576787 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 12474 chr11 7585714 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12475 chr11 7586738 . G T 12 . DP=21;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 43,6,0:2:0:1/1:49 | |
| 12476 chr11 7599454 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 12477 chr11 7606168 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 12478 chr11 7616189 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 12479 chr11 7617986 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12480 chr11 7618796 . T C 44 . DP=20;AF1=0.5;CI95=0.5,0.5;DP4=6,0,11,0;MQ=50;PV4=1,0.0013,0.24,1 PL:DP:SP:GT:GQ 74,0,108:17:0:0/1:77 | |
| 12481 chr11 7618953 . G A 36 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=0,8,0,5;MQ=49;PV4=1,5.9e-08,0.018,1 PL:DP:SP:GT:GQ 66,0,200:13:0:0/1:69 | |
| 12482 chr11 7620741 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 12483 chr11 7627759 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12484 chr11 7632435 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12485 chr11 7642407 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 12486 chr11 7651399 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12487 chr11 7662732 . C T 99 . DP=48;AF1=0.5;CI95=0.5,0.5;DP4=8,21,6,7;MQ=48;PV4=0.3,0.0024,1.5e-32,1 PL:DP:SP:GT:GQ 250,0,255:42:5:0/1:99 | |
| 12488 chr11 7669775 . G C 22 . DP=17;AF1=1;CI95=0.5,1;DP4=0,0,2,1;MQ=47 PL:DP:SP:GT:GQ 54,9,0:3:0:1/1:63 | |
| 12489 chr11 7670752 . T G 8.44 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=46 PL:DP:SP:GT:GQ 39,6,0:2:0:1/1:49 | |
| 12490 chr11 7678017 . T C 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 12491 chr11 7686596 . G A 79.3 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=45 PL:DP:SP:GT:GQ 112,15,0:5:0:1/1:75 | |
| 12492 chr11 7687669 . A C 19 . DP=11;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=49 PL:DP:SP:GT:GQ 51,9,0:3:0:1/1:63 | |
| 12493 chr11 7687715 . T C 91.1 . DP=21;AF1=1;CI95=0.5,1;DP4=0,0,2,4;MQ=47 PL:DP:SP:GT:GQ 124,18,0:6:0:1/1:90 | |
| 12494 chr11 7687931 . CT CTAGTT 7.36 . INDEL;DP=2;AF1=0.502;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,21:2:0:0/1:24 | |
| 12495 chr11 7689633 . A C 12 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 43,6,0:2:0:1/1:49 | |
| 12496 chr11 7702415 . G T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 12497 chr11 7705008 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 12498 chr11 7711904 . G T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 12499 chr11 7738741 . g gAA 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 12500 chr11 7778046 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12501 chr11 7788640 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 12502 chr11 7843656 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12503 chr11 7847466 . A G 9.52 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=2,6,0,3;MQ=49;PV4=1,0.075,0.00013,1 PL:DP:SP:GT:GQ 39,0,204:11:0:0/1:42 | |
| 12504 chr11 7871011 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12505 chr11 7871943 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12506 chr11 7874057 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12507 chr11 7926185 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 12508 chr11 7928298 . A G 8.65 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 12509 chr11 7929064 . tct tCTAGAct 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12510 chr11 7929197 . t tTTCGATAG 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=49 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 12511 chr11 7931301 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 12512 chr11 7939981 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12513 chr11 7950278 . G A 3.54 . DP=10;AF1=0.4998;CI95=0.5,0.5;DP4=0,6,0,2;MQ=48;PV4=1,0.02,0.039,1 PL:DP:SP:GT:GQ 31,0,169:8:0:0/1:34 | |
| 12514 chr11 7960301 . T TAC 5.08 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=2,0,0,1;MQ=50;PV4=0.33,1,1,0.02 PL:DP:SP:GT:GQ 41,0,47:3:0:0/1:43 | |
| 12515 chr11 7960766 . A G 3.54 . DP=5;AF1=0.4998;CI95=0.5,0.5;DP4=2,1,1,0;MQ=48;PV4=1,1,0,1 PL:DP:SP:GT:GQ 31,0,69:4:0:0/1:34 | |
| 12516 chr11 7961470 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12517 chr11 7981135 . t tGTA 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,66:3:0:0/1:44 | |
| 12518 chr11 7981301 . AAGGA AA 3.25 . INDEL;DP=9;AF1=0.5;CI95=0.5,0.5;DP4=3,0,0,1;MQ=50;PV4=0.25,0.46,1,1 PL:DP:SP:GT:GQ 38,0,109:4:0:0/1:41 | |
| 12519 chr11 7984701 . G T,C 5.29 . DP=12;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=46 PL:DP:SP:GT:GQ 56,27,37,21,0,37:4:0:1/1:49 | |
| 12520 chr11 7984712 . C A 26.1 . DP=10;AF1=0.505;CI95=0.5,0.5;DP4=1,0,3,0;MQ=45;PV4=1,0.16,0.1,1 PL:DP:SP:GT:GQ 56,0,17:4:0:0/1:20 | |
| 12521 chr11 8005127 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 12522 chr11 8009241 . C A 17.8 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47 PL:DP:SP:GT:GQ 49,6,0:2:0:1/1:49 | |
| 12523 chr11 8015977 . T C 14.3 . DP=11;AF1=0.5207;CI95=0.5,1;DP4=1,0,3,0;MQ=49;PV4=1,0.4,0.26,0.47 PL:DP:SP:GT:GQ 44,0,11:4:0:0/1:14 | |
| 12524 chr11 8016730 . T C 40 . DP=27;AF1=0.5;CI95=0.5,0.5;DP4=0,21,2,4;MQ=49;PV4=0.043,9.1e-06,2e-05,1 PL:DP:SP:GT:GQ 70,0,237:27:14:0/1:73 | |
| 12525 chr11 8017533 . A T 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12526 chr11 8025655 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12527 chr11 8042074 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12528 chr11 8050704 . a aAAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12529 chr11 8057260 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 12530 chr11 8069276 . A AGGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12531 chr11 8077154 . CT CTGAGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12532 chr11 8080866 . G A 4.61 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=50 PL:DP:SP:GT:GQ 34,6,0:2:0:1/1:49 | |
| 12533 chr11 8089774 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 12534 chr11 8090115 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 12535 chr11 8090534 . G GCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12536 chr11 8092326 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 12537 chr11 8097719 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 12538 chr11 8098681 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 12539 chr11 8099109 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12540 chr11 8107079 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 12541 chr11 8118472 . T C 95 . DP=10;AF1=1;CI95=1,1;DP4=0,0,0,9;MQ=46 PL:DP:SP:GT:GQ 128,27,0:9:0:1/1:99 | |
| 12542 chr11 8119063 . A G 63.1 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,6;MQ=48 PL:DP:SP:GT:GQ 96,18,0:6:0:1/1:90 | |
| 12543 chr11 8122234 . G A 3.02 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12544 chr11 8129847 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 12545 chr11 8133354 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12546 chr11 8133821 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12547 chr11 8150230 . C CGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12548 chr11 8159011 . A C 7.02 . DP=13;AF1=0.5063;CI95=0.5,0.5;DP4=0,1,0,2;MQ=45;PV4=1,0.33,0.29,0.48 PL:DP:SP:GT:GQ 36,0,16:3:0:0/1:19 | |
| 12549 chr11 8174444 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 12550 chr11 8178656 . a aAAACAG 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=49 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 12551 chr11 8196199 . C CGGGAGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12552 chr11 8197441 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12553 chr11 8200141 . t tGTTAA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 12554 chr11 8215608 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12555 chr11 8221242 . GGGTGG GGG 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 12556 chr11 8231245 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12557 chr11 8237489 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12558 chr11 8240137 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 12559 chr11 8262357 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 12560 chr11 8286548 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 12561 chr11 8296375 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12562 chr11 8299462 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12563 chr11 8305945 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12564 chr11 8311753 . T G 6.2 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,44:2:0:0/1:37 | |
| 12565 chr11 8316423 . CCA CCACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12566 chr11 8333400 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 12567 chr11 8346972 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 12568 chr11 8353904 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12569 chr11 8357888 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 12570 chr11 8357998 . GG GGCAAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12571 chr11 8382806 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 12572 chr11 8392061 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12573 chr11 8401500 . G A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 12574 chr11 8406457 . A C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 12575 chr11 8414351 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12576 chr11 8425459 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 12577 chr11 8483335 . G A 23 . DP=13;AF1=0.5;CI95=0.5,0.5;DP4=7,0,5,0;MQ=49;PV4=1,0.0012,0.19,0.049 PL:DP:SP:GT:GQ 53,0,177:12:0:0/1:56 | |
| 12578 chr11 8504975 . C T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 12579 chr11 8528082 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12580 chr11 8538509 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 12581 chr11 8574051 . g gATATAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12582 chr11 8579480 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12583 chr11 8587989 . G C 4.77 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 12584 chr11 8617246 . a aAGTACC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12585 chr11 8617772 . A G 19.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 51,6,0:2:0:1/1:49 | |
| 12586 chr11 8627551 . g gGCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12587 chr11 8634665 . G T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 12588 chr11 8660912 . G GA 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 12589 chr11 8661928 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 12590 chr11 8676238 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 12591 chr11 8676707 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12592 chr11 8680486 . ta tAAa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12593 chr11 8680689 . AC ACGTTGCGC 3.8 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 39,0,44:2:0:0/1:41 | |
| 12594 chr11 8681644 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 12595 chr11 8711646 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12596 chr11 8719041 . A AAAATCCGG 5.08 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,45:3:0:0/1:43 | |
| 12597 chr11 8735662 . G A 18.1 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,3;MQ=49;PV4=1,0.049,0.0033,1 PL:DP:SP:GT:GQ 48,0,88:6:0:0/1:51 | |
| 12598 chr11 8736046 . C T 6.02 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=50 PL:DP:SP:GT:GQ 36,6,0:2:0:1/1:49 | |
| 12599 chr11 8744008 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12600 chr11 8761205 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 12601 chr11 8782152 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12602 chr11 8803162 . tacacacacacacacacacacacacaca tacacacacacacacacaca 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 12603 chr11 8834031 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12604 chr11 8835854 . c cACGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12605 chr11 8837089 . A G 6.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 12606 chr11 8839294 . T TCATCTACG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12607 chr11 8852952 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 12608 chr11 8864306 . A ACT 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 12609 chr11 8888787 . G A 5.46 . DP=3;AF1=0.4999;CI95=0.5,0.5;DP4=0,2,0,1;MQ=48;PV4=1,0.41,0,0.33 PL:DP:SP:GT:GQ 34,0,71:3:0:0/1:37 | |
| 12610 chr11 8890924 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 12611 chr11 8930688 . G C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 12612 chr11 8942999 . G A 99 . DP=53;AF1=0.5;CI95=0.5,0.5;DP4=10,8,16,11;MQ=47;PV4=1,1e-05,2.7e-08,1 PL:DP:SP:GT:GQ 255,0,255:45:0:0/1:99 | |
| 12613 chr11 8946941 . C CCTGAGCTCGTCGGAG 23.2 . INDEL;DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 62,6,0:2:0:1/1:49 | |
| 12614 chr11 8948680 . A T 97 . DP=33;AF1=0.5;CI95=0.5,0.5;DP4=2,11,0,15;MQ=48;PV4=0.21,5.2e-12,9.2e-05,1 PL:DP:SP:GT:GQ 127,0,255:28:7:0/1:99 | |
| 12615 chr11 8950877 . G A 3.54 . DP=12;AF1=0.4998;CI95=0.5,0.5;DP4=3,2,2,0;MQ=48;PV4=1,0.1,0,1 PL:DP:SP:GT:GQ 31,0,161:7:0:0/1:34 | |
| 12616 chr11 8966447 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 12617 chr11 8974800 . TC TCCGGAGCGC 7.36 . INDEL;DP=18;AF1=0.5016;CI95=0.5,0.5;DP4=0,1,0,1;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,22:2:0:0/1:25 | |
| 12618 chr11 8974806 . GT GTT 20.5 . INDEL;DP=21;AF1=0.501;CI95=0.5,0.5;DP4=0,1,0,2;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 58,0,24:3:0:0/1:27 | |
| 12619 chr11 8975202 . CTCA C 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 12620 chr11 9004075 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 12621 chr11 9008221 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12622 chr11 9012931 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 12623 chr11 9024882 . AACCCTC A 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12624 chr11 9038445 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 12625 chr11 9039637 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 12626 chr11 9042569 . T C 51 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=14,3,4,3;MQ=49;PV4=0.31,1.8e-05,6.6e-05,1 PL:DP:SP:GT:GQ 81,0,255:24:5:0/1:84 | |
| 12627 chr11 9048839 . T C 13 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=45 PL:DP:SP:GT:GQ 44,6,0:2:0:1/1:49 | |
| 12628 chr11 9051475 . G C 99 . DP=50;AF1=0.5;CI95=0.5,0.5;DP4=7,14,5,18;MQ=47;PV4=0.5,0.0013,8.5e-29,1 PL:DP:SP:GT:GQ 255,0,255:44:3:0/1:99 | |
| 12629 chr11 9052423 . A C 99 . DP=19;AF1=1;CI95=1,1;DP4=0,0,3,8;MQ=48 PL:DP:SP:GT:GQ 167,33,0:11:0:1/1:99 | |
| 12630 chr11 9068067 . AACA AA 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 12631 chr11 9074612 . T A 38 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=45 PL:DP:SP:GT:GQ 70,9,0:3:0:1/1:63 | |
| 12632 chr11 9077130 . ATT ATTATATCTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12633 chr11 9077584 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 12634 chr11 9100020 . G C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 12635 chr11 9104909 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12636 chr11 9111716 . ca cAAa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12637 chr11 9115414 . G GAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12638 chr11 9115918 . G C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 12639 chr11 9129749 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12640 chr11 9141422 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12641 chr11 9159982 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12642 chr11 9160103 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12643 chr11 9171775 . A G 12.3 . DP=56;AF1=0.5002;CI95=0.5,0.5;DP4=1,1,4,0;MQ=49;PV4=0.33,0.13,0.2,1 PL:DP:SP:GT:GQ 42,0,30:6:0:0/1:33 | |
| 12644 chr11 9173655 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12645 chr11 9183416 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12646 chr11 9192336 . tacacacacacacacacacacacacacaca tacacacacacacacacacacacacaca 17.7 . INDEL;DP=21;AF1=0.5207;CI95=0.5,1;DP4=0,1,0,2;MQ=43;PV4=1,1,0,1 PL:DP:SP:GT:GQ 55,0,11:3:0:0/1:14 | |
| 12647 chr11 9200299 . A G 14.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=44 PL:DP:SP:GT:GQ 46,6,0:2:0:1/1:49 | |
| 12648 chr11 9215003 . TG TGTTTCAGG 5.09 . INDEL;DP=9;AF1=0.501;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,24:3:0:0/1:27 | |
| 12649 chr11 9229146 . C T 34 . DP=27;AF1=0.5;CI95=0.5,0.5;DP4=7,0,0,8;MQ=49;PV4=0.00016,5e-10,8.6e-05,0.26 PL:DP:SP:GT:GQ 64,0,181:15:38:0/1:67 | |
| 12650 chr11 9241353 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 12651 chr11 9305187 . T TCACCTG 7.35 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 12652 chr11 9306598 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12653 chr11 9344405 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12654 chr11 9373391 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 12655 chr11 9394808 . aa aATa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12656 chr11 9417199 . CTATAT CTATATAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12657 chr11 9429705 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12658 chr11 9429763 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12659 chr11 9444220 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12660 chr11 9444222 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12661 chr11 9450109 . TGGA T 9.94 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 12662 chr11 9456149 . c cATAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12663 chr11 9461991 . T C 23 . DP=4;AF1=0.5001;CI95=0.5,0.5;DP4=2,0,2,0;MQ=47;PV4=1,1,0,0.11 PL:DP:SP:GT:GQ 53,0,35:4:0:0/1:38 | |
| 12664 chr11 9462179 . A C 31 . DP=8;AF1=0.5;CI95=0.5,0.5;DP4=0,5,0,3;MQ=47;PV4=1,0.022,0.018,1 PL:DP:SP:GT:GQ 61,0,151:8:0:0/1:64 | |
| 12665 chr11 9463760 . G C 5.29 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 35,6,0:2:0:1/1:49 | |
| 12666 chr11 9466986 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12667 chr11 9474677 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12668 chr11 9483988 . g gGGAGGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12669 chr11 9509969 . CTC CTCCGGTTTTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12670 chr11 9513140 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12671 chr11 9529968 . A T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 12672 chr11 9537917 . C G 3.54 . DP=6;AF1=0.5001;CI95=0.5,0.5;DP4=0,1,0,2;MQ=46;PV4=1,0.49,0.31,1 PL:DP:SP:GT:GQ 31,0,30:3:0:0/1:30 | |
| 12673 chr11 9551556 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12674 chr11 9556177 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12675 chr11 9575289 . t tGTACC 7.52 . INDEL;DP=2;AF1=0.5263;CI95=0.5,1;DP4=1,0,1,0;MQ=37;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,10:2:0:0/1:13 | |
| 12676 chr11 9582449 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12677 chr11 9600010 . G T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 12678 chr11 9603236 . C T 39 . DP=24;AF1=0.5;CI95=0.5,0.5;DP4=2,11,0,8;MQ=49;PV4=0.5,3.1e-09,8.1e-09,1 PL:DP:SP:GT:GQ 69,0,255:21:3:0/1:72 | |
| 12679 chr11 9614574 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 12680 chr11 9625088 . t tGGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12681 chr11 9631810 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12682 chr11 9634070 . CCT C 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 12683 chr11 9646439 . ag aGAGg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12684 chr11 9652760 . C T 7.87 . DP=2;AF1=0.5101;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,14:2:0:0/1:17 | |
| 12685 chr11 9652906 . TAGG T 11.8 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 12686 chr11 9655463 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 12687 chr11 9682122 . T C 12.3 . DP=8;AF1=0.5;CI95=0.5,0.5;DP4=1,3,2,1;MQ=45;PV4=0.49,0.12,0.072,1 PL:DP:SP:GT:GQ 42,0,112:7:3:0/1:45 | |
| 12688 chr11 9690800 . TACTT TACTTGACTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12689 chr11 9696158 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 12690 chr11 9702501 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 12691 chr11 9708877 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12692 chr11 9715843 . T A 18.1 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=3,6,1,3;MQ=47;PV4=1,0.022,0.026,1 PL:DP:SP:GT:GQ 48,0,226:13:0:0/1:51 | |
| 12693 chr11 9715853 . T G 17.1 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=3,2,0,5;MQ=47;PV4=0.17,0.1,0.0038,1 PL:DP:SP:GT:GQ 47,0,112:10:8:0/1:50 | |
| 12694 chr11 9733281 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 12695 chr11 9734945 . A G 30 . DP=4;AF1=0.5;CI95=0.5,0.5;DP4=1,0,3,0;MQ=48;PV4=1,0.045,0.27,0.02 PL:DP:SP:GT:GQ 60,0,38:4:0:0/1:41 | |
| 12696 chr11 9754221 . C T 99 . DP=6;AF1=0.5002;CI95=0.5,0.5;DP4=0,1,0,5;MQ=44;PV4=1,0,0,0.25 PL:DP:SP:GT:GQ 136,0,32:6:0:0/1:35 | |
| 12697 chr11 9755058 . GT GTTAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12698 chr11 9758425 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12699 chr11 9770128 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12700 chr11 9800279 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12701 chr11 9810746 . T C 12.3 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=5,1,0,4;MQ=49;PV4=0.048,0.0025,0.017,1 PL:DP:SP:GT:GQ 42,0,170:10:13:0/1:45 | |
| 12702 chr11 9815426 . G A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 12703 chr11 9819571 . TTTATAATTATAAT TTTATAAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12704 chr11 9824146 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 12705 chr11 9838022 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12706 chr11 9871780 . Agattgattgattgattgattga Agattgattgattgattga 3.25 . INDEL;DP=10;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,1;MQ=50;PV4=1,0.03,1,1 PL:DP:SP:GT:GQ 38,0,114:4:0:0/1:41 | |
| 12707 chr11 9875330 . T C 4.78 . DP=5;AF1=0.5024;CI95=0.5,0.5;DP4=0,1,0,2;MQ=41;PV4=1,0.089,0.055,0.061 PL:DP:SP:GT:GQ 33,0,20:3:0:0/1:23 | |
| 12708 chr11 9875353 . G T 99 . DP=8;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=42 PL:DP:SP:GT:GQ 146,21,0:7:0:1/1:84 | |
| 12709 chr11 9910699 . G T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12710 chr11 9926827 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12711 chr11 9932428 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 12712 chr11 9935398 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 12713 chr11 9950896 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12714 chr11 9978659 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12715 chr11 9980501 . T C 45 . DP=21;AF1=0.5;CI95=0.5,0.5;DP4=2,9,2,7;MQ=50;PV4=1,5.2e-09,0.16,1 PL:DP:SP:GT:GQ 75,0,255:20:0:0/1:78 | |
| 12716 chr11 9982750 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12717 chr11 9983403 . T C 11.3 . DP=4;AF1=0.5;CI95=0.5,0.5;DP4=1,0,3,0;MQ=47;PV4=1,0.0052,0.33,0.36 PL:DP:SP:GT:GQ 41,0,38:4:0:0/1:39 | |
| 12718 chr11 10019730 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12719 chr11 10024311 . A G 46 . DP=26;AF1=0.5;CI95=0.5,0.5;DP4=0,8,0,15;MQ=49;PV4=1,3e-10,0.13,0.35 PL:DP:SP:GT:GQ 76,0,173:23:0:0/1:79 | |
| 12720 chr11 10033969 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12721 chr11 10064611 . C CATG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12722 chr11 10066579 . G C 99 . DP=8;AF1=0.5003;CI95=0.5,0.5;DP4=1,0,5,1;MQ=43;PV4=1,0.11,0.0093,1 PL:DP:SP:GT:GQ 152,0,29:7:0:0/1:32 | |
| 12723 chr11 10135740 . t tCAGAAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12724 chr11 10140085 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12725 chr11 10153200 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 12726 chr11 10161869 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 12727 chr11 10221040 . a aGGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12728 chr11 10225697 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12729 chr11 10295467 . T C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 12730 chr11 10346562 . T C 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12731 chr11 10353540 . CCT CCTGGAAACT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12732 chr11 10354145 . C G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 12733 chr11 10372814 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 12734 chr11 10391700 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 12735 chr11 10393704 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 12736 chr11 10400209 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12737 chr11 10414715 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 12738 chr11 10415299 . T TCCCCA 7.39 . INDEL;DP=2;AF1=0.5063;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,16:2:0:0/1:19 | |
| 12739 chr11 10417649 . G A 6.98 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12740 chr11 10438327 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=47 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12741 chr11 10440237 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12742 chr11 10442972 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12743 chr11 10450733 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12744 chr11 10461831 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12745 chr11 10500926 . C CAGTGGAGCGA 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=48 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 12746 chr11 10508716 . G C 19.1 . DP=10;AF1=0.5008;CI95=0.5,0.5;DP4=2,0,3,0;MQ=48;PV4=1,1,0.15,1 PL:DP:SP:GT:GQ 49,0,25:5:0:0/1:28 | |
| 12747 chr11 10518521 . C T 99 . DP=41;AF1=0.5;CI95=0.5,0.5;DP4=2,17,4,15;MQ=49;PV4=0.66,9.2e-11,0.00015,0.31 PL:DP:SP:GT:GQ 188,0,255:38:2:0/1:99 | |
| 12748 chr11 10518585 . A G 24 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=0,11,0,7;MQ=50;PV4=1,1.6e-08,0.07,1 PL:DP:SP:GT:GQ 54,0,219:18:0:0/1:57 | |
| 12749 chr11 10521850 . G A 67 . DP=10;AF1=1;CI95=1,1;DP4=0,0,0,8;MQ=39 PL:DP:SP:GT:GQ 100,24,0:8:0:1/1:96 | |
| 12750 chr11 10524034 . GG GGAG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 12751 chr11 10525806 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12752 chr11 10526060 . C T 9.31 . DP=16;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 12753 chr11 10533051 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 12754 chr11 10551301 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12755 chr11 10575682 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12756 chr11 10582104 . G A 4.77 . DP=17;AF1=0.4999;CI95=0.5,0.5;DP4=6,3,5,0;MQ=50;PV4=0.26,1.7e-09,1,1 PL:DP:SP:GT:GQ 33,0,255:14:6:0/1:36 | |
| 12757 chr11 10595572 . CTTG CTTGTTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12758 chr11 10595804 . GT GTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12759 chr11 10597797 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 12760 chr11 10609365 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 12761 chr11 10624041 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12762 chr11 10624274 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12763 chr11 10625300 . G T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12764 chr11 10638907 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 12765 chr11 10646522 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 12766 chr11 10666678 . A G 4.86 . DP=2;AF1=0.5162;CI95=0.5,0.5;DP4=0,1,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,12:2:0:0/1:15 | |
| 12767 chr11 10675520 . A C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 12768 chr11 10690127 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12769 chr11 10691467 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12770 chr11 10693525 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12771 chr11 10694441 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12772 chr11 10703067 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 12773 chr11 10719808 . tc tCCACTCc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12774 chr11 10726886 . T TCTACGCCTGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12775 chr11 10734556 . tta t 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 12776 chr11 10740272 . AC ACC 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 12777 chr11 10742730 . aat a 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 12778 chr11 10786142 . C T 30 . DP=27;AF1=0.5;CI95=0.5,0.5;DP4=7,10,3,3;MQ=49;PV4=1,0.00029,0.019,1 PL:DP:SP:GT:GQ 60,0,255:23:0:0/1:63 | |
| 12779 chr11 10791239 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12780 chr11 10791983 . G A 41 . DP=35;AF1=0.5008;CI95=0.5,0.5;DP4=0,1,2,2;MQ=47;PV4=1,0.06,1,1 PL:DP:SP:GT:GQ 71,0,25:5:0:0/1:28 | |
| 12781 chr11 10798106 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 12782 chr11 10800728 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 12783 chr11 10806498 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12784 chr11 10822350 . C T 99 . DP=29;AF1=1;CI95=1,1;DP4=0,1,2,22;MQ=48;PV4=1,1,1,1 PL:DP:SP:GT:GQ 175,58,0:25:0:1/1:99 | |
| 12785 chr11 10823815 . C T 99 . DP=46;AF1=1;CI95=1,1;DP4=1,0,29,8;MQ=47;PV4=1,0.18,0.012,1 PL:DP:SP:GT:GQ 255,83,0:38:0:1/1:99 | |
| 12786 chr11 10828489 . AT ATT 99 . INDEL;DP=18;AF1=1;CI95=1,1;DP4=0,0,0,14;MQ=50 PL:DP:SP:GT:GQ 183,42,0:14:0:1/1:99 | |
| 12787 chr11 10828490 . TAA TAAA 99 . INDEL;DP=16;AF1=1;CI95=1,1;DP4=0,0,0,14;MQ=50 PL:DP:SP:GT:GQ 189,42,0:14:0:1/1:99 | |
| 12788 chr11 10836897 . G C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 12789 chr11 10848394 . GAAGAAA GAAGAAAAGAAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12790 chr11 10871475 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12791 chr11 10872969 . T TAC 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 12792 chr11 10880244 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 12793 chr11 10885673 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12794 chr11 10900519 . C G 4.77 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 12795 chr11 10911457 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12796 chr11 10913158 . ttga tTGAtga 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12797 chr11 10932506 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 12798 chr11 10939482 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12799 chr11 10955501 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12800 chr11 10961986 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 12801 chr11 10967727 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 12802 chr11 10996604 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 12803 chr11 11006050 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 12804 chr11 11006804 . g gGTACTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12805 chr11 11024203 . C CTAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12806 chr11 11024335 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12807 chr11 11030684 . C T 22.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=45 PL:DP:SP:GT:GQ 54,6,0:2:0:1/1:49 | |
| 12808 chr11 11038003 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12809 chr11 11052152 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 12810 chr11 11065405 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 12811 chr11 11083142 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12812 chr11 11092971 . atc aTCTCtc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12813 chr11 11104140 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12814 chr11 11140218 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 12815 chr11 11152463 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 12816 chr11 11156210 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 12817 chr11 11156854 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 12818 chr11 11158118 . T TTTTAGGG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 12819 chr11 11158985 . TCAAA TCAAAACAAA 4.42 . INDEL;DP=11;AF1=0.5;CI95=0.5,0.5;DP4=1,1,2,0;MQ=50;PV4=1,0.28,1,1 PL:DP:SP:GT:GQ 40,0,56:4:0:0/1:43 | |
| 12820 chr11 11158986 . CA CAGAAGA 78.5 . INDEL;DP=10;AF1=0.5;CI95=0.5,0.5;DP4=1,1,3,1;MQ=50;PV4=1,0.4,1,1 PL:DP:SP:GT:GQ 116,0,81:6:0:0/1:84 | |
| 12821 chr11 11159128 . A G 3.01 . DP=5;AF1=0.4997;CI95=0.5,0.5;DP4=1,1,2,0;MQ=49;PV4=1,0.023,0.048,1 PL:DP:SP:GT:GQ 30,0,84:4:0:0/1:33 | |
| 12822 chr11 11162040 . aa aACACa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12823 chr11 11162347 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12824 chr11 11162376 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12825 chr11 11171659 . T C 19.8 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 51,6,0:2:0:1/1:49 | |
| 12826 chr11 11174519 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12827 chr11 11199145 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12828 chr11 11200316 . A ATTCC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 12829 chr11 11235246 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12830 chr11 11252297 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12831 chr11 11273335 . TGTGG T 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12832 chr11 11275889 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12833 chr11 11292977 . GC GCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12834 chr11 11312143 . G A 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 12835 chr11 11314538 . C T 88 . DP=24;AF1=0.5;CI95=0.5,0.5;DP4=6,1,12,0;MQ=47;PV4=0.37,0.0075,0.005,1 PL:DP:SP:GT:GQ 118,0,158:19:0:0/1:99 | |
| 12836 chr11 11321921 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12837 chr11 11327635 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 12838 chr11 11330251 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12839 chr11 11335781 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 12840 chr11 11346056 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12841 chr11 11348828 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 12842 chr11 11354393 . A G 12 . DP=43;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 43,6,0:2:0:1/1:49 | |
| 12843 chr11 11356347 . tca t 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 12844 chr11 11361544 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 12845 chr11 11361647 . TCTCA TCTCAACTCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12846 chr11 11366907 . T C 27.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=46 PL:DP:SP:GT:GQ 59,6,0:2:0:1/1:49 | |
| 12847 chr11 11373631 . C T 80 . DP=8;AF1=0.5;CI95=0.5,0.5;DP4=3,0,3,1;MQ=46;PV4=1,1,0.019,0.38 PL:DP:SP:GT:GQ 110,0,53:7:0:0/1:56 | |
| 12848 chr11 11373633 . GG GGTG 3.25 . INDEL;DP=8;AF1=0.5002;CI95=0.5,0.5;DP4=2,1,1,0;MQ=46;PV4=1,1,1,0.14 PL:DP:SP:GT:GQ 38,0,31:4:0:0/1:33 | |
| 12849 chr11 11374013 . CAAT C 7.35 . INDEL;DP=3;AF1=0.5005;CI95=0.5,0.5;DP4=0,1,0,1;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,27:2:0:0/1:30 | |
| 12850 chr11 11392968 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12851 chr11 11430528 . G A 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12852 chr11 11432556 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 12853 chr11 11444635 . G A 3.41 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=48 PL:DP:SP:GT:GQ 32,6,0:2:0:1/1:49 | |
| 12854 chr11 11478969 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12855 chr11 11485762 . TAATC TAATCTAAGGAATC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12856 chr11 11489027 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 12857 chr11 11490201 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 12858 chr11 11527289 . T G 3.6 . DP=2;AF1=0.5127;CI95=0.5,0.5;DP4=0,1,1,0;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,13:2:0:0/1:16 | |
| 12859 chr11 11536953 . C G 6.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 12860 chr11 11540186 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12861 chr11 11542433 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 12862 chr11 11551331 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12863 chr11 11563874 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 12864 chr11 11574801 . GTT GTTTT 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 12865 chr11 11581547 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12866 chr11 11583329 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 12867 chr11 11589003 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 12868 chr11 11590087 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 12869 chr11 11611230 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 12870 chr11 11631420 . A C 3.06 . DP=2;AF1=0.5099;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,14:2:0:0/1:17 | |
| 12871 chr11 11654296 . C T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 12872 chr11 11672034 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12873 chr11 11678754 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12874 chr11 11681837 . atatg a 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 12875 chr11 11682661 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12876 chr11 11690766 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 12877 chr11 11699788 . C CTCA 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=2,0,0,1;MQ=50;PV4=0.33,1,1,0.35 PL:DP:SP:GT:GQ 41,0,83:3:0:0/1:44 | |
| 12878 chr11 11745410 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12879 chr11 11752126 . T TTCGTGGTTAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12880 chr11 11791977 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 12881 chr11 11814450 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12882 chr11 11818049 . T TACGAGGGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12883 chr11 11888886 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12884 chr11 11905993 . C T 32.5 . DP=12;AF1=1;CI95=0.5,1;DP4=1,0,9,0;MQ=50;PV4=1,1.3e-06,1,1 PL:DP:SP:GT:GQ 64,7,0:10:0:1/1:57 | |
| 12885 chr11 11906160 . T G 4.83 . DP=7;AF1=0.51;CI95=0.5,0.5;DP4=0,1,0,2;MQ=49;PV4=1,0.48,0.33,0.026 PL:DP:SP:GT:GQ 33,0,14:3:0:0/1:17 | |
| 12886 chr11 11919606 . A ATAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12887 chr11 11929828 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12888 chr11 11946318 . t tGTACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12889 chr11 11954713 . G A 7.8 . DP=7;AF1=0.5;CI95=0.5,0.5;DP4=1,1,0,3;MQ=46;PV4=0.4,0.23,0.12,0.23 PL:DP:SP:GT:GQ 37,0,57:5:0:0/1:40 | |
| 12890 chr11 11956708 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12891 chr11 11963500 . C G 6.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 12892 chr11 11971507 . TC TCAC 3.25 . INDEL;DP=13;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,1;MQ=50;PV4=1,1,1,0.26 PL:DP:SP:GT:GQ 38,0,78:4:0:0/1:41 | |
| 12893 chr11 11976628 . G A 50.1 . DP=34;AF1=1;CI95=0.5,1;DP4=0,0,5,1;MQ=49 PL:DP:SP:GT:GQ 83,18,0:6:0:1/1:90 | |
| 12894 chr11 11986379 . G A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 12895 chr11 11988584 . T G 4.77 . DP=21;AF1=0.4999;CI95=0.5,0.5;DP4=2,7,0,4;MQ=49;PV4=1,0.037,0.4,0.26 PL:DP:SP:GT:GQ 33,0,205:13:0:0/1:36 | |
| 12896 chr11 12006668 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 12897 chr11 12010039 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12898 chr11 12014691 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 12899 chr11 12018003 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12900 chr11 12043244 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 12901 chr11 12052967 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 12902 chr11 12089660 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12903 chr11 12090944 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 12904 chr11 12128199 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 12905 chr11 12129789 . G A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 12906 chr11 12154036 . AAA AAACATCGCATAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12907 chr11 12154200 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 12908 chr11 12162078 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12909 chr11 12165418 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 12910 chr11 12184056 . C T 50 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=0,8,0,4;MQ=48;PV4=1,0.0002,0.0028,0.47 PL:DP:SP:GT:GQ 80,0,198:12:0:0/1:83 | |
| 12911 chr11 12190580 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12912 chr11 12195212 . T C 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12913 chr11 12204105 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12914 chr11 12225946 . T G 13.3 . DP=36;AF1=0.5063;CI95=0.5,0.5;DP4=1,0,1,2;MQ=49;PV4=1,0.16,0.24,1 PL:DP:SP:GT:GQ 43,0,16:4:0:0/1:19 | |
| 12915 chr11 12227135 . ag aGGTg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12916 chr11 12229655 . T G 3.41 . DP=29;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 32,6,0:2:0:1/1:49 | |
| 12917 chr11 12229705 . TT TTGATCAT 3.25 . INDEL;DP=9;AF1=0.5;CI95=0.5,0.5;DP4=2,1,0,1;MQ=50;PV4=1,1,1,0.27 PL:DP:SP:GT:GQ 38,0,129:4:0:0/1:41 | |
| 12918 chr11 12229755 . C CTG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 12919 chr11 12231045 . A G 29 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=6,1,6,0;MQ=49;PV4=1,0.1,0.22,1 PL:DP:SP:GT:GQ 59,0,114:13:0:0/1:62 | |
| 12920 chr11 12237273 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12921 chr11 12241626 . A G 27.8 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=44 PL:DP:SP:GT:GQ 59,6,0:2:0:1/1:49 | |
| 12922 chr11 12243366 . C T 3.54 . DP=4;AF1=0.4998;CI95=0.5,0.5;DP4=0,3,0,1;MQ=48;PV4=1,0.24,0.021,1 PL:DP:SP:GT:GQ 31,0,110:4:0:0/1:34 | |
| 12923 chr11 12248515 . T G 27.3 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=50 PL:DP:SP:GT:GQ 60,15,0:5:0:1/1:75 | |
| 12924 chr11 12248766 . A C 42.3 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=49 PL:DP:SP:GT:GQ 75,15,0:5:0:1/1:75 | |
| 12925 chr11 12251732 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12926 chr11 12252716 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 12927 chr11 12265542 . A G 99 . DP=54;AF1=0.5;CI95=0.5,0.5;DP4=13,16,14,6;MQ=47;PV4=0.14,0.00068,2.5e-22,1 PL:DP:SP:GT:GQ 255,0,255:49:8:0/1:99 | |
| 12928 chr11 12271786 . GC GCC 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 12929 chr11 12279937 . T C 9.31 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 12930 chr11 12279981 . A C 5.29 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=44 PL:DP:SP:GT:GQ 35,6,0:2:0:1/1:49 | |
| 12931 chr11 12279983 . A C 19 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=45 PL:DP:SP:GT:GQ 51,9,0:3:0:1/1:63 | |
| 12932 chr11 12280194 . C T 5.29 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 35,6,0:2:0:1/1:49 | |
| 12933 chr11 12285094 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12934 chr11 12288797 . g gTCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12935 chr11 12293807 . A G 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 12936 chr11 12294992 . TA TAAGCAGAGA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 12937 chr11 12303285 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 12938 chr11 12306731 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 12939 chr11 12313887 . C G 49 . DP=29;AF1=0.5013;CI95=0.5,0.5;DP4=0,1,0,7;MQ=49;PV4=1,0.0027,0.26,1 PL:DP:SP:GT:GQ 79,0,23:8:0:0/1:26 | |
| 12940 chr11 12314003 . CTT CTTTTT 5.08 . INDEL;DP=6;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,1,1,0.33 PL:DP:SP:GT:GQ 41,0,83:3:0:0/1:44 | |
| 12941 chr11 12315186 . G A 28 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=6,1,2,2;MQ=49;PV4=0.49,0.011,3.9e-07,1 PL:DP:SP:GT:GQ 58,0,197:11:3:0/1:61 | |
| 12942 chr11 12315848 . C T 70 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=1,6,2,6;MQ=49;PV4=1,2.7e-06,0.007,1 PL:DP:SP:GT:GQ 100,0,205:15:0:0/1:99 | |
| 12943 chr11 12315891 . G A 90 . DP=12;AF1=1;CI95=1,1;DP4=0,0,1,10;MQ=49 PL:DP:SP:GT:GQ 123,33,0:11:0:1/1:99 | |
| 12944 chr11 12329993 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 12945 chr11 12335019 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 12946 chr11 12335036 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12947 chr11 12345459 . C T 99 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=43 PL:DP:SP:GT:GQ 149,15,0:5:0:1/1:75 | |
| 12948 chr11 12355359 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 12949 chr11 12367341 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12950 chr11 12369386 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12951 chr11 12379408 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 12952 chr11 12379792 . G C 4.61 . DP=17;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=50 PL:DP:SP:GT:GQ 34,6,0:2:0:1/1:49 | |
| 12953 chr11 12384466 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 12954 chr11 12411677 . GAGCAG GAG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12955 chr11 12434453 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12956 chr11 12447556 . gat gATAat 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12957 chr11 12490872 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12958 chr11 12496084 . AACCAAG A 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 12959 chr11 12497469 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 12960 chr11 12509078 . g gATGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12961 chr11 12517345 . A C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 12962 chr11 12524561 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 12963 chr11 12531113 . CATGA CA 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 12964 chr11 12536707 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12965 chr11 12545113 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12966 chr11 12557392 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12967 chr11 12562252 . CT CTGT 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 12968 chr11 12571019 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12969 chr11 12573740 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 12970 chr11 12585267 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 12971 chr11 12615695 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12972 chr11 12617523 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 12973 chr11 12618715 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 12974 chr11 12649477 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12975 chr11 12656193 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12976 chr11 12665282 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 12977 chr11 12682401 . tc tCCGAc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 12978 chr11 12690659 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 12979 chr11 12705523 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 12980 chr11 12706587 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 12981 chr11 12716174 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 12982 chr11 12719128 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12983 chr11 12724555 . C G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 12984 chr11 12752977 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 12985 chr11 12771862 . A G 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,36:2:0:0/1:36 | |
| 12986 chr11 12775438 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 12987 chr11 12778105 . T A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 12988 chr11 12781659 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 12989 chr11 12807372 . A T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 12990 chr11 12809659 . C G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 12991 chr11 12818918 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12992 chr11 12825374 . A T 3.62 . DP=2;AF1=0.5161;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,12:2:0:0/1:15 | |
| 12993 chr11 12839392 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 12994 chr11 12844670 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12995 chr11 12847990 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 12996 chr11 12892059 . A C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 12997 chr11 12901654 . G T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 12998 chr11 12903443 . C T 74 . DP=28;AF1=0.5;CI95=0.5,0.5;DP4=8,4,8,3;MQ=50;PV4=1,1.8e-13,0.094,1 PL:DP:SP:GT:GQ 104,0,255:23:0:0/1:99 | |
| 12999 chr11 12904464 . A G 86 . DP=27;AF1=0.5;CI95=0.5,0.5;DP4=16,0,6,0;MQ=48;PV4=1,0.019,0,1 PL:DP:SP:GT:GQ 116,0,234:22:0:0/1:99 | |
| 13000 chr11 12939770 . TT TTAGCGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13001 chr11 12952015 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 13002 chr11 12963642 . ATAC A 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 13003 chr11 12965460 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13004 chr11 12973669 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13005 chr11 12980728 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13006 chr11 12987584 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13007 chr11 13011304 . C A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 13008 chr11 13015417 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13009 chr11 13015669 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13010 chr11 13020573 . AAC AACAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13011 chr11 13056680 . G T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13012 chr11 13064480 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13013 chr11 13075344 . CCAC CCACAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13014 chr11 13099546 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13015 chr11 13101175 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13016 chr11 13102541 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 13017 chr11 13112528 . t tAG 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 13018 chr11 13116984 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13019 chr11 13127283 . A C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 13020 chr11 13133767 . ttg tTGAAGTAtg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13021 chr11 13134859 . T C 6.98 . DP=2;AF1=0.5006;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,26:2:0:0/1:29 | |
| 13022 chr11 13153973 . ct cTATAAAAAt 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=49 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 13023 chr11 13165743 . T C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 13024 chr11 13204157 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13025 chr11 13204958 . C G 13.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 13026 chr11 13208801 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13027 chr11 13218730 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13028 chr11 13229324 . G C 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,0;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 13029 chr11 13231166 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13030 chr11 13237620 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13031 chr11 13241690 . t tGCATATGATCTCTG 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 13032 chr11 13244825 . C A 5.47 . DP=2;AF1=0.5012;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,23:2:0:0/1:26 | |
| 13033 chr11 13249040 . A G 4.77 . DP=3;AF1=0.5007;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,25:2:0:0/1:27 | |
| 13034 chr11 13260531 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13035 chr11 13281515 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 13036 chr11 13287389 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13037 chr11 13293979 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13038 chr11 13297691 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13039 chr11 13308191 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13040 chr11 13309028 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 13041 chr11 13321186 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13042 chr11 13345011 . G A 37.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=43 PL:DP:SP:GT:GQ 69,6,0:2:0:1/1:49 | |
| 13043 chr11 13345684 . gctct gCTctct 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13044 chr11 13392259 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13045 chr11 13392980 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 13046 chr11 13399605 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13047 chr11 13402672 . A C 18.1 . DP=20;AF1=0.5;CI95=0.5,0.5;DP4=1,1,4,0;MQ=48;PV4=0.33,0.1,0.19,1 PL:DP:SP:GT:GQ 48,0,52:6:0:0/1:50 | |
| 13048 chr11 13403843 . taaga tAAGAaaga 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13049 chr11 13407184 . C T 18.1 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=9,0,4,0;MQ=49;PV4=1,1.8e-05,1.2e-07,1 PL:DP:SP:GT:GQ 48,0,207:13:0:0/1:51 | |
| 13050 chr11 13410491 . G T 15.1 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=0,4,3,0;MQ=49;PV4=0.029,0.088,0.047,1 PL:DP:SP:GT:GQ 45,0,107:7:15:0/1:48 | |
| 13051 chr11 13429961 . G C 22.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 54,6,0:2:0:1/1:49 | |
| 13052 chr11 13445149 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13053 chr11 13451612 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=46 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13054 chr11 13485480 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13055 chr11 13486897 . T A 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 13056 chr11 13495104 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13057 chr11 13602229 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13058 chr11 13620211 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13059 chr11 13628485 . cag c 3.25 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13060 chr11 13633569 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13061 chr11 13649965 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13062 chr11 13651544 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13063 chr11 13701253 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13064 chr11 13707156 . T TAAG 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,2,1,0;MQ=50;PV4=0.33,0.14,1,1 PL:DP:SP:GT:GQ 41,0,83:3:0:0/1:44 | |
| 13065 chr11 13717172 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13066 chr11 13720878 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13067 chr11 13733295 . A G 6.98 . DP=5;AF1=0.4999;CI95=0.5,0.5;DP4=2,0,2,0;MQ=48;PV4=1,0.14,0.0099,1 PL:DP:SP:GT:GQ 36,0,54:4:0:0/1:39 | |
| 13068 chr11 13778812 . TGAAA TGAAAGGAAA 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,1,1,0 PL:DP:SP:GT:GQ 41,0,83:3:0:0/1:44 | |
| 13069 chr11 13804332 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13070 chr11 13812532 . tc tCGc 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=46 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 13071 chr11 13833416 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13072 chr11 13837234 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13073 chr11 13855970 . TG TGACG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13074 chr11 13905717 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13075 chr11 13928811 . G A 8.65 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13076 chr11 13953099 . A ATAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13077 chr11 13994413 . ca cAGa 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 13078 chr11 14024427 . a aGGTCT 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 13079 chr11 14035738 . G A 17.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=48 PL:DP:SP:GT:GQ 49,6,0:2:0:1/1:49 | |
| 13080 chr11 14063476 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 13081 chr11 14065882 . gacaca gaca 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13082 chr11 14071053 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 13083 chr11 14118549 . T TCGACAGCGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13084 chr11 14122437 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13085 chr11 14124061 . taca tACaca 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 13086 chr11 14124697 . C A 6.98 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,44:2:0:0/1:38 | |
| 13087 chr11 14142282 . t tCGTTCTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13088 chr11 14148424 . CAG CAGAGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13089 chr11 14160703 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13090 chr11 14170922 . ta tAAa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13091 chr11 14198555 . ctg cTGGtg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13092 chr11 14211076 . A T 6.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13093 chr11 14221748 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 13094 chr11 14227297 . TC TCGC 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 13095 chr11 14230375 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 13096 chr11 14240086 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13097 chr11 14251996 . G A 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 13098 chr11 14263829 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 13099 chr11 14269041 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13100 chr11 14272492 . atggc a 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13101 chr11 14275505 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13102 chr11 14284206 . CATAT CAT 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 13103 chr11 14307106 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13104 chr11 14322089 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13105 chr11 14331932 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 13106 chr11 14332298 . g gGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13107 chr11 14371858 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 13108 chr11 14374411 . cgccc cGCCCTTTgccc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13109 chr11 14378110 . g gTTGAAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13110 chr11 14382719 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13111 chr11 14423908 . AGG A 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 13112 chr11 14438414 . AATAGATAGA AATAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13113 chr11 14451851 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13114 chr11 14467213 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13115 chr11 14469224 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13116 chr11 14481216 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13117 chr11 14491562 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 13118 chr11 14497269 . C T 35.3 . DP=12;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=49 PL:DP:SP:GT:GQ 68,15,0:5:0:1/1:75 | |
| 13119 chr11 14532338 . C T 95.3 . DP=9;AF1=1;CI95=0.5,1;DP4=0,0,4,1;MQ=45 PL:DP:SP:GT:GQ 128,15,0:5:0:1/1:75 | |
| 13120 chr11 14540671 . A G 13.2 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=50 PL:DP:SP:GT:GQ 45,9,0:3:0:1/1:63 | |
| 13121 chr11 14566480 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13122 chr11 14568230 . c cGGA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13123 chr11 14574776 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13124 chr11 14589553 . T G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 13125 chr11 14604882 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 13126 chr11 14608067 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13127 chr11 14632570 . A C 25 . DP=26;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=48 PL:DP:SP:GT:GQ 57,9,0:3:0:1/1:63 | |
| 13128 chr11 14695439 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 13129 chr11 14706241 . G T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 13130 chr11 14710115 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13131 chr11 14731072 . gac gACCCac 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13132 chr11 14752680 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13133 chr11 14759937 . A G 13 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=29 PL:DP:SP:GT:GQ 44,6,0:2:0:1/1:49 | |
| 13134 chr11 14764984 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13135 chr11 14769781 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13136 chr11 14784632 . G C 6.98 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 13137 chr11 14787584 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13138 chr11 14826675 . c cTTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13139 chr11 14837951 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13140 chr11 14877199 . gag gAGTag 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 13141 chr11 14895279 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13142 chr11 14895665 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13143 chr11 14917104 . T C 6.98 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,44:2:0:0/1:38 | |
| 13144 chr11 14939246 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13145 chr11 14947912 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13146 chr11 14961935 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 13147 chr11 14969951 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13148 chr11 14976861 . TT TTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13149 chr11 14980222 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13150 chr11 14989260 . C T 3.01 . DP=3;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,0,2;MQ=48;PV4=0.33,0.014,0.33,1 PL:DP:SP:GT:GQ 30,0,41:3:0:0/1:33 | |
| 13151 chr11 14990404 . A T 64 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=4,0,6,1;MQ=48;PV4=1,0.024,0.0094,1 PL:DP:SP:GT:GQ 94,0,94:11:0:0/1:94 | |
| 13152 chr11 14990456 . C T 41 . DP=24;AF1=0.5;CI95=0.5,0.5;DP4=10,1,8,2;MQ=50;PV4=0.59,6.8e-10,1,1 PL:DP:SP:GT:GQ 71,0,248:21:2:0/1:74 | |
| 13153 chr11 15036272 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13154 chr11 15042376 . G T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13155 chr11 15063334 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 13156 chr11 15096479 . C CACCT 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 13157 chr11 15102754 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13158 chr11 15123339 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 13159 chr11 15126000 . A T 3.98 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 33,6,0:2:0:1/1:49 | |
| 13160 chr11 15131416 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13161 chr11 15147271 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13162 chr11 15148466 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 13163 chr11 15149093 . T TCCGAGCTTAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13164 chr11 15150901 . C A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 13165 chr11 15170686 . G A 61 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=9,3,11,0;MQ=49;PV4=0.22,3.2e-07,0.037,1 PL:DP:SP:GT:GQ 91,0,255:23:7:0/1:94 | |
| 13166 chr11 15170800 . AGGCC A 3.25 . INDEL;DP=6;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,1;MQ=50;PV4=1,1,1,0.39 PL:DP:SP:GT:GQ 38,0,51:4:0:0/1:41 | |
| 13167 chr11 15186254 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13168 chr11 15195919 . t tGTGAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13169 chr11 15197964 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13170 chr11 15197988 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13171 chr11 15199957 . T C 17.1 . DP=20;AF1=0.5016;CI95=0.5,0.5;DP4=0,2,0,6;MQ=50;PV4=1,0.015,0.3,1 PL:DP:SP:GT:GQ 47,0,22:8:0:0/1:25 | |
| 13172 chr11 15203030 . C CGTG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13173 chr11 15204989 . atgtgtgtgtgtgtgt aTGtgtgtgtgtgtgtgt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13174 chr11 15247057 . T C 10.4 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 13175 chr11 15261936 . G T 7.59 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 38,6,0:2:0:1/1:49 | |
| 13176 chr11 15263473 . ctg cTGCGCGTACAtg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13177 chr11 15279318 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13178 chr11 15280884 . A ACAGTCTCTCGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13179 chr11 15283883 . GAGGCAAG GAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13180 chr11 15297221 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13181 chr11 15317049 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13182 chr11 15324664 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13183 chr11 15364031 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13184 chr11 15371197 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13185 chr11 15377131 . AAAGAAGAAG AAAGAAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13186 chr11 15389788 . C T 26.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=45 PL:DP:SP:GT:GQ 58,6,0:2:0:1/1:49 | |
| 13187 chr11 15397902 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13188 chr11 15401307 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13189 chr11 15404780 . A AGGTCTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13190 chr11 15448416 . TTCT TT 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 13191 chr11 15452114 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13192 chr11 15458638 . T C 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,41:2:0:0/1:35 | |
| 13193 chr11 15474995 . CT CTCCAGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13194 chr11 15486774 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13195 chr11 15501875 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 13196 chr11 15502835 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 13197 chr11 15509787 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13198 chr11 15523937 . A C 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13199 chr11 15524488 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13200 chr11 15530598 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13201 chr11 15564029 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 13202 chr11 15569728 . G A,C 7.8 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,2,0;MQ=46 PL:DP:SP:GT:GQ 47,13,37,10,0,37:2:0:1/1:41 | |
| 13203 chr11 15574276 . g gTCTCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13204 chr11 15591823 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13205 chr11 15595581 . T A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 13206 chr11 15603285 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13207 chr11 15604225 . A G 21.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=44 PL:DP:SP:GT:GQ 53,6,0:2:0:1/1:49 | |
| 13208 chr11 15620975 . T TTA 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 13209 chr11 15625303 . C G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 13210 chr11 15627044 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 13211 chr11 15645057 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13212 chr11 15656932 . G A 11.3 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 13213 chr11 15661786 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 13214 chr11 15666538 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13215 chr11 15709062 . g gTGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13216 chr11 15723499 . G GTCC 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 13217 chr11 15740709 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13218 chr11 15744831 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13219 chr11 15747013 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 13220 chr11 15768126 . TT TTGGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13221 chr11 15772306 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13222 chr11 15773296 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13223 chr11 15814065 . C G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 13224 chr11 15825688 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13225 chr11 15829851 . G A 4.61 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=50 PL:DP:SP:GT:GQ 34,6,0:2:0:1/1:49 | |
| 13226 chr11 15847746 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13227 chr11 15851066 . T TATGTGATG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 13228 chr11 15878318 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 13229 chr11 15882104 . A G 31.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=45 PL:DP:SP:GT:GQ 63,6,0:2:0:1/1:49 | |
| 13230 chr11 15897812 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 13231 chr11 15921012 . C T 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 13232 chr11 15922266 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13233 chr11 15925015 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 13234 chr11 15925424 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 13235 chr11 15928650 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 13236 chr11 15935212 . CC CCCGTC 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13237 chr11 15952675 . T TTA 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 13238 chr11 15962184 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13239 chr11 15963918 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13240 chr11 15985504 . t tCTCTCCTCTCACAC 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 13241 chr11 15989671 . AA AAACACCTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13242 chr11 16017166 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13243 chr11 16029931 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 13244 chr11 16042329 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 13245 chr11 16042775 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13246 chr11 16077431 . T G 17.2 . DP=6;AF1=0.5102;CI95=0.5,0.5;DP4=0,1,0,3;MQ=47;PV4=1,0.33,0.41,0.41 PL:DP:SP:GT:GQ 47,0,14:4:0:0/1:17 | |
| 13247 chr11 16091484 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13248 chr11 16094757 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 13249 chr11 16106102 . T G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 13250 chr11 16116451 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 13251 chr11 16136213 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13252 chr11 16140423 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13253 chr11 16141760 . t tGGTGCGCGA 11.8 . INDEL;DP=5;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=49 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 13254 chr11 16169639 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 13255 chr11 16171911 . G GTCATT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13256 chr11 16205673 . CA CATCTCACTGAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13257 chr11 16230335 . atac a 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 13258 chr11 16254182 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13259 chr11 16283752 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13260 chr11 16295558 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13261 chr11 16295573 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13262 chr11 16322971 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13263 chr11 16328099 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13264 chr11 16345507 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13265 chr11 16353240 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13266 chr11 16353251 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13267 chr11 16382672 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 13268 chr11 16405558 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13269 chr11 16409943 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13270 chr11 16424080 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13271 chr11 16425608 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13272 chr11 16441916 . CAG CAGATAAAAAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13273 chr11 16446468 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13274 chr11 16484934 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 13275 chr11 16509389 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 13276 chr11 16558494 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 13277 chr11 16567469 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13278 chr11 16592742 . C CCCTCGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13279 chr11 16613587 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13280 chr11 16615306 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13281 chr11 16620324 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13282 chr11 16668970 . c cTAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13283 chr11 16679795 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13284 chr11 16691582 . t tGCAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13285 chr11 16710529 . t tTGAG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 13286 chr11 16732164 . a aT 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 13287 chr11 16734274 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13288 chr11 16743937 . c cGAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13289 chr11 16784626 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13290 chr11 16797260 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 13291 chr11 16801371 . T G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13292 chr11 16818011 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13293 chr11 16834772 . C G 4.78 . DP=7;AF1=0.5015;CI95=0.5,0.5;DP4=0,2,0,2;MQ=46;PV4=1,1,0.32,1 PL:DP:SP:GT:GQ 33,0,22:4:0:0/1:25 | |
| 13294 chr11 16836002 . TGCC T 6.55 . INDEL;DP=2;AF1=0.5001;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 43,0,32:2:0:0/1:35 | |
| 13295 chr11 16840076 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13296 chr11 16869904 . CCA C 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 13297 chr11 16878970 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13298 chr11 16895760 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13299 chr11 16904771 . TTGGC T 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13300 chr11 16915484 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13301 chr11 16917316 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13302 chr11 16927754 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13303 chr11 16939531 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13304 chr11 16941871 . C G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 13305 chr11 16946134 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13306 chr11 16951007 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13307 chr11 16959153 . tt tTAt 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 13308 chr11 16960064 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13309 chr11 16963400 . TC TCC 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13310 chr11 16969987 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13311 chr11 16984702 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13312 chr11 16990290 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13313 chr11 17001379 . A AG 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 13314 chr11 17016052 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13315 chr11 17021561 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 13316 chr11 17034555 . CCAGTCAGT CCAGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13317 chr11 17048388 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13318 chr11 17048948 . acagg a 5.08 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,44:2:0:0/1:42 | |
| 13319 chr11 17059344 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13320 chr11 17062087 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 13321 chr11 17073813 . TC T 39.6 . INDEL;DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,6;MQ=31 PL:DP:SP:GT:GQ 80,18,0:6:0:1/1:90 | |
| 13322 chr11 17080859 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13323 chr11 17089003 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13324 chr11 17092174 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13325 chr11 17092293 . g gGTCCAGAC 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=49 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 13326 chr11 17096059 . A G 47.3 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=48 PL:DP:SP:GT:GQ 80,15,0:5:0:1/1:75 | |
| 13327 chr11 17111547 . A T 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 13328 chr11 17144308 . T A 3.54 . DP=8;AF1=0.4998;CI95=0.5,0.5;DP4=1,2,1,1;MQ=48;PV4=1,0.49,0,0.35 PL:DP:SP:GT:GQ 31,0,53:5:0:0/1:34 | |
| 13329 chr11 17156715 . GCACACACACACACA GCACACACACACA 45.5 . INDEL;DP=20;AF1=0.5;CI95=0.5,0.5;DP4=1,11,1,2;MQ=50;PV4=0.37,0.25,1,1 PL:DP:SP:GT:GQ 83,0,236:15:4:0/1:86 | |
| 13330 chr11 17172133 . T C 99 . DP=36;AF1=0.5;CI95=0.5,0.5;DP4=2,18,5,8;MQ=49;PV4=0.084,1.6e-10,0.012,1 PL:DP:SP:GT:GQ 131,0,255:33:11:0/1:99 | |
| 13331 chr11 17176578 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13332 chr11 17178501 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13333 chr11 17178507 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 13334 chr11 17193993 . A C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 13335 chr11 17231979 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 13336 chr11 17235810 . T A 4.77 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13337 chr11 17239234 . t tACTATCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13338 chr11 17240238 . A C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 13339 chr11 17242245 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13340 chr11 17250019 . G T,C 9.49 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=44 PL:DP:SP:GT:GQ 41,9,40,0,1,40:4:0:1/1:63 | |
| 13341 chr11 17260427 . T TTTGAACGTGAC 5.08 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,44:2:0:0/1:42 | |
| 13342 chr11 17269008 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 13343 chr11 17316224 . T TGTCACACACTGTCAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13344 chr11 17332571 . C G 32 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=2,4,0,3;MQ=48;PV4=0.5,0.23,0.0033,0.44 PL:DP:SP:GT:GQ 62,0,168:9:3:0/1:65 | |
| 13345 chr11 17339581 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13346 chr11 17340285 . at aTACt 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13347 chr11 17345338 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13348 chr11 17345954 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13349 chr11 17350069 . G T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 13350 chr11 17352600 . AC ACGCC 5.08 . INDEL;DP=6;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,1,1,0.17 PL:DP:SP:GT:GQ 41,0,83:3:0:0/1:44 | |
| 13351 chr11 17355254 . t tCAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13352 chr11 17402978 . C CATCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13353 chr11 17404419 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 13354 chr11 17408630 . C T 99 . DP=36;AF1=1;CI95=1,1;DP4=1,0,21,12;MQ=44;PV4=1,1,0.0029,1 PL:DP:SP:GT:GQ 255,71,0:34:0:1/1:99 | |
| 13355 chr11 17409120 . TTGG T 3.82 . INDEL;DP=3;AF1=0.5025;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 39,0,20:2:0:0/1:23 | |
| 13356 chr11 17409572 . T C 24.5 . DP=13;AF1=0.5718;CI95=0.5,1;DP4=0,1,0,3;MQ=48;PV4=1,1,0.21,1 PL:DP:SP:GT:GQ 54,0,6:4:0:0/1:8 | |
| 13357 chr11 17409804 . T TTGTC 3.25 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=2,1,0,1;MQ=50;PV4=1,0.18,1,0.43 PL:DP:SP:GT:GQ 38,0,129:4:0:0/1:41 | |
| 13358 chr11 17411306 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13359 chr11 17414715 . T C 5.46 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 13360 chr11 17417504 . A G 90.3 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,2,3;MQ=46 PL:DP:SP:GT:GQ 123,15,0:5:0:1/1:75 | |
| 13361 chr11 17418477 . C A 99 . DP=25;AF1=1;CI95=1,1;DP4=0,0,13,5;MQ=49 PL:DP:SP:GT:GQ 190,54,0:18:0:1/1:99 | |
| 13362 chr11 17419582 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13363 chr11 17429536 . T C 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 13364 chr11 17436936 . A G,C 83 . DP=12;AF1=1;CI95=1,1;DP4=0,0,0,11;MQ=47 PL:DP:SP:GT:GQ 116,30,102,0,5,102:11:0:1/1:99 | |
| 13365 chr11 17436951 . C T 13.8 . DP=9;AF1=0.5939;CI95=0.5,1;DP4=0,1,0,3;MQ=46;PV4=1,1,0.22,1 PL:DP:SP:GT:GQ 43,0,5:4:0:0/1:7 | |
| 13366 chr11 17452492 . G A 33 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=2,4,0,6;MQ=49;PV4=0.45,0.014,0.014,1 PL:DP:SP:GT:GQ 63,0,167:12:3:0/1:66 | |
| 13367 chr11 17452561 . ACACTG A 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13368 chr11 17455922 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13369 chr11 17473541 . gc gCTGCTCTc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13370 chr11 17491571 . C T 19.1 . DP=7;AF1=0.5;CI95=0.5,0.5;DP4=3,0,4,0;MQ=49;PV4=1,0,0,0.009 PL:DP:SP:GT:GQ 49,0,107:7:0:0/1:52 | |
| 13371 chr11 17491730 . G A 69.1 . DP=24;AF1=1;CI95=1,1;DP4=0,0,2,5;MQ=48 PL:DP:SP:GT:GQ 102,21,0:7:0:1/1:84 | |
| 13372 chr11 17491831 . C A 63 . DP=21;AF1=1;CI95=1,1;DP4=0,0,0,9;MQ=49 PL:DP:SP:GT:GQ 96,27,0:9:0:1/1:99 | |
| 13373 chr11 17492150 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13374 chr11 17505652 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 13375 chr11 17510281 . AGAGGAG AGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13376 chr11 17515441 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13377 chr11 17517637 . a aGGATGCTG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13378 chr11 17518417 . C A 4.13 . DP=15;AF1=0.4998;CI95=0.5,0.5;DP4=0,5,0,3;MQ=49;PV4=1,0.26,0.23,1 PL:DP:SP:GT:GQ 32,0,62:8:0:0/1:35 | |
| 13379 chr11 17525209 . Gcagga G 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13380 chr11 17526133 . C T 41 . DP=8;AF1=0.5;CI95=0.5,0.5;DP4=2,0,6,0;MQ=48;PV4=1,3.9e-06,0.059,1 PL:DP:SP:GT:GQ 71,0,69:8:0:0/1:70 | |
| 13381 chr11 17526249 . CAGAG CAGAGAG 3.25 . INDEL;DP=15;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,80:4:0:0/1:41 | |
| 13382 chr11 17528231 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13383 chr11 17537705 . G C 63 . DP=5;AF1=0.5;CI95=0.5,0.5;DP4=2,0,3,0;MQ=46;PV4=1,1,0,1 PL:DP:SP:GT:GQ 93,0,51:5:0:0/1:54 | |
| 13384 chr11 17539407 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13385 chr11 17540030 . C CTG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,39:2:0:0/1:41 | |
| 13386 chr11 17547184 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13387 chr11 17547993 . A G 12.3 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=0,9,0,4;MQ=49;PV4=1,0.015,0.055,1 PL:DP:SP:GT:GQ 42,0,182:13:0:0/1:45 | |
| 13388 chr11 17552397 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13389 chr11 17552648 . A T 7.59 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 38,6,0:2:0:1/1:49 | |
| 13390 chr11 17554307 . T C 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,38:2:0:0/1:33 | |
| 13391 chr11 17554805 . T C 44 . DP=38;AF1=0.5;CI95=0.5,0.5;DP4=15,11,8,1;MQ=49;PV4=0.12,6.8e-08,1.1e-06,1 PL:DP:SP:GT:GQ 74,0,255:35:9:0/1:77 | |
| 13392 chr11 17556567 . TCACC TC 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 13393 chr11 17570636 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 13394 chr11 17572121 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13395 chr11 17572237 . CTGTG CTGTGTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13396 chr11 17585979 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13397 chr11 17588921 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13398 chr11 17597354 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13399 chr11 17610712 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13400 chr11 17646678 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13401 chr11 17704506 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13402 chr11 17708730 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13403 chr11 17711378 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13404 chr11 17712155 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13405 chr11 17740053 . c cT 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 13406 chr11 17744819 . A ACAG 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 13407 chr11 17760866 . TG TGGG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13408 chr11 17762634 . T C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 13409 chr11 17763889 . GT GTAT 6.55 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 43,0,42:2:0:0/1:42 | |
| 13410 chr11 17773975 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=46 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13411 chr11 17785690 . a aTTAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13412 chr11 17789786 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 13413 chr11 17790969 . g gACTACA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 13414 chr11 17795726 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13415 chr11 17813524 . A G 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13416 chr11 17838600 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13417 chr11 17842017 . ac aCTc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13418 chr11 17842364 . ga gAGAGAa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13419 chr11 17852056 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13420 chr11 17871155 . C G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 13421 chr11 17886072 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13422 chr11 17890751 . a aCT 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 13423 chr11 17903304 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 13424 chr11 17928394 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13425 chr11 17933597 . T TGGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13426 chr11 17940997 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13427 chr11 17947234 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 13428 chr11 17981047 . C T 99 . DP=42;AF1=1;CI95=1,1;DP4=2,0,5,26;MQ=44;PV4=0.04,1,0.19,0.026 PL:DP:SP:GT:GQ 255,51,0:33:14:1/1:99 | |
| 13429 chr11 18007772 . CT CTCAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13430 chr11 18008040 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13431 chr11 18015575 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 13432 chr11 18017517 . T C 20 . DP=12;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=49 PL:DP:SP:GT:GQ 52,9,0:3:0:1/1:63 | |
| 13433 chr11 18036262 . cc cCTCTCCAc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13434 chr11 18039152 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13435 chr11 18047255 . G T 16.1 . DP=36;AF1=0.5;CI95=0.5,0.5;DP4=0,21,1,11;MQ=50;PV4=0.36,2.3e-13,0.095,1 PL:DP:SP:GT:GQ 46,0,243:33:0:0/1:49 | |
| 13436 chr11 18050772 . ATTT ATTTT 3.8 . INDEL;DP=11;AF1=0.5;CI95=0.5,0.5;DP4=2,3,0,2;MQ=50;PV4=1,1,1,0.17 PL:DP:SP:GT:GQ 39,0,83:7:0:0/1:42 | |
| 13437 chr11 18053404 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13438 chr11 18058567 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 13439 chr11 18059838 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13440 chr11 18088495 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13441 chr11 18105302 . T C 73 . DP=26;AF1=0.5;CI95=0.5,0.5;DP4=0,14,0,8;MQ=48;PV4=1,3e-05,1e-08,1 PL:DP:SP:GT:GQ 103,0,231:22:0:0/1:99 | |
| 13442 chr11 18146897 . a aGTTCGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13443 chr11 18158993 . T C 99 . DP=39;AF1=1;CI95=1,1;DP4=0,0,20,9;MQ=49 PL:DP:SP:GT:GQ 234,87,0:29:0:1/1:99 | |
| 13444 chr11 18158993 . T TC 17.3 . INDEL;DP=39;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=50 PL:DP:SP:GT:GQ 56,6,0:2:0:1/1:49 | |
| 13445 chr11 18160451 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 13446 chr11 18172103 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 13447 chr11 18181629 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13448 chr11 18193117 . CCTGC CC 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 13449 chr11 18194952 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13450 chr11 18195051 . T C 16.3 . DP=33;AF1=0.5263;CI95=0.5,1;DP4=0,1,0,3;MQ=49;PV4=1,1,0.28,1 PL:DP:SP:GT:GQ 46,0,10:4:0:0/1:13 | |
| 13451 chr11 18210575 . A C 10.2 . DP=4;AF1=0.6243;CI95=0.5,1;DP4=1,0,2,0;MQ=48;PV4=1,1,0.27,0.037 PL:DP:SP:GT:GQ 39,0,4:3:0:0/1:6 | |
| 13452 chr11 18216154 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 13453 chr11 18218678 . G A 45 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=4,0,10,0;MQ=49;PV4=1,3.5e-05,0.0011,1 PL:DP:SP:GT:GQ 75,0,87:14:0:0/1:78 | |
| 13454 chr11 18231289 . C A 99 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=1,4,4,2;MQ=47;PV4=0.24,0.00041,1.3e-05,1 PL:DP:SP:GT:GQ 133,0,171:11:6:0/1:99 | |
| 13455 chr11 18231348 . G T 6.2 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=3,0,3,0;MQ=49;PV4=1,0.38,0.28,0.13 PL:DP:SP:GT:GQ 35,0,37:6:0:0/1:36 | |
| 13456 chr11 18231501 . TGA TGAGA 11.8 . INDEL;DP=4;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 13457 chr11 18245120 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 13458 chr11 18253176 . C T 99 . DP=29;AF1=1;CI95=1,1;DP4=1,1,8,15;MQ=45;PV4=1,1,0.011,1 PL:DP:SP:GT:GQ 255,25,0:25:0:1/1:99 | |
| 13459 chr11 18267431 . C T 13.9 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=48 PL:DP:SP:GT:GQ 45,6,0:2:0:1/1:49 | |
| 13460 chr11 18267463 . A G 65 . DP=11;AF1=0.5;CI95=0.5,0.5;DP4=2,0,6,1;MQ=48;PV4=1,0.00017,0.11,1 PL:DP:SP:GT:GQ 95,0,61:9:0:0/1:64 | |
| 13461 chr11 18268485 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 13462 chr11 18280993 . T TAG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 13463 chr11 18295272 . TA TAGCTACATGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13464 chr11 18301374 . G A 13.2 . DP=7;AF1=0.5;CI95=0.5,0.5;DP4=1,0,3,0;MQ=49;PV4=1,0.014,0.33,0.44 PL:DP:SP:GT:GQ 43,0,38:4:0:0/1:40 | |
| 13465 chr11 18308791 . G A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 13466 chr11 18317458 . T A 33 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=8,0,6,0;MQ=49;PV4=1,0.0011,0.052,1 PL:DP:SP:GT:GQ 63,0,186:14:0:0/1:66 | |
| 13467 chr11 18317699 . C T 48 . DP=9;AF1=0.5001;CI95=0.5,0.5;DP4=0,2,0,4;MQ=47;PV4=1,1,0.099,0.24 PL:DP:SP:GT:GQ 78,0,34:6:0:0/1:37 | |
| 13468 chr11 18319022 . TTTGGG TTTGGGATTGGG 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,64:3:0:0/1:44 | |
| 13469 chr11 18322515 . A G 5.46 . DP=3;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,44:2:0:0/1:37 | |
| 13470 chr11 18332889 . A C 10.4 . DP=8;AF1=0.5005;CI95=0.5,0.5;DP4=2,0,3,0;MQ=48;PV4=1,0.23,0.29,1 PL:DP:SP:GT:GQ 40,0,27:5:0:0/1:30 | |
| 13471 chr11 18337925 . t tGC 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 13472 chr11 18353963 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13473 chr11 18361187 . T C 19.1 . DP=16;AF1=0.5001;CI95=0.5,0.5;DP4=0,2,0,3;MQ=47;PV4=1,0.43,0.16,0.09 PL:DP:SP:GT:GQ 49,0,34:5:0:0/1:37 | |
| 13474 chr11 18373878 . A G 4.13 . DP=34;AF1=0.4998;CI95=0.5,0.5;DP4=14,2,0,6;MQ=49;PV4=0.00038,0.018,0.0017,0.33 PL:DP:SP:GT:GQ 32,0,255:22:34:0/1:35 | |
| 13475 chr11 18379446 . CA CACAGAGA 4.42 . INDEL;DP=4;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 13476 chr11 18400824 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 13477 chr11 18425412 . T A 7.89 . DP=6;AF1=0.5128;CI95=0.5,0.5;DP4=0,1,0,2;MQ=48;PV4=1,1,0.26,1 PL:DP:SP:GT:GQ 37,0,13:3:0:0/1:16 | |
| 13478 chr11 18426883 . A ACAACACCC 7.35 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 13479 chr11 18427099 . C A 4.13 . DP=23;AF1=0.4998;CI95=0.5,0.5;DP4=8,2,0,5;MQ=48;PV4=0.007,0.023,0.0011,0.16 PL:DP:SP:GT:GQ 32,0,206:15:22:0/1:35 | |
| 13480 chr11 18428844 . T C 15.1 . DP=3;AF1=0.5001;CI95=0.5,0.5;DP4=0,1,0,2;MQ=47;PV4=1,0.061,0.11,0.41 PL:DP:SP:GT:GQ 45,0,34:3:0:0/1:37 | |
| 13481 chr11 18429587 . GTATTAT GTAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13482 chr11 18467821 . T C 62 . DP=29;AF1=1;CI95=0.5,1;DP4=0,1,10,0;MQ=47;PV4=0.091,0.4,0.12,1 PL:DP:SP:GT:GQ 94,9,0:11:0:1/1:63 | |
| 13483 chr11 18467898 . C A 25 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=1,6,0,6;MQ=50;PV4=1,1.4e-06,0.096,1 PL:DP:SP:GT:GQ 55,0,211:13:0:0/1:58 | |
| 13484 chr11 18471288 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13485 chr11 18471290 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13486 chr11 18478112 . C CAG 37.2 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=50 PL:DP:SP:GT:GQ 76,6,0:2:0:1/1:49 | |
| 13487 chr11 18491099 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 13488 chr11 18498219 . A T 4.13 . DP=2;AF1=0.5001;CI95=0.5,0.5;DP4=0,1,1,0;MQ=48;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,30:2:0:0/1:31 | |
| 13489 chr11 18528486 . T A 4.13 . DP=11;AF1=0.4998;CI95=0.5,0.5;DP4=0,3,0,2;MQ=48;PV4=1,1,0.03,0.3 PL:DP:SP:GT:GQ 32,0,49:5:0:0/1:35 | |
| 13490 chr11 18530625 . A C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 13491 chr11 18531446 . A C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 13492 chr11 18536248 . G C 12.3 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=3,1,3,0;MQ=48;PV4=1,0.27,1,0.036 PL:DP:SP:GT:GQ 42,0,85:7:0:0/1:45 | |
| 13493 chr11 18555807 . T C 3.54 . DP=4;AF1=0.4998;CI95=0.5,0.5;DP4=3,0,1,0;MQ=48;PV4=1,1,0,1 PL:DP:SP:GT:GQ 31,0,89:4:0:0/1:34 | |
| 13494 chr11 18568412 . A T 6.98 . DP=30;AF1=0.4999;CI95=0.5,0.5;DP4=7,2,6,0;MQ=49;PV4=0.49,0.048,0.085,1 PL:DP:SP:GT:GQ 36,0,164:15:3:0/1:39 | |
| 13495 chr11 18592353 . A C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 13496 chr11 18597386 . T TCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13497 chr11 18605269 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13498 chr11 18617184 . C T 4.77 . DP=4;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,2,0;MQ=49;PV4=0.33,0.021,0.17,0.33 PL:DP:SP:GT:GQ 33,0,40:3:0:0/1:35 | |
| 13499 chr11 18630393 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 13500 chr11 18632706 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13501 chr11 18648398 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 13502 chr11 18649791 . T G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 13503 chr11 18650226 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13504 chr11 18721138 . G A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 13505 chr11 18723477 . T C 81 . DP=49;AF1=0.5;CI95=0.5,0.5;DP4=17,8,14,5;MQ=49;PV4=0.75,2.4e-28,0.38,1 PL:DP:SP:GT:GQ 111,0,255:44:1:0/1:99 | |
| 13506 chr11 18731791 . T C 22 . DP=23;AF1=0.5;CI95=0.5,0.5;DP4=12,0,4,0;MQ=49;PV4=1,0.18,8e-05,0.16 PL:DP:SP:GT:GQ 52,0,160:16:0:0/1:55 | |
| 13507 chr11 18732426 . T G 21.5 . DP=23;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=50 PL:DP:SP:GT:GQ 54,12,0:4:0:1/1:72 | |
| 13508 chr11 18735947 . T C 78 . DP=41;AF1=0.5;CI95=0.5,0.5;DP4=12,13,10,2;MQ=49;PV4=0.073,3.2e-07,2.2e-09,1 PL:DP:SP:GT:GQ 108,0,255:37:11:0/1:99 | |
| 13509 chr11 18737308 . C T 7.8 . DP=17;AF1=0.5001;CI95=0.5,0.5;DP4=0,3,0,3;MQ=49;PV4=1,1,0.066,0.099 PL:DP:SP:GT:GQ 37,0,33:6:0:0/1:35 | |
| 13510 chr11 18737310 . T C 3.01 . DP=18;AF1=0.4997;CI95=0.5,0.5;DP4=0,5,0,3;MQ=50;PV4=1,0.044,0.042,1 PL:DP:SP:GT:GQ 30,0,103:8:0:0/1:33 | |
| 13511 chr11 18738281 . C T 99 . DP=64;AF1=0.5;CI95=0.5,0.5;DP4=15,17,13,16;MQ=49;PV4=1,8.2e-23,3.7e-07,0.27 PL:DP:SP:GT:GQ 166,0,255:61:0:0/1:99 | |
| 13512 chr11 18742570 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 13513 chr11 18743461 . G T 5.46 . DP=21;AF1=0.4999;CI95=0.5,0.5;DP4=7,4,0,4;MQ=50;PV4=0.077,0.076,0.00013,0.21 PL:DP:SP:GT:GQ 34,0,195:15:11:0/1:37 | |
| 13514 chr11 18754679 . A G 35 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=8,0,5,0;MQ=49;PV4=1,0.00097,0.0028,0.27 PL:DP:SP:GT:GQ 65,0,190:13:0:0/1:68 | |
| 13515 chr11 18763771 . A G 3.54 . DP=8;AF1=0.4998;CI95=0.5,0.5;DP4=3,0,2,1;MQ=49;PV4=1,0.045,0.34,0.072 PL:DP:SP:GT:GQ 31,0,61:6:0:0/1:34 | |
| 13516 chr11 18764087 . C T 77 . DP=8;AF1=0.5;CI95=0.5,0.5;DP4=1,2,1,4;MQ=46;PV4=1,0.15,0.022,0.21 PL:DP:SP:GT:GQ 107,0,89:8:0:0/1:92 | |
| 13517 chr11 18775969 . ATG A 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 13518 chr11 18792151 . C CCAAATCTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13519 chr11 18796400 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13520 chr11 18813548 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 13521 chr11 18816831 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 13522 chr11 18820422 . G GTTTT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 13523 chr11 18834052 . ac aCCc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13524 chr11 18853336 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 13525 chr11 18856701 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 13526 chr11 18885550 . A G 4.13 . DP=11;AF1=0.4998;CI95=0.5,0.5;DP4=4,4,2,0;MQ=48;PV4=0.47,0.21,0.0043,0.14 PL:DP:SP:GT:GQ 32,0,223:10:3:0/1:35 | |
| 13527 chr11 18893011 . GTTTT GT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13528 chr11 18893056 . T A 37.5 . DP=11;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=48 PL:DP:SP:GT:GQ 70,12,0:4:0:1/1:72 | |
| 13529 chr11 18893774 . T A 4.13 . DP=3;AF1=0.4998;CI95=0.5,0.5;DP4=2,0,0,1;MQ=48;PV4=0.33,0.17,0,0.15 PL:DP:SP:GT:GQ 32,0,83:3:0:0/1:35 | |
| 13530 chr11 18909148 . G A 91 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=0,7,0,7;MQ=46;PV4=1,0.019,3.8e-05,1 PL:DP:SP:GT:GQ 121,0,161:14:0:0/1:99 | |
| 13531 chr11 18910697 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13532 chr11 18955870 . G A 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 13533 chr11 18956168 . C A 36.8 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=43 PL:DP:SP:GT:GQ 68,6,0:2:0:1/1:49 | |
| 13534 chr11 18956334 . T A 9.52 . DP=6;AF1=0.5;CI95=0.5,0.5;DP4=0,3,2,0;MQ=48;PV4=0.1,0.38,0.008,0.34 PL:DP:SP:GT:GQ 39,0,68:5:10:0/1:42 | |
| 13535 chr11 18974145 . ta tAGAGGCAGa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13536 chr11 18978592 . AC ACCC 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=1,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,76:3:0:0/1:44 | |
| 13537 chr11 18994005 . T C 22.8 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=46 PL:DP:SP:GT:GQ 54,6,0:2:0:1/1:49 | |
| 13538 chr11 18995156 . G T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 13539 chr11 19019832 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13540 chr11 19022244 . ct cTGGGAGAATAAt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13541 chr11 19037869 . T TACATGGGTACAGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13542 chr11 19043592 . G C 5.46 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,44:2:0:0/1:37 | |
| 13543 chr11 19046385 . t tCGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13544 chr11 19052906 . G C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 13545 chr11 19059364 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13546 chr11 19060368 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13547 chr11 19077765 . T C 15.1 . DP=14;AF1=1;CI95=0.5,1;DP4=0,0,1,2;MQ=50 PL:DP:SP:GT:GQ 47,9,0:3:0:1/1:63 | |
| 13548 chr11 19081575 . taca ta 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 13549 chr11 19092251 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13550 chr11 19105812 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13551 chr11 19110807 . A G 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 13552 chr11 19118854 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13553 chr11 19124762 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13554 chr11 19146585 . G C 8.65 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13555 chr11 19152593 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13556 chr11 19168381 . G GCTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13557 chr11 19183791 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13558 chr11 19188770 . C A 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,0,1;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 13559 chr11 19191001 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13560 chr11 19195938 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 13561 chr11 19207378 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 13562 chr11 19248519 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13563 chr11 19256250 . C T 81 . DP=25;AF1=1;CI95=1,1;DP4=0,0,22,0;MQ=49 PL:DP:SP:GT:GQ 114,66,0:22:0:1/1:99 | |
| 13564 chr11 19265043 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13565 chr11 19271757 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13566 chr11 19278691 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 13567 chr11 19310276 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13568 chr11 19318699 . t tGGTA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13569 chr11 19328376 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13570 chr11 19347986 . A T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 13571 chr11 19355851 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13572 chr11 19362713 . c cA 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 13573 chr11 19370297 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13574 chr11 19373824 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 13575 chr11 19400656 . agGA a 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13576 chr11 19401160 . CA CAGGAGGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13577 chr11 19416266 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13578 chr11 19418585 . T C 5.46 . DP=3;AF1=0.4999;CI95=0.5,0.5;DP4=1,1,1,0;MQ=48;PV4=1,0.22,0,0.48 PL:DP:SP:GT:GQ 34,0,91:3:0:0/1:37 | |
| 13579 chr11 19446766 . A T 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13580 chr11 19447677 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13581 chr11 19450627 . G T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 13582 chr11 19454766 . T C 52.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=43 PL:DP:SP:GT:GQ 84,6,0:2:0:1/1:49 | |
| 13583 chr11 19463157 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13584 chr11 19464192 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 13585 chr11 19479220 . G C 12 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 43,6,0:2:0:1/1:49 | |
| 13586 chr11 19489958 . C A 4.61 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=49 PL:DP:SP:GT:GQ 34,6,0:2:0:1/1:49 | |
| 13587 chr11 19497832 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13588 chr11 19497845 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13589 chr11 19502131 . T TCTGTGTCGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13590 chr11 19505786 . G A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 13591 chr11 19506437 . AC ACC 3.25 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13592 chr11 19510904 . T TGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13593 chr11 19528039 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13594 chr11 19528141 . aata aa 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13595 chr11 19539073 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13596 chr11 19541043 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 13597 chr11 19549684 . C CAT 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 13598 chr11 19551661 . T A 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13599 chr11 19555218 . T A 3.54 . DP=3;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,0,1;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,41:2:0:0/1:34 | |
| 13600 chr11 19574197 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 13601 chr11 19576852 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13602 chr11 19586160 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13603 chr11 19640380 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13604 chr11 19680109 . C A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 13605 chr11 19691499 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 13606 chr11 19699618 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 13607 chr11 19701630 . G C 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,43:2:0:0/1:36 | |
| 13608 chr11 19704009 . a aAG 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 13609 chr11 19709360 . GC GCTAC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 13610 chr11 19721309 . T TTTTCG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13611 chr11 19733657 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13612 chr11 19735746 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13613 chr11 19745361 . C A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 13614 chr11 19746368 . C A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 13615 chr11 19771818 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13616 chr11 19785867 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13617 chr11 19792279 . ta tAGTCa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13618 chr11 19832856 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13619 chr11 19835642 . T C 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 13620 chr11 19847155 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13621 chr11 19856325 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13622 chr11 19864856 . T G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 13623 chr11 19865594 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13624 chr11 19901369 . G A 12 . DP=14;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 43,6,0:2:0:1/1:49 | |
| 13625 chr11 19909976 . GAT GATAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13626 chr11 19921355 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 13627 chr11 19926085 . T C 7.8 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 13628 chr11 19926245 . A T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 13629 chr11 19926814 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13630 chr11 19926915 . TCC TCCC 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13631 chr11 19929070 . TAGG T 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13632 chr11 19955470 . C A 4.13 . DP=19;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,4;MQ=50;PV4=0.2,0.00033,0.34,0.21 PL:DP:SP:GT:GQ 32,0,37:5:0:0/1:34 | |
| 13633 chr11 19970558 . T C 96.3 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,3,2;MQ=44 PL:DP:SP:GT:GQ 129,15,0:5:0:1/1:75 | |
| 13634 chr11 19970579 . C T 3.02 . DP=4;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13635 chr11 19975640 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13636 chr11 19987231 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13637 chr11 19992797 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 13638 chr11 19994142 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13639 chr11 20005845 . GCCC GCC 17.5 . INDEL;DP=24;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,3;MQ=50;PV4=1,0.0032,1,1 PL:DP:SP:GT:GQ 55,0,46:5:0:0/1:48 | |
| 13640 chr11 20052106 . TG TGCTCCAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13641 chr11 20054591 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 13642 chr11 20055614 . TGC TGCGTGCGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13643 chr11 20083219 . G GCAC 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 13644 chr11 20099112 . A T 99 . DP=24;AF1=0.5;CI95=0.5,0.5;DP4=8,6,6,3;MQ=48;PV4=1,0.0066,9.9e-06,0.18 PL:DP:SP:GT:GQ 186,0,255:23:0:0/1:99 | |
| 13645 chr11 20101704 . C T 62 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=4,6,5,3;MQ=49;PV4=0.64,4.2e-08,0.022,1 PL:DP:SP:GT:GQ 92,0,255:18:2:0/1:95 | |
| 13646 chr11 20101744 . C A 58.1 . DP=10;AF1=0.5163;CI95=0.5,1;DP4=0,1,2,2;MQ=47;PV4=1,1,0.17,1 PL:DP:SP:GT:GQ 88,0,12:5:0:0/1:15 | |
| 13647 chr11 20104087 . T G 4.14 . DP=9;AF1=0.5014;CI95=0.5,0.5;DP4=0,1,2,0;MQ=48;PV4=0.33,0.21,0.077,1 PL:DP:SP:GT:GQ 32,0,22:3:0:0/1:25 | |
| 13648 chr11 20112649 . G A 39 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=0,6,0,4;MQ=48;PV4=1,0.18,0.005,1 PL:DP:SP:GT:GQ 69,0,132:10:0:0/1:72 | |
| 13649 chr11 20119160 . G A 3.54 . DP=50;AF1=0.4998;CI95=0.5,0.5;DP4=4,23,9,0;MQ=50;PV4=7.6e-06,2.3e-07,0.00014,1 PL:DP:SP:GT:GQ 31,0,255:36:51:0/1:34 | |
| 13650 chr11 20124914 . A C 99 . DP=59;AF1=1;CI95=1,1;DP4=0,0,26,23;MQ=49 PL:DP:SP:GT:GQ 209,148,0:49:0:1/1:99 | |
| 13651 chr11 20126852 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13652 chr11 20129075 . G A 29 . DP=7;AF1=0.5;CI95=0.5,0.5;DP4=4,0,2,0;MQ=48;PV4=1,1,0,1 PL:DP:SP:GT:GQ 59,0,96:6:0:0/1:62 | |
| 13653 chr11 20129427 . A G 21 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=0,10,0,5;MQ=49;PV4=1,3.7e-07,0.0057,0.41 PL:DP:SP:GT:GQ 51,0,215:15:0:0/1:54 | |
| 13654 chr11 20131113 . G A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 13655 chr11 20131427 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13656 chr11 20172467 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13657 chr11 20172475 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13658 chr11 20178076 . G C 3.01 . DP=7;AF1=0.4998;CI95=0.5,0.5;DP4=3,0,2,0;MQ=49;PV4=1,0.22,0,0.4 PL:DP:SP:GT:GQ 30,0,59:5:0:0/1:33 | |
| 13659 chr11 20180716 . A T 8.87 . DP=8;AF1=0.5336;CI95=0.5,1;DP4=1,0,2,0;MQ=46;PV4=1,1,0.17,1 PL:DP:SP:GT:GQ 38,0,9:3:0:0/1:12 | |
| 13660 chr11 20181233 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 13661 chr11 20189046 . G A 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 13662 chr11 20209793 . CCACA CCA 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13663 chr11 20221107 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 13664 chr11 20222259 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13665 chr11 20222271 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13666 chr11 20224535 . t tAA 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 13667 chr11 20239034 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13668 chr11 20243053 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=46 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13669 chr11 20254711 . C A 8.65 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13670 chr11 20277535 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13671 chr11 20287689 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13672 chr11 20300553 . c cAACTCTCAG 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=49 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 13673 chr11 20322675 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13674 chr11 20393207 . ac aCc 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13675 chr11 20394686 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13676 chr11 20403825 . A T 30 . DP=12;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=48 PL:DP:SP:GT:GQ 62,9,0:3:0:1/1:63 | |
| 13677 chr11 20404757 . T C 22.2 . DP=21;AF1=0.5263;CI95=0.5,1;DP4=0,1,0,4;MQ=49;PV4=1,0.22,0.26,1 PL:DP:SP:GT:GQ 52,0,10:5:0:0/1:13 | |
| 13678 chr11 20410980 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 13679 chr11 20416368 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13680 chr11 20419028 . T C 49 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=45 PL:DP:SP:GT:GQ 81,9,0:3:0:1/1:63 | |
| 13681 chr11 20419110 . A G 24 . DP=24;AF1=0.5;CI95=0.5,0.5;DP4=0,3,4,0;MQ=48;PV4=0.029,0.035,0.048,1 PL:DP:SP:GT:GQ 54,0,63:7:15:0/1:56 | |
| 13682 chr11 20429454 . T C 10.4 . DP=11;AF1=1;CI95=0.5,1;DP4=0,0,2,1;MQ=50 PL:DP:SP:GT:GQ 42,9,0:3:0:1/1:63 | |
| 13683 chr11 20443204 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13684 chr11 20474602 . A ACC 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 13685 chr11 20529886 . G A 99 . DP=33;AF1=1;CI95=1,1;DP4=0,0,5,6;MQ=48 PL:DP:SP:GT:GQ 168,33,0:11:0:1/1:99 | |
| 13686 chr11 20554737 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13687 chr11 20596536 . a aTTAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13688 chr11 20596656 . T A 87 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=6,3,5,2;MQ=44;PV4=1,0.0065,0.31,1 PL:DP:SP:GT:GQ 117,0,217:16:0:0/1:99 | |
| 13689 chr11 20599888 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13690 chr11 20614559 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13691 chr11 20617903 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13692 chr11 20621588 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13693 chr11 20623156 . C G 45.5 . DP=19;AF1=1;CI95=0.5,1;DP4=0,0,2,2;MQ=49 PL:DP:SP:GT:GQ 78,12,0:4:0:1/1:72 | |
| 13694 chr11 20624180 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13695 chr11 20625081 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 13696 chr11 20625235 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13697 chr11 20626996 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13698 chr11 20634833 . A G 18.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=46 PL:DP:SP:GT:GQ 50,6,0:2:0:1/1:49 | |
| 13699 chr11 20639400 . A G 99 . DP=49;AF1=1;CI95=1,1;DP4=0,0,11,32;MQ=43 PL:DP:SP:GT:GQ 255,129,0:43:0:1/1:99 | |
| 13700 chr11 20639449 . CTAAG CTAAGTAAG 99 . INDEL;DP=35;AF1=0.5;CI95=0.5,0.5;DP4=4,14,0,9;MQ=50;PV4=0.27,0.49,1,0.45 PL:DP:SP:GT:GQ 157,0,255:27:6:0/1:99 | |
| 13701 chr11 20639465 . A C 19.1 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=1,13,0,7;MQ=50;PV4=1,1.5e-10,0.081,1 PL:DP:SP:GT:GQ 49,0,255:21:0:0/1:52 | |
| 13702 chr11 20639606 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13703 chr11 20642150 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 13704 chr11 20646344 . G C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 13705 chr11 20647887 . TG TGCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13706 chr11 20649726 . A G 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 13707 chr11 20654807 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13708 chr11 20655002 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 13709 chr11 20664418 . T TACCCC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 13710 chr11 20667481 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13711 chr11 20674347 . C G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 13712 chr11 20676253 . T C 6.2 . DP=39;AF1=0.4999;CI95=0.5,0.5;DP4=11,4,3,3;MQ=50;PV4=0.35,0.0006,0.0087,1 PL:DP:SP:GT:GQ 35,0,255:21:5:0/1:38 | |
| 13713 chr11 20680136 . C CGGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13714 chr11 20685373 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13715 chr11 20705344 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13716 chr11 20705443 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 13717 chr11 20712919 . a aCCTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13718 chr11 20716596 . cat cATTGTAGACATat 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13719 chr11 20728763 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13720 chr11 20728912 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13721 chr11 20738382 . G T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 13722 chr11 20741451 . ta tAa 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 13723 chr11 20744264 . ca cACAa 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 13724 chr11 20762013 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13725 chr11 20789255 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 13726 chr11 20803567 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13727 chr11 20873786 . C T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 13728 chr11 20879665 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13729 chr11 20895306 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13730 chr11 20895406 . C A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 13731 chr11 20911090 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 13732 chr11 20922787 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 13733 chr11 20940760 . ca cAGGTa 3.25 . INDEL;DP=4;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13734 chr11 20959465 . C A 99 . DP=32;AF1=0.5;CI95=0.5,0.5;DP4=0,17,0,13;MQ=46;PV4=1,0.31,4.3e-15,0.45 PL:DP:SP:GT:GQ 171,0,234:30:0:0/1:99 | |
| 13735 chr11 20959482 . G C 82 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=0,12,0,10;MQ=45;PV4=1,2.7e-07,2.1e-14,1 PL:DP:SP:GT:GQ 112,0,221:22:0:0/1:99 | |
| 13736 chr11 20961699 . C A 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13737 chr11 20968956 . G C 85 . DP=38;AF1=0.5;CI95=0.5,0.5;DP4=9,15,8,4;MQ=49;PV4=0.16,2.9e-12,0.00017,1 PL:DP:SP:GT:GQ 115,0,255:36:8:0/1:99 | |
| 13738 chr11 20981893 . AT ATGT 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13739 chr11 21005890 . G A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 13740 chr11 21021331 . A C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 13741 chr11 21027662 . G GT 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 13742 chr11 21029926 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13743 chr11 21036337 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13744 chr11 21049393 . A ATAGTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13745 chr11 21052700 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 13746 chr11 21073934 . ctt cTTtt 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,41:2:0:0/1:42 | |
| 13747 chr11 21080184 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 13748 chr11 21136042 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13749 chr11 21177282 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 13750 chr11 21203022 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 13751 chr11 21229402 . tt tTGCAt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13752 chr11 21230710 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13753 chr11 21237645 . a aTGT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 13754 chr11 21238823 . A C 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 13755 chr11 21250840 . G C 9.52 . DP=13;AF1=0.5;CI95=0.5,0.5;DP4=6,0,3,0;MQ=48;PV4=1,0.16,0.25,1 PL:DP:SP:GT:GQ 39,0,114:9:0:0/1:42 | |
| 13756 chr11 21265290 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13757 chr11 21274436 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13758 chr11 21276181 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13759 chr11 21280100 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13760 chr11 21287302 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 13761 chr11 21299217 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13762 chr11 21321190 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13763 chr11 21343768 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 13764 chr11 21347987 . T A 7.94 . DP=3;AF1=0.5206;CI95=0.5,1;DP4=0,1,2,0;MQ=46;PV4=0.33,1,1,1 PL:DP:SP:GT:GQ 37,0,11:3:0:0/1:14 | |
| 13765 chr11 21352116 . T C 3.98 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=49 PL:DP:SP:GT:GQ 33,6,0:2:0:1/1:49 | |
| 13766 chr11 21365041 . c cCACTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13767 chr11 21373504 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13768 chr11 21395220 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13769 chr11 21403238 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13770 chr11 21443159 . C T 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13771 chr11 21448761 . ct cTAt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13772 chr11 21459207 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13773 chr11 21461899 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 13774 chr11 21465398 . t tTCCCGA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13775 chr11 21471791 . C A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 13776 chr11 21480816 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13777 chr11 21490773 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 13778 chr11 21502816 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13779 chr11 21523828 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13780 chr11 21575497 . AGTCATT A 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13781 chr11 21580128 . A AGAAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13782 chr11 21581665 . C T 75.3 . DP=18;AF1=0.543;CI95=0.5,1;DP4=1,0,12,1;MQ=47;PV4=1,7.5e-09,0.037,1 PL:DP:SP:GT:GQ 105,0,8:14:0:0/1:11 | |
| 13783 chr11 21590221 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13784 chr11 21591600 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 13785 chr11 21592567 . C T 3.54 . DP=10;AF1=0.4998;CI95=0.5,0.5;DP4=1,3,0,3;MQ=49;PV4=1,0.03,0.14,0.4 PL:DP:SP:GT:GQ 31,0,125:7:0:0/1:34 | |
| 13786 chr11 21617691 . G T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 13787 chr11 21639415 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 13788 chr11 21644881 . CAG CAGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13789 chr11 21663174 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13790 chr11 21688242 . G T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13791 chr11 21705106 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13792 chr11 21713329 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13793 chr11 21749197 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 13794 chr11 21749669 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13795 chr11 21752091 . ta tAGCAGAa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13796 chr11 21762017 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13797 chr11 21804090 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13798 chr11 21824532 . c cTAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13799 chr11 21829908 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13800 chr11 21861151 . a aC 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 13801 chr11 21897080 . TAACAAA TAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13802 chr11 21911918 . A C 5.46 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 13803 chr11 21943301 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13804 chr11 21943540 . t tGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13805 chr11 21971355 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 13806 chr11 21977288 . t tTGTGAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13807 chr11 21988702 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13808 chr11 21992765 . C CCGGGGCGCAA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 13809 chr11 21993126 . A G 39.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=43 PL:DP:SP:GT:GQ 71,6,0:2:0:1/1:49 | |
| 13810 chr11 21993994 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13811 chr11 21999341 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13812 chr11 22029474 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 13813 chr11 22054813 . C T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 13814 chr11 22067744 . A AGCAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13815 chr11 22068550 . aa aAGAGGAGa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13816 chr11 22088686 . G A 6.98 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,37:2:0:0/1:36 | |
| 13817 chr11 22095807 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13818 chr11 22101159 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 13819 chr11 22102827 . caaa c 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 13820 chr11 22117510 . T TATATAGAAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13821 chr11 22122307 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13822 chr11 22126101 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13823 chr11 22168759 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13824 chr11 22173249 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13825 chr11 22186171 . T TC 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 13826 chr11 22186604 . gg gGTCCg 12.7 . INDEL;DP=5;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13827 chr11 22196962 . ga gATCAa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13828 chr11 22207300 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13829 chr11 22225426 . TTATA TTATATA 5.08 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,68:3:0:0/1:44 | |
| 13830 chr11 22232365 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13831 chr11 22237325 . G T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13832 chr11 22242729 . T C 99 . DP=17;AF1=0.6671;CI95=0.5,1;DP4=0,2,1,7;MQ=45;PV4=1,1,0.00022,1 PL:DP:SP:GT:GQ 156,0,3:10:0:0/1:5 | |
| 13833 chr11 22260976 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13834 chr11 22294550 . T G 44 . DP=21;AF1=0.5;CI95=0.5,0.5;DP4=0,5,0,7;MQ=49;PV4=1,0.16,0.058,1 PL:DP:SP:GT:GQ 74,0,79:12:0:0/1:76 | |
| 13835 chr11 22296094 . CTTTTTTTTTTT CTTTTTTT 99 . INDEL;DP=18;AF1=0.5008;CI95=0.5,0.5;DP4=2,0,12,0;MQ=50;PV4=1,0.065,1,0.42 PL:DP:SP:GT:GQ 143,0,25:14:0:0/1:28 | |
| 13836 chr11 22301061 . G A 79 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=2,0,6,0;MQ=46;PV4=1,0.0021,0.0048,1 PL:DP:SP:GT:GQ 109,0,69:8:0:0/1:72 | |
| 13837 chr11 22316590 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 13838 chr11 22334571 . A C 99 . DP=30;AF1=1;CI95=1,1;DP4=1,0,3,25;MQ=28;PV4=0.14,0.22,1,1 PL:DP:SP:GT:GQ 170,73,0:29:0:1/1:99 | |
| 13839 chr11 22338426 . c cTG 5.08 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 13840 chr11 22340041 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 13841 chr11 22343538 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13842 chr11 22360046 . A T 36.5 . DP=10;AF1=0.8277;CI95=0.5,1;DP4=1,0,4,0;MQ=48;PV4=1,1,0.15,0.098 PL:DP:SP:GT:GQ 65,0,1:5:0:1/1:5 | |
| 13843 chr11 22411318 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 13844 chr11 22414313 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 13845 chr11 22422941 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 13846 chr11 22426765 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13847 chr11 22441077 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13848 chr11 22448931 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 13849 chr11 22451209 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13850 chr11 22486266 . C T 13 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 44,6,0:2:0:1/1:49 | |
| 13851 chr11 22487271 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13852 chr11 22490475 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13853 chr11 22514061 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13854 chr11 22541570 . G T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13855 chr11 22551893 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13856 chr11 22551915 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13857 chr11 22552685 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 13858 chr11 22562153 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 13859 chr11 22631562 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13860 chr11 22631577 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13861 chr11 22641936 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13862 chr11 22659731 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13863 chr11 22660391 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13864 chr11 22708880 . a aGGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13865 chr11 22716006 . CT CTCAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13866 chr11 22743357 . T TAGAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13867 chr11 22747772 . G C 4.13 . DP=9;AF1=0.4998;CI95=0.5,0.5;DP4=2,0,2,0;MQ=49;PV4=1,0.21,0.092,0.45 PL:DP:SP:GT:GQ 32,0,47:4:0:0/1:35 | |
| 13868 chr11 22780818 . TTCC TTCCTCC 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 13869 chr11 22795151 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13870 chr11 22795242 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13871 chr11 22815843 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13872 chr11 22819059 . AGG AGGGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13873 chr11 22832432 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13874 chr11 22840055 . gcat g 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 13875 chr11 22846999 . CAG C 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 13876 chr11 22894124 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13877 chr11 22921998 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13878 chr11 22927273 . g gACT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13879 chr11 22938587 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13880 chr11 22947042 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 13881 chr11 22955537 . AT ATTCTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13882 chr11 22960566 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13883 chr11 22969422 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13884 chr11 22972840 . GGG GGGTAGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13885 chr11 22984610 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13886 chr11 22989401 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13887 chr11 22995649 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13888 chr11 23024261 . accc a 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 13889 chr11 23032159 . GA GACA 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 13890 chr11 23041824 . GGC GGCGC 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 13891 chr11 23044741 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13892 chr11 23048950 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13893 chr11 23060638 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13894 chr11 23071295 . A C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13895 chr11 23095704 . G A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 13896 chr11 23124639 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13897 chr11 23125504 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13898 chr11 23135095 . C T 12 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 43,6,0:2:0:1/1:49 | |
| 13899 chr11 23136906 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13900 chr11 23170764 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13901 chr11 23203964 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13902 chr11 23213572 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13903 chr11 23214937 . C G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 13904 chr11 23215091 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13905 chr11 23238557 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13906 chr11 23261797 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13907 chr11 23264280 . AAA AAAATCATCAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13908 chr11 23268396 . aaca aACaca 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13909 chr11 23274578 . a aT 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 13910 chr11 23276308 . T TCCAAAGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13911 chr11 23314659 . a aTT 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 13912 chr11 23326007 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13913 chr11 23331148 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13914 chr11 23364416 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 13915 chr11 23380982 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13916 chr11 23415024 . A G 9.31 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 13917 chr11 23426036 . G C 20.1 . DP=7;AF1=0.5102;CI95=0.5,0.5;DP4=1,0,3,0;MQ=48;PV4=1,0.34,0.37,1 PL:DP:SP:GT:GQ 50,0,14:4:0:0/1:17 | |
| 13918 chr11 23426277 . T C 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13919 chr11 23426794 . C A 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13920 chr11 23427674 . C CAT 5.08 . INDEL;DP=6;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,1,1,0.46 PL:DP:SP:GT:GQ 41,0,73:3:0:0/1:44 | |
| 13921 chr11 23446103 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 13922 chr11 23487493 . t tATGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13923 chr11 23491101 . G T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 13924 chr11 23501120 . A G 58.5 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,2,2;MQ=48 PL:DP:SP:GT:GQ 91,12,0:4:0:1/1:72 | |
| 13925 chr11 23501342 . T C 50 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=44 PL:DP:SP:GT:GQ 82,9,0:3:0:1/1:63 | |
| 13926 chr11 23509178 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13927 chr11 23512916 . C T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 13928 chr11 23514259 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13929 chr11 23524554 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 13930 chr11 23531725 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13931 chr11 23535337 . A G 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,0;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,42:2:0:0/1:34 | |
| 13932 chr11 23542057 . G A 5.46 . DP=3;AF1=0.4999;CI95=0.5,0.5;DP4=2,0,1,0;MQ=48;PV4=1,0.015,0,0.41 PL:DP:SP:GT:GQ 34,0,83:3:0:0/1:37 | |
| 13933 chr11 23542087 . C CTCTCAA 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=48;PV4=1,1,1,0.38 PL:DP:SP:GT:GQ 41,0,59:3:0:0/1:44 | |
| 13934 chr11 23546433 . AA AAACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13935 chr11 23580318 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 13936 chr11 23604360 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13937 chr11 23701483 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13938 chr11 23702312 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 13939 chr11 23703159 . A AGAACAAG 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 13940 chr11 23732306 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13941 chr11 23766584 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13942 chr11 23800836 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13943 chr11 23805933 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13944 chr11 23809037 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 13945 chr11 23810855 . T C 21.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 53,6,0:2:0:1/1:49 | |
| 13946 chr11 23846611 . CAA C 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13947 chr11 23915140 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13948 chr11 24009029 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 13949 chr11 24049852 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 13950 chr11 24063445 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13951 chr11 24079126 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13952 chr11 24097694 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13953 chr11 24142843 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13954 chr11 24144266 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 13955 chr11 24144283 . T G 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13956 chr11 24145033 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13957 chr11 24194051 . C G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 13958 chr11 24197589 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 13959 chr11 24207505 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 13960 chr11 24218194 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13961 chr11 24223461 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13962 chr11 24226929 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 13963 chr11 24241923 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13964 chr11 24250378 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13965 chr11 24317105 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13966 chr11 24330977 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13967 chr11 24333315 . A C 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13968 chr11 24335279 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 13969 chr11 24359003 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13970 chr11 24395866 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13971 chr11 24398667 . ac aCTGCTc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 13972 chr11 24402780 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13973 chr11 24413815 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13974 chr11 24420704 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 13975 chr11 24490670 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13976 chr11 24524841 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 13977 chr11 24529744 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 13978 chr11 24542253 . C A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 13979 chr11 24565349 . C T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 13980 chr11 24565726 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 13981 chr11 24589273 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13982 chr11 24594237 . TC TCGC 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13983 chr11 24612525 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13984 chr11 24612546 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 13985 chr11 24618459 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 13986 chr11 24628292 . a aGGTGACATCC 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 13987 chr11 24633553 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13988 chr11 24666209 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 13989 chr11 24668649 . C T 6.3 . DP=2;AF1=0.5162;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,12:2:0:0/1:15 | |
| 13990 chr11 24703160 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13991 chr11 24712274 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13992 chr11 24720482 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13993 chr11 24724253 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13994 chr11 24727249 . CACTA C 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 13995 chr11 24730315 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 13996 chr11 24732304 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 13997 chr11 24750842 . G A 49 . DP=31;AF1=0.5;CI95=0.5,0.5;DP4=1,1,2,5;MQ=49;PV4=1,0.011,0.41,1 PL:DP:SP:GT:GQ 79,0,48:9:0:0/1:51 | |
| 13998 chr11 24752480 . A T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 13999 chr11 24756665 . T TC 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14000 chr11 24784922 . G T 6.98 . DP=4;AF1=0.4999;CI95=0.5,0.5;DP4=0,2,0,2;MQ=48;PV4=1,0.28,0.22,1 PL:DP:SP:GT:GQ 36,0,51:4:0:0/1:39 | |
| 14001 chr11 24869239 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 14002 chr11 24874244 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14003 chr11 24879635 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14004 chr11 24886696 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 14005 chr11 24891859 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14006 chr11 24904175 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14007 chr11 24964947 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 14008 chr11 24971022 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14009 chr11 24990308 . G A 30.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=43 PL:DP:SP:GT:GQ 62,6,0:2:0:1/1:49 | |
| 14010 chr11 25004848 . C G 6.98 . DP=20;AF1=0.4999;CI95=0.5,0.5;DP4=2,5,0,4;MQ=50;PV4=0.49,0.005,0.14,1 PL:DP:SP:GT:GQ 36,0,204:11:3:0/1:39 | |
| 14011 chr11 25053237 . t tCGAACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14012 chr11 25058167 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14013 chr11 25071562 . A G 20 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=4,0,2,0;MQ=48;PV4=1,0.16,1.5e-05,0.32 PL:DP:SP:GT:GQ 50,0,124:6:0:0/1:53 | |
| 14014 chr11 25087043 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14015 chr11 25088640 . A G 5.46 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14016 chr11 25093802 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14017 chr11 25151627 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14018 chr11 25201803 . ac aCCAGCc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14019 chr11 25206627 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14020 chr11 25229322 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14021 chr11 25261105 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14022 chr11 25261115 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14023 chr11 25283883 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14024 chr11 25284914 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14025 chr11 25308858 . G T 4.19 . DP=2;AF1=0.5127;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,13:2:0:0/1:16 | |
| 14026 chr11 25309047 . A G 12.3 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 14027 chr11 25322776 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14028 chr11 25331749 . G A 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14029 chr11 25367561 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14030 chr11 25371313 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14031 chr11 25388596 . c cTTATA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14032 chr11 25391310 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14033 chr11 25414457 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 14034 chr11 25432771 . C G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 14035 chr11 25434084 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14036 chr11 25471880 . G C 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,1;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 14037 chr11 25475049 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14038 chr11 25495817 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14039 chr11 25509822 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14040 chr11 25531350 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14041 chr11 25560308 . G A 10.4 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 14042 chr11 25570498 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14043 chr11 25588023 . c cAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14044 chr11 25588573 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14045 chr11 25616654 . CTCATCAA C 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=46 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 14046 chr11 25618062 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14047 chr11 25635442 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 14048 chr11 25637428 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14049 chr11 25637666 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14050 chr11 25652386 . CT CTGT 7.35 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 14051 chr11 25671871 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14052 chr11 25748644 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14053 chr11 25755014 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14054 chr11 25773131 . T TAAACTCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14055 chr11 25789853 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14056 chr11 25804427 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14057 chr11 25815548 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14058 chr11 25818934 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14059 chr11 25860966 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14060 chr11 25881979 . AAT AATAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14061 chr11 25890007 . ga gACa 6.55 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 43,0,44:2:0:0/1:43 | |
| 14062 chr11 25891895 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14063 chr11 25912387 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14064 chr11 25917061 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14065 chr11 25928358 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14066 chr11 25937602 . TAGCAGCAG TAGCAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14067 chr11 25950732 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14068 chr11 25956395 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14069 chr11 25956998 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14070 chr11 25970167 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14071 chr11 25975052 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14072 chr11 25975289 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14073 chr11 25982048 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14074 chr11 26017320 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14075 chr11 26055754 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14076 chr11 26056173 . cc cCAc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14077 chr11 26067594 . C T 73.1 . DP=7;AF1=1;CI95=1,1;DP4=0,0,7,0;MQ=48 PL:DP:SP:GT:GQ 106,21,0:7:0:1/1:84 | |
| 14078 chr11 26069400 . C G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 14079 chr11 26076496 . a aGTCCGTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14080 chr11 26101212 . agtt a 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14081 chr11 26111785 . T A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 14082 chr11 26141448 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14083 chr11 26175541 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14084 chr11 26177813 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14085 chr11 26223220 . A ACTG 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 14086 chr11 26266584 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14087 chr11 26294443 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 14088 chr11 26314480 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14089 chr11 26319452 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14090 chr11 26328429 . ATTT ATTTT 27.2 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=50 PL:DP:SP:GT:GQ 66,6,0:2:0:1/1:49 | |
| 14091 chr11 26362396 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14092 chr11 26374217 . C CTCTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14093 chr11 26381158 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14094 chr11 26395853 . CACA C 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 14095 chr11 26399928 . t tCCGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14096 chr11 26404143 . G GCCGCACA 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=49 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 14097 chr11 26447495 . CT CTGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14098 chr11 26456368 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 14099 chr11 26484496 . G C 18.1 . DP=3;AF1=0.504;CI95=0.5,0.5;DP4=1,0,2,0;MQ=46;PV4=1,1,0.14,1 PL:DP:SP:GT:GQ 48,0,18:3:0:0/1:21 | |
| 14100 chr11 26518066 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14101 chr11 26539431 . TGC T 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 14102 chr11 26540441 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14103 chr11 26549746 . A G 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,38:2:0:0/1:35 | |
| 14104 chr11 26552702 . T C 65.4 . DP=8;AF1=0.5554;CI95=0.5,1;DP4=1,0,5,0;MQ=46;PV4=1,1,0.085,1 PL:DP:SP:GT:GQ 95,0,7:6:0:0/1:10 | |
| 14105 chr11 26568966 . A G 99 . DP=58;AF1=0.5;CI95=0.5,0.5;DP4=11,12,19,11;MQ=50;PV4=0.28,1.4e-23,0.07,1 PL:DP:SP:GT:GQ 139,0,255:53:6:0/1:99 | |
| 14106 chr11 26569553 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 14107 chr11 26587133 . T C 99 . DP=39;AF1=0.5;CI95=0.5,0.5;DP4=5,16,1,12;MQ=47;PV4=0.37,7.7e-14,1.1e-12,0.42 PL:DP:SP:GT:GQ 200,0,255:34:4:0/1:99 | |
| 14108 chr11 26607823 . AG AGGG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14109 chr11 26613012 . G T 3.02 . DP=2;AF1=0.5004;CI95=0.5,0.5;DP4=0,1,0,1;MQ=38;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,26:2:0:0/1:28 | |
| 14110 chr11 26619872 . T C 3.54 . DP=4;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,2,0;MQ=49;PV4=1,0,0,0.094 PL:DP:SP:GT:GQ 31,0,41:3:0:0/1:34 | |
| 14111 chr11 26621776 . c cCGGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14112 chr11 26621968 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14113 chr11 26623004 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14114 chr11 26625220 . GTCTC GTC 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 14115 chr11 26626207 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14116 chr11 26646065 . TTC TTCTC 5.08 . INDEL;DP=9;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,76:3:0:0/1:44 | |
| 14117 chr11 26669187 . A AGCATAGCAGG 7.44 . INDEL;DP=8;AF1=0.5128;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,13:2:0:0/1:16 | |
| 14118 chr11 26669189 . TAA T 4.42 . INDEL;DP=7;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 14119 chr11 26669190 . A G 5.76 . DP=6;AF1=0.5553;CI95=0.5,1;DP4=1,0,2,0;MQ=45;PV4=1,1,0.32,1 PL:DP:SP:GT:GQ 34,0,7:3:0:0/1:10 | |
| 14120 chr11 26685059 . AA AACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14121 chr11 26690703 . t tGCGGCCATGCGAAC 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 14122 chr11 26692742 . G A 99 . DP=44;AF1=0.5;CI95=0.5,0.5;DP4=9,20,3,7;MQ=48;PV4=1,0.044,1.7e-09,1 PL:DP:SP:GT:GQ 182,0,255:39:0:0/1:99 | |
| 14123 chr11 26692777 . C T 91 . DP=47;AF1=0.5;CI95=0.5,0.5;DP4=9,20,4,10;MQ=49;PV4=1,2.6e-12,1.3e-08,1 PL:DP:SP:GT:GQ 121,0,255:43:0:0/1:99 | |
| 14124 chr11 26692811 . C G 81 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=0,8,0,7;MQ=48;PV4=1,0.011,5.8e-05,1 PL:DP:SP:GT:GQ 111,0,178:15:0:0/1:99 | |
| 14125 chr11 26694979 . A G 5.46 . DP=30;AF1=0.4999;CI95=0.5,0.5;DP4=6,11,4,3;MQ=50;PV4=0.39,8.6e-17,1,1 PL:DP:SP:GT:GQ 34,0,255:24:4:0/1:37 | |
| 14126 chr11 26702664 . C T 57.1 . DP=11;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=49 PL:DP:SP:GT:GQ 90,21,0:7:0:1/1:84 | |
| 14127 chr11 26704921 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14128 chr11 26718434 . C A 54.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=43 PL:DP:SP:GT:GQ 86,6,0:2:0:1/1:49 | |
| 14129 chr11 26721512 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 14130 chr11 26742881 . ATGA ATGACTACTGA 5.08 . INDEL;DP=8;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,1,1,0.45 PL:DP:SP:GT:GQ 41,0,83:3:0:0/1:44 | |
| 14131 chr11 26755406 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14132 chr11 26755415 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14133 chr11 26758628 . C G 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14134 chr11 26758643 . A T 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14135 chr11 26775308 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14136 chr11 26775322 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14137 chr11 26840124 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14138 chr11 26845890 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 14139 chr11 26851254 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14140 chr11 26864985 . C T 6.2 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,44:2:0:0/1:37 | |
| 14141 chr11 26875712 . G GACTTGAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14142 chr11 26921241 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14143 chr11 26930268 . G A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 14144 chr11 26934796 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14145 chr11 26938547 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14146 chr11 26953052 . A ACGG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14147 chr11 26960005 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14148 chr11 26963793 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14149 chr11 26984659 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14150 chr11 26995366 . T A 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 14151 chr11 27008800 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14152 chr11 27009956 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14153 chr11 27018422 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 14154 chr11 27032994 . AT ATCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14155 chr11 27037057 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14156 chr11 27077118 . C T 60 . DP=26;AF1=0.5025;CI95=0.5,0.5;DP4=1,1,2,3;MQ=47;PV4=1,1,0.057,1 PL:DP:SP:GT:GQ 90,0,20:7:0:0/1:23 | |
| 14157 chr11 27114788 . C T 99 . DP=46;AF1=1;CI95=1,1;DP4=0,0,17,24;MQ=48 PL:DP:SP:GT:GQ 255,123,0:41:0:1/1:99 | |
| 14158 chr11 27149043 . T G 19.1 . DP=17;AF1=0.5001;CI95=0.5,0.5;DP4=0,2,0,6;MQ=47;PV4=1,0.16,0.23,1 PL:DP:SP:GT:GQ 49,0,33:8:0:0/1:36 | |
| 14159 chr11 27150995 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14160 chr11 27151006 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14161 chr11 27159220 . TG TGACGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14162 chr11 27170459 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 14163 chr11 27175217 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14164 chr11 27203860 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14165 chr11 27214448 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14166 chr11 27247496 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14167 chr11 27250643 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14168 chr11 27253314 . A T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 14169 chr11 27253697 . G A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 14170 chr11 27262585 . A C 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 14171 chr11 27307538 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14172 chr11 27325462 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 14173 chr11 27331770 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 14174 chr11 27335038 . TT TTGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14175 chr11 27379126 . C A 5.46 . DP=16;AF1=0.5002;CI95=0.5,0.5;DP4=0,2,0,2;MQ=48;PV4=1,1,0.092,0.012 PL:DP:SP:GT:GQ 34,0,29:4:0:0/1:31 | |
| 14176 chr11 27390089 . T C 84.2 . DP=40;AF1=1;CI95=0.5,1;DP4=1,0,2,7;MQ=48;PV4=0.3,1,0.23,1 PL:DP:SP:GT:GQ 117,16,0:10:0:1/1:80 | |
| 14177 chr11 27392072 . CT CTGTGT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 14178 chr11 27395371 . G A 13.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 14179 chr11 27400404 . T A 44.1 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,6;MQ=49 PL:DP:SP:GT:GQ 77,18,0:6:0:1/1:90 | |
| 14180 chr11 27406844 . G A 99 . DP=19;AF1=1;CI95=1,1;DP4=1,0,8,7;MQ=47;PV4=1,0.31,0.045,1 PL:DP:SP:GT:GQ 194,22,0:16:0:1/1:88 | |
| 14181 chr11 27412797 . t tGGCTTCA 3.25 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,38:2:0:0/1:38 | |
| 14182 chr11 27426747 . T TTTCCGGGAA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14183 chr11 27447228 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14184 chr11 27451377 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14185 chr11 27463742 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14186 chr11 27482684 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14187 chr11 27482689 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14188 chr11 27497313 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14189 chr11 27513574 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14190 chr11 27546921 . t tCA 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 14191 chr11 27549042 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14192 chr11 27561256 . C G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 14193 chr11 27571240 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14194 chr11 27600138 . atgat a 3.85 . INDEL;DP=2;AF1=0.5101;CI95=0.5,0.5;DP4=0,1,1,0;MQ=38;PV4=1,1,1,1 PL:DP:SP:GT:GQ 39,0,14:2:0:0/1:17 | |
| 14195 chr11 27631405 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14196 chr11 27638879 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14197 chr11 27644281 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14198 chr11 27644574 . A G 6.79 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=49 PL:DP:SP:GT:GQ 37,6,0:2:0:1/1:49 | |
| 14199 chr11 27658871 . c cAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14200 chr11 27667460 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14201 chr11 27677453 . AA AATA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14202 chr11 27679662 . T C 51.4 . DP=57;AF1=0.5554;CI95=0.5,1;DP4=0,1,2,4;MQ=48;PV4=1,0.17,0.3,1 PL:DP:SP:GT:GQ 81,0,7:7:0:0/1:10 | |
| 14203 chr11 27739764 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14204 chr11 27745799 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14205 chr11 27760748 . CCA CCACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14206 chr11 27768968 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14207 chr11 27772703 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14208 chr11 27828431 . C A 3.02 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14209 chr11 27830908 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14210 chr11 27833075 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14211 chr11 27841029 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14212 chr11 27855547 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14213 chr11 27858277 . A AGAACT 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14214 chr11 27860211 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14215 chr11 27871847 . AT ATTTGGGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14216 chr11 27877622 . CA CAGACTACTAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14217 chr11 27881655 . C A 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 14218 chr11 27893050 . C G 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,41:2:0:0/1:34 | |
| 14219 chr11 27893229 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14220 chr11 27897872 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14221 chr11 27904466 . c cGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14222 chr11 27908505 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14223 chr11 27911965 . TC TCAAC 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 14224 chr11 27932376 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 14225 chr11 27935757 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14226 chr11 27937958 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14227 chr11 27975503 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14228 chr11 27977466 . cc cCCGGCAc 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 14229 chr11 28032193 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14230 chr11 28034224 . C G 14.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 14231 chr11 28036179 . T TGGCTGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14232 chr11 28057957 . T C 99 . DP=34;AF1=0.5;CI95=0.5,0.5;DP4=9,8,4,7;MQ=49;PV4=0.46,8.3e-07,7.8e-05,1 PL:DP:SP:GT:GQ 151,0,255:28:3:0/1:99 | |
| 14233 chr11 28110151 . T C 3.54 . DP=18;AF1=0.4998;CI95=0.5,0.5;DP4=1,5,1,1;MQ=48;PV4=0.46,0.035,0.12,1 PL:DP:SP:GT:GQ 31,0,178:8:3:0/1:34 | |
| 14234 chr11 28131156 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14235 chr11 28134862 . T TTC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 14236 chr11 28141412 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 14237 chr11 28148702 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14238 chr11 28166550 . AG AGGAACAGG 10.8 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 14239 chr11 28166593 . T TGGTTGGC 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14240 chr11 28170775 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14241 chr11 28176234 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14242 chr11 28176242 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14243 chr11 28181445 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14244 chr11 28185062 . G A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 14245 chr11 28252264 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14246 chr11 28263528 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14247 chr11 28270738 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14248 chr11 28311891 . AGG A 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14249 chr11 28322767 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14250 chr11 28348713 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14251 chr11 28357178 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14252 chr11 28370821 . ATCT ATCTTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14253 chr11 28437115 . g gATCA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14254 chr11 28449399 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14255 chr11 28494168 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14256 chr11 28497485 . A T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 14257 chr11 28498546 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14258 chr11 28504107 . A AGAACG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14259 chr11 28513457 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14260 chr11 28540697 . G A 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14261 chr11 28540702 . T C 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14262 chr11 28564817 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14263 chr11 28574063 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14264 chr11 28585620 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14265 chr11 28615224 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14266 chr11 28615368 . G T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 14267 chr11 28649870 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 14268 chr11 28698983 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14269 chr11 28711406 . G T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 14270 chr11 28748104 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 14271 chr11 28774275 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14272 chr11 28774294 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14273 chr11 28782067 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14274 chr11 28782731 . cag c 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=48 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 14275 chr11 28819346 . a aGTATGAATATG 10.8 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=48 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 14276 chr11 28841565 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14277 chr11 28849623 . C G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 14278 chr11 28876200 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14279 chr11 28876220 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14280 chr11 28878433 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 14281 chr11 28886478 . C CAAAAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14282 chr11 28890896 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14283 chr11 28911452 . AT ATT 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 14284 chr11 28920744 . C CGGAATTAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14285 chr11 28924750 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14286 chr11 28924761 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14287 chr11 28932351 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14288 chr11 28948098 . G A 14.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=48 PL:DP:SP:GT:GQ 46,6,0:2:0:1/1:49 | |
| 14289 chr11 28958948 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14290 chr11 29011529 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 14291 chr11 29020929 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14292 chr11 29066322 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14293 chr11 29119434 . G A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 14294 chr11 29197295 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 14295 chr11 29215686 . TCCC TCC 22.2 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=50 PL:DP:SP:GT:GQ 61,6,0:2:0:1/1:49 | |
| 14296 chr11 29250992 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14297 chr11 29290740 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14298 chr11 29303372 . GT GTAT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 14299 chr11 29306047 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14300 chr11 29309014 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14301 chr11 29312362 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14302 chr11 29312377 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14303 chr11 29335422 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14304 chr11 29364489 . G GTCCCCT 7.35 . INDEL;DP=2;AF1=0.5004;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,28:2:0:0/1:31 | |
| 14305 chr11 29365687 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14306 chr11 29383608 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14307 chr11 29430709 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14308 chr11 29443093 . ag aGTg 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 14309 chr11 29445486 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14310 chr11 29452204 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14311 chr11 29481198 . A ATGGTTCCGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14312 chr11 29484379 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 14313 chr11 29505780 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14314 chr11 29510939 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14315 chr11 29524660 . g gCACGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14316 chr11 29539865 . G GCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14317 chr11 29540005 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14318 chr11 29552398 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14319 chr11 29572684 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14320 chr11 29574070 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14321 chr11 29601840 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14322 chr11 29604184 . G A 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,35:2:0:0/1:33 | |
| 14323 chr11 29617219 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14324 chr11 29619317 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14325 chr11 29633126 . AATCATCA AATCATCATCATCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14326 chr11 29635219 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14327 chr11 29644458 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14328 chr11 29686996 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14329 chr11 29687024 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14330 chr11 29715561 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14331 chr11 29729616 . T TGCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14332 chr11 29744740 . A C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14333 chr11 29747926 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14334 chr11 29762216 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14335 chr11 29762235 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14336 chr11 29798548 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14337 chr11 29805550 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14338 chr11 29811727 . T G 5.46 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14339 chr11 29822115 . GTCTT G 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 14340 chr11 29826627 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14341 chr11 29878603 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 14342 chr11 29892334 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14343 chr11 29912014 . G C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 14344 chr11 29913236 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14345 chr11 29924903 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14346 chr11 29940822 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14347 chr11 29948632 . TC TCACC 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 14348 chr11 29961110 . tc tCGc 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 14349 chr11 29980856 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14350 chr11 29983217 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14351 chr11 30028211 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14352 chr11 30036227 . C A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14353 chr11 30039329 . C A 14.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47 PL:DP:SP:GT:GQ 46,6,0:2:0:1/1:49 | |
| 14354 chr11 30048464 . AGTGTG A 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14355 chr11 30067142 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14356 chr11 30092373 . TC TCAGC 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14357 chr11 30103737 . A G 15.9 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=46 PL:DP:SP:GT:GQ 47,6,0:2:0:1/1:49 | |
| 14358 chr11 30123566 . G A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 14359 chr11 30147515 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 14360 chr11 30177055 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14361 chr11 30228258 . cagt cAGTGACTagt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14362 chr11 30249836 . GCA GCACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14363 chr11 30255185 . C T 90 . DP=39;AF1=0.5;CI95=0.5,0.5;DP4=12,11,6,6;MQ=49;PV4=1,1.5e-09,0.00081,0.42 PL:DP:SP:GT:GQ 120,0,255:35:0:0/1:99 | |
| 14364 chr11 30265152 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 14365 chr11 30275411 . A C 4.77 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14366 chr11 30278663 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14367 chr11 30278804 . G A 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 14368 chr11 30303274 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14369 chr11 30321382 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14370 chr11 30321415 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14371 chr11 30321849 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14372 chr11 30352473 . CGG CAGGG 7.35 . INDEL;DP=6;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,41:2:0:0/1:42 | |
| 14373 chr11 30352754 . AA AACACCGTA 3.25 . INDEL;DP=7;AF1=0.5;CI95=0.5,0.5;DP4=2,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,129:4:0:0/1:41 | |
| 14374 chr11 30356416 . ct cTTAt 5.79 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 42,0,44:2:0:0/1:43 | |
| 14375 chr11 30365956 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14376 chr11 30366211 . G T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 14377 chr11 30373013 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14378 chr11 30379894 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14379 chr11 30383754 . C CCTGCTAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14380 chr11 30406671 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14381 chr11 30409417 . C G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 14382 chr11 30421466 . TC TCTGGGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14383 chr11 30433223 . T TGACAAC 3.25 . INDEL;DP=6;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,1;MQ=50;PV4=1,1,1,0.44 PL:DP:SP:GT:GQ 38,0,97:4:0:0/1:41 | |
| 14384 chr11 30435662 . aa aATTTGa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14385 chr11 30449191 . AAT AATGTGTAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14386 chr11 30451017 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 14387 chr11 30454787 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14388 chr11 30455780 . G A 6.22 . DP=2;AF1=0.5031;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,19:2:0:0/1:22 | |
| 14389 chr11 30459125 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14390 chr11 30465942 . A T 5.46 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14391 chr11 30471129 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14392 chr11 30486857 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14393 chr11 30487159 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14394 chr11 30514260 . CTAAATAAA CTAAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14395 chr11 30545790 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14396 chr11 30584774 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14397 chr11 30594256 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14398 chr11 30604994 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14399 chr11 30605929 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 14400 chr11 30630439 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 14401 chr11 30634318 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14402 chr11 30635217 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14403 chr11 30639073 . G GTTGCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14404 chr11 30660939 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 14405 chr11 30668879 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14406 chr11 30688003 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14407 chr11 30713878 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14408 chr11 30723177 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14409 chr11 30723203 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14410 chr11 30765432 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 14411 chr11 30772122 . G GACT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14412 chr11 30808642 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14413 chr11 30830205 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14414 chr11 30853599 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 14415 chr11 30885039 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14416 chr11 30894672 . TC TCCCTCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14417 chr11 30896546 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14418 chr11 30902141 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 14419 chr11 30915584 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14420 chr11 30918014 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14421 chr11 30923848 . a aGATACAGGTTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14422 chr11 30935766 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 14423 chr11 30940529 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14424 chr11 30959027 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 14425 chr11 30982324 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14426 chr11 30993962 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14427 chr11 30996540 . a aCGGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14428 chr11 31009925 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14429 chr11 31029975 . A ATC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14430 chr11 31050859 . AC ACCCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14431 chr11 31052084 . CA CAA 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14432 chr11 31052450 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14433 chr11 31078667 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14434 chr11 31106342 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14435 chr11 31106646 . T A 14.2 . DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,1,2,1;MQ=49;PV4=1,0,0,1 PL:DP:SP:GT:GQ 44,0,38:4:0:0/1:40 | |
| 14436 chr11 31117890 . TGTTA T 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 14437 chr11 31125039 . CAT CATCGAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14438 chr11 31136817 . T TGA 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 14439 chr11 31152073 . G C 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 14440 chr11 31164681 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14441 chr11 31232236 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14442 chr11 31241113 . G GCTA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14443 chr11 31244069 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14444 chr11 31249468 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 14445 chr11 31253612 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14446 chr11 31257753 . C CTGACTA 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 14447 chr11 31267765 . GC GCTACCCTCGAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14448 chr11 31282982 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 14449 chr11 31286472 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 14450 chr11 31295951 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14451 chr11 31298726 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 14452 chr11 31313942 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14453 chr11 31327316 . C T 27 . DP=9;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=48 PL:DP:SP:GT:GQ 59,9,0:3:0:1/1:63 | |
| 14454 chr11 31344898 . T C 15.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=45 PL:DP:SP:GT:GQ 47,6,0:2:0:1/1:49 | |
| 14455 chr11 31353725 . T G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14456 chr11 31363521 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14457 chr11 31435045 . t tCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14458 chr11 31436222 . T TG 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 14459 chr11 31443322 . TC TCCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14460 chr11 31446492 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14461 chr11 31457143 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14462 chr11 31544550 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14463 chr11 31549052 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14464 chr11 31582650 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14465 chr11 31591930 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14466 chr11 31616495 . T A 5.49 . DP=5;AF1=0.5049;CI95=0.5,0.5;DP4=0,1,0,3;MQ=48;PV4=1,0.059,1,0.13 PL:DP:SP:GT:GQ 34,0,17:4:0:0/1:20 | |
| 14467 chr11 31640848 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14468 chr11 31640862 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14469 chr11 31653956 . C A 47.4 . DP=33;AF1=0.5554;CI95=0.5,1;DP4=0,2,1,7;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 77,0,7:10:0:0/1:10 | |
| 14470 chr11 31659615 . GA GACGTTATAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14471 chr11 31669239 . T C 13.2 . DP=11;AF1=0.5;CI95=0.5,0.5;DP4=6,0,4,0;MQ=49;PV4=1,0.0032,0.081,1 PL:DP:SP:GT:GQ 43,0,161:10:0:0/1:46 | |
| 14472 chr11 31714830 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14473 chr11 31714832 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14474 chr11 31725778 . AA AAGCTGGTTCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14475 chr11 31735301 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 14476 chr11 31736049 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14477 chr11 31744067 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14478 chr11 31744997 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14479 chr11 31770378 . c cGGGTCGCTTGA 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=48 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 14480 chr11 31792371 . CCC CCCACC 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14481 chr11 31794134 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14482 chr11 31799919 . A AAGCATAAT 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=48 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 14483 chr11 31811112 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14484 chr11 31815167 . A T 99 . DP=48;AF1=0.5;CI95=0.5,0.5;DP4=21,2,17,2;MQ=49;PV4=1,1.2e-21,5.4e-06,0.11 PL:DP:SP:GT:GQ 167,0,255:42:0:0/1:99 | |
| 14485 chr11 31816242 . C G 8.64 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,1;MQ=48;PV4=1,0.34,0.16,1 PL:DP:SP:GT:GQ 38,0,50:4:0:0/1:41 | |
| 14486 chr11 31821233 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14487 chr11 31829485 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14488 chr11 31833530 . CCCCGC CC 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 14489 chr11 31835254 . C CGAAGAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14490 chr11 31854870 . A G 8.65 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14491 chr11 31879078 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 14492 chr11 31894784 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14493 chr11 31903485 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14494 chr11 31917701 . TC TCCGC 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 14495 chr11 31919198 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14496 chr11 31944808 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14497 chr11 31967902 . A AG 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 14498 chr11 31978979 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14499 chr11 31984726 . tga tGAACCCCTGTGga 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14500 chr11 32008521 . gg gGCg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14501 chr11 32012645 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14502 chr11 32033982 . C T 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 14503 chr11 32033997 . A ACC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14504 chr11 32057667 . C CTGAATCACAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14505 chr11 32063906 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14506 chr11 32076865 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14507 chr11 32095605 . T TGGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14508 chr11 32096630 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14509 chr11 32099484 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 14510 chr11 32118925 . A G 32 . DP=15;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=47 PL:DP:SP:GT:GQ 64,9,0:3:0:1/1:63 | |
| 14511 chr11 32124978 . T C 17.1 . DP=5;AF1=0.5;CI95=0.5,0.5;DP4=3,0,1,1;MQ=48;PV4=0.4,1,0.086,1 PL:DP:SP:GT:GQ 47,0,59:5:0:0/1:50 | |
| 14512 chr11 32141396 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14513 chr11 32147843 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14514 chr11 32161909 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14515 chr11 32165541 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 14516 chr11 32166535 . T A 5.46 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,40:2:0:0/1:36 | |
| 14517 chr11 32172159 . T A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 14518 chr11 32212670 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14519 chr11 32243245 . G T 6.2 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,44:2:0:0/1:37 | |
| 14520 chr11 32244531 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14521 chr11 32245541 . T TAA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14522 chr11 32246122 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 14523 chr11 32246460 . G GAA 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 14524 chr11 32253804 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14525 chr11 32257470 . t tCTTAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14526 chr11 32316149 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14527 chr11 32349048 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14528 chr11 32349762 . A C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 14529 chr11 32351091 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 14530 chr11 32357133 . a aGC 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 14531 chr11 32371790 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14532 chr11 32375217 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14533 chr11 32390683 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14534 chr11 32406141 . A G 54.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=43 PL:DP:SP:GT:GQ 86,6,0:2:0:1/1:49 | |
| 14535 chr11 32406962 . cccag cCCAGAccag 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14536 chr11 32412044 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14537 chr11 32413886 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14538 chr11 32446769 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14539 chr11 32457970 . A C 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 14540 chr11 32459882 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14541 chr11 32470828 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14542 chr11 32498506 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14543 chr11 32528585 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 14544 chr11 32528695 . C G 5.46 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,44:2:0:0/1:37 | |
| 14545 chr11 32529627 . G A 4.17 . DP=2;AF1=0.5079;CI95=0.5,0.5;DP4=1,0,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,15:2:0:0/1:18 | |
| 14546 chr11 32531300 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14547 chr11 32533865 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14548 chr11 32549822 . GTT G 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14549 chr11 32575038 . t tTCTCTTCCTC 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=46 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 14550 chr11 32614079 . T G 22 . DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,2;MQ=48;PV4=1,0.00013,0.19,0.17 PL:DP:SP:GT:GQ 52,0,38:4:0:0/1:41 | |
| 14551 chr11 32617537 . A T 28 . DP=34;AF1=0.5;CI95=0.5,0.5;DP4=2,7,8,0;MQ=49;PV4=0.0023,1.4e-06,0.029,1 PL:DP:SP:GT:GQ 58,0,239:17:26:0/1:61 | |
| 14552 chr11 32636467 . C A 4.77 . DP=11;AF1=0.4999;CI95=0.5,0.5;DP4=0,4,0,2;MQ=48;PV4=1,0.19,0.068,1 PL:DP:SP:GT:GQ 33,0,110:6:0:0/1:36 | |
| 14553 chr11 32650307 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14554 chr11 32657266 . T C 86.5 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=43 PL:DP:SP:GT:GQ 119,12,0:4:0:1/1:72 | |
| 14555 chr11 32662261 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14556 chr11 32678931 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14557 chr11 32702439 . C CCGTACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14558 chr11 32720783 . G A 23 . DP=10;AF1=0.5;CI95=0.5,0.5;DP4=4,0,4,0;MQ=49;PV4=1,1.1e-06,0.029,1 PL:DP:SP:GT:GQ 53,0,134:8:0:0/1:56 | |
| 14559 chr11 32813763 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14560 chr11 32853923 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14561 chr11 32859349 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14562 chr11 32869393 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 14563 chr11 32874926 . G A 64 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=5,0,6,2;MQ=49;PV4=0.49,7.6e-06,0.058,1 PL:DP:SP:GT:GQ 94,0,140:13:3:0/1:97 | |
| 14564 chr11 32902780 . G T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 14565 chr11 32920017 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14566 chr11 32937005 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 14567 chr11 32939990 . ta tATAGGa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14568 chr11 32954344 . G A 95 . DP=45;AF1=0.5;CI95=0.5,0.5;DP4=11,10,6,14;MQ=50;PV4=0.21,9.3e-17,0.28,1 PL:DP:SP:GT:GQ 125,0,255:41:7:0/1:99 | |
| 14569 chr11 32974787 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 14570 chr11 32975320 . T G 3.54 . DP=6;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,2,0;MQ=47;PV4=1,0.062,0.3,1 PL:DP:SP:GT:GQ 31,0,41:3:0:0/1:34 | |
| 14571 chr11 32979706 . C T 18.1 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=0,5,0,3;MQ=49;PV4=1,0.14,0.043,1 PL:DP:SP:GT:GQ 48,0,121:8:0:0/1:51 | |
| 14572 chr11 33010516 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14573 chr11 33027290 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14574 chr11 33033050 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14575 chr11 33046251 . a aAGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14576 chr11 33049149 . CTGT CT 99 . INDEL;DP=9;AF1=1;CI95=1,1;DP4=0,0,7,0;MQ=50 PL:DP:SP:GT:GQ 186,21,0:7:0:1/1:84 | |
| 14577 chr11 33054269 . A C 4.77 . DP=16;AF1=0.4999;CI95=0.5,0.5;DP4=4,2,4,0;MQ=49;PV4=0.47,0.0081,0.35,0.0004 PL:DP:SP:GT:GQ 33,0,109:10:3:0/1:36 | |
| 14578 chr11 33071949 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14579 chr11 33071969 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14580 chr11 33089474 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14581 chr11 33097459 . CAT C,CGGGAAT 17.6 . INDEL;DP=6;AF1=0.5064;CI95=0.5,0.5;DP4=1,0,3,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 68,13,38,29,0,55:4:0:0/1:19 | |
| 14582 chr11 33097806 . A AGGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14583 chr11 33103356 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14584 chr11 33107518 . CAGG C 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,0.027,1,0.077 PL:DP:SP:GT:GQ 41,0,83:3:0:0/1:44 | |
| 14585 chr11 33112274 . C A 3.41 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=50 PL:DP:SP:GT:GQ 32,6,0:2:0:1/1:49 | |
| 14586 chr11 33143439 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14587 chr11 33160528 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 14588 chr11 33194457 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14589 chr11 33205065 . g gGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14590 chr11 33205508 . taatctg tAATCTGaatctg 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14591 chr11 33205511 . t tGACTTA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14592 chr11 33228415 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 14593 chr11 33245652 . ATGAT A 6.55 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 43,0,44:2:0:0/1:43 | |
| 14594 chr11 33270048 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14595 chr11 33347276 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14596 chr11 33347285 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14597 chr11 33347442 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14598 chr11 33355703 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14599 chr11 33360886 . ATTTT ATTT 99 . INDEL;DP=29;AF1=1;CI95=1,1;DP4=1,0,19,4;MQ=50;PV4=1,0.3,1,1 PL:DP:SP:GT:GQ 173,47,0:24:0:1/1:99 | |
| 14600 chr11 33362723 . G T 34 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=46 PL:DP:SP:GT:GQ 66,9,0:3:0:1/1:63 | |
| 14601 chr11 33363274 . T A 17.1 . DP=13;AF1=0.5;CI95=0.5,0.5;DP4=0,6,0,5;MQ=49;PV4=1,0.019,0.16,0.2 PL:DP:SP:GT:GQ 47,0,115:11:0:0/1:50 | |
| 14602 chr11 33363279 . T A 17.1 . DP=11;AF1=0.5016;CI95=0.5,0.5;DP4=0,2,0,6;MQ=49;PV4=1,0.045,1,0.25 PL:DP:SP:GT:GQ 47,0,22:8:0:0/1:25 | |
| 14603 chr11 33385665 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14604 chr11 33393248 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14605 chr11 33393722 . T TTA 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 14606 chr11 33407361 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 14607 chr11 33420774 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14608 chr11 33421298 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14609 chr11 33428887 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14610 chr11 33443891 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14611 chr11 33443896 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14612 chr11 33449331 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14613 chr11 33451708 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14614 chr11 33453908 . GG GGCCCTATCGATGACG 7.35 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 14615 chr11 33453953 . C T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 14616 chr11 33470807 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14617 chr11 33476046 . g gGCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14618 chr11 33480538 . CTTTT CTT 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 14619 chr11 33499681 . C T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 14620 chr11 33502878 . AC ACGATGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14621 chr11 33505176 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14622 chr11 33541865 . A C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 14623 chr11 33553230 . GT GTCCATT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14624 chr11 33561202 . C G 5.46 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14625 chr11 33571191 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14626 chr11 33572215 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14627 chr11 33572352 . G T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14628 chr11 33572815 . TCG T 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 14629 chr11 33582922 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14630 chr11 33585155 . C CCACTCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14631 chr11 33596123 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14632 chr11 33600055 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14633 chr11 33614378 . g gGAGCTTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14634 chr11 33623710 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14635 chr11 33657031 . AG AGGG 7.35 . INDEL;DP=2;AF1=0.5006;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,26:2:0:0/1:29 | |
| 14636 chr11 33685899 . GCC GCCC 34.2 . INDEL;DP=3;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=50 PL:DP:SP:GT:GQ 73,6,0:2:0:1/1:49 | |
| 14637 chr11 33689746 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14638 chr11 33692214 . T G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14639 chr11 33692845 . T A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 14640 chr11 33700125 . A C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14641 chr11 33707006 . T A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 14642 chr11 33717668 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14643 chr11 33718456 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14644 chr11 33731837 . G A 99 . DP=45;AF1=0.5;CI95=0.5,0.5;DP4=7,18,9,6;MQ=48;PV4=0.094,4.9e-11,1.7e-07,1 PL:DP:SP:GT:GQ 176,0,255:40:10:0/1:99 | |
| 14645 chr11 33740781 . C CCTCTGAAA 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=49 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 14646 chr11 33742383 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14647 chr11 33743396 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14648 chr11 33754468 . ca cAAAGa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14649 chr11 33763609 . CATATT C 3.25 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,3,1,0;MQ=50;PV4=0.25,0.18,1,1 PL:DP:SP:GT:GQ 38,0,114:4:0:0/1:41 | |
| 14650 chr11 33772238 . A C 3.54 . DP=13;AF1=0.4998;CI95=0.5,0.5;DP4=0,2,0,2;MQ=49;PV4=1,0.19,0.048,0.44 PL:DP:SP:GT:GQ 31,0,48:4:0:0/1:34 | |
| 14651 chr11 33775982 . A G 7.59 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 38,6,0:2:0:1/1:49 | |
| 14652 chr11 33780790 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14653 chr11 33781545 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 14654 chr11 33790283 . GACAAA GA 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,69:3:0:0/1:44 | |
| 14655 chr11 33791871 . c cGAAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14656 chr11 33797155 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14657 chr11 33802238 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14658 chr11 33803984 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14659 chr11 33803992 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14660 chr11 33821592 . aa aAGGAAGa 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 14661 chr11 33824530 . C CGG 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 14662 chr11 33829320 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14663 chr11 33836742 . G A 4.19 . DP=2;AF1=0.5127;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,13:2:0:0/1:16 | |
| 14664 chr11 33838882 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14665 chr11 33856850 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14666 chr11 33870199 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14667 chr11 33879027 . c cGTGAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14668 chr11 33882427 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 14669 chr11 33885475 . G T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14670 chr11 33886294 . A G 74.5 . DP=18;AF1=1;CI95=0.5,1;DP4=0,1,4,3;MQ=49;PV4=1,1,0.26,1 PL:DP:SP:GT:GQ 106,7,0:8:0:1/1:57 | |
| 14671 chr11 33913123 . CCT CCTGACT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14672 chr11 33913865 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14673 chr11 33929610 . gct gCTTAct 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14674 chr11 33955502 . CT CTTAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14675 chr11 33979199 . T A 5.46 . DP=3;AF1=0.5003;CI95=0.5,0.5;DP4=1,0,1,0;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,28:2:0:0/1:30 | |
| 14676 chr11 33984688 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14677 chr11 33988568 . tCA tCACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14678 chr11 34015772 . tg tGCAg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14679 chr11 34035595 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14680 chr11 34045278 . CT CTAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14681 chr11 34084801 . C T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 14682 chr11 34085787 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14683 chr11 34085847 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14684 chr11 34113717 . C T 9.53 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 14685 chr11 34116800 . A AAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14686 chr11 34131539 . TAA T 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 14687 chr11 34131733 . CC CCGTCTTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14688 chr11 34132452 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14689 chr11 34150244 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14690 chr11 34150246 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14691 chr11 34152396 . A G 7.8 . DP=20;AF1=0.5;CI95=0.5,0.5;DP4=8,3,0,4;MQ=49;PV4=0.026,0.0046,4.3e-08,0.11 PL:DP:SP:GT:GQ 37,0,255:15:16:0/1:40 | |
| 14692 chr11 34152939 . T C,A 99 . DP=24;AF1=1;CI95=1,1;DP4=0,0,5,13;MQ=47 PL:DP:SP:GT:GQ 236,51,225,0,28,225:18:0:1/1:99 | |
| 14693 chr11 34158410 . T TC 3.25 . INDEL;DP=24;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14694 chr11 34158411 . A G 99 . DP=25;AF1=1;CI95=0.5,1;DP4=0,2,5,16;MQ=48;PV4=1,0.19,0.15,1 PL:DP:SP:GT:GQ 195,15,0:23:0:1/1:75 | |
| 14695 chr11 34158431 . T C 14.7 . DP=18;AF1=1;CI95=0.5,1;DP4=0,0,1,3;MQ=48 PL:DP:SP:GT:GQ 47,12,0:4:0:1/1:72 | |
| 14696 chr11 34159580 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14697 chr11 34176214 . A G 55.1 . DP=20;AF1=1;CI95=1,1;DP4=0,0,7,0;MQ=48 PL:DP:SP:GT:GQ 88,21,0:7:0:1/1:84 | |
| 14698 chr11 34189580 . GAAC GAACGGCACAAC 36.2 . INDEL;DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=50 PL:DP:SP:GT:GQ 75,6,0:2:0:1/1:49 | |
| 14699 chr11 34211786 . A G 3.02 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14700 chr11 34225963 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 14701 chr11 34226258 . C T 50 . DP=10;AF1=0.5;CI95=0.5,0.5;DP4=1,4,1,4;MQ=49;PV4=1,0.0029,0.037,1 PL:DP:SP:GT:GQ 80,0,166:10:0:0/1:83 | |
| 14702 chr11 34226373 . A T 3.01 . DP=3;AF1=0.4997;CI95=0.5,0.5;DP4=0,2,0,1;MQ=48;PV4=1,0.27,0,1 PL:DP:SP:GT:GQ 30,0,78:3:0:0/1:33 | |
| 14703 chr11 34245294 . C G 3.01 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,32:2:0:0/1:31 | |
| 14704 chr11 34258970 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 14705 chr11 34276197 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14706 chr11 34284775 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14707 chr11 34296570 . A T 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 14708 chr11 34297471 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14709 chr11 34327103 . A C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 14710 chr11 34335762 . T C 7.8 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 14711 chr11 34337207 . GGA GGATAGA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14712 chr11 34339505 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14713 chr11 34356694 . G A 8.64 . DP=6;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,1;MQ=49;PV4=1,0.34,0.048,1 PL:DP:SP:GT:GQ 38,0,50:4:0:0/1:41 | |
| 14714 chr11 34357372 . T C 6.98 . DP=8;AF1=0.4999;CI95=0.5,0.5;DP4=1,1,0,2;MQ=49;PV4=1,0.38,0.14,1 PL:DP:SP:GT:GQ 36,0,48:4:0:0/1:39 | |
| 14715 chr11 34375826 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14716 chr11 34393701 . ct cTt 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14717 chr11 34420109 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14718 chr11 34427496 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14719 chr11 34427504 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14720 chr11 34433545 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14721 chr11 34435170 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14722 chr11 34439422 . G C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 14723 chr11 34453942 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14724 chr11 34455941 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14725 chr11 34459225 . TACA TA 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14726 chr11 34470953 . C A 3.54 . DP=27;AF1=0.4998;CI95=0.5,0.5;DP4=0,2,0,4;MQ=48;PV4=1,0.18,0.087,1 PL:DP:SP:GT:GQ 31,0,49:6:0:0/1:34 | |
| 14727 chr11 34470954 . A C 15.1 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=0,10,0,6;MQ=48;PV4=1,0.17,0.3,1 PL:DP:SP:GT:GQ 45,0,108:16:0:0/1:48 | |
| 14728 chr11 34493707 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14729 chr11 34496124 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 14730 chr11 34537123 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14731 chr11 34540762 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14732 chr11 34562825 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14733 chr11 34575872 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14734 chr11 34576383 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14735 chr11 34588356 . A G 7.8 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 14736 chr11 34605170 . GTTAT G 5.79 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 42,0,44:2:0:0/1:43 | |
| 14737 chr11 34612776 . ca cAa 3.25 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14738 chr11 34615607 . ct cTGAAt 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=1,1,1,0;MQ=50;PV4=1,1,1,0.2 PL:DP:SP:GT:GQ 41,0,66:3:0:0/1:44 | |
| 14739 chr11 34633482 . G A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 14740 chr11 34633933 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14741 chr11 34655148 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14742 chr11 34659094 . C A 12 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 43,6,0:2:0:1/1:49 | |
| 14743 chr11 34667312 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 14744 chr11 34679962 . CA CAGTAA 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14745 chr11 34683633 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14746 chr11 34688308 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14747 chr11 34738033 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14748 chr11 34758420 . G GCC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 14749 chr11 34759364 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14750 chr11 34760236 . G A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 14751 chr11 34798015 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14752 chr11 34813397 . TGG TGGAGGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14753 chr11 34836528 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14754 chr11 34861972 . AT ATCCAAATGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14755 chr11 34865472 . TTGC T 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 14756 chr11 34881819 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 14757 chr11 34905145 . T C 17.1 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=50 PL:DP:SP:GT:GQ 49,9,0:3:0:1/1:63 | |
| 14758 chr11 34909879 . A C 7.59 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 38,6,0:2:0:1/1:49 | |
| 14759 chr11 34912419 . C A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 14760 chr11 34914083 . GACAC GAC 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 14761 chr11 34926870 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14762 chr11 34928626 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14763 chr11 34929559 . T TGGC 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 14764 chr11 34938265 . C T 18.2 . DP=17;AF1=0.5128;CI95=0.5,0.5;DP4=1,1,1,2;MQ=49;PV4=1,1,0.0062,1 PL:DP:SP:GT:GQ 48,0,13:5:0:0/1:16 | |
| 14765 chr11 34979026 . C T 99 . DP=34;AF1=0.5;CI95=0.5,0.5;DP4=16,4,6,6;MQ=48;PV4=0.12,8.8e-08,4.4e-14,1 PL:DP:SP:GT:GQ 174,0,255:32:9:0/1:99 | |
| 14766 chr11 35008186 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14767 chr11 35016842 . A G 6.02 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 36,6,0:2:0:1/1:49 | |
| 14768 chr11 35037191 . ttc t 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14769 chr11 35059370 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 14770 chr11 35072468 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14771 chr11 35084304 . C G 7.8 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 14772 chr11 35086517 . C T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 14773 chr11 35097898 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14774 chr11 35112372 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14775 chr11 35145176 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14776 chr11 35182584 . GG GGGCTACAG 3.25 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,44:2:0:0/1:40 | |
| 14777 chr11 35187780 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14778 chr11 35190771 . gaa g 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14779 chr11 35198108 . A G 99 . DP=9;AF1=1;CI95=1,1;DP4=0,0,8,0;MQ=46 PL:DP:SP:GT:GQ 134,24,0:8:0:1/1:96 | |
| 14780 chr11 35201983 . G A 68 . DP=36;AF1=0.5;CI95=0.5,0.5;DP4=6,14,1,13;MQ=49;PV4=0.2,1.2e-09,0.00046,1 PL:DP:SP:GT:GQ 98,0,255:34:7:0/1:99 | |
| 14781 chr11 35204032 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14782 chr11 35208305 . C G 5.46 . DP=7;AF1=0.4999;CI95=0.5,0.5;DP4=5,0,2,0;MQ=48;PV4=1,2.3e-06,0.011,0.032 PL:DP:SP:GT:GQ 34,0,156:7:0:0/1:37 | |
| 14783 chr11 35208310 . TAATAAAAAT TAAT 3.25 . INDEL;DP=7;AF1=0.5;CI95=0.5,0.5;DP4=3,0,1,0;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,70:4:0:0/1:41 | |
| 14784 chr11 35208316 . A G,T 3.41 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=48 PL:DP:SP:GT:GQ 41,15,31,9,0,31:3:0:1/1:49 | |
| 14785 chr11 35223158 . T C 98 . DP=16;AF1=1;CI95=1,1;DP4=0,0,12,0;MQ=48 PL:DP:SP:GT:GQ 131,36,0:12:0:1/1:99 | |
| 14786 chr11 35227758 . T C 99 . DP=65;AF1=0.5;CI95=0.5,0.5;DP4=20,14,12,14;MQ=49;PV4=0.43,3.6e-31,2.3e-20,1 PL:DP:SP:GT:GQ 205,0,255:60:4:0/1:99 | |
| 14787 chr11 35229673 . T C 85 . DP=43;AF1=1;CI95=1,1;DP4=1,0,33,3;MQ=50;PV4=1,0.00042,0.37,1 PL:DP:SP:GT:GQ 118,84,0:37:0:1/1:99 | |
| 14788 chr11 35239931 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 14789 chr11 35244471 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14790 chr11 35254570 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14791 chr11 35260500 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14792 chr11 35261895 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14793 chr11 35270586 . cata ca 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 14794 chr11 35271789 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14795 chr11 35272832 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14796 chr11 35277088 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14797 chr11 35280521 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14798 chr11 35290887 . ac aCGAGCc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14799 chr11 35318915 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14800 chr11 35349242 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 14801 chr11 35372368 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14802 chr11 35380417 . T A 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14803 chr11 35384662 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 14804 chr11 35385787 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14805 chr11 35396018 . T C 15.9 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47 PL:DP:SP:GT:GQ 47,6,0:2:0:1/1:49 | |
| 14806 chr11 35419191 . a aAGAAGCCT 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 14807 chr11 35421527 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14808 chr11 35428126 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14809 chr11 35430424 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 14810 chr11 35446203 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14811 chr11 35453796 . GCCC GCC 19.3 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=50 PL:DP:SP:GT:GQ 58,6,0:2:0:1/1:49 | |
| 14812 chr11 35455437 . T G 5.46 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14813 chr11 35527452 . ctgt cTGTTtgt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14814 chr11 35545626 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14815 chr11 35549362 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14816 chr11 35566163 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14817 chr11 35575436 . G T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14818 chr11 35580388 . A T 6.98 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14819 chr11 35581910 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 14820 chr11 35590940 . C G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 14821 chr11 35614755 . ttct tTCtct 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14822 chr11 35619724 . A G 13.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 14823 chr11 35632547 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14824 chr11 35633540 . tc tCGGTGAAAc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14825 chr11 35633762 . c cTG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 14826 chr11 35662280 . gc gCGTCATAATTc 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 14827 chr11 35682385 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 14828 chr11 35715696 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14829 chr11 35744641 . C A 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14830 chr11 35755680 . AT ATCACT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14831 chr11 35760239 . A ATTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14832 chr11 35762223 . T A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 14833 chr11 35774950 . GT GTCACCACCTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14834 chr11 35803523 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14835 chr11 35818810 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14836 chr11 35824900 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 14837 chr11 35828382 . C T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 14838 chr11 35842679 . GCTA GCTACTA 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 14839 chr11 35859466 . G A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 14840 chr11 35873999 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 14841 chr11 35880080 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14842 chr11 35882785 . G T 4.13 . DP=2;AF1=0.5001;CI95=0.5,0.5;DP4=0,1,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,30:2:0:0/1:31 | |
| 14843 chr11 35942399 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14844 chr11 35961654 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 14845 chr11 35969606 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14846 chr11 35987997 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14847 chr11 35991881 . T C 3.18 . DP=2;AF1=0.5428;CI95=0.5,1;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,8:2:0:0/1:11 | |
| 14848 chr11 36016331 . t tATAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14849 chr11 36021032 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 14850 chr11 36051283 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14851 chr11 36057626 . G A 99 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=8,0,9,2;MQ=46;PV4=0.49,1.1e-05,7.4e-10,1 PL:DP:SP:GT:GQ 237,0,188:19:3:0/1:99 | |
| 14852 chr11 36068272 . A C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 14853 chr11 36094761 . G GCGAGACT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14854 chr11 36103669 . ca cACAAa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14855 chr11 36112830 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14856 chr11 36113070 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14857 chr11 36156338 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14858 chr11 36170095 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14859 chr11 36182280 . T C 9.31 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 14860 chr11 36185913 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 14861 chr11 36208163 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14862 chr11 36215001 . A T 4.77 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14863 chr11 36226563 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14864 chr11 36227096 . T A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 14865 chr11 36237025 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14866 chr11 36243756 . c cATCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14867 chr11 36256464 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 14868 chr11 36262712 . GGAGT G 3.25 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,44:2:0:0/1:40 | |
| 14869 chr11 36273758 . CAG CAGAG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14870 chr11 36278415 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 14871 chr11 36280465 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14872 chr11 36285390 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14873 chr11 36311884 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 14874 chr11 36314791 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14875 chr11 36316168 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14876 chr11 36344548 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14877 chr11 36348857 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14878 chr11 36391910 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 14879 chr11 36398574 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14880 chr11 36422355 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14881 chr11 36434542 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14882 chr11 36460867 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14883 chr11 36468102 . TTACTACTA TTACTACTACTA 42.5 . INDEL;DP=6;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,2;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 80,0,61:4:0:0/1:64 | |
| 14884 chr11 36468108 . CTATT CTATTATT 15.6 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,2;MQ=50;PV4=1,0.4,1,0.4 PL:DP:SP:GT:GQ 53,0,41:3:0:0/1:44 | |
| 14885 chr11 36475409 . aa aAGAGa 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 14886 chr11 36481874 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14887 chr11 36482091 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14888 chr11 36489648 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14889 chr11 36494928 . G A 6.2 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,44:2:0:0/1:37 | |
| 14890 chr11 36495044 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14891 chr11 36520066 . G A 6.98 . DP=8;AF1=0.4999;CI95=0.5,0.5;DP4=4,1,0,2;MQ=48;PV4=0.14,0.14,0.0024,1 PL:DP:SP:GT:GQ 36,0,151:7:8:0/1:39 | |
| 14892 chr11 36532617 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14893 chr11 36580431 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14894 chr11 36590929 . G T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14895 chr11 36595600 . A G 58 . DP=30;AF1=0.5;CI95=0.5,0.5;DP4=5,8,7,7;MQ=50;PV4=0.7,1.2e-12,1,1 PL:DP:SP:GT:GQ 88,0,255:27:2:0/1:91 | |
| 14896 chr11 36598748 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 14897 chr11 36630874 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14898 chr11 36634551 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 14899 chr11 36643621 . A AAGGACG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14900 chr11 36669778 . C T 75 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=0,12,0,9;MQ=48;PV4=1,1.1e-06,2.4e-05,1 PL:DP:SP:GT:GQ 105,0,220:21:0:0/1:99 | |
| 14901 chr11 36695631 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 14902 chr11 36707549 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 14903 chr11 36745282 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14904 chr11 36752958 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14905 chr11 36756754 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14906 chr11 36773279 . A ATCCCATT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14907 chr11 36792768 . T C 6.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14908 chr11 36800855 . G GGCGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14909 chr11 36809585 . T TAGTGAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14910 chr11 36893215 . T A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 14911 chr11 36903682 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14912 chr11 36910694 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14913 chr11 36920139 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14914 chr11 36924027 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 14915 chr11 36951582 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14916 chr11 36963124 . C CG 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14917 chr11 37002216 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 14918 chr11 37037363 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14919 chr11 37046400 . ag aGGACGCTGATg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14920 chr11 37069152 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14921 chr11 37080444 . T C 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,43:2:0:0/1:34 | |
| 14922 chr11 37180511 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14923 chr11 37190710 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14924 chr11 37210200 . T C 26.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47 PL:DP:SP:GT:GQ 58,6,0:2:0:1/1:49 | |
| 14925 chr11 37218278 . CTT CTTATTATTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14926 chr11 37258653 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 14927 chr11 37261095 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14928 chr11 37278095 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14929 chr11 37278264 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 14930 chr11 37305977 . AT ATAATT 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 14931 chr11 37306869 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 14932 chr11 37308439 . a aCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14933 chr11 37321783 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14934 chr11 37341766 . a aCCT 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 14935 chr11 37353661 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 14936 chr11 37364206 . a aT 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 14937 chr11 37376377 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14938 chr11 37377774 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14939 chr11 37378808 . A G 6.2 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,35:2:0:0/1:35 | |
| 14940 chr11 37460942 . A T 62.3 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,2,3;MQ=48 PL:DP:SP:GT:GQ 95,15,0:5:0:1/1:75 | |
| 14941 chr11 37482348 . tt tTGTGt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14942 chr11 37493416 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14943 chr11 37501892 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14944 chr11 37525087 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14945 chr11 37529001 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14946 chr11 37536123 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14947 chr11 37564811 . AA AATA 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 14948 chr11 37582548 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14949 chr11 37601517 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14950 chr11 37611727 . tta t 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 14951 chr11 37625243 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14952 chr11 37630466 . T G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 14953 chr11 37644081 . C A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 14954 chr11 37651244 . agtct a 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 14955 chr11 37655062 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14956 chr11 37657665 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 14957 chr11 37686621 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14958 chr11 37704760 . G T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 14959 chr11 37704922 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14960 chr11 37711625 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14961 chr11 37712311 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14962 chr11 37747275 . G T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14963 chr11 37761698 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 14964 chr11 37783184 . CT CTATTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14965 chr11 37793328 . a aCCTACG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14966 chr11 37799521 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14967 chr11 37802761 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14968 chr11 37817598 . G T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14969 chr11 37822185 . ac aCCCTc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14970 chr11 37839624 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14971 chr11 37878718 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14972 chr11 37879858 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14973 chr11 37903026 . atacta ata 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14974 chr11 37913227 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14975 chr11 37926337 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14976 chr11 37930150 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14977 chr11 37939505 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14978 chr11 37965407 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14979 chr11 37965419 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14980 chr11 37966751 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 14981 chr11 37967687 . acc a 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 14982 chr11 37988409 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14983 chr11 38002667 . TATA T 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 14984 chr11 38003898 . TGC T 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 14985 chr11 38005017 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 14986 chr11 38008799 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 14987 chr11 38022056 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14988 chr11 38033426 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14989 chr11 38076310 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 14990 chr11 38082361 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14991 chr11 38082404 . CAGAGA CAGAGAGA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14992 chr11 38096501 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 14993 chr11 38098603 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14994 chr11 38107465 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 14995 chr11 38111202 . at aTACTGAGGt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 14996 chr11 38117857 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14997 chr11 38125644 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 14998 chr11 38133974 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 14999 chr11 38138000 . cttaca c 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15000 chr11 38156059 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 15001 chr11 38174193 . a aCCCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15002 chr11 38180173 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15003 chr11 38219684 . A AGCGAGCGA 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 15004 chr11 38232457 . TT TTCAGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15005 chr11 38249594 . aggagt aGGAGTggagt 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 15006 chr11 38259017 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15007 chr11 38263285 . T TGGGATCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15008 chr11 38277256 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 15009 chr11 38322146 . gtat gt 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15010 chr11 38328919 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 15011 chr11 38329078 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15012 chr11 38357362 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15013 chr11 38379594 . a aAATAAAAC 7.69 . INDEL;DP=2;AF1=0.5554;CI95=0.5,1;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,7:2:0:0/1:10 | |
| 15014 chr11 38415696 . G T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 15015 chr11 38415967 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 15016 chr11 38417468 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 15017 chr11 38429192 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15018 chr11 38433061 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 15019 chr11 38435526 . G A 4.14 . DP=2;AF1=0.5024;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,20:2:0:0/1:23 | |
| 15020 chr11 38452983 . g gGCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15021 chr11 38453746 . TAAA TAAATCAAAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15022 chr11 38456237 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15023 chr11 38469977 . G A 50 . DP=11;AF1=0.5;CI95=0.5,0.5;DP4=4,0,4,2;MQ=49;PV4=0.47,6.8e-06,0,1 PL:DP:SP:GT:GQ 80,0,121:10:3:0/1:83 | |
| 15024 chr11 38515336 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15025 chr11 38590506 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15026 chr11 38609793 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15027 chr11 38613869 . TTT TTTCGTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15028 chr11 38627913 . C G 41 . DP=5;AF1=0.5;CI95=0.5,0.5;DP4=1,1,1,2;MQ=46;PV4=1,0.29,0.46,1 PL:DP:SP:GT:GQ 71,0,49:5:0:0/1:52 | |
| 15029 chr11 38638563 . ag aGAAGg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15030 chr11 38663637 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15031 chr11 38668462 . T G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 15032 chr11 38685999 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15033 chr11 38715146 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15034 chr11 38724025 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15035 chr11 38741806 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15036 chr11 38747354 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 15037 chr11 38754650 . G T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 15038 chr11 38762140 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 15039 chr11 38774197 . taaa ta 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 15040 chr11 38819112 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15041 chr11 38827886 . AC ACCCTACC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15042 chr11 38861761 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 15043 chr11 38863617 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15044 chr11 38878099 . ACT ACTTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15045 chr11 38912788 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15046 chr11 38935761 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 15047 chr11 38955479 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15048 chr11 38972119 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15049 chr11 39008967 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15050 chr11 39020577 . t tATGGCGCCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15051 chr11 39028667 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 15052 chr11 39047035 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15053 chr11 39057466 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15054 chr11 39060429 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15055 chr11 39076350 . C A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 15056 chr11 39078586 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15057 chr11 39124329 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15058 chr11 39127164 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 15059 chr11 39139359 . T TGTCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15060 chr11 39156963 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15061 chr11 39160057 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15062 chr11 39165608 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15063 chr11 39178177 . C G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 15064 chr11 39184047 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15065 chr11 39186657 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 15066 chr11 39190909 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 15067 chr11 39201602 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15068 chr11 39227779 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15069 chr11 39292953 . C G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 15070 chr11 39294685 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 15071 chr11 39295229 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15072 chr11 39303693 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15073 chr11 39308475 . T A 8.44 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=30 PL:DP:SP:GT:GQ 39,6,0:2:0:1/1:49 | |
| 15074 chr11 39317736 . t tGTAAGGC 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=49 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 15075 chr11 39322696 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 15076 chr11 39340140 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 15077 chr11 39357359 . A T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 15078 chr11 39367500 . ATA ATAATTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15079 chr11 39373439 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 15080 chr11 39375790 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15081 chr11 39389814 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 15082 chr11 39406154 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15083 chr11 39455767 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15084 chr11 39455775 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15085 chr11 39480594 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 15086 chr11 39502241 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 15087 chr11 39503269 . t tGTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15088 chr11 39505178 . C G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 15089 chr11 39562141 . a aCATT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15090 chr11 39593924 . A ATCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15091 chr11 39598040 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15092 chr11 39617497 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 15093 chr11 39674934 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 15094 chr11 39676037 . a aGG 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 15095 chr11 39680850 . AG AGGTGGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15096 chr11 39712538 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15097 chr11 39739910 . T A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 15098 chr11 39781455 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 15099 chr11 39804198 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 15100 chr11 39805638 . A G 5.56 . DP=2;AF1=0.5162;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,12:2:0:0/1:15 | |
| 15101 chr11 39807368 . g gAGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15102 chr11 39811780 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 15103 chr11 39816585 . A G 32.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=46 PL:DP:SP:GT:GQ 64,6,0:2:0:1/1:49 | |
| 15104 chr11 39856185 . G T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 15105 chr11 39876975 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15106 chr11 39884680 . G A 5.47 . DP=2;AF1=0.5009;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,24:2:0:0/1:27 | |
| 15107 chr11 39923275 . A G 5.46 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,44:2:0:0/1:37 | |
| 15108 chr11 39934020 . G A 21.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=42 PL:DP:SP:GT:GQ 53,6,0:2:0:1/1:49 | |
| 15109 chr11 39965607 . t tGATCTGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15110 chr11 39969583 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15111 chr11 39972198 . GTA GTATA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15112 chr11 40020820 . C A 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 15113 chr11 40050325 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15114 chr11 40066675 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15115 chr11 40135770 . A AAAACC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15116 chr11 40137543 . T C 36.5 . DP=37;AF1=1;CI95=0.5,1;DP4=0,0,2,2;MQ=49 PL:DP:SP:GT:GQ 69,12,0:4:0:1/1:72 | |
| 15117 chr11 40158415 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 15118 chr11 40192167 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 15119 chr11 40206307 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 15120 chr11 40224349 . C T 13.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 15121 chr11 40229183 . G GACT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15122 chr11 40231897 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 15123 chr11 40259397 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 15124 chr11 40286381 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 15125 chr11 40302886 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 15126 chr11 40303434 . C T 3.03 . DP=2;AF1=0.5029;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,19:2:0:0/1:22 | |
| 15127 chr11 40312883 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 15128 chr11 40317255 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 15129 chr11 40334708 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15130 chr11 40377533 . ag aGCTAGTg 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15131 chr11 40390890 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15132 chr11 40417196 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 15133 chr11 40420009 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15134 chr11 40420011 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15135 chr11 40439618 . G C 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 15136 chr11 40520052 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=46 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15137 chr11 40525407 . A C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 15138 chr11 40551578 . CA CATGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15139 chr11 40557520 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15140 chr11 40576270 . t tGAAGGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15141 chr11 40586271 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 15142 chr11 40625264 . taa t 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 15143 chr11 40658914 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15144 chr11 40676461 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15145 chr11 40743213 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 15146 chr11 40777278 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 15147 chr11 40784081 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15148 chr11 40825417 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 15149 chr11 40826486 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 15150 chr11 40841817 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 15151 chr11 40845889 . caaaaa c 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15152 chr11 40872408 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15153 chr11 40888089 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15154 chr11 40888656 . ACT A 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 15155 chr11 40901074 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15156 chr11 40951092 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15157 chr11 40960305 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15158 chr11 40962490 . TT TTACTACATGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15159 chr11 40985378 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15160 chr11 41016495 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 15161 chr11 41050774 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 15162 chr11 41065409 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15163 chr11 41078819 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15164 chr11 41079253 . tgacag tg 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 15165 chr11 41118090 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 15166 chr11 41128370 . ag aGGg 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 15167 chr11 41199481 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15168 chr11 41226527 . A C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 15169 chr11 41227573 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 15170 chr11 41259151 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15171 chr11 41262124 . A T 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 15172 chr11 41271891 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15173 chr11 41282445 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 15174 chr11 41282720 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15175 chr11 41293201 . gt gTTCCCt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15176 chr11 41312879 . A AAG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 15177 chr11 41328457 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15178 chr11 41334975 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15179 chr11 41337073 . c cTGGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15180 chr11 41350200 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 15181 chr11 41364422 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15182 chr11 41364927 . a aGCAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15183 chr11 41366427 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 15184 chr11 41375884 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15185 chr11 41376355 . g gCT 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 15186 chr11 41378729 . A G 6.98 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 15187 chr11 41418487 . C G 5.46 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 15188 chr11 41427645 . gagacaga gaga 7.35 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 15189 chr11 41435266 . T C 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15190 chr11 41448110 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 15191 chr11 41456992 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 15192 chr11 41461014 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15193 chr11 41464851 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15194 chr11 41474630 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15195 chr11 41496047 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15196 chr11 41513940 . G GTGTCGCGGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15197 chr11 41515851 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15198 chr11 41523283 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15199 chr11 41531403 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 15200 chr11 41532254 . AC ACCTTGTC 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15201 chr11 41543073 . T C 17.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 49,6,0:2:0:1/1:49 | |
| 15202 chr11 41544249 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 15203 chr11 41576719 . T G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 15204 chr11 41587138 . a aAGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15205 chr11 41612993 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15206 chr11 41628971 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 15207 chr11 41664429 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15208 chr11 41665330 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 15209 chr11 41677662 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15210 chr11 41681682 . G T 3.01 . DP=3;AF1=0.4997;CI95=0.5,0.5;DP4=1,1,0,1;MQ=48;PV4=1,0.42,0,1 PL:DP:SP:GT:GQ 30,0,75:3:0:0/1:33 | |
| 15211 chr11 41695923 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=47 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15212 chr11 41703559 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 15213 chr11 41707827 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15214 chr11 41720714 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 15215 chr11 41741188 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15216 chr11 41744656 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 15217 chr11 41753895 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15218 chr11 41770340 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15219 chr11 41784475 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15220 chr11 41792321 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15221 chr11 41794573 . ca cATAa 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 15222 chr11 41847747 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 15223 chr11 41861225 . T G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 15224 chr11 41870906 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 15225 chr11 41879329 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15226 chr11 41883123 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 15227 chr11 41917519 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15228 chr11 41918452 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 15229 chr11 41964849 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15230 chr11 41967572 . T A 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,0;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,36:2:0:0/1:32 | |
| 15231 chr11 41981891 . a aTTCTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15232 chr11 41984411 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 15233 chr11 41985471 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15234 chr11 42001857 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15235 chr11 42008635 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 15236 chr11 42034573 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15237 chr11 42104651 . CT CTCACCAATGT 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 15238 chr11 42118324 . TA TAACA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15239 chr11 42171055 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 15240 chr11 42197253 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15241 chr11 42198584 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15242 chr11 42236104 . gt gTGGGGCt 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15243 chr11 42238538 . G T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 15244 chr11 42248741 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 15245 chr11 42249831 . T C 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 15246 chr11 42282981 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15247 chr11 42309372 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 15248 chr11 42330324 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15249 chr11 42333033 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 15250 chr11 42360482 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15251 chr11 42363569 . A C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 15252 chr11 42385156 . a aGCCGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15253 chr11 42392475 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 15254 chr11 42398764 . ca cAAa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15255 chr11 42429559 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15256 chr11 42446626 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 15257 chr11 42456959 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 15258 chr11 42472018 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 15259 chr11 42483573 . g gCAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15260 chr11 42488531 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15261 chr11 42502513 . T C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 15262 chr11 42535319 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 15263 chr11 42550313 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15264 chr11 42553135 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 15265 chr11 42586316 . C G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 15266 chr11 42639760 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15267 chr11 42640519 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15268 chr11 42655699 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15269 chr11 42665514 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 15270 chr11 42683799 . A C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15271 chr11 42690878 . A C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15272 chr11 42705602 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 15273 chr11 42723064 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15274 chr11 42726249 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 15275 chr11 42731812 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15276 chr11 42739911 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15277 chr11 42754398 . t tAACAC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 15278 chr11 42766444 . A T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 15279 chr11 42795333 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15280 chr11 42807811 . C CGCTAGAGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15281 chr11 42827167 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15282 chr11 42886307 . A AGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15283 chr11 42920483 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 15284 chr11 42941263 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15285 chr11 42947318 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 15286 chr11 42947931 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 15287 chr11 42951437 . c cACGTCAG 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 15288 chr11 42954105 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15289 chr11 42960837 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 15290 chr11 42984707 . G C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 15291 chr11 42986644 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15292 chr11 42993226 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 15293 chr11 42997524 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15294 chr11 42997539 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 15295 chr11 43048956 . T G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15296 chr11 43061038 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15297 chr11 43083920 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15298 chr11 43089979 . a aACGAGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15299 chr11 43137342 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 15300 chr11 43154477 . AA AATGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15301 chr11 43170932 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 15302 chr11 43212692 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15303 chr11 43234872 . ac aCGTATc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15304 chr11 43235274 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15305 chr11 43251245 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15306 chr11 43253837 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 15307 chr11 43264465 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 15308 chr11 43273102 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15309 chr11 43281639 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15310 chr11 43284469 . G A 24 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=49 PL:DP:SP:GT:GQ 56,9,0:3:0:1/1:63 | |
| 15311 chr11 43289291 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15312 chr11 43296825 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 15313 chr11 43302210 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 15314 chr11 43308146 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 15315 chr11 43318548 . ggat gGATCCCAgat 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15316 chr11 43330724 . G GTA 4.42 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 15317 chr11 43333728 . C A 12 . DP=9;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 43,6,0:2:0:1/1:49 | |
| 15318 chr11 43342194 . t tAG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 15319 chr11 43343704 . T C 8.64 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=1,3,0,4;MQ=48;PV4=1,0.019,0.13,0.32 PL:DP:SP:GT:GQ 38,0,118:8:0:0/1:41 | |
| 15320 chr11 43348052 . T A 17.1 . DP=16;AF1=0.5005;CI95=0.5,0.5;DP4=3,0,5,0;MQ=49;PV4=1,0.42,1,0.0085 PL:DP:SP:GT:GQ 47,0,27:8:0:0/1:30 | |
| 15321 chr11 43350471 . C G 10.4 . DP=17;AF1=0.5001;CI95=0.5,0.5;DP4=0,3,0,2;MQ=48;PV4=1,1,0,1 PL:DP:SP:GT:GQ 40,0,35:5:0:0/1:37 | |
| 15322 chr11 43353691 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 15323 chr11 43378101 . C T 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 15324 chr11 43428502 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15325 chr11 43429112 . C T 11.3 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=3,4,0,5;MQ=49;PV4=0.2,0.017,0.3,0.42 PL:DP:SP:GT:GQ 41,0,179:12:7:0/1:44 | |
| 15326 chr11 43449089 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 15327 chr11 43450347 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15328 chr11 43456700 . A AGCGTGTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15329 chr11 43472895 . G C 45.3 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,1,4;MQ=49 PL:DP:SP:GT:GQ 78,15,0:5:0:1/1:75 | |
| 15330 chr11 43479724 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15331 chr11 43485252 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 15332 chr11 43519115 . Cagag CAGagag 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15333 chr11 43534074 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15334 chr11 43541874 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15335 chr11 43543809 . A T 3.01 . DP=7;AF1=0.4997;CI95=0.5,0.5;DP4=3,0,0,2;MQ=48;PV4=0.1,0.042,0.2,0.38 PL:DP:SP:GT:GQ 30,0,103:5:10:0/1:33 | |
| 15336 chr11 43544617 . G T 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,0,1;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 15337 chr11 43546703 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15338 chr11 43549203 . a aTCCT 7.38 . INDEL;DP=2;AF1=0.504;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,18:2:0:0/1:21 | |
| 15339 chr11 43557692 . cc cCTTc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15340 chr11 43563476 . g gAT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 15341 chr11 43565361 . a aCAGTCACAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15342 chr11 43608900 . a aAGACGTAACC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15343 chr11 43625502 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15344 chr11 43637084 . G T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 15345 chr11 43666322 . ACG ACGAACCG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15346 chr11 43681713 . ca cAGTa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15347 chr11 43702395 . CG CGTGG 7.35 . INDEL;DP=9;AF1=0.5004;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,28:2:0:0/1:31 | |
| 15348 chr11 43750146 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15349 chr11 43767647 . g gTAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15350 chr11 43771825 . gt gTAt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15351 chr11 43774294 . g gGCTCAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15352 chr11 43782390 . C G 4.21 . DP=2;AF1=0.5161;CI95=0.5,0.5;DP4=0,1,0,1;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,12:2:0:0/1:15 | |
| 15353 chr11 43783924 . A AT 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15354 chr11 43795541 . GG GGTG 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15355 chr11 43802124 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15356 chr11 43807771 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 15357 chr11 43808623 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15358 chr11 43837073 . A G 13.2 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=1,9,0,7;MQ=50;PV4=1,7.3e-09,1,1 PL:DP:SP:GT:GQ 43,0,250:17:0:0/1:46 | |
| 15359 chr11 43841764 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15360 chr11 43843848 . T TGGGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15361 chr11 43876435 . A G 88 . DP=29;AF1=0.5;CI95=0.5,0.5;DP4=1,10,0,17;MQ=49;PV4=0.39,1.6e-07,0.022,1 PL:DP:SP:GT:GQ 118,0,234:28:0:0/1:99 | |
| 15362 chr11 43907124 . TGA TGAGA 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 15363 chr11 43908230 . C T 36.5 . DP=23;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=48 PL:DP:SP:GT:GQ 69,12,0:4:0:1/1:72 | |
| 15364 chr11 43911365 . T C 38.1 . DP=39;AF1=0.508;CI95=0.5,0.5;DP4=0,1,2,2;MQ=47;PV4=1,0.043,0.23,1 PL:DP:SP:GT:GQ 68,0,15:5:0:0/1:18 | |
| 15365 chr11 43919694 . C T,A 29.5 . DP=18;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=47 PL:DP:SP:GT:GQ 68,18,57,6,0,57:5:0:1/1:72 | |
| 15366 chr11 43919778 . C T 22 . DP=28;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=43 PL:DP:SP:GT:GQ 54,9,0:3:0:1/1:63 | |
| 15367 chr11 43919786 . C G 19 . DP=29;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=49 PL:DP:SP:GT:GQ 51,9,0:3:0:1/1:63 | |
| 15368 chr11 43919873 . T G 3.01 . DP=11;AF1=0.4998;CI95=0.5,0.5;DP4=2,0,0,2;MQ=47;PV4=0.33,0.0068,0.028,1 PL:DP:SP:GT:GQ 30,0,47:4:5:0/1:33 | |
| 15369 chr11 43919883 . T G 3.01 . DP=15;AF1=0.4998;CI95=0.5,0.5;DP4=2,0,1,1;MQ=46;PV4=1,0.22,1,1 PL:DP:SP:GT:GQ 30,0,55:4:0:0/1:33 | |
| 15370 chr11 43920979 . G A 84 . DP=10;AF1=1;CI95=1,1;DP4=0,0,5,3;MQ=50 PL:DP:SP:GT:GQ 117,24,0:8:0:1/1:96 | |
| 15371 chr11 43932785 . G C 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 15372 chr11 43944012 . TC TCAGAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15373 chr11 43954984 . g gGCCACCTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15374 chr11 43960892 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15375 chr11 43960899 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15376 chr11 43969890 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15377 chr11 43975258 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 15378 chr11 43983521 . C A 8.44 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 39,6,0:2:0:1/1:49 | |
| 15379 chr11 44000220 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15380 chr11 44000615 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 15381 chr11 44018234 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 15382 chr11 44022094 . G C 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,0,1;MQ=41;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,38:2:0:0/1:32 | |
| 15383 chr11 44030976 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15384 chr11 44033432 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 15385 chr11 44074905 . G A 7.8 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=7,0,3,0;MQ=49;PV4=1,0.11,0.0079,0.34 PL:DP:SP:GT:GQ 37,0,124:10:0:0/1:40 | |
| 15386 chr11 44076687 . G T 3.02 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15387 chr11 44080210 . T C 46.5 . DP=14;AF1=1;CI95=0.5,1;DP4=0,0,1,3;MQ=47 PL:DP:SP:GT:GQ 79,12,0:4:0:1/1:72 | |
| 15388 chr11 44089161 . G A 96.3 . DP=18;AF1=0.5336;CI95=0.5,1;DP4=1,0,6,0;MQ=44;PV4=1,1,7.6e-05,1 PL:DP:SP:GT:GQ 126,0,9:7:0:0/1:12 | |
| 15389 chr11 44089352 . G A 99 . DP=29;AF1=1;CI95=1,1;DP4=0,0,4,7;MQ=49 PL:DP:SP:GT:GQ 148,33,0:11:0:1/1:99 | |
| 15390 chr11 44089965 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15391 chr11 44102227 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 15392 chr11 44104701 . CCTCT CCTCTCT 99 . INDEL;DP=44;AF1=0.5;CI95=0.5,0.5;DP4=11,6,17,3;MQ=50;PV4=0.25,1,1,1 PL:DP:SP:GT:GQ 255,0,255:37:6:0/1:99 | |
| 15393 chr11 44129500 . C G 12.3 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=4,4,0,5;MQ=49;PV4=0.1,0.0016,0.34,0.41 PL:DP:SP:GT:GQ 42,0,230:13:10:0/1:45 | |
| 15394 chr11 44146256 . CATAA CGATAA 35.5 . INDEL;DP=8;AF1=0.501;CI95=0.5,0.5;DP4=1,0,3,0;MQ=50;PV4=1,0.11,1,0.44 PL:DP:SP:GT:GQ 73,0,24:4:0:0/1:27 | |
| 15395 chr11 44156453 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 15396 chr11 44157729 . G GACACAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15397 chr11 44160044 . agg a 6.56 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 15398 chr11 44169869 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 15399 chr11 44181358 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 15400 chr11 44190468 . t tAGTCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15401 chr11 44192973 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15402 chr11 44216330 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 15403 chr11 44220076 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15404 chr11 44224668 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 15405 chr11 44226351 . T G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15406 chr11 44241667 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 15407 chr11 44270056 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15408 chr11 44274256 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15409 chr11 44284707 . CC CCGTC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 15410 chr11 44286451 . GGA GGAAGTCCAGA 5.08 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,2,1,0;MQ=50;PV4=0.33,1,1,1 PL:DP:SP:GT:GQ 41,0,79:3:0:0/1:44 | |
| 15411 chr11 44286752 . GA GAAGAAAGTA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 15412 chr11 44289071 . G A 16.1 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=0,1,2,1;MQ=50;PV4=1,0.0023,0.33,0.2 PL:DP:SP:GT:GQ 46,0,38:4:0:0/1:40 | |
| 15413 chr11 44289312 . C G 30 . DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,2;MQ=45;PV4=1,0.17,0.055,1 PL:DP:SP:GT:GQ 60,0,78:4:0:0/1:63 | |
| 15414 chr11 44293115 . a aCTC 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 15415 chr11 44293384 . TG TGTTTCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15416 chr11 44297054 . T C 36.5 . DP=32;AF1=0.5718;CI95=0.5,1;DP4=0,1,3,2;MQ=49;PV4=1,0.25,0.31,1 PL:DP:SP:GT:GQ 66,0,6:6:0:0/1:8 | |
| 15417 chr11 44339291 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 15418 chr11 44347825 . C A 5.46 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,44:2:0:0/1:37 | |
| 15419 chr11 44350728 . C G 17.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=45 PL:DP:SP:GT:GQ 49,6,0:2:0:1/1:49 | |
| 15420 chr11 44354133 . TC TCTCCAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15421 chr11 44359906 . AG AGG 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15422 chr11 44366297 . TG TGTCG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 15423 chr11 44366707 . T TC 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 15424 chr11 44399435 . g gGT 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15425 chr11 44426295 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 15426 chr11 44429785 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 15427 chr11 44441487 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15428 chr11 44441545 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15429 chr11 44451787 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15430 chr11 44456063 . tt tTTGGAt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15431 chr11 44474002 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 15432 chr11 44481130 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 15433 chr11 44491907 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 15434 chr11 44525289 . A T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 15435 chr11 44535914 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15436 chr11 44540397 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 15437 chr11 44543203 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 15438 chr11 44562224 . C T 30.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=43 PL:DP:SP:GT:GQ 62,6,0:2:0:1/1:49 | |
| 15439 chr11 44573666 . A ACGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15440 chr11 44578512 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15441 chr11 44579987 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15442 chr11 44584275 . T A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 15443 chr11 44595224 . T C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 15444 chr11 44606610 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 15445 chr11 44609628 . AA AATA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15446 chr11 44633060 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 15447 chr11 44640532 . TG TGTGAACAG 5.08 . INDEL;DP=7;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,1,1,0.39 PL:DP:SP:GT:GQ 41,0,83:3:0:0/1:44 | |
| 15448 chr11 44646584 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 15449 chr11 44656494 . GG GGAG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15450 chr11 44682879 . G A 12.8 . DP=4;AF1=0.5718;CI95=0.5,1;DP4=0,1,1,1;MQ=48;PV4=1,1,0.27,1 PL:DP:SP:GT:GQ 42,0,6:3:0:0/1:8 | |
| 15451 chr11 44703970 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 15452 chr11 44708672 . G A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 15453 chr11 44724684 . G A 44.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=43 PL:DP:SP:GT:GQ 76,6,0:2:0:1/1:49 | |
| 15454 chr11 44735677 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15455 chr11 44746450 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15456 chr11 44758876 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15457 chr11 44777548 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15458 chr11 44786135 . CT CTGGT 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 15459 chr11 44800838 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15460 chr11 44805680 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15461 chr11 44827333 . tc tCAAGGc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15462 chr11 44829410 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15463 chr11 44855988 . TGT TGTTCTGGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15464 chr11 44874186 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15465 chr11 44882700 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15466 chr11 44901529 . T G 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15467 chr11 44907753 . C A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 15468 chr11 44907937 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 15469 chr11 44914301 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15470 chr11 44917254 . TCCCC TCCCCC 11.5 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=50 PL:DP:SP:GT:GQ 50,6,0:2:0:1/1:49 | |
| 15471 chr11 44919413 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15472 chr11 44940016 . GC GCTAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15473 chr11 44940746 . C A 40 . DP=26;AF1=0.5;CI95=0.5,0.5;DP4=16,0,8,1;MQ=50;PV4=0.36,3.8e-09,0.094,1 PL:DP:SP:GT:GQ 70,0,237:25:0:0/1:73 | |
| 15474 chr11 44948696 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15475 chr11 44951579 . C G 8.44 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 39,6,0:2:0:1/1:49 | |
| 15476 chr11 44954848 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 15477 chr11 44955913 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15478 chr11 44956740 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 15479 chr11 44959206 . C A 20 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=1,8,0,6;MQ=48;PV4=1,0.045,1,1 PL:DP:SP:GT:GQ 50,0,169:15:0:0/1:53 | |
| 15480 chr11 44959213 . C T 83 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=0,5,1,6;MQ=47;PV4=1,8.3e-07,0.02,0.16 PL:DP:SP:GT:GQ 113,0,147:12:0:0/1:99 | |
| 15481 chr11 44981991 . GG GGCTAATCTG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15482 chr11 44985658 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15483 chr11 45020621 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15484 chr11 45024650 . cat c 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15485 chr11 45029332 . t tGGTATAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15486 chr11 45053517 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 15487 chr11 45059251 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15488 chr11 45063293 . G A 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 15489 chr11 45073843 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15490 chr11 45090627 . T TAATA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15491 chr11 45128569 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 15492 chr11 45129200 . GT GTAGCTTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15493 chr11 45136034 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 15494 chr11 45139926 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 15495 chr11 45141222 . ga gATa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15496 chr11 45143455 . C A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15497 chr11 45143802 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15498 chr11 45154111 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 15499 chr11 45171188 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 15500 chr11 45175885 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15501 chr11 45181034 . ttc t 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 15502 chr11 45190617 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 15503 chr11 45195472 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15504 chr11 45209101 . A AAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15505 chr11 45230328 . TCC TCCCC 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15506 chr11 45236025 . C T 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 15507 chr11 45240375 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15508 chr11 45258689 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15509 chr11 45259944 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 15510 chr11 45264689 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15511 chr11 45267312 . TA TAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15512 chr11 45275334 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 15513 chr11 45277877 . c cAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15514 chr11 45279918 . C A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 15515 chr11 45282302 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15516 chr11 45293289 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15517 chr11 45295413 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 15518 chr11 45318372 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15519 chr11 45322036 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 15520 chr11 45358412 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 15521 chr11 45390276 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 15522 chr11 45390923 . G A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 15523 chr11 45418692 . gagaagaa gagaa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15524 chr11 45418908 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 15525 chr11 45419233 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15526 chr11 45421672 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15527 chr11 45432820 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 15528 chr11 45462696 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15529 chr11 45473698 . a aTG 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 15530 chr11 45485684 . C A 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 15531 chr11 45487118 . TG TGAG 7.57 . INDEL;DP=2;AF1=0.5336;CI95=0.5,1;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,9:2:0:0/1:12 | |
| 15532 chr11 45498874 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15533 chr11 45502082 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15534 chr11 45510994 . T A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 15535 chr11 45535286 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15536 chr11 45549557 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15537 chr11 45574592 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15538 chr11 45574974 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15539 chr11 45601216 . C G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 15540 chr11 45609464 . a aTGTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15541 chr11 45632663 . A C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 15542 chr11 45636833 . G T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15543 chr11 45637264 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15544 chr11 45643216 . gctat g 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15545 chr11 45660586 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 15546 chr11 45677029 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15547 chr11 45680931 . G A 10.2 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 41,6,0:2:0:1/1:49 | |
| 15548 chr11 45688996 . A G 5.46 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 15549 chr11 45690570 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 15550 chr11 45697072 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15551 chr11 45700109 . TGG TGGTCGTCGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15552 chr11 45703320 . AT ATATT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15553 chr11 45705444 . G GAACTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15554 chr11 45717882 . C G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 15555 chr11 45722254 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15556 chr11 45726286 . C CATATACC 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 15557 chr11 45730341 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=46 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15558 chr11 45739665 . CACT C 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15559 chr11 45754877 . G C 5.56 . DP=2;AF1=0.5162;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,12:2:0:0/1:15 | |
| 15560 chr11 45763232 . T G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 15561 chr11 45765397 . ATG A 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 15562 chr11 45767698 . T TCCTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15563 chr11 45779054 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 15564 chr11 45810121 . tt tTCATGt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15565 chr11 45832211 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 15566 chr11 45877529 . A G 33.5 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=49 PL:DP:SP:GT:GQ 66,12,0:4:0:1/1:72 | |
| 15567 chr11 45909728 . G GCA 9.05 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 15568 chr11 45911760 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15569 chr11 45925494 . G T 20 . DP=28;AF1=0.5;CI95=0.5,0.5;DP4=13,0,5,0;MQ=48;PV4=1,0.054,0.0012,1 PL:DP:SP:GT:GQ 50,0,188:18:0:0/1:53 | |
| 15570 chr11 45926445 . T C 42 . DP=36;AF1=0.5;CI95=0.5,0.5;DP4=6,17,2,8;MQ=50;PV4=1,9.7e-08,0.013,1 PL:DP:SP:GT:GQ 72,0,255:33:0:0/1:75 | |
| 15571 chr11 45926773 . C G 8.69 . DP=7;AF1=0.5063;CI95=0.5,0.5;DP4=0,1,0,2;MQ=44;PV4=1,1,0.12,1 PL:DP:SP:GT:GQ 38,0,16:3:0:0/1:19 | |
| 15572 chr11 45935384 . A G 99 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=3,5,1,7;MQ=48;PV4=0.57,2.2e-08,1.9e-06,0.12 PL:DP:SP:GT:GQ 141,0,255:16:2:0/1:99 | |
| 15573 chr11 45937267 . C T 99 . DP=26;AF1=1;CI95=1,1;DP4=1,1,7,16;MQ=44;PV4=1,1,3.1e-09,1 PL:DP:SP:GT:GQ 255,38,0:25:0:1/1:99 | |
| 15574 chr11 45944985 . A G 6.2 . DP=15;AF1=0.4999;CI95=0.5,0.5;DP4=8,0,4,0;MQ=50;PV4=1,0.0013,0.0022,1 PL:DP:SP:GT:GQ 35,0,187:12:0:0/1:38 | |
| 15575 chr11 45944994 . GC GCC 60.5 . INDEL;DP=22;AF1=0.5;CI95=0.5,0.5;DP4=11,0,7,0;MQ=50;PV4=1,0.27,0.11,0.16 PL:DP:SP:GT:GQ 98,0,131:18:0:0/1:99 | |
| 15576 chr11 45948889 . G A 26 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=3,5,3,1;MQ=49;PV4=0.55,0.00094,0.083,1 PL:DP:SP:GT:GQ 56,0,255:12:3:0/1:59 | |
| 15577 chr11 45949373 . A G 4.14 . DP=3;AF1=0.5024;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,20:2:0:0/1:23 | |
| 15578 chr11 45955484 . G T 28 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=2,1,2,1;MQ=47;PV4=1,0.068,0.0086,0.16 PL:DP:SP:GT:GQ 58,0,82:6:0:0/1:61 | |
| 15579 chr11 45959669 . C T 13 . DP=22;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=49 PL:DP:SP:GT:GQ 44,6,0:2:0:1/1:49 | |
| 15580 chr11 45959913 . T G,A 3.98 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=49 PL:DP:SP:GT:GQ 46,19,32,13,0,32:3:0:1/1:49 | |
| 15581 chr11 45965052 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 15582 chr11 45989979 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15583 chr11 46001229 . G C 87 . DP=34;AF1=1;CI95=1,1;DP4=0,0,26,2;MQ=50 PL:DP:SP:GT:GQ 120,84,0:28:0:1/1:99 | |
| 15584 chr11 46031715 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15585 chr11 46032506 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15586 chr11 46033406 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 15587 chr11 46038734 . C G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 15588 chr11 46041788 . C T 18.8 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=45 PL:DP:SP:GT:GQ 50,6,0:2:0:1/1:49 | |
| 15589 chr11 46042661 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 15590 chr11 46051570 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15591 chr11 46065300 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15592 chr11 46077259 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 15593 chr11 46078992 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 15594 chr11 46081811 . aatg a 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 15595 chr11 46085227 . G GCTTTGTGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15596 chr11 46105688 . G A 41.1 . DP=27;AF1=1;CI95=1,1;DP4=0,0,7,0;MQ=50 PL:DP:SP:GT:GQ 74,21,0:7:0:1/1:84 | |
| 15597 chr11 46124541 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 15598 chr11 46181313 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 15599 chr11 46197965 . GC GCAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15600 chr11 46221167 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 15601 chr11 46221700 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 15602 chr11 46222964 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15603 chr11 46267421 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15604 chr11 46268793 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15605 chr11 46272956 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 15606 chr11 46295865 . T C 3.01 . DP=3;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=42;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,34:2:0:0/1:32 | |
| 15607 chr11 46315203 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15608 chr11 46355999 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 15609 chr11 46371299 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 15610 chr11 46371429 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 15611 chr11 46392825 . C G 89 . DP=26;AF1=1;CI95=1,1;DP4=0,0,11,0;MQ=48 PL:DP:SP:GT:GQ 122,33,0:11:0:1/1:99 | |
| 15612 chr11 46393958 . T C 4.77 . DP=19;AF1=0.4999;CI95=0.5,0.5;DP4=7,0,3,0;MQ=49;PV4=1,0.0084,0.012,1 PL:DP:SP:GT:GQ 33,0,176:10:0:0/1:36 | |
| 15613 chr11 46406745 . G C 3.55 . DP=2;AF1=0.5011;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,23:2:0:0/1:25 | |
| 15614 chr11 46421478 . gct gCTct 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15615 chr11 46424796 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15616 chr11 46429972 . ATGG A 6.56 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 15617 chr11 46436789 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 15618 chr11 46447024 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15619 chr11 46454406 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15620 chr11 46469417 . T TCA 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 15621 chr11 46477109 . T TTAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15622 chr11 46478340 . G C 3.01 . DP=3;AF1=0.4997;CI95=0.5,0.5;DP4=0,2,1,0;MQ=47;PV4=0.33,0.012,0.037,0.15 PL:DP:SP:GT:GQ 30,0,82:3:0:0/1:33 | |
| 15623 chr11 46478449 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15624 chr11 46516655 . T TGTA 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 15625 chr11 46541046 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 15626 chr11 46577244 . T C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 15627 chr11 46579793 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 15628 chr11 46583152 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15629 chr11 46628505 . c cGACAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15630 chr11 46631025 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15631 chr11 46674357 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15632 chr11 46682886 . T C 5.79 . DP=2;AF1=0.8277;CI95=0.5,1;DP4=1,0,1,0;MQ=30;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,1:2:0:1/1:5 | |
| 15633 chr11 46687093 . C G 4.13 . DP=34;AF1=0.4998;CI95=0.5,0.5;DP4=9,11,0,5;MQ=49;PV4=0.12,0.0051,0.00019,0.18 PL:DP:SP:GT:GQ 32,0,255:25:9:0/1:35 | |
| 15634 chr11 46702920 . T C 14.7 . DP=43;AF1=0.5718;CI95=0.5,1;DP4=0,1,2,1;MQ=49;PV4=1,1,0.24,0.18 PL:DP:SP:GT:GQ 44,0,6:4:0:0/1:8 | |
| 15635 chr11 46720180 . G GTTAAGTCGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15636 chr11 46722731 . T C 21 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=49 PL:DP:SP:GT:GQ 53,9,0:3:0:1/1:63 | |
| 15637 chr11 46731529 . t tTCCTGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15638 chr11 46742426 . G A 13.4 . DP=14;AF1=0.7303;CI95=0.5,1;DP4=0,1,0,4;MQ=50;PV4=1,1,0.34,1 PL:DP:SP:GT:GQ 42,0,2:5:0:0/1:3 | |
| 15639 chr11 46751237 . t tATCCG 8.18 . INDEL;DP=6;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,2;MQ=50;PV4=1,0.26,1,0.15 PL:DP:SP:GT:GQ 45,0,138:6:0:0/1:48 | |
| 15640 chr11 46766890 . T C 5.46 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 15641 chr11 46767205 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15642 chr11 46770326 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15643 chr11 46789490 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 15644 chr11 46791429 . AT ATCT 12.7 . INDEL;DP=9;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15645 chr11 46834117 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 15646 chr11 46867196 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15647 chr11 46869407 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15648 chr11 46875009 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15649 chr11 46889719 . T C 99 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,10;MQ=46;PV4=1,0.15,0.0012,1 PL:DP:SP:GT:GQ 141,0,86:14:0:0/1:89 | |
| 15650 chr11 46890165 . C T 21 . DP=20;AF1=0.5;CI95=0.5,0.5;DP4=5,2,3,1;MQ=49;PV4=1,0.0059,0.0015,1 PL:DP:SP:GT:GQ 51,0,212:11:0:0/1:54 | |
| 15651 chr11 46892692 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 15652 chr11 46897972 . G C 3.01 . DP=8;AF1=0.4997;CI95=0.5,0.5;DP4=5,0,2,0;MQ=49;PV4=1,0.28,0.0064,1 PL:DP:SP:GT:GQ 30,0,85:7:0:0/1:33 | |
| 15653 chr11 46898905 . G T 9.52 . DP=6;AF1=0.5;CI95=0.5,0.5;DP4=0,4,1,1;MQ=47;PV4=0.33,1e-05,0.0017,1 PL:DP:SP:GT:GQ 39,0,138:6:0:0/1:42 | |
| 15654 chr11 46905384 . G A 4.13 . DP=13;AF1=0.4998;CI95=0.5,0.5;DP4=5,0,3,0;MQ=49;PV4=1,0.016,0.21,1 PL:DP:SP:GT:GQ 32,0,99:8:0:0/1:35 | |
| 15655 chr11 46911457 . T C 35 . DP=26;AF1=0.5;CI95=0.5,0.5;DP4=18,0,6,0;MQ=49;PV4=1,1.7e-09,2.3e-10,0.33 PL:DP:SP:GT:GQ 65,0,240:24:0:0/1:68 | |
| 15656 chr11 46911704 . C T 99 . DP=27;AF1=1;CI95=1,1;DP4=0,0,0,25;MQ=48 PL:DP:SP:GT:GQ 136,75,0:25:0:1/1:99 | |
| 15657 chr11 46914583 . T C 33.5 . DP=17;AF1=1;CI95=0.5,1;DP4=0,0,1,3;MQ=48 PL:DP:SP:GT:GQ 66,12,0:4:0:1/1:72 | |
| 15658 chr11 46914598 . A G 99 . DP=17;AF1=1;CI95=0.5,1;DP4=0,1,6,3;MQ=45;PV4=0.4,1,0.075,1 PL:DP:SP:GT:GQ 192,12,0:10:0:1/1:72 | |
| 15659 chr11 46920315 . C CAAG 3.25 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=1,2,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,114:4:0:0/1:41 | |
| 15660 chr11 46932624 . C T 7.59 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 38,6,0:2:0:1/1:49 | |
| 15661 chr11 46974878 . t tTA 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 15662 chr11 47054356 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15663 chr11 47054986 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 15664 chr11 47063145 . C T 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15665 chr11 47096921 . caa cAACTAGaa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15666 chr11 47098740 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 15667 chr11 47110399 . A ACCAGAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15668 chr11 47131144 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15669 chr11 47133123 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15670 chr11 47146888 . G GCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15671 chr11 47157456 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15672 chr11 47175087 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 15673 chr11 47182774 . G T 27.5 . DP=14;AF1=0.5718;CI95=0.5,1;DP4=0,1,0,5;MQ=48;PV4=1,0.26,0.26,0.49 PL:DP:SP:GT:GQ 57,0,6:6:0:0/1:8 | |
| 15674 chr11 47188314 . T C 8.87 . DP=22;AF1=0.5336;CI95=0.5,1;DP4=0,1,0,3;MQ=49;PV4=1,0.34,0.29,1 PL:DP:SP:GT:GQ 38,0,9:4:0:0/1:12 | |
| 15675 chr11 47188411 . C T 96 . DP=23;AF1=0.504;CI95=0.5,0.5;DP4=1,1,5,5;MQ=49;PV4=1,0.11,0.19,1 PL:DP:SP:GT:GQ 126,0,18:12:0:0/1:21 | |
| 15676 chr11 47189813 . A G 11.3 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=5,8,0,5;MQ=49;PV4=0.25,0.026,0.00079,0.16 PL:DP:SP:GT:GQ 41,0,250:18:6:0/1:44 | |
| 15677 chr11 47193325 . G A 4.13 . DP=32;AF1=0.4998;CI95=0.5,0.5;DP4=5,11,5,0;MQ=49;PV4=0.012,0.0028,0.00062,0.17 PL:DP:SP:GT:GQ 32,0,255:21:19:0/1:35 | |
| 15678 chr11 47204175 . A T 8.44 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 39,6,0:2:0:1/1:49 | |
| 15679 chr11 47231335 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15680 chr11 47231344 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15681 chr11 47238522 . T C 99 . DP=48;AF1=1;CI95=1,1;DP4=1,0,4,7;MQ=48;PV4=0.42,1,0.31,1 PL:DP:SP:GT:GQ 143,19,0:12:0:1/1:76 | |
| 15682 chr11 47259776 . C CAACTTTG 3.25 . INDEL;DP=7;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,100:4:0:0/1:41 | |
| 15683 chr11 47260272 . T C 12 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=44 PL:DP:SP:GT:GQ 43,6,0:2:0:1/1:49 | |
| 15684 chr11 47260319 . A G 8.44 . DP=9;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=49 PL:DP:SP:GT:GQ 39,6,0:2:0:1/1:49 | |
| 15685 chr11 47264315 . C G 8.44 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47 PL:DP:SP:GT:GQ 39,6,0:2:0:1/1:49 | |
| 15686 chr11 47266762 . G A 7.8 . DP=6;AF1=0.5;CI95=0.5,0.5;DP4=3,0,3,0;MQ=49;PV4=1,0.065,0.12,1 PL:DP:SP:GT:GQ 37,0,88:6:0:0/1:40 | |
| 15687 chr11 47267079 . C T 79 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=0,5,2,4;MQ=48;PV4=0.45,0.025,0.00041,1 PL:DP:SP:GT:GQ 109,0,120:11:3:0/1:99 | |
| 15688 chr11 47269159 . T C 17.1 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=48 PL:DP:SP:GT:GQ 49,9,0:3:0:1/1:63 | |
| 15689 chr11 47270255 . C T 30 . DP=11;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=47 PL:DP:SP:GT:GQ 62,9,0:3:0:1/1:63 | |
| 15690 chr11 47282024 . C T 76 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=3,1,3,3;MQ=48;PV4=0.57,0.00082,0.037,0.24 PL:DP:SP:GT:GQ 106,0,141:10:2:0/1:99 | |
| 15691 chr11 47286976 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15692 chr11 47300535 . A G 99 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=4,0,7,0;MQ=46;PV4=1,1,0,1 PL:DP:SP:GT:GQ 158,0,105:11:0:0/1:99 | |
| 15693 chr11 47305669 . T G 9.53 . DP=15;AF1=0.5012;CI95=0.5,0.5;DP4=2,0,3,0;MQ=49;PV4=1,0.49,0.25,1 PL:DP:SP:GT:GQ 39,0,23:5:0:0/1:26 | |
| 15694 chr11 47308247 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 15695 chr11 47311110 . T C 6.2 . DP=5;AF1=0.5009;CI95=0.5,0.5;DP4=1,0,0,2;MQ=49;PV4=0.33,0.14,0.23,1 PL:DP:SP:GT:GQ 35,0,24:3:0:0/1:27 | |
| 15696 chr11 47314328 . C CTTA 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=1,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,91:3:0:0/1:44 | |
| 15697 chr11 47315274 . T A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 15698 chr11 47317042 . T C 47 . DP=28;AF1=0.5;CI95=0.5,0.5;DP4=5,0,7,0;MQ=49;PV4=1,0.22,0.026,0.018 PL:DP:SP:GT:GQ 77,0,67:12:0:0/1:70 | |
| 15699 chr11 47317647 . T A 3.54 . DP=11;AF1=0.4998;CI95=0.5,0.5;DP4=0,2,0,3;MQ=49;PV4=1,0.0047,0.037,1 PL:DP:SP:GT:GQ 31,0,58:5:0:0/1:34 | |
| 15700 chr11 47323728 . A C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 15701 chr11 47331115 . G GC 49.6 . INDEL;DP=64;AF1=0.9966;CI95=0.5,1;DP4=1,0,1,3;MQ=50;PV4=0.4,1,1,1 PL:DP:SP:GT:GQ 86,1,0:5:0:1/1:23 | |
| 15702 chr11 47331116 . T C 86.1 . DP=64;AF1=1;CI95=1,1;DP4=0,1,2,11;MQ=49;PV4=1,0.33,0.24,1 PL:DP:SP:GT:GQ 119,21,0:14:0:1/1:84 | |
| 15703 chr11 47334948 . cct cCTCGTAGGAATct 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15704 chr11 47342520 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 15705 chr11 47345100 . T C 31.8 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=45 PL:DP:SP:GT:GQ 63,6,0:2:0:1/1:49 | |
| 15706 chr11 47350553 . G C 73 . DP=33;AF1=1;CI95=1,1;DP4=1,0,18,0;MQ=48;PV4=1,0.22,0.21,1 PL:DP:SP:GT:GQ 106,32,0:19:0:1/1:99 | |
| 15707 chr11 47353081 . A T 11.3 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 15708 chr11 47362528 . CA CATA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15709 chr11 47366995 . G GC 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15710 chr11 47377893 . TCACACACAC TCACACAC 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 15711 chr11 47378277 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15712 chr11 47378753 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15713 chr11 47380489 . CTCATC CTC 3.25 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,0.12,1,0.35 PL:DP:SP:GT:GQ 38,0,83:3:0:0/1:41 | |
| 15714 chr11 47391934 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15715 chr11 47410116 . tc tCc 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 15716 chr11 47427508 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 15717 chr11 47431703 . A G 20 . DP=23;AF1=0.5;CI95=0.5,0.5;DP4=0,17,0,6;MQ=49;PV4=1,6.2e-10,0.00017,1 PL:DP:SP:GT:GQ 50,0,239:23:0:0/1:53 | |
| 15718 chr11 47432034 . G C 35 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=0,8,0,11;MQ=50;PV4=1,2.3e-12,0.17,1 PL:DP:SP:GT:GQ 65,0,190:19:0:0/1:68 | |
| 15719 chr11 47440283 . T A 22.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 54,6,0:2:0:1/1:49 | |
| 15720 chr11 47457402 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15721 chr11 47464991 . c cG 3.25 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15722 chr11 47473752 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 15723 chr11 47489974 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15724 chr11 47502357 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15725 chr11 47503908 . A C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 15726 chr11 47528540 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 15727 chr11 47593264 . C A 3.57 . DP=18;AF1=0.5048;CI95=0.5,0.5;DP4=0,1,0,2;MQ=47;PV4=1,0.24,0.24,1 PL:DP:SP:GT:GQ 31,0,17:3:0:0/1:20 | |
| 15728 chr11 47599714 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15729 chr11 47603671 . A T 5.46 . DP=37;AF1=0.4999;CI95=0.5,0.5;DP4=4,15,4,1;MQ=48;PV4=0.028,0.049,0.29,0.17 PL:DP:SP:GT:GQ 34,0,255:24:16:0/1:37 | |
| 15730 chr11 47603682 . C A 16.1 . DP=33;AF1=0.5;CI95=0.5,0.5;DP4=1,6,2,5;MQ=48;PV4=1,0.0049,0.11,1 PL:DP:SP:GT:GQ 46,0,177:14:0:0/1:49 | |
| 15731 chr11 47603685 . G C 21 . DP=37;AF1=0.5;CI95=0.5,0.5;DP4=6,7,0,6;MQ=48;PV4=0.11,0.045,0.26,1 PL:DP:SP:GT:GQ 51,0,246:19:10:0/1:54 | |
| 15732 chr11 47610337 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15733 chr11 47614295 . G GGC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 15734 chr11 47621070 . A T 4.78 . DP=3;AF1=0.5024;CI95=0.5,0.5;DP4=0,1,1,1;MQ=44;PV4=1,0.068,0.11,0.12 PL:DP:SP:GT:GQ 33,0,20:3:0:0/1:23 | |
| 15735 chr11 47621072 . A T 5.46 . DP=3;AF1=0.5001;CI95=0.5,0.5;DP4=0,1,1,1;MQ=44;PV4=1,0.015,0.11,0.12 PL:DP:SP:GT:GQ 34,0,31:3:0:0/1:32 | |
| 15736 chr11 47621850 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15737 chr11 47624626 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15738 chr11 47636236 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 15739 chr11 47640355 . C T 73.1 . DP=11;AF1=0.508;CI95=0.5,0.5;DP4=1,0,8,0;MQ=46;PV4=1,0.066,0.16,1 PL:DP:SP:GT:GQ 103,0,15:9:0:0/1:18 | |
| 15740 chr11 47640367 . T A 16.1 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=3,3,5,0;MQ=48;PV4=0.18,4.8e-05,0.016,1 PL:DP:SP:GT:GQ 46,0,208:11:7:0/1:49 | |
| 15741 chr11 47652523 . T C 3.54 . DP=6;AF1=0.4998;CI95=0.5,0.5;DP4=3,0,1,0;MQ=48;PV4=1,0.41,0,1 PL:DP:SP:GT:GQ 31,0,103:4:0:0/1:34 | |
| 15742 chr11 47652630 . A T 6.2 . DP=12;AF1=0.4999;CI95=0.5,0.5;DP4=0,4,2,0;MQ=49;PV4=0.067,0.085,0.089,0.29 PL:DP:SP:GT:GQ 35,0,127:6:12:0/1:38 | |
| 15743 chr11 47653389 . CTG C 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15744 chr11 47688459 . G A 12.3 . DP=5;AF1=0.5;CI95=0.5,0.5;DP4=1,0,3,0;MQ=49;PV4=1,0.013,0.26,1 PL:DP:SP:GT:GQ 42,0,38:4:0:0/1:40 | |
| 15745 chr11 47704200 . T G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 15746 chr11 47727590 . A C 13.2 . DP=8;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,3;MQ=49;PV4=1,0.054,0.14,1 PL:DP:SP:GT:GQ 43,0,63:5:0:0/1:46 | |
| 15747 chr11 47736314 . C G 46 . DP=12;AF1=1;CI95=1,1;DP4=0,0,0,8;MQ=50 PL:DP:SP:GT:GQ 79,24,0:8:0:1/1:96 | |
| 15748 chr11 47741422 . CA CAGAGA 20.5 . INDEL;DP=18;AF1=0.5;CI95=0.5,0.5;DP4=7,0,2,0;MQ=50;PV4=1,1,1,0.41 PL:DP:SP:GT:GQ 58,0,167:9:0:0/1:61 | |
| 15749 chr11 47745794 . T C 4.13 . DP=8;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,1;MQ=44;PV4=1,0.066,0.3,1 PL:DP:SP:GT:GQ 32,0,32:3:0:0/1:32 | |
| 15750 chr11 47756167 . gct g 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 15751 chr11 47771108 . a aTC 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 15752 chr11 47771889 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15753 chr11 47775757 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 15754 chr11 47776047 . G A 52.3 . DP=41;AF1=1;CI95=0.5,1;DP4=0,0,2,3;MQ=48 PL:DP:SP:GT:GQ 85,15,0:5:0:1/1:75 | |
| 15755 chr11 47776283 . C T 34 . DP=13;AF1=0.5;CI95=0.5,0.5;DP4=0,6,0,4;MQ=49;PV4=1,0.019,0.009,1 PL:DP:SP:GT:GQ 64,0,156:10:0:0/1:67 | |
| 15756 chr11 47790301 . T C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 15757 chr11 47809906 . T C 4.77 . DP=13;AF1=0.4999;CI95=0.5,0.5;DP4=1,2,0,2;MQ=48;PV4=1,1,0,1 PL:DP:SP:GT:GQ 33,0,51:5:0:0/1:36 | |
| 15758 chr11 47813436 . C T 48 . DP=9;AF1=1;CI95=1,1;DP4=0,0,8,0;MQ=50 PL:DP:SP:GT:GQ 81,24,0:8:0:1/1:96 | |
| 15759 chr11 47814442 . G A 10.4 . DP=26;AF1=0.5;CI95=0.5,0.5;DP4=4,6,4,0;MQ=49;PV4=0.085,0.0086,0.00024,1 PL:DP:SP:GT:GQ 40,0,252:14:11:0/1:43 | |
| 15760 chr11 47820599 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15761 chr11 47828558 . A G 27 . DP=10;AF1=0.5;CI95=0.5,0.5;DP4=6,0,3,0;MQ=48;PV4=1,0.21,1.2e-05,1 PL:DP:SP:GT:GQ 57,0,139:9:0:0/1:60 | |
| 15762 chr11 47834346 . G A 37 . DP=8;AF1=0.5;CI95=0.5,0.5;DP4=3,0,5,0;MQ=49;PV4=1,0.00022,0.24,1 PL:DP:SP:GT:GQ 67,0,104:8:0:0/1:70 | |
| 15763 chr11 47834592 . G A 73 . DP=11;AF1=1;CI95=1,1;DP4=0,0,0,11;MQ=49 PL:DP:SP:GT:GQ 106,33,0:11:0:1/1:99 | |
| 15764 chr11 47837638 . G A 62.3 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=46 PL:DP:SP:GT:GQ 95,15,0:5:0:1/1:75 | |
| 15765 chr11 47857253 . T C 99 . DP=75;AF1=0.5;CI95=0.5,0.5;DP4=24,19,12,14;MQ=49;PV4=0.47,1.5e-13,4.2e-07,1 PL:DP:SP:GT:GQ 208,0,255:69:3:0/1:99 | |
| 15766 chr11 47873839 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15767 chr11 47903667 . G C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 15768 chr11 47905186 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15769 chr11 47922672 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 15770 chr11 47929148 . A G 25.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47 PL:DP:SP:GT:GQ 57,6,0:2:0:1/1:49 | |
| 15771 chr11 47957693 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 15772 chr11 48001895 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15773 chr11 48021360 . C G 3.54 . DP=3;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,0,2;MQ=49;PV4=0.33,0.035,0,0.39 PL:DP:SP:GT:GQ 31,0,41:3:0:0/1:34 | |
| 15774 chr11 48065605 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 15775 chr11 48118080 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 15776 chr11 48121406 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 15777 chr11 48126172 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15778 chr11 48145928 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 15779 chr11 48160883 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15780 chr11 48166267 . G C 19.1 . DP=27;AF1=0.5;CI95=0.5,0.5;DP4=0,8,5,1;MQ=50;PV4=0.003,0.00056,0.28,1 PL:DP:SP:GT:GQ 49,0,175:14:25:0/1:52 | |
| 15781 chr11 48166901 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15782 chr11 48181721 . G T 20 . DP=9;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=48 PL:DP:SP:GT:GQ 52,9,0:3:0:1/1:63 | |
| 15783 chr11 48185160 . GT GTAT 3.25 . INDEL;DP=7;AF1=0.5;CI95=0.5,0.5;DP4=1,2,0,1;MQ=50;PV4=1,1,1,0.29 PL:DP:SP:GT:GQ 38,0,90:4:0:0/1:41 | |
| 15784 chr11 48192498 . TTG T 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 15785 chr11 48203586 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 15786 chr11 48203734 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15787 chr11 48229293 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 15788 chr11 48231063 . T TCCCTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15789 chr11 48234063 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 15790 chr11 48238421 . T G 93.1 . DP=49;AF1=1;CI95=1,1;DP4=0,0,5,2;MQ=48 PL:DP:SP:GT:GQ 126,21,0:7:0:1/1:84 | |
| 15791 chr11 48242764 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15792 chr11 48249843 . T C 3.54 . DP=4;AF1=0.4998;CI95=0.5,0.5;DP4=0,3,0,1;MQ=48;PV4=1,1,0,1 PL:DP:SP:GT:GQ 31,0,87:4:0:0/1:34 | |
| 15793 chr11 48266582 . A C 99 . DP=19;AF1=1;CI95=1,1;DP4=0,0,15,0;MQ=46 PL:DP:SP:GT:GQ 164,45,0:15:0:1/1:99 | |
| 15794 chr11 48267589 . A G 99 . DP=45;AF1=1;CI95=1,1;DP4=0,0,1,38;MQ=46 PL:DP:SP:GT:GQ 213,117,0:39:0:1/1:99 | |
| 15795 chr11 48279805 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 15796 chr11 48285842 . A G 14.2 . DP=50;AF1=0.5001;CI95=0.5,0.5;DP4=1,1,2,1;MQ=50;PV4=1,0.34,0.25,1 PL:DP:SP:GT:GQ 44,0,32:5:0:0/1:35 | |
| 15797 chr11 48285856 . C T 58 . DP=49;AF1=0.5;CI95=0.5,0.5;DP4=15,20,3,7;MQ=49;PV4=0.72,7e-05,1.9e-09,1 PL:DP:SP:GT:GQ 88,0,255:45:1:0/1:91 | |
| 15798 chr11 48285981 . CCTTCTTC CCTTC 99 . INDEL;DP=35;AF1=0.5;CI95=0.5,0.5;DP4=10,6,12,4;MQ=50;PV4=0.7,0.0084,1,1 PL:DP:SP:GT:GQ 255,0,255:32:2:0/1:99 | |
| 15799 chr11 48289134 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 15800 chr11 48298925 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15801 chr11 48328644 . C T 99 . DP=32;AF1=0.5;CI95=0.5,0.5;DP4=4,19,2,5;MQ=49;PV4=0.6,0.00023,2.7e-12,1 PL:DP:SP:GT:GQ 134,0,255:30:2:0/1:99 | |
| 15802 chr11 48332700 . G A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 15803 chr11 48340360 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15804 chr11 48346472 . A C 23 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=1,5,4,0;MQ=48;PV4=0.048,0.058,0.0078,1 PL:DP:SP:GT:GQ 53,0,145:10:13:0/1:56 | |
| 15805 chr11 48346916 . G C 17.1 . DP=50;AF1=0.5;CI95=0.5,0.5;DP4=9,24,2,7;MQ=48;PV4=1,0.00015,0.00059,1 PL:DP:SP:GT:GQ 47,0,255:42:0:0/1:50 | |
| 15806 chr11 48347140 . T C 47 . DP=11;AF1=0.5;CI95=0.5,0.5;DP4=0,6,0,4;MQ=48;PV4=1,0.21,0.0028,1 PL:DP:SP:GT:GQ 77,0,134:10:0:0/1:80 | |
| 15807 chr11 48347267 . T C 46 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=11,2,8,0;MQ=49;PV4=0.5,3.2e-08,1.1e-08,1 PL:DP:SP:GT:GQ 76,0,255:21:3:0/1:79 | |
| 15808 chr11 48347419 . A G 4.77 . DP=32;AF1=0.4999;CI95=0.5,0.5;DP4=2,23,1,6;MQ=49;PV4=0.54,1.4e-05,2e-05,1 PL:DP:SP:GT:GQ 33,0,255:32:3:0/1:36 | |
| 15809 chr11 48349329 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15810 chr11 48354452 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15811 chr11 48356402 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 15812 chr11 48361875 . G T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 15813 chr11 48367398 . C A 8.64 . DP=7;AF1=0.5;CI95=0.5,0.5;DP4=3,0,3,0;MQ=47;PV4=1,0.071,0.35,1 PL:DP:SP:GT:GQ 38,0,82:6:0:0/1:41 | |
| 15814 chr11 48376048 . AT ATTCCATTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15815 chr11 48384036 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15816 chr11 48387419 . CAGA CAGAGA 7.57 . INDEL;DP=3;AF1=0.5336;CI95=0.5,1;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,9:2:0:0/1:12 | |
| 15817 chr11 48387490 . G A 56 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=1,5,1,5;MQ=49;PV4=1,8.1e-05,0.017,1 PL:DP:SP:GT:GQ 86,0,184:12:0:0/1:89 | |
| 15818 chr11 48389910 . g gAGAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15819 chr11 48400663 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15820 chr11 48454107 . C T 7.8 . DP=3;AF1=0.5006;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,26:2:0:0/1:29 | |
| 15821 chr11 48454400 . A ACG 3.25 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=1,2,1,0;MQ=50;PV4=1,1,1,0.3 PL:DP:SP:GT:GQ 38,0,84:4:0:0/1:41 | |
| 15822 chr11 48458397 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 15823 chr11 48461517 . A C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15824 chr11 48465631 . A G 14.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 15825 chr11 48482812 . c cTGCTGGT 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=49 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 15826 chr11 48486066 . C T 25 . DP=3;AF1=0.5001;CI95=0.5,0.5;DP4=1,0,1,1;MQ=45;PV4=1,0.05,0.061,1 PL:DP:SP:GT:GQ 55,0,34:3:0:0/1:37 | |
| 15827 chr11 48486093 . A AGTCG 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=48;PV4=1,1,1,0.24 PL:DP:SP:GT:GQ 41,0,58:3:0:0/1:44 | |
| 15828 chr11 48486915 . T A 11.3 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 15829 chr11 48510344 . C G 5.46 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 15830 chr11 48510412 . A G 4.13 . DP=5;AF1=0.4998;CI95=0.5,0.5;DP4=2,1,0,2;MQ=47;PV4=0.4,0.011,0.27,0.42 PL:DP:SP:GT:GQ 32,0,118:5:4:0/1:35 | |
| 15831 chr11 48510587 . A T 5.46 . DP=5;AF1=0.4999;CI95=0.5,0.5;DP4=1,1,1,0;MQ=45;PV4=1,1,0.33,1 PL:DP:SP:GT:GQ 34,0,54:3:0:0/1:37 | |
| 15832 chr11 48510919 . C A 36 . DP=13;AF1=0.5;CI95=0.5,0.5;DP4=1,7,0,4;MQ=47;PV4=1,0.38,0.009,1 PL:DP:SP:GT:GQ 66,0,158:12:0:0/1:69 | |
| 15833 chr11 48510940 . C A 8.64 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=0,6,0,3;MQ=47;PV4=1,1,0.43,1 PL:DP:SP:GT:GQ 38,0,83:9:0:0/1:41 | |
| 15834 chr11 48513165 . TACACACACACACA TACACACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15835 chr11 48515828 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15836 chr11 48525697 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15837 chr11 48587375 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 15838 chr11 48639371 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15839 chr11 48654721 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 15840 chr11 48657760 . G C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 15841 chr11 48668294 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 15842 chr11 48692668 . T G 14.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=46 PL:DP:SP:GT:GQ 46,6,0:2:0:1/1:49 | |
| 15843 chr11 48735429 . A T 6.79 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=49 PL:DP:SP:GT:GQ 37,6,0:2:0:1/1:49 | |
| 15844 chr11 48738689 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15845 chr11 48739616 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15846 chr11 48739653 . A G 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15847 chr11 48748426 . G T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 15848 chr11 48778909 . T G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15849 chr11 48829019 . C A 3.43 . DP=2;AF1=0.6241;CI95=0.5,1;DP4=1,0,0,1;MQ=26;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,4:2:0:0/1:6 | |
| 15850 chr11 48834772 . C T 5.79 . DP=2;AF1=0.8277;CI95=0.5,1;DP4=1,0,0,1;MQ=29;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,1:2:0:1/1:5 | |
| 15851 chr11 48841481 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15852 chr11 48845118 . C T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 15853 chr11 48847945 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 15854 chr11 48852606 . C G 5.46 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 15855 chr11 48860860 . T A 6.98 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 15856 chr11 48861238 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15857 chr11 48878817 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 15858 chr11 48882666 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15859 chr11 48888174 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15860 chr11 48888912 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 15861 chr11 48889269 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 15862 chr11 48892324 . T G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15863 chr11 48892642 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15864 chr11 48893064 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 15865 chr11 48899051 . C G 29.1 . DP=16;AF1=1;CI95=1,1;DP4=1,0,2,9;MQ=14;PV4=0.25,7.4e-09,0.26,1 PL:DP:SP:GT:GQ 62,20,0:12:0:1/1:80 | |
| 15866 chr11 48899093 . C G 10 . DP=9;AF1=0.9998;CI95=0.5,1;DP4=1,0,2,3;MQ=14;PV4=1,0.29,0.32,1 PL:DP:SP:GT:GQ 39,2,0:6:0:1/1:37 | |
| 15867 chr11 48927762 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 15868 chr11 48928633 . A G 33 . DP=10;AF1=1;CI95=1,1;DP4=0,0,10,0;MQ=15 PL:DP:SP:GT:GQ 66,30,0:10:0:1/1:99 | |
| 15869 chr11 48930147 . G T 9.49 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=26 PL:DP:SP:GT:GQ 41,9,0:3:0:1/1:63 | |
| 15870 chr11 48932774 . G C 3.54 . DP=5;AF1=0.4998;CI95=0.5,0.5;DP4=2,0,1,2;MQ=45;PV4=0.4,0.00018,1,1 PL:DP:SP:GT:GQ 31,0,42:5:4:0/1:34 | |
| 15871 chr11 48933142 . gtt gTTTtt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15872 chr11 48937730 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15873 chr11 48958896 . T A 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15874 chr11 48961851 . G T 10.9 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,3,1;MQ=15 PL:DP:SP:GT:GQ 43,12,0:4:0:1/1:72 | |
| 15875 chr11 48963784 . T C 6.28 . DP=2;AF1=0.5128;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,13:2:0:0/1:16 | |
| 15876 chr11 48973261 . C G 6.98 . DP=9;AF1=0.4999;CI95=0.5,0.5;DP4=2,4,0,2;MQ=44;PV4=1,0.33,0.45,0.39 PL:DP:SP:GT:GQ 36,0,131:8:0:0/1:39 | |
| 15877 chr11 48973477 . G A 8.44 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 39,6,0:2:0:1/1:49 | |
| 15878 chr11 49000423 . C G 19 . DP=19;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=49 PL:DP:SP:GT:GQ 51,9,0:3:0:1/1:63 | |
| 15879 chr11 49010678 . A C 3.02 . DP=4;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15880 chr11 49013054 . C T 27 . DP=34;AF1=0.5;CI95=0.5,0.5;DP4=5,12,4,8;MQ=16;PV4=1,0.00087,0.07,0.21 PL:DP:SP:GT:GQ 57,0,98:29:0:0/1:60 | |
| 15881 chr11 49038549 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 15882 chr11 49041911 . C G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 15883 chr11 49059362 . C A 21.3 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,4,1;MQ=14 PL:DP:SP:GT:GQ 54,15,0:5:0:1/1:75 | |
| 15884 chr11 49081929 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15885 chr11 49085393 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15886 chr11 49092553 . A G 4.13 . DP=5;AF1=0.4998;CI95=0.5,0.5;DP4=0,2,0,2;MQ=48;PV4=1,0.037,0,0.49 PL:DP:SP:GT:GQ 32,0,72:4:0:0/1:35 | |
| 15887 chr11 49092564 . T G 4.26 . DP=4;AF1=0.5262;CI95=0.5,1;DP4=0,1,0,2;MQ=47;PV4=1,1,0,1 PL:DP:SP:GT:GQ 32,0,10:3:0:0/1:13 | |
| 15888 chr11 49098224 . T TTGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15889 chr11 49150898 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15890 chr11 49168405 . A T 13.2 . DP=6;AF1=0.5;CI95=0.5,0.5;DP4=1,1,2,0;MQ=47;PV4=1,0.041,0.033,1 PL:DP:SP:GT:GQ 43,0,78:4:0:0/1:46 | |
| 15891 chr11 49185516 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15892 chr11 49194894 . G A 76.3 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=45 PL:DP:SP:GT:GQ 109,15,0:5:0:1/1:75 | |
| 15893 chr11 49195005 . G A 3.01 . DP=3;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,2,0;MQ=49;PV4=0.33,0.041,0.33,1 PL:DP:SP:GT:GQ 30,0,41:3:0:0/1:33 | |
| 15894 chr11 49195090 . T C 83.5 . DP=6;AF1=0.9998;CI95=0.5,1;DP4=0,1,0,4;MQ=45;PV4=1,1,0.00061,1 PL:DP:SP:GT:GQ 113,2,0:5:0:1/1:37 | |
| 15895 chr11 49197409 . A ATT 7.35 . INDEL;DP=3;AF1=0.5001;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,35:2:0:0/1:37 | |
| 15896 chr11 49197491 . T A 3.01 . DP=4;AF1=0.4997;CI95=0.5,0.5;DP4=0,3,1,0;MQ=48;PV4=0.25,0.24,0.021,1 PL:DP:SP:GT:GQ 30,0,104:4:0:0/1:33 | |
| 15897 chr11 49203307 . C G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 15898 chr11 49207429 . T G 6.02 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=46 PL:DP:SP:GT:GQ 36,6,0:2:0:1/1:49 | |
| 15899 chr11 49207438 . T A 11.1 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=46 PL:DP:SP:GT:GQ 42,6,0:2:0:1/1:49 | |
| 15900 chr11 49221960 . T A 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15901 chr11 49227620 . A G 83.1 . DP=8;AF1=1;CI95=1,1;DP4=0,0,7,0;MQ=46 PL:DP:SP:GT:GQ 116,21,0:7:0:1/1:84 | |
| 15902 chr11 49227682 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15903 chr11 49234285 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 15904 chr11 49245477 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15905 chr11 49281264 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 15906 chr11 49286265 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15907 chr11 49306567 . TC TCAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15908 chr11 49314777 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 15909 chr11 49330418 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15910 chr11 49365786 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 15911 chr11 49372204 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15912 chr11 49430884 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15913 chr11 49431324 . C G 18 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=43 PL:DP:SP:GT:GQ 50,9,0:3:0:1/1:63 | |
| 15914 chr11 49431332 . G T 32.3 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=46 PL:DP:SP:GT:GQ 65,15,0:5:0:1/1:75 | |
| 15915 chr11 49431337 . T G 36.5 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=44 PL:DP:SP:GT:GQ 69,12,0:4:0:1/1:72 | |
| 15916 chr11 49437250 . G GAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15917 chr11 49461790 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15918 chr11 49507871 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15919 chr11 49538997 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15920 chr11 49555701 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 15921 chr11 49572917 . A T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 15922 chr11 49580789 . G GTAGCGTATA 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 15923 chr11 49597799 . C T 99 . DP=7;AF1=1;CI95=1,1;DP4=0,0,7,0;MQ=46 PL:DP:SP:GT:GQ 139,21,0:7:0:1/1:84 | |
| 15924 chr11 49617922 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 15925 chr11 49618497 . g gTTTCATCAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15926 chr11 49635481 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15927 chr11 49636328 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 15928 chr11 49641442 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15929 chr11 49667203 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15930 chr11 49719480 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15931 chr11 49726550 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 15932 chr11 49740345 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 15933 chr11 49755786 . g gAATGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15934 chr11 49770120 . C G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 15935 chr11 49778902 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 15936 chr11 49805413 . A C 3.01 . DP=3;AF1=0.4997;CI95=0.5,0.5;DP4=0,2,1,0;MQ=48;PV4=0.33,0.21,0,0.05 PL:DP:SP:GT:GQ 30,0,79:3:0:0/1:33 | |
| 15937 chr11 49805433 . T TGA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15938 chr11 49810786 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 15939 chr11 49830196 . C G 11.3 . DP=5;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,2;MQ=48;PV4=1,0.023,0.077,0.022 PL:DP:SP:GT:GQ 41,0,41:3:0:0/1:41 | |
| 15940 chr11 49860044 . A G 57.3 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=42 PL:DP:SP:GT:GQ 90,15,0:5:0:1/1:75 | |
| 15941 chr11 49884848 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15942 chr11 49920050 . C A 8.64 . DP=5;AF1=0.5;CI95=0.5,0.5;DP4=2,1,1,1;MQ=38;PV4=1,0.24,1,0.082 PL:DP:SP:GT:GQ 38,0,51:5:0:0/1:41 | |
| 15943 chr11 49920389 . G GAGAGC 3.25 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,1;MQ=37;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,62:4:0:0/1:41 | |
| 15944 chr11 49946220 . a aC 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 15945 chr11 49948772 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15946 chr11 49950657 . ca cAGa 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 15947 chr11 49974371 . G A 11.1 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=30 PL:DP:SP:GT:GQ 42,6,0:2:0:1/1:49 | |
| 15948 chr11 49974829 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15949 chr11 50043017 . G C 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15950 chr11 50087126 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15951 chr11 50087141 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15952 chr11 50089979 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15953 chr11 50091518 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15954 chr11 50095815 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15955 chr11 50129598 . G A 17.1 . DP=5;AF1=0.5;CI95=0.5,0.5;DP4=1,2,1,1;MQ=49;PV4=1,0.09,0.14,0.19 PL:DP:SP:GT:GQ 47,0,117:5:0:0/1:50 | |
| 15956 chr11 50129708 . G T 6.02 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 36,6,0:2:0:1/1:49 | |
| 15957 chr11 50146239 . C CAG 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 15958 chr11 50147183 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 15959 chr11 50169917 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 15960 chr11 50174658 . AC ACTTGTCC 12.7 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15961 chr11 50178621 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15962 chr11 50186547 . ca cATACTa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15963 chr11 50193275 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15964 chr11 50199063 . tg tGAGGGGg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15965 chr11 50210135 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 15966 chr11 50223338 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 15967 chr11 50228063 . T C 99 . DP=18;AF1=1;CI95=1,1;DP4=0,0,6,9;MQ=49 PL:DP:SP:GT:GQ 177,45,0:15:0:1/1:99 | |
| 15968 chr11 50228715 . aggcgggcg aggcg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15969 chr11 50285211 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15970 chr11 50289943 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15971 chr11 50294909 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15972 chr11 50304318 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15973 chr11 50324132 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15974 chr11 50343484 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15975 chr11 50356434 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 15976 chr11 50362978 . C G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 15977 chr11 50366026 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 15978 chr11 50377449 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15979 chr11 50385349 . a aAG 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 15980 chr11 50389232 . t tAAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15981 chr11 50406658 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 15982 chr11 50406668 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15983 chr11 50424792 . G C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 15984 chr11 50482352 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 15985 chr11 50484629 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 15986 chr11 50488733 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15987 chr11 50495093 . ctccttt ct 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15988 chr11 50513642 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 15989 chr11 50516653 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 15990 chr11 50518609 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15991 chr11 50534364 . tgt tGTGATACCCgt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15992 chr11 50534426 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 15993 chr11 50538752 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 15994 chr11 50545457 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 15995 chr11 50589277 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 15996 chr11 50610846 . tt tTCTGAAATGt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 15997 chr11 50615418 . a aGGAAGAGCAT 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 15998 chr11 50617102 . A C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 15999 chr11 50635416 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16000 chr11 50644818 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16001 chr11 50645254 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=46 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 16002 chr11 50669953 . T G 87 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,1;MQ=44 PL:DP:SP:GT:GQ 119,9,0:3:0:1/1:63 | |
| 16003 chr11 50669970 . G A 12.2 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,1;MQ=44 PL:DP:SP:GT:GQ 44,9,0:3:0:1/1:63 | |
| 16004 chr11 50671189 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 16005 chr11 50678196 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 16006 chr11 50687373 . A C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 16007 chr11 50687507 . C A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 16008 chr11 50692603 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 16009 chr11 50699414 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16010 chr11 50725577 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 16011 chr11 50727142 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 16012 chr11 50727450 . G C 5.47 . DP=2;AF1=0.5019;CI95=0.5,0.5;DP4=1,0,0,1;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,21:2:0:0/1:24 | |
| 16013 chr11 50730775 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16014 chr11 50765188 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16015 chr11 50765318 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 16016 chr11 50766274 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16017 chr11 50771027 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 16018 chr11 50771668 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16019 chr11 51105989 . C G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 16020 chr11 51108815 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 16021 chr11 51120794 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16022 chr11 51133965 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16023 chr11 51149424 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16024 chr11 51164547 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 16025 chr11 51178605 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 16026 chr11 51179534 . A C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 16027 chr11 51188787 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 16028 chr11 51203935 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 16029 chr11 51211377 . t tACAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16030 chr11 51213158 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 16031 chr11 51232103 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16032 chr11 51261939 . C G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 16033 chr11 51286318 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 16034 chr11 51325436 . t tCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16035 chr11 51328165 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 16036 chr11 51361445 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16037 chr11 51405300 . T G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 16038 chr11 51412017 . G T 3.02 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16039 chr11 51416177 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 16040 chr11 51417873 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16041 chr11 51426002 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 16042 chr11 51426491 . AGAATGAA AGAA 3.25 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=0,3,1,0;MQ=50;PV4=0.25,0.0051,1,0.059 PL:DP:SP:GT:GQ 38,0,114:4:0:0/1:41 | |
| 16043 chr11 51434899 . gg gGGGTAATGTg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16044 chr11 51438979 . A T 5.5 . DP=2;AF1=0.5063;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,16:2:0:0/1:19 | |
| 16045 chr11 51443072 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16046 chr11 51448037 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 16047 chr11 51472505 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16048 chr11 51475064 . a aCGTTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16049 chr11 51483304 . C T 3.01 . DP=4;AF1=0.4997;CI95=0.5,0.5;DP4=3,0,1,0;MQ=48;PV4=1,0.29,0,1 PL:DP:SP:GT:GQ 30,0,105:4:0:0/1:33 | |
| 16050 chr11 51483384 . A T 4.18 . DP=3;AF1=0.51;CI95=0.5,0.5;DP4=0,1,2,0;MQ=49;PV4=0.33,0.45,0.33,1 PL:DP:SP:GT:GQ 32,0,14:3:0:0/1:17 | |
| 16051 chr11 51483445 . GTGCT GTGCTGCT 5.08 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,1,1,0.13 PL:DP:SP:GT:GQ 41,0,83:3:0:0/1:44 | |
| 16052 chr11 51493309 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16053 chr11 51508901 . a aCAGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16054 chr11 51515436 . C A,G 16.6 . DP=12;AF1=0.5718;CI95=0.5,1;DP4=0,1,1,3;MQ=48;PV4=1,1,0.23,1 PL:DP:SP:GT:GQ 49,3,37,9,0,49:5:0:0/1:8 | |
| 16055 chr11 51515502 . TC TCCTAC 3.25 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=1,2,1,0;MQ=49;PV4=1,1,1,0.16 PL:DP:SP:GT:GQ 38,0,98:4:0:0/1:41 | |
| 16056 chr11 51567467 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 16057 chr11 51567495 . A T 7.59 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=46 PL:DP:SP:GT:GQ 38,6,0:2:0:1/1:49 | |
| 16058 chr11 51572128 . a aGC 3.25 . INDEL;DP=10;AF1=0.5;CI95=0.5,0.5;DP4=1,2,1,0;MQ=35;PV4=1,1,1,0.22 PL:DP:SP:GT:GQ 38,0,38:4:0:0/1:38 | |
| 16059 chr11 51573109 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 16060 chr11 51574782 . T C 50 . DP=16;AF1=1;CI95=1,1;DP4=0,1,7,8;MQ=11;PV4=1,0.023,1,0.15 PL:DP:SP:GT:GQ 83,36,0:16:0:1/1:99 | |
| 16061 chr11 51574956 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=46 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16062 chr11 51576890 . G C 19.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 51,6,0:2:0:1/1:49 | |
| 16063 chr11 51577294 . t tGTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16064 chr11 51579339 . C A 7.07 . DP=8;AF1=1;CI95=0.5,1;DP4=0,1,2,1;MQ=13;PV4=1,0.29,1,1 PL:DP:SP:GT:GQ 37,5,0:4:0:1/1:46 | |
| 16065 chr11 51579531 . A T 44 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,1,2;MQ=47 PL:DP:SP:GT:GQ 76,9,0:3:0:1/1:63 | |
| 16066 chr11 51579562 . G C 14.2 . DP=7;AF1=0.5001;CI95=0.5,0.5;DP4=1,0,1,3;MQ=31;PV4=0.4,0.025,0.053,1 PL:DP:SP:GT:GQ 44,0,35:5:0:0/1:37 | |
| 16067 chr11 51580630 . C T 4.21 . DP=5;AF1=0.5161;CI95=0.5,0.5;DP4=1,0,1,1;MQ=47;PV4=1,0.48,0.33,1 PL:DP:SP:GT:GQ 32,0,12:3:0:0/1:15 | |
| 16068 chr11 51580660 . T C 13 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=30 PL:DP:SP:GT:GQ 44,6,0:2:0:1/1:49 | |
| 16069 chr11 51591346 . T G 38 . DP=20;AF1=0.5;CI95=0.5,0.5;DP4=7,4,5,3;MQ=31;PV4=1,3.4e-07,1,1 PL:DP:SP:GT:GQ 68,0,93:19:0:0/1:71 | |
| 16070 chr11 54715123 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 16071 chr11 54729588 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16072 chr11 54793212 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16073 chr11 54821186 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 16074 chr11 54864160 . G C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 16075 chr11 54884930 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16076 chr11 54895555 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 16077 chr11 54921513 . gatt gATTCatt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16078 chr11 54924911 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16079 chr11 54963325 . G C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 16080 chr11 54974207 . ag aGTTg 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 16081 chr11 54977402 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16082 chr11 54990178 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 16083 chr11 54997446 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 16084 chr11 55001191 . C A 5.29 . DP=3;AF1=0.95;CI95=0.5,1;DP4=1,1,0,1;MQ=24;PV4=1,0.26,1,0.27 PL:DP:SP:GT:GQ 32,0,0:3:0:1/1:10 | |
| 16085 chr11 55012262 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 16086 chr11 55015317 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16087 chr11 55020299 . A C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 16088 chr11 55020444 . G T 5.52 . DP=2;AF1=0.5101;CI95=0.5,0.5;DP4=0,1,1,0;MQ=32;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,14:2:0:0/1:17 | |
| 16089 chr11 55021664 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16090 chr11 55053453 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16091 chr11 55086293 . C T 39 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,2,1;MQ=42 PL:DP:SP:GT:GQ 71,9,0:3:0:1/1:63 | |
| 16092 chr11 55100090 . ct cTGGt 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 16093 chr11 55170003 . TA TAGA 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 16094 chr11 55179056 . GA GAAA 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=49;PV4=1,1,1,0.24 PL:DP:SP:GT:GQ 41,0,53:3:0:0/1:44 | |
| 16095 chr11 55198310 . A G 44 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,1,2;MQ=43 PL:DP:SP:GT:GQ 76,9,0:3:0:1/1:63 | |
| 16096 chr11 55203692 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16097 chr11 55214766 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 16098 chr11 55218256 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 16099 chr11 55221396 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 16100 chr11 55238350 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16101 chr11 55245643 . T C 33 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,2,1;MQ=46 PL:DP:SP:GT:GQ 65,9,0:3:0:1/1:63 | |
| 16102 chr11 55245698 . G A 99 . DP=13;AF1=1;CI95=1,1;DP4=0,0,3,10;MQ=31 PL:DP:SP:GT:GQ 166,39,0:13:0:1/1:99 | |
| 16103 chr11 55249035 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 16104 chr11 55254968 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 16105 chr11 55258385 . G C 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16106 chr11 55258390 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16107 chr11 55276813 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16108 chr11 55302380 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 16109 chr11 55313027 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 16110 chr11 55326991 . G A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 16111 chr11 55366199 . T A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 16112 chr11 55370875 . A G 3.56 . DP=5;AF1=0.503;CI95=0.5,0.5;DP4=1,0,2,0;MQ=47;PV4=1,0.042,0.2,0.27 PL:DP:SP:GT:GQ 31,0,19:3:0:0/1:22 | |
| 16113 chr11 55371275 . A G 88 . DP=38;AF1=0.5;CI95=0.5,0.5;DP4=3,13,1,16;MQ=49;PV4=0.34,3.4e-13,0.034,1 PL:DP:SP:GT:GQ 118,0,255:33:5:0/1:99 | |
| 16114 chr11 55403540 . T G 6.98 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 16115 chr11 55406031 . C G 62 . DP=41;AF1=0.5;CI95=0.5,0.5;DP4=8,17,6,7;MQ=49;PV4=0.49,3e-10,0.0023,1 PL:DP:SP:GT:GQ 92,0,255:38:3:0/1:95 | |
| 16116 chr11 55407085 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 16117 chr11 55418620 . G A 66 . DP=58;AF1=0.5;CI95=0.5,0.5;DP4=18,21,10,5;MQ=49;PV4=0.23,6.5e-14,2.9e-05,1 PL:DP:SP:GT:GQ 96,0,255:54:6:0/1:99 | |
| 16118 chr11 55419017 . T A 6.2 . DP=28;AF1=0.4999;CI95=0.5,0.5;DP4=4,9,0,5;MQ=49;PV4=0.28,3.3e-08,0.017,1 PL:DP:SP:GT:GQ 35,0,255:18:6:0/1:38 | |
| 16119 chr11 55419349 . A C 23 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,5;MQ=48;PV4=1,0.21,0.062,0.34 PL:DP:SP:GT:GQ 53,0,57:9:0:0/1:55 | |
| 16120 chr11 55432719 . C G 66 . DP=27;AF1=0.5;CI95=0.5,0.5;DP4=6,2,0,8;MQ=46;PV4=0.007,0.071,0.0016,1 PL:DP:SP:GT:GQ 96,0,154:16:22:0/1:99 | |
| 16121 chr11 55432930 . C G 99 . DP=40;AF1=0.5;CI95=0.5,0.5;DP4=5,5,9,13;MQ=49;PV4=0.71,6.2e-10,0.0051,1 PL:DP:SP:GT:GQ 200,0,255:32:1:0/1:99 | |
| 16122 chr11 55433102 . G A 94 . DP=64;AF1=0.5;CI95=0.5,0.5;DP4=19,21,14,6;MQ=49;PV4=0.17,1.5e-13,0.0005,1 PL:DP:SP:GT:GQ 124,0,255:60:8:0/1:99 | |
| 16123 chr11 55444946 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 16124 chr11 55463252 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16125 chr11 55476528 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16126 chr11 55482401 . G T 20.1 . DP=5;AF1=0.5013;CI95=0.5,0.5;DP4=1,0,3,0;MQ=48;PV4=1,0.047,0.13,1 PL:DP:SP:GT:GQ 50,0,23:4:0:0/1:26 | |
| 16127 chr11 55490385 . T G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 16128 chr11 55526919 . atag aTAGAGATtag 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16129 chr11 55541098 . G A 99 . DP=37;AF1=1;CI95=1,1;DP4=1,0,15,15;MQ=47;PV4=1,0.27,0.14,1 PL:DP:SP:GT:GQ 255,62,0:31:0:1/1:99 | |
| 16130 chr11 55555711 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16131 chr11 55557020 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16132 chr11 55568314 . C G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 16133 chr11 55579291 . G A 20 . DP=10;AF1=0.5;CI95=0.5,0.5;DP4=1,4,0,4;MQ=46;PV4=1,0.16,1,1 PL:DP:SP:GT:GQ 50,0,103:9:0:0/1:53 | |
| 16134 chr11 55587117 . T A 99 . DP=23;AF1=1;CI95=1,1;DP4=0,0,15,6;MQ=45 PL:DP:SP:GT:GQ 255,63,0:21:0:1/1:99 | |
| 16135 chr11 55587511 . A G 12.6 . DP=33;AF1=0.543;CI95=0.5,1;DP4=0,1,2,1;MQ=49;PV4=1,0.41,0.21,1 PL:DP:SP:GT:GQ 42,0,8:4:0:0/1:11 | |
| 16136 chr11 55595149 . G A 27 . DP=42;AF1=0.5;CI95=0.5,0.5;DP4=5,12,9,0;MQ=49;PV4=0.00071,1.3e-05,5.7e-07,1 PL:DP:SP:GT:GQ 57,0,255:26:31:0/1:60 | |
| 16137 chr11 55606302 . G T 5.48 . DP=20;AF1=0.5039;CI95=0.5,0.5;DP4=1,0,1,2;MQ=50;PV4=1,0.054,0.33,1 PL:DP:SP:GT:GQ 34,0,18:4:0:0/1:21 | |
| 16138 chr11 55606693 . G A 97 . DP=38;AF1=0.5;CI95=0.5,0.5;DP4=4,8,4,15;MQ=49;PV4=0.68,1.1e-19,0.068,0.14 PL:DP:SP:GT:GQ 127,0,255:31:2:0/1:99 | |
| 16139 chr11 55606818 . C T 45 . DP=42;AF1=0.5;CI95=0.5,0.5;DP4=17,4,7,4;MQ=49;PV4=0.4,9.3e-08,0.0016,0.5 PL:DP:SP:GT:GQ 75,0,255:32:4:0/1:78 | |
| 16140 chr11 55614260 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16141 chr11 55637060 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 16142 chr11 55649158 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 16143 chr11 55655619 . G A 3.6 . DP=5;AF1=0.5127;CI95=0.5,0.5;DP4=1,0,2,0;MQ=47;PV4=1,0.48,0.33,1 PL:DP:SP:GT:GQ 31,0,13:3:0:0/1:16 | |
| 16144 chr11 55671952 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16145 chr11 55681336 . G A 99 . DP=40;AF1=0.5;CI95=0.5,0.5;DP4=9,11,5,13;MQ=49;PV4=0.33,2e-12,0.00094,1 PL:DP:SP:GT:GQ 158,0,255:38:5:0/1:99 | |
| 16146 chr11 55681494 . G A 49.2 . DP=27;AF1=0.7303;CI95=0.5,1;DP4=1,0,6,1;MQ=49;PV4=1,0.2,0.28,1 PL:DP:SP:GT:GQ 78,0,2:8:0:0/1:3 | |
| 16147 chr11 55681566 . G A 4.77 . DP=42;AF1=0.4999;CI95=0.5,0.5;DP4=7,13,4,1;MQ=49;PV4=0.13,2.8e-12,1.3e-06,0.24 PL:DP:SP:GT:GQ 33,0,255:25:9:0/1:36 | |
| 16148 chr11 55703098 . AT A 55.5 . INDEL;DP=13;AF1=0.5;CI95=0.5,0.5;DP4=1,3,1,4;MQ=50;PV4=1,4.1e-05,1,0.11 PL:DP:SP:GT:GQ 93,0,112:9:0:0/1:96 | |
| 16149 chr11 55703339 . A C 15.1 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=1,1,3,0;MQ=49;PV4=0.4,0.022,0.11,1 PL:DP:SP:GT:GQ 45,0,47:5:0:0/1:46 | |
| 16150 chr11 55724257 . aa aAGAGCa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16151 chr11 55727728 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 16152 chr11 55741193 . CA CAGCCTGTA 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=49 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 16153 chr11 55744015 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 16154 chr11 55763761 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16155 chr11 55779996 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16156 chr11 55782814 . T G 3.02 . DP=9;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16157 chr11 55788973 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 16158 chr11 55798152 . G A 56.5 . DP=19;AF1=0.9998;CI95=0.5,1;DP4=0,1,2,4;MQ=49;PV4=1,1,0.3,1 PL:DP:SP:GT:GQ 86,2,0:7:0:1/1:37 | |
| 16159 chr11 55808156 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 16160 chr11 55839231 . G GT 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 16161 chr11 55860780 . G A 48.3 . DP=10;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=46 PL:DP:SP:GT:GQ 81,15,0:5:0:1/1:75 | |
| 16162 chr11 55873024 . A G 92.8 . DP=11;AF1=0.6243;CI95=0.5,1;DP4=1,0,2,4;MQ=45;PV4=0.43,1,0.16,1 PL:DP:SP:GT:GQ 122,0,4:7:0:0/1:6 | |
| 16163 chr11 55875495 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16164 chr11 55876757 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 16165 chr11 55886812 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16166 chr11 55887010 . A C 10.4 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 16167 chr11 55890757 . AGTC A 7.35 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 16168 chr11 55910829 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16169 chr11 55932996 . A G 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 16170 chr11 55944048 . G C 18.1 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=4,0,4,0;MQ=50;PV4=1,0.00024,0.18,1 PL:DP:SP:GT:GQ 48,0,129:8:0:0/1:51 | |
| 16171 chr11 55944162 . A G 17.1 . DP=27;AF1=0.5;CI95=0.5,0.5;DP4=2,6,3,1;MQ=48;PV4=0.22,0.098,0.21,0.2 PL:DP:SP:GT:GQ 47,0,171:12:7:0/1:50 | |
| 16172 chr11 55977967 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 16173 chr11 55978956 . G A 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,42:2:0:0/1:35 | |
| 16174 chr11 55982747 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16175 chr11 56000403 . C G 99 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=10,4,6,3;MQ=48;PV4=1,0.00025,1.3e-08,1 PL:DP:SP:GT:GQ 152,0,255:23:0:0/1:99 | |
| 16176 chr11 56025834 . C G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 16177 chr11 56027950 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16178 chr11 56028475 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 16179 chr11 56033017 . TG TGCAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16180 chr11 56059375 . TG TGGTTGCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16181 chr11 56064685 . A T 3.54 . DP=29;AF1=0.4998;CI95=0.5,0.5;DP4=6,7,0,6;MQ=49;PV4=0.11,0.0087,0.15,0.47 PL:DP:SP:GT:GQ 31,0,255:19:10:0/1:34 | |
| 16182 chr11 56065202 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16183 chr11 56084611 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 16184 chr11 56086147 . T G 99 . DP=33;AF1=0.5;CI95=0.5,0.5;DP4=7,7,10,7;MQ=49;PV4=0.72,8.1e-11,0.086,1 PL:DP:SP:GT:GQ 134,0,255:31:1:0/1:99 | |
| 16185 chr11 56113516 . T C 95 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=5,1,5,0;MQ=47;PV4=1,0.057,3.7e-09,0.26 PL:DP:SP:GT:GQ 125,0,191:11:0:0/1:99 | |
| 16186 chr11 56118697 . ta tACa 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 16187 chr11 56121700 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 16188 chr11 56128524 . C T 73.8 . DP=34;AF1=1;CI95=0.5,1;DP4=1,0,3,5;MQ=49;PV4=0.44,1,0.27,1 PL:DP:SP:GT:GQ 106,10,0:9:0:1/1:60 | |
| 16189 chr11 56130516 . G A 6.02 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 36,6,0:2:0:1/1:49 | |
| 16190 chr11 56141325 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16191 chr11 56143570 . A G 74 . DP=56;AF1=0.5;CI95=0.5,0.5;DP4=13,22,13,4;MQ=49;PV4=0.017,1.3e-16,0.00058,1 PL:DP:SP:GT:GQ 104,0,255:52:18:0/1:99 | |
| 16192 chr11 56143966 . C T 27.1 . DP=6;AF1=0.5129;CI95=0.5,0.5;DP4=0,1,0,4;MQ=49;PV4=1,0.025,0.026,1 PL:DP:SP:GT:GQ 57,0,13:5:0:0/1:16 | |
| 16193 chr11 56159234 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 16194 chr11 56208983 . acaccacc acacc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16195 chr11 56216872 . A AACT 5.09 . INDEL;DP=4;AF1=0.5025;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,20:3:0:0/1:23 | |
| 16196 chr11 56217104 . CTT CTTTT 5.08 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,1,1,0.15 PL:DP:SP:GT:GQ 41,0,63:3:0:0/1:44 | |
| 16197 chr11 56237577 . T A 6.98 . DP=17;AF1=0.4999;CI95=0.5,0.5;DP4=2,2,0,3;MQ=49;PV4=0.43,0.12,1,1 PL:DP:SP:GT:GQ 36,0,83:7:4:0/1:39 | |
| 16198 chr11 56237961 . T C 3.54 . DP=4;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 16199 chr11 56248299 . A ACG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16200 chr11 56287791 . gatcca ga 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16201 chr11 56289213 . T G 8.64 . DP=3;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,2;MQ=48;PV4=0.33,0.028,0.077,1 PL:DP:SP:GT:GQ 38,0,41:3:0:0/1:39 | |
| 16202 chr11 56315029 . T A 5.46 . DP=2;AF1=0.5005;CI95=0.5,0.5;DP4=0,1,0,1;MQ=37;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,26:2:0:0/1:28 | |
| 16203 chr11 56315442 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 16204 chr11 56336717 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 16205 chr11 56350367 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 16206 chr11 56388118 . A AGGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16207 chr11 56398026 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 16208 chr11 56409603 . C T 99 . DP=30;AF1=0.5;CI95=0.5,0.5;DP4=6,4,5,11;MQ=46;PV4=0.23,0.3,7.9e-32,1 PL:DP:SP:GT:GQ 255,0,236:26:6:0/1:99 | |
| 16209 chr11 56413679 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16210 chr11 56419272 . A T 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16211 chr11 56458080 . T A 3.54 . DP=5;AF1=0.4998;CI95=0.5,0.5;DP4=3,0,1,0;MQ=48;PV4=1,1,0,0.26 PL:DP:SP:GT:GQ 31,0,90:4:0:0/1:34 | |
| 16212 chr11 56468048 . C T 19.8 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 51,6,0:2:0:1/1:49 | |
| 16213 chr11 56468403 . G A 99 . DP=33;AF1=0.5;CI95=0.5,0.5;DP4=6,15,2,8;MQ=48;PV4=1,0.0025,2.7e-17,1 PL:DP:SP:GT:GQ 205,0,255:31:0:0/1:99 | |
| 16214 chr11 56468493 . A G 70 . DP=54;AF1=0.5;CI95=0.5,0.5;DP4=8,6,1,10;MQ=49;PV4=0.033,1.9e-08,1.5e-05,0.017 PL:DP:SP:GT:GQ 100,0,255:25:15:0/1:99 | |
| 16215 chr11 56468637 . C T 92 . DP=44;AF1=0.5;CI95=0.5,0.5;DP4=6,16,0,14;MQ=49;PV4=0.062,0.033,1.6e-05,0.11 PL:DP:SP:GT:GQ 122,0,255:36:12:0/1:99 | |
| 16216 chr11 56470217 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 16217 chr11 56470768 . TA TAA 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 16218 chr11 56473194 . G A 12.3 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 16219 chr11 56482577 . TTC TTCAGAGATC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16220 chr11 56488257 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16221 chr11 56503873 . C T 6.2 . DP=5;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,1;MQ=49;PV4=1,0.017,0.17,1 PL:DP:SP:GT:GQ 35,0,41:3:0:0/1:37 | |
| 16222 chr11 56507812 . A G 30 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=3,6,2,2;MQ=41;PV4=1,0.014,1,1 PL:DP:SP:GT:GQ 60,0,221:13:0:0/1:63 | |
| 16223 chr11 56507816 . A C 18.1 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=5,1,1,4;MQ=45;PV4=0.08,0.00014,0.0056,1 PL:DP:SP:GT:GQ 48,0,180:11:11:0/1:51 | |
| 16224 chr11 56507838 . A G 99 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=7,2,3,5;MQ=44;PV4=0.15,0.039,0.003,1 PL:DP:SP:GT:GQ 185,0,237:17:8:0/1:99 | |
| 16225 chr11 56507852 . A G 46 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=5,0,1,4;MQ=43;PV4=0.048,0.15,0.0011,0.12 PL:DP:SP:GT:GQ 76,0,132:10:13:0/1:79 | |
| 16226 chr11 56508013 . A G 18.1 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=0,7,3,2;MQ=41;PV4=0.045,0.18,8.2e-05,1 PL:DP:SP:GT:GQ 48,0,111:12:13:0/1:51 | |
| 16227 chr11 56508220 . TGAGAG TGAGAGAGAG 85.4 . INDEL;DP=4;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=50 PL:DP:SP:GT:GQ 125,9,0:3:0:1/1:63 | |
| 16228 chr11 56510672 . T C 9.31 . DP=16;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=48 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 16229 chr11 56543349 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16230 chr11 56564872 . C G 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16231 chr11 56570077 . TGGCAG TG 10.8 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 16232 chr11 56574766 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16233 chr11 56579851 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 16234 chr11 56589133 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16235 chr11 56611715 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16236 chr11 56621632 . A G 5.46 . DP=3;AF1=0.4999;CI95=0.5,0.5;DP4=1,1,1,0;MQ=48;PV4=1,0.38,0,1 PL:DP:SP:GT:GQ 34,0,80:3:0:0/1:37 | |
| 16237 chr11 56624854 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 16238 chr11 56627147 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16239 chr11 56654796 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 16240 chr11 56659300 . G GTA 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 16241 chr11 56662183 . at aTCt 4.42 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 16242 chr11 56675367 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16243 chr11 56684252 . TG TGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16244 chr11 56705793 . TG TGCGCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16245 chr11 56734377 . C T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 16246 chr11 56736917 . G A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 16247 chr11 56738326 . T TGGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16248 chr11 56756664 . G A 99 . DP=10;AF1=1;CI95=1,1;DP4=0,0,5,5;MQ=47 PL:DP:SP:GT:GQ 197,30,0:10:0:1/1:99 | |
| 16249 chr11 56764238 . a aTGAGAGATAGG 7.35 . INDEL;DP=2;AF1=0.5006;CI95=0.5,0.5;DP4=0,1,1,0;MQ=42;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,26:2:0:0/1:29 | |
| 16250 chr11 56768469 . gta gTACta 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16251 chr11 56785984 . T A 31 . DP=7;AF1=0.5;CI95=0.5,0.5;DP4=3,1,1,1;MQ=46;PV4=1,1,0.1,1 PL:DP:SP:GT:GQ 61,0,93:6:0:0/1:64 | |
| 16252 chr11 56795890 . c cGCGTAGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16253 chr11 56812650 . T TCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16254 chr11 56842482 . A ATG 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 16255 chr11 56858827 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 16256 chr11 56863817 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16257 chr11 56866346 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16258 chr11 56870670 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 16259 chr11 56902250 . g gAGCTTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16260 chr11 56905521 . C G 6.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 16261 chr11 56917648 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16262 chr11 56919104 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 16263 chr11 56928136 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 16264 chr11 56931487 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 16265 chr11 56950175 . C T 6.2 . DP=6;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,2;MQ=46;PV4=1,0.0037,0.19,1 PL:DP:SP:GT:GQ 35,0,40:4:0:0/1:37 | |
| 16266 chr11 56950264 . A G 22.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47 PL:DP:SP:GT:GQ 54,6,0:2:0:1/1:49 | |
| 16267 chr11 56951869 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 16268 chr11 56991514 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 16269 chr11 56996749 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 16270 chr11 56999455 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16271 chr11 57002930 . G T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 16272 chr11 57007003 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 16273 chr11 57016705 . G C 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16274 chr11 57069226 . A C 10.4 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=5,0,3,0;MQ=49;PV4=1,0.41,0.073,0.18 PL:DP:SP:GT:GQ 40,0,78:8:0:0/1:43 | |
| 16275 chr11 57083657 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 16276 chr11 57084465 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 16277 chr11 57087459 . A C 4.77 . DP=5;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 16278 chr11 57091376 . G GGCGAGCCGCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16279 chr11 57102096 . A G 40 . DP=28;AF1=0.5;CI95=0.5,0.5;DP4=2,6,2,4;MQ=49;PV4=1,0.0029,0.04,1 PL:DP:SP:GT:GQ 70,0,196:14:0:0/1:73 | |
| 16280 chr11 57102678 . C A 3.6 . DP=6;AF1=0.5127;CI95=0.5,0.5;DP4=0,1,0,2;MQ=48;PV4=1,0.33,0.27,0.26 PL:DP:SP:GT:GQ 31,0,13:3:0:0/1:16 | |
| 16281 chr11 57116810 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 16282 chr11 57118385 . C T 23 . DP=33;AF1=0.5;CI95=0.5,0.5;DP4=0,10,4,2;MQ=49;PV4=0.0082,0.47,0.00019,1 PL:DP:SP:GT:GQ 53,0,89:16:21:0/1:56 | |
| 16283 chr11 57122138 . c cTTTGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16284 chr11 57137296 . G A 7.59 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 38,6,0:2:0:1/1:49 | |
| 16285 chr11 57137538 . AGGGG AGGGGG 73.6 . INDEL;DP=6;AF1=1;CI95=0.5,1;DP4=0,0,1,5;MQ=50 PL:DP:SP:GT:GQ 114,18,0:6:0:1/1:90 | |
| 16286 chr11 57147016 . A G 99 . DP=39;AF1=1;CI95=1,1;DP4=0,0,4,7;MQ=48 PL:DP:SP:GT:GQ 150,33,0:11:0:1/1:99 | |
| 16287 chr11 57147353 . G C 14.1 . DP=11;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=49 PL:DP:SP:GT:GQ 46,9,0:3:0:1/1:63 | |
| 16288 chr11 57148175 . A G,T 99 . DP=13;AF1=1;CI95=1,1;DP4=0,0,1,9;MQ=46 PL:DP:SP:GT:GQ 160,27,153,0,10,153:10:0:1/1:99 | |
| 16289 chr11 57155288 . T C 30.8 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=43 PL:DP:SP:GT:GQ 62,6,0:2:0:1/1:49 | |
| 16290 chr11 57156438 . A G 58 . DP=23;AF1=0.5;CI95=0.5,0.5;DP4=9,1,13,0;MQ=49;PV4=0.43,1.2e-05,0.072,1 PL:DP:SP:GT:GQ 88,0,205:23:0:0/1:91 | |
| 16291 chr11 57182903 . A T 3.02 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16292 chr11 57184218 . C T 94.1 . DP=7;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=45 PL:DP:SP:GT:GQ 127,21,0:7:0:1/1:84 | |
| 16293 chr11 57186949 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 16294 chr11 57202390 . T A 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 16295 chr11 57219409 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 16296 chr11 57224762 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16297 chr11 57232595 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 16298 chr11 57234191 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 16299 chr11 57234425 . t tCTTC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 16300 chr11 57239872 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16301 chr11 57243588 . A G 99 . DP=19;AF1=1;CI95=1,1;DP4=0,0,17,0;MQ=43 PL:DP:SP:GT:GQ 228,51,0:17:0:1/1:99 | |
| 16302 chr11 57246020 . T G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 16303 chr11 57250028 . C CCCTCCTGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16304 chr11 57251036 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 16305 chr11 57264674 . CTCAGTCA CTCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16306 chr11 57264822 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16307 chr11 57266322 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16308 chr11 57269285 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 16309 chr11 57293862 . G A 3.01 . DP=3;AF1=0.4997;CI95=0.5,0.5;DP4=2,0,0,1;MQ=47;PV4=0.33,0.33,0,1 PL:DP:SP:GT:GQ 30,0,80:3:0:0/1:33 | |
| 16310 chr11 57295372 . CA CATA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16311 chr11 57297651 . G A 10.4 . DP=45;AF1=0.5;CI95=0.5,0.5;DP4=1,12,5,2;MQ=49;PV4=0.0072,2.1e-07,0.0064,1 PL:DP:SP:GT:GQ 40,0,252:20:21:0/1:43 | |
| 16312 chr11 57302568 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 16313 chr11 57304576 . CC CCCGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16314 chr11 57305953 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 16315 chr11 57309140 . GGttcc GGTTCCGttcc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16316 chr11 57310445 . G C 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16317 chr11 57314877 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 16318 chr11 57346952 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16319 chr11 57354374 . gaaca gAACaaca 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16320 chr11 57369706 . C T 9.52 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=0,6,0,5;MQ=48;PV4=1,2.1e-05,0.016,1 PL:DP:SP:GT:GQ 39,0,165:11:0:0/1:42 | |
| 16321 chr11 57369715 . G A 3.02 . DP=9;AF1=0.5007;CI95=0.5,0.5;DP4=0,2,0,2;MQ=46;PV4=1,1,1,0.47 PL:DP:SP:GT:GQ 30,0,24:4:0:0/1:26 | |
| 16322 chr11 57369716 . G A 4.16 . DP=9;AF1=0.5062;CI95=0.5,0.5;DP4=0,1,0,2;MQ=45;PV4=1,0.17,0.42,1 PL:DP:SP:GT:GQ 32,0,16:3:0:0/1:19 | |
| 16323 chr11 57371339 . C A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 16324 chr11 57372352 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 16325 chr11 57388955 . C CCGCGGCGT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 16326 chr11 57398933 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16327 chr11 57413943 . C G 29 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,7;MQ=49;PV4=1,3.4e-05,0.16,0.49 PL:DP:SP:GT:GQ 59,0,113:11:0:0/1:62 | |
| 16328 chr11 57414083 . GATT G 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16329 chr11 57426851 . A G 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 16330 chr11 57434275 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 16331 chr11 57447147 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 16332 chr11 57449584 . GA GAGAA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 16333 chr11 57480285 . C A 4.77 . DP=27;AF1=0.4999;CI95=0.5,0.5;DP4=4,6,0,5;MQ=49;PV4=0.23,0.014,0.0018,0.27 PL:DP:SP:GT:GQ 33,0,254:15:6:0/1:36 | |
| 16334 chr11 57485377 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 16335 chr11 57488391 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 16336 chr11 57528785 . C CGGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16337 chr11 57538210 . T C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 16338 chr11 57561648 . AC ACCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16339 chr11 57587102 . AA AAGAGATCAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16340 chr11 57588376 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 16341 chr11 57594977 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16342 chr11 57605542 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16343 chr11 57613539 . ct cTGt 5.08 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,42:2:0:0/1:41 | |
| 16344 chr11 57648515 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16345 chr11 57651560 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16346 chr11 57652801 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16347 chr11 57665748 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 16348 chr11 57678549 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16349 chr11 57692648 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 16350 chr11 57701705 . ACAGC A 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 16351 chr11 57705206 . CATTT C 9.94 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 16352 chr11 57716560 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 16353 chr11 57723415 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16354 chr11 57742197 . G C 12.3 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 16355 chr11 57743477 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 16356 chr11 57772151 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16357 chr11 57781068 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16358 chr11 57785267 . ta tAAACCGa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16359 chr11 57789399 . T TGAGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16360 chr11 57798942 . A G 4.77 . DP=46;AF1=0.4999;CI95=0.5,0.5;DP4=21,8,6,2;MQ=50;PV4=1,1.7e-05,0.0027,0.25 PL:DP:SP:GT:GQ 33,0,255:37:0:0/1:36 | |
| 16361 chr11 57801268 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 16362 chr11 57809040 . C T 10.4 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 16363 chr11 57811199 . TG TGTAGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16364 chr11 57818117 . G A 37.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=43 PL:DP:SP:GT:GQ 69,6,0:2:0:1/1:49 | |
| 16365 chr11 57818149 . G C 28.8 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=39 PL:DP:SP:GT:GQ 60,6,0:2:0:1/1:49 | |
| 16366 chr11 57818165 . T A 6.02 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=44 PL:DP:SP:GT:GQ 36,6,0:2:0:1/1:49 | |
| 16367 chr11 57825735 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16368 chr11 57836248 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16369 chr11 57840167 . T TGA 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,1,1,0.24 PL:DP:SP:GT:GQ 41,0,82:3:0:0/1:44 | |
| 16370 chr11 57894875 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 16371 chr11 57901737 . T G 7.8 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 16372 chr11 57944186 . TG TGCCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16373 chr11 57945567 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16374 chr11 57950860 . G A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 16375 chr11 57958208 . G C 71 . DP=29;AF1=0.5;CI95=0.5,0.5;DP4=2,6,11,0;MQ=47;PV4=0.001,0.044,0.0085,1 PL:DP:SP:GT:GQ 101,0,141:19:30:0/1:99 | |
| 16376 chr11 57958212 . G C 3.54 . DP=27;AF1=0.4998;CI95=0.5,0.5;DP4=7,7,4,0;MQ=47;PV4=0.12,0.067,0.00036,0.43 PL:DP:SP:GT:GQ 31,0,255:18:9:0/1:34 | |
| 16377 chr11 57958796 . C T 99 . DP=43;AF1=0.5;CI95=0.5,0.5;DP4=8,14,6,10;MQ=49;PV4=1,9.9e-13,0.001,1 PL:DP:SP:GT:GQ 138,0,255:38:0:0/1:99 | |
| 16378 chr11 57982229 . A G 18.1 . DP=9;AF1=0.5004;CI95=0.5,0.5;DP4=0,1,2,1;MQ=49;PV4=1,0.097,0.33,1 PL:DP:SP:GT:GQ 48,0,28:4:0:0/1:31 | |
| 16379 chr11 57982620 . A G 99 . DP=26;AF1=0.5;CI95=0.5,0.5;DP4=4,6,4,10;MQ=47;PV4=0.67,9.8e-06,0.0097,1 PL:DP:SP:GT:GQ 144,0,252:24:2:0/1:99 | |
| 16380 chr11 57983194 . A G 9.52 . DP=7;AF1=0.5;CI95=0.5,0.5;DP4=0,3,1,1;MQ=49;PV4=0.4,0.47,0.0013,1 PL:DP:SP:GT:GQ 39,0,61:5:0:0/1:42 | |
| 16381 chr11 57985791 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 16382 chr11 57995317 . TACA TACAACA 7.35 . INDEL;DP=7;AF1=0.5008;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,25:2:0:0/1:28 | |
| 16383 chr11 57995323 . T A,C 11.3 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=48 PL:DP:SP:GT:GQ 50,16,40,7,0,40:4:0:1/1:63 | |
| 16384 chr11 57995688 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 16385 chr11 57996084 . G A 53 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=2,3,5,1;MQ=48;PV4=0.24,0.21,0.029,1 PL:DP:SP:GT:GQ 83,0,106:11:6:0/1:86 | |
| 16386 chr11 58023249 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16387 chr11 58059530 . T C 7.8 . DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,2,1,1;MQ=40;PV4=1,0.11,0.078,1 PL:DP:SP:GT:GQ 37,0,69:4:0:0/1:40 | |
| 16388 chr11 58096691 . C G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 16389 chr11 58101886 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 16390 chr11 58102576 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16391 chr11 58116577 . G GCGA 5.08 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,2,1,0;MQ=50;PV4=0.33,1,1,0.19 PL:DP:SP:GT:GQ 41,0,83:3:0:0/1:44 | |
| 16392 chr11 58125620 . T C 54 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=9,0,5,0;MQ=48;PV4=1,0.0001,0.0062,1 PL:DP:SP:GT:GQ 84,0,207:14:0:0/1:87 | |
| 16393 chr11 58125774 . A G 80 . DP=36;AF1=0.5;CI95=0.5,0.5;DP4=7,9,3,13;MQ=49;PV4=0.25,2.4e-21,0.42,1 PL:DP:SP:GT:GQ 110,0,255:32:6:0/1:99 | |
| 16394 chr11 58133738 . A T 16.1 . DP=11;AF1=0.5;CI95=0.5,0.5;DP4=1,3,0,3;MQ=48;PV4=1,0.056,0.047,0.04 PL:DP:SP:GT:GQ 46,0,128:7:0:0/1:49 | |
| 16395 chr11 58134113 . C A 18.1 . DP=10;AF1=0.5032;CI95=0.5,0.5;DP4=0,2,0,4;MQ=49;PV4=1,1,0.2,1 PL:DP:SP:GT:GQ 48,0,19:6:0:0/1:22 | |
| 16396 chr11 58154651 . TT TTGTCTGTAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16397 chr11 58155086 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 16398 chr11 58155151 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16399 chr11 58165619 . T G 5.46 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 16400 chr11 58170291 . T C 38 . DP=34;AF1=0.5;CI95=0.5,0.5;DP4=13,8,2,5;MQ=49;PV4=0.2,6.7e-10,0.0051,0.24 PL:DP:SP:GT:GQ 68,0,255:28:7:0/1:71 | |
| 16401 chr11 58174628 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16402 chr11 58190136 . A G 99 . DP=18;AF1=1;CI95=1,1;DP4=0,0,8,6;MQ=48 PL:DP:SP:GT:GQ 189,42,0:14:0:1/1:99 | |
| 16403 chr11 58204198 . G C 8.65 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 16404 chr11 58207204 . A G 15.9 . DP=22;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=43 PL:DP:SP:GT:GQ 47,6,0:2:0:1/1:49 | |
| 16405 chr11 58209846 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 16406 chr11 58239295 . c cGTGAACCACAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16407 chr11 58246588 . TGATAGATA TGATA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16408 chr11 58250001 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16409 chr11 58266534 . G GCCCCTTGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16410 chr11 58291275 . G A 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16411 chr11 58303141 . A C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 16412 chr11 58319395 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16413 chr11 58323565 . A ACGGCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16414 chr11 58325772 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16415 chr11 58339065 . G GCC 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 16416 chr11 58343662 . TT TTACTCTCAGT 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16417 chr11 58345549 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16418 chr11 58353969 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16419 chr11 58355706 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16420 chr11 58364341 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16421 chr11 58367427 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 16422 chr11 58373529 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16423 chr11 58377558 . A G 47 . DP=13;AF1=0.5;CI95=0.5,0.5;DP4=0,5,0,5;MQ=48;PV4=1,0.059,0.089,1 PL:DP:SP:GT:GQ 77,0,119:10:0:0/1:80 | |
| 16424 chr11 58377734 . CACTA CACTACTA 7.35 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 16425 chr11 58377749 . G A 5.46 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 16426 chr11 58378642 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16427 chr11 58379663 . CGTGTGTGTGTGTGTGTGT CGTGTGTGTGTGTGTGT 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 16428 chr11 58381686 . A G 65 . DP=13;AF1=1;CI95=1,1;DP4=0,0,10,0;MQ=49 PL:DP:SP:GT:GQ 98,30,0:10:0:1/1:99 | |
| 16429 chr11 58395833 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16430 chr11 58395914 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 16431 chr11 58396856 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16432 chr11 58407621 . A C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 16433 chr11 58409970 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 16434 chr11 58411068 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 16435 chr11 58447635 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 16436 chr11 58469280 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 16437 chr11 58472263 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16438 chr11 58477175 . A G 61 . DP=29;AF1=0.5;CI95=0.5,0.5;DP4=11,0,17,0;MQ=49;PV4=1,3.6e-12,0.041,0.19 PL:DP:SP:GT:GQ 91,0,202:28:0:0/1:94 | |
| 16439 chr11 58477618 . G C 8.64 . DP=33;AF1=0.5;CI95=0.5,0.5;DP4=4,8,0,6;MQ=49;PV4=0.25,0.2,0.039,1 PL:DP:SP:GT:GQ 38,0,154:18:6:0/1:41 | |
| 16440 chr11 58478039 . T C 17.1 . DP=32;AF1=0.5;CI95=0.5,0.5;DP4=18,0,11,0;MQ=50;PV4=1,7.8e-22,1,1 PL:DP:SP:GT:GQ 47,0,243:29:0:0/1:50 | |
| 16441 chr11 58478084 . T C,G 50.4 . DP=40;AF1=0.5554;CI95=0.5,1;DP4=1,0,2,5;MQ=48;PV4=0.37,0.28,0.12,1 PL:DP:SP:GT:GQ 91,11,70,18,0,89:8:0:0/1:10 | |
| 16442 chr11 58504276 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 16443 chr11 58506926 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 16444 chr11 58508200 . G T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 16445 chr11 58514075 . t tAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16446 chr11 58524932 . gt gTCt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16447 chr11 58535741 . C CTACAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16448 chr11 58574008 . G GTTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16449 chr11 58578709 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16450 chr11 58601869 . AT ATCT 3.25 . INDEL;DP=6;AF1=0.5;CI95=0.5,0.5;DP4=3,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,107:4:0:0/1:41 | |
| 16451 chr11 58604712 . T C 99 . DP=44;AF1=0.5;CI95=0.5,0.5;DP4=16,13,5,4;MQ=49;PV4=1,0.025,1.8e-13,1 PL:DP:SP:GT:GQ 142,0,255:38:0:0/1:99 | |
| 16452 chr11 58605829 . T C 6.98 . DP=8;AF1=0.4999;CI95=0.5,0.5;DP4=1,1,0,3;MQ=47;PV4=0.4,0.21,0.28,1 PL:DP:SP:GT:GQ 36,0,58:5:0:0/1:39 | |
| 16453 chr11 58619849 . C G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 16454 chr11 58658328 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16455 chr11 58680950 . A T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 16456 chr11 58682018 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 16457 chr11 58683399 . T TAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16458 chr11 58687874 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16459 chr11 58700422 . A G 6.98 . DP=2;AF1=0.5001;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,31:2:0:0/1:33 | |
| 16460 chr11 58704686 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 16461 chr11 58727872 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 16462 chr11 58732115 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 16463 chr11 58732152 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 16464 chr11 58777048 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 16465 chr11 58801853 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 16466 chr11 58830077 . ACCGC AC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16467 chr11 58837451 . G GCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16468 chr11 58877527 . A C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 16469 chr11 58885344 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16470 chr11 58903424 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 16471 chr11 58911977 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 16472 chr11 58919432 . A G 86 . DP=35;AF1=0.5;CI95=0.5,0.5;DP4=6,7,8,9;MQ=50;PV4=1,1.9e-10,0.061,1 PL:DP:SP:GT:GQ 116,0,255:30:0:0/1:99 | |
| 16473 chr11 58919813 . A G 97 . DP=51;AF1=0.5;CI95=0.5,0.5;DP4=14,14,8,10;MQ=50;PV4=0.77,4.7e-11,0.0069,1 PL:DP:SP:GT:GQ 127,0,255:46:1:0/1:99 | |
| 16474 chr11 58939220 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16475 chr11 58945635 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16476 chr11 58972488 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16477 chr11 58992638 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16478 chr11 58992729 . A C 6.02 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=46 PL:DP:SP:GT:GQ 36,6,0:2:0:1/1:49 | |
| 16479 chr11 59023110 . C CTTG 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 16480 chr11 59028327 . GG GGTGTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16481 chr11 59055059 . T G 31 . DP=8;AF1=0.5;CI95=0.5,0.5;DP4=2,0,4,0;MQ=48;PV4=1,0.0011,0.29,0.38 PL:DP:SP:GT:GQ 61,0,57:6:0:0/1:59 | |
| 16482 chr11 59187678 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16483 chr11 59189405 . T C 71 . DP=28;AF1=0.5;CI95=0.5,0.5;DP4=11,0,14,0;MQ=46;PV4=1,2.6e-05,4.2e-06,1 PL:DP:SP:GT:GQ 101,0,189:25:0:0/1:99 | |
| 16484 chr11 59189411 . T C 99 . DP=30;AF1=0.5;CI95=0.5,0.5;DP4=9,1,16,0;MQ=45;PV4=0.38,0.094,7.1e-06,1 PL:DP:SP:GT:GQ 144,0,165:26:0:0/1:99 | |
| 16485 chr11 59201450 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16486 chr11 59205225 . AG AGTTATG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16487 chr11 59210535 . C CGTA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 16488 chr11 59211268 . CGGAGGA CAGGA 7.35 . INDEL;DP=24;AF1=0.5;CI95=0.5,0.5;DP4=1,3,3,0;MQ=48;PV4=0.14,1,1,0.47 PL:DP:SP:GT:GQ 44,0,75:7:8:0/1:47 | |
| 16489 chr11 59225129 . GC G 57.5 . INDEL;DP=23;AF1=0.5;CI95=0.5,0.5;DP4=1,6,1,6;MQ=50;PV4=1,0.018,1,1 PL:DP:SP:GT:GQ 95,0,150:14:0:0/1:98 | |
| 16490 chr11 59225221 . T C 22 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=9,8,1,4;MQ=49;PV4=0.32,0.0041,3.1e-06,1 PL:DP:SP:GT:GQ 52,0,255:22:5:0/1:55 | |
| 16491 chr11 59240254 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16492 chr11 59245593 . G T 37 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=5,0,7,0;MQ=49;PV4=1,0.011,0.19,1 PL:DP:SP:GT:GQ 67,0,113:12:0:0/1:70 | |
| 16493 chr11 59259263 . GT GTTCT 5.08 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,83:3:0:0/1:44 | |
| 16494 chr11 59277719 . T TCGAATGC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 16495 chr11 59282838 . G A 53 . DP=28;AF1=0.5;CI95=0.5,0.5;DP4=4,5,4,3;MQ=49;PV4=1,0.0083,0.01,1 PL:DP:SP:GT:GQ 83,0,210:16:0:0/1:86 | |
| 16496 chr11 59283041 . C T 70 . DP=11;AF1=0.5;CI95=0.5,0.5;DP4=1,1,3,2;MQ=47;PV4=1,0.0017,0.022,0.0025 PL:DP:SP:GT:GQ 100,0,72:7:0:0/1:75 | |
| 16497 chr11 59285699 . G T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 16498 chr11 59295916 . ACC ACCCTCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16499 chr11 59311003 . ta tAAGTCTGa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16500 chr11 59322536 . AT ATATATTTGCT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 16501 chr11 59344469 . G C 4.61 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 34,6,0:2:0:1/1:49 | |
| 16502 chr11 59345601 . A T 21 . DP=13;AF1=0.5;CI95=0.5,0.5;DP4=3,0,3,0;MQ=46;PV4=1,1,0.0074,1 PL:DP:SP:GT:GQ 51,0,44:6:0:0/1:46 | |
| 16503 chr11 59345615 . T G 18.1 . DP=11;AF1=0.5;CI95=0.5,0.5;DP4=2,0,3,0;MQ=45;PV4=1,0.21,0.025,0.042 PL:DP:SP:GT:GQ 48,0,50:5:0:0/1:49 | |
| 16504 chr11 59348931 . A C 14.2 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=5,1,3,0;MQ=49;PV4=1,0.084,0.0031,1 PL:DP:SP:GT:GQ 44,0,158:9:0:0/1:47 | |
| 16505 chr11 59349124 . A G 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,42:2:0:0/1:34 | |
| 16506 chr11 59367464 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16507 chr11 59369753 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16508 chr11 59371854 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 16509 chr11 59373672 . C T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 16510 chr11 59424049 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 16511 chr11 59424614 . GA GAAA 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 16512 chr11 59435926 . GT GTTGGTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16513 chr11 59465247 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16514 chr11 59465254 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16515 chr11 59480951 . T C 37.5 . DP=22;AF1=1;CI95=0.5,1;DP4=0,0,2,2;MQ=48 PL:DP:SP:GT:GQ 70,12,0:4:0:1/1:72 | |
| 16516 chr11 59480969 . A G 99 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=12,4,7,1;MQ=48;PV4=0.63,0.00016,1.1e-10,1 PL:DP:SP:GT:GQ 162,0,255:24:2:0/1:99 | |
| 16517 chr11 59481301 . T TAAGGCGAG 12.7 . INDEL;DP=10;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16518 chr11 59498930 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16519 chr11 59537980 . C CAGAGT 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16520 chr11 59545716 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 16521 chr11 59559591 . T G 46.5 . DP=9;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=47 PL:DP:SP:GT:GQ 79,12,0:4:0:1/1:72 | |
| 16522 chr11 59559845 . TA TAAGA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 16523 chr11 59561327 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16524 chr11 59565403 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16525 chr11 59609169 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 16526 chr11 59616254 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 16527 chr11 59626571 . A C 10.4 . DP=28;AF1=0.5;CI95=0.5,0.5;DP4=3,10,6,0;MQ=50;PV4=0.0031,9.9e-06,0.00072,0.34 PL:DP:SP:GT:GQ 40,0,255:19:25:0/1:43 | |
| 16528 chr11 59653395 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16529 chr11 59653405 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16530 chr11 59660152 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16531 chr11 59689805 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16532 chr11 59690446 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 16533 chr11 59697593 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 16534 chr11 59712708 . T G 6.2 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,42:2:0:0/1:37 | |
| 16535 chr11 59731465 . T TCA 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 16536 chr11 59745778 . TA TAGCCTCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16537 chr11 59773911 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16538 chr11 59773916 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16539 chr11 59798673 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 16540 chr11 59822506 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 16541 chr11 59830103 . A G 38 . DP=50;AF1=0.5;CI95=0.5,0.5;DP4=5,21,1,19;MQ=50;PV4=0.21,1.8e-27,0.022,0.088 PL:DP:SP:GT:GQ 68,0,255:46:7:0/1:71 | |
| 16542 chr11 59849023 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 16543 chr11 59849162 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16544 chr11 59893318 . a aAGTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16545 chr11 59899406 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 16546 chr11 59905743 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16547 chr11 59909518 . AGG A 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 16548 chr11 59924847 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16549 chr11 59930980 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 16550 chr11 59935008 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 16551 chr11 59937079 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16552 chr11 59947252 . C T 99 . DP=19;AF1=1;CI95=1,1;DP4=1,0,17,0;MQ=46;PV4=1,1,0.015,1 PL:DP:SP:GT:GQ 178,36,0:18:0:1/1:99 | |
| 16553 chr11 59952035 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16554 chr11 59976113 . C A 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16555 chr11 59976207 . G T 4.13 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16556 chr11 59997335 . T C 42.3 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=49 PL:DP:SP:GT:GQ 75,15,0:5:0:1/1:75 | |
| 16557 chr11 59999956 . G C 4.77 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,35:2:0:0/1:34 | |
| 16558 chr11 60032652 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 16559 chr11 60036408 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 16560 chr11 60059780 . A C 30 . DP=23;AF1=0.5;CI95=0.5,0.5;DP4=3,3,0,5;MQ=47;PV4=0.18,0.12,0.0046,1 PL:DP:SP:GT:GQ 60,0,139:11:7:0/1:63 | |
| 16561 chr11 60068824 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16562 chr11 60070176 . A G 81 . DP=31;AF1=0.5;CI95=0.5,0.5;DP4=4,7,2,16;MQ=49;PV4=0.16,2.7e-20,0.17,1 PL:DP:SP:GT:GQ 111,0,255:29:8:0/1:99 | |
| 16563 chr11 60072926 . t tCCTCTCAG 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 16564 chr11 60073702 . A T 99 . DP=18;AF1=1;CI95=1,1;DP4=0,0,0,14;MQ=47 PL:DP:SP:GT:GQ 148,42,0:14:0:1/1:99 | |
| 16565 chr11 60078098 . gagtgaagt gagt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16566 chr11 60088164 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 16567 chr11 60108278 . T C 36 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=42 PL:DP:SP:GT:GQ 68,9,0:3:0:1/1:63 | |
| 16568 chr11 60108291 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16569 chr11 60135923 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16570 chr11 60146264 . G C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 16571 chr11 60152482 . A G 48 . DP=10;AF1=0.5;CI95=0.5,0.5;DP4=5,0,4,0;MQ=48;PV4=1,5.6e-05,0.0068,1 PL:DP:SP:GT:GQ 78,0,156:9:0:0/1:81 | |
| 16572 chr11 60152563 . T A 99 . DP=23;AF1=1;CI95=1,1;DP4=0,1,15,5;MQ=46;PV4=0.29,0.44,0.19,1 PL:DP:SP:GT:GQ 214,37,0:21:0:1/1:99 | |
| 16573 chr11 60152584 . G A 99 . DP=28;AF1=1;CI95=0.5,1;DP4=1,1,9,14;MQ=47;PV4=1,0.012,0.11,1 PL:DP:SP:GT:GQ 186,15,0:25:0:1/1:75 | |
| 16574 chr11 60154533 . T TTGTGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16575 chr11 60157107 . T G 46.1 . DP=22;AF1=1;CI95=1,1;DP4=0,1,0,17;MQ=50;PV4=1,2.4e-07,0.32,1 PL:DP:SP:GT:GQ 79,22,0:18:0:1/1:88 | |
| 16576 chr11 60164204 . G A 6.2 . DP=13;AF1=0.4999;CI95=0.5,0.5;DP4=2,0,1,1;MQ=47;PV4=1,0.21,1,1 PL:DP:SP:GT:GQ 35,0,48:4:0:0/1:38 | |
| 16577 chr11 60164634 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16578 chr11 60165352 . ATT A 99 . INDEL;DP=36;AF1=1;CI95=1,1;DP4=1,1,15,15;MQ=50;PV4=1,1,0.4,1 PL:DP:SP:GT:GQ 255,35,0:32:0:1/1:99 | |
| 16579 chr11 60168758 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16580 chr11 60186146 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16581 chr11 60198326 . ACC AC 19.3 . INDEL;DP=36;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=50 PL:DP:SP:GT:GQ 58,6,0:2:0:1/1:49 | |
| 16582 chr11 60198328 . C T 65.2 . DP=38;AF1=0.7303;CI95=0.5,1;DP4=0,1,3,4;MQ=49;PV4=1,0.15,0.14,1 PL:DP:SP:GT:GQ 94,0,2:8:0:0/1:3 | |
| 16583 chr11 60198328 . C CCT 7.36 . INDEL;DP=38;AF1=0.502;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,21:2:0:0/1:24 | |
| 16584 chr11 60233614 . T C 13.2 . DP=41;AF1=0.5;CI95=0.5,0.5;DP4=8,17,9,0;MQ=49;PV4=0.00093,1e-05,1.2e-05,0.34 PL:DP:SP:GT:GQ 43,0,255:34:30:0/1:46 | |
| 16585 chr11 60233879 . C G 28.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=42 PL:DP:SP:GT:GQ 60,6,0:2:0:1/1:49 | |
| 16586 chr11 60235156 . GCT GCTGACT 7.36 . INDEL;DP=2;AF1=0.5016;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,22:2:0:0/1:25 | |
| 16587 chr11 60235971 . T G 14.2 . DP=8;AF1=0.5032;CI95=0.5,0.5;DP4=0,1,0,3;MQ=48;PV4=1,0.049,0.26,1 PL:DP:SP:GT:GQ 44,0,19:4:0:0/1:22 | |
| 16588 chr11 60244143 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 16589 chr11 60244376 . G T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 16590 chr11 60248649 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16591 chr11 60264303 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 16592 chr11 60264629 . C T 12 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 43,6,0:2:0:1/1:49 | |
| 16593 chr11 60264755 . G A 72 . DP=18;AF1=1;CI95=1,1;DP4=0,0,15,0;MQ=50 PL:DP:SP:GT:GQ 105,45,0:15:0:1/1:99 | |
| 16594 chr11 60264947 . C T 99 . DP=57;AF1=1;CI95=1,1;DP4=0,1,15,27;MQ=46;PV4=1,1,0.024,1 PL:DP:SP:GT:GQ 255,112,0:43:0:1/1:99 | |
| 16595 chr11 60265002 . C T 17.1 . DP=30;AF1=0.5;CI95=0.5,0.5;DP4=10,8,3,4;MQ=50;PV4=0.67,1.4e-09,0.13,1 PL:DP:SP:GT:GQ 47,0,255:25:2:0/1:50 | |
| 16596 chr11 60265164 . G A 23 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=48 PL:DP:SP:GT:GQ 55,9,0:3:0:1/1:63 | |
| 16597 chr11 60266509 . G T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 16598 chr11 60267461 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16599 chr11 60268679 . G C 99 . DP=26;AF1=1;CI95=1,1;DP4=0,0,3,19;MQ=48 PL:DP:SP:GT:GQ 204,66,0:22:0:1/1:99 | |
| 16600 chr11 60268736 . C A 23 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=48 PL:DP:SP:GT:GQ 55,9,0:3:0:1/1:63 | |
| 16601 chr11 60271095 . A G 6.98 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,44:2:0:0/1:38 | |
| 16602 chr11 60271325 . A C,T 99 . DP=22;AF1=1;CI95=1,1;DP4=0,0,3,13;MQ=49 PL:DP:SP:GT:GQ 145,45,139,0,27,139:16:0:1/1:99 | |
| 16603 chr11 60285528 . T G 46 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=8,0,5,1;MQ=49;PV4=0.43,3.7e-09,0.014,1 PL:DP:SP:GT:GQ 76,0,198:14:0:0/1:79 | |
| 16604 chr11 60285575 . A G 99 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=4,2,5,4;MQ=48;PV4=1,0.0015,0.0079,1 PL:DP:SP:GT:GQ 141,0,179:15:0:0/1:99 | |
| 16605 chr11 60290240 . A C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 16606 chr11 60290828 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 16607 chr11 60292118 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 16608 chr11 60292675 . T C 16.4 . DP=5;AF1=0.543;CI95=0.5,1;DP4=1,0,3,0;MQ=49;PV4=1,1,0.29,0.47 PL:DP:SP:GT:GQ 46,0,8:4:0:0/1:11 | |
| 16609 chr11 60292840 . t tGAAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16610 chr11 60299243 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16611 chr11 60310430 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 16612 chr11 60327524 . G T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 16613 chr11 60335688 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 16614 chr11 60336985 . ga gAa 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 16615 chr11 60351975 . AAT AATTTTTAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16616 chr11 60404645 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16617 chr11 60409034 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16618 chr11 60432589 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 16619 chr11 60459571 . G A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 16620 chr11 60476273 . C G 27 . DP=26;AF1=0.5;CI95=0.5,0.5;DP4=4,6,0,6;MQ=49;PV4=0.23,0.00088,0.072,0.38 PL:DP:SP:GT:GQ 57,0,255:16:6:0/1:60 | |
| 16621 chr11 60509133 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16622 chr11 60522318 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16623 chr11 60550684 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 16624 chr11 60551033 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16625 chr11 60555709 . a aGACC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16626 chr11 60557484 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16627 chr11 60559805 . A G 13.2 . DP=36;AF1=0.5;CI95=0.5,0.5;DP4=3,23,3,6;MQ=50;PV4=0.16,4.9e-08,0.017,1 PL:DP:SP:GT:GQ 43,0,255:35:8:0/1:46 | |
| 16628 chr11 60585897 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16629 chr11 60586430 . agc aGCGGCgc 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 16630 chr11 60593072 . TGG TGGGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16631 chr11 60594737 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16632 chr11 60594895 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 16633 chr11 60608247 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 16634 chr11 60608839 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 16635 chr11 60610207 . A T 4.77 . DP=11;AF1=0.4999;CI95=0.5,0.5;DP4=3,2,3,0;MQ=48;PV4=0.46,0.082,0.043,1 PL:DP:SP:GT:GQ 33,0,136:8:3:0/1:36 | |
| 16636 chr11 60611812 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16637 chr11 60612286 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16638 chr11 60617646 . T C 27 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,1,2;MQ=49 PL:DP:SP:GT:GQ 59,9,0:3:0:1/1:63 | |
| 16639 chr11 60620594 . GA GATCTA 7.36 . INDEL;DP=3;AF1=0.502;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,21:2:0:0/1:24 | |
| 16640 chr11 60620691 . AC ATAGCCC 3.25 . INDEL;DP=10;AF1=0.5;CI95=0.5,0.5;DP4=1,2,0,1;MQ=50;PV4=1,1,1,0.46 PL:DP:SP:GT:GQ 38,0,40:4:0:0/1:39 | |
| 16641 chr11 60626775 . tcagac tCAGAcagac 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16642 chr11 60638470 . A G 95 . DP=27;AF1=1;CI95=1,1;DP4=0,0,0,14;MQ=48 PL:DP:SP:GT:GQ 128,42,0:14:0:1/1:99 | |
| 16643 chr11 60655171 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16644 chr11 60655839 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16645 chr11 60660463 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 16646 chr11 60665434 . T C 19.1 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=0,6,0,3;MQ=48;PV4=1,0.015,0.014,1 PL:DP:SP:GT:GQ 49,0,165:9:0:0/1:52 | |
| 16647 chr11 60674435 . G T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 16648 chr11 60694843 . G GGGGGTTACCCTGA 99 . INDEL;DP=29;AF1=1;CI95=1,1;DP4=0,0,9,6;MQ=50 PL:DP:SP:GT:GQ 197,45,0:15:0:1/1:99 | |
| 16649 chr11 60702689 . A AGC 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,75:3:0:0/1:44 | |
| 16650 chr11 60703260 . A G 48 . DP=8;AF1=0.5;CI95=0.5,0.5;DP4=3,0,3,1;MQ=48;PV4=1,0.00033,0.066,1 PL:DP:SP:GT:GQ 78,0,107:7:0:0/1:81 | |
| 16651 chr11 60703403 . G A 42 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=0,8,0,9;MQ=49;PV4=1,6.6e-14,0.095,1 PL:DP:SP:GT:GQ 72,0,192:17:0:0/1:75 | |
| 16652 chr11 60704889 . C G 3.01 . DP=17;AF1=0.4997;CI95=0.5,0.5;DP4=0,4,0,2;MQ=49;PV4=1,0.28,0.021,1 PL:DP:SP:GT:GQ 30,0,96:6:0:0/1:33 | |
| 16653 chr11 60705019 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16654 chr11 60705454 . A G 99 . DP=16;AF1=1;CI95=1,1;DP4=0,0,2,7;MQ=46 PL:DP:SP:GT:GQ 179,27,0:9:0:1/1:99 | |
| 16655 chr11 60707243 . G A 3.54 . DP=5;AF1=0.4998;CI95=0.5,0.5;DP4=1,2,0,2;MQ=49;PV4=1,0.31,0,0.42 PL:DP:SP:GT:GQ 31,0,77:5:0:0/1:34 | |
| 16656 chr11 60712034 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 16657 chr11 60712077 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 16658 chr11 60719838 . GCCAAAA G 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 16659 chr11 60723367 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16660 chr11 60736069 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 16661 chr11 60737857 . A G 27.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=46 PL:DP:SP:GT:GQ 59,6,0:2:0:1/1:49 | |
| 16662 chr11 60741829 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16663 chr11 60760705 . C T 4.13 . DP=3;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,1;MQ=49;PV4=1,0.019,0,0.29 PL:DP:SP:GT:GQ 32,0,41:3:0:0/1:34 | |
| 16664 chr11 60766132 . GT GTGGGCATT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16665 chr11 60776334 . A G 37 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=47 PL:DP:SP:GT:GQ 69,9,0:3:0:1/1:63 | |
| 16666 chr11 60781110 . G A 27 . DP=5;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,2;MQ=47;PV4=1,0.19,0.022,1 PL:DP:SP:GT:GQ 57,0,97:5:0:0/1:60 | |
| 16667 chr11 60783135 . A G 99 . DP=37;AF1=1;CI95=1,1;DP4=0,2,26,4;MQ=49;PV4=0.03,0.014,0.28,1 PL:DP:SP:GT:GQ 147,41,0:32:15:1/1:99 | |
| 16668 chr11 60795599 . g gTGAACAGC 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 16669 chr11 60810516 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 16670 chr11 60828082 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16671 chr11 60834201 . CA CACATGA 7.35 . INDEL;DP=2;AF1=0.5001;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,36:2:0:0/1:38 | |
| 16672 chr11 60856692 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16673 chr11 60860934 . C G 6.98 . DP=2;AF1=0.5001;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,32:2:0:0/1:34 | |
| 16674 chr11 60883952 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 16675 chr11 60886292 . TCA TCACAACACA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16676 chr11 60889042 . T G 6.98 . DP=14;AF1=0.4999;CI95=0.5,0.5;DP4=7,0,3,0;MQ=49;PV4=1,0.0038,0.0011,1 PL:DP:SP:GT:GQ 36,0,179:10:0:0/1:39 | |
| 16677 chr11 60892606 . A G 99 . DP=36;AF1=1;CI95=1,1;DP4=0,1,5,26;MQ=47;PV4=1,0.21,1,1 PL:DP:SP:GT:GQ 238,66,0:32:0:1/1:99 | |
| 16678 chr11 60902775 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 16679 chr11 60913096 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 16680 chr11 60915234 . A T 4.61 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=45 PL:DP:SP:GT:GQ 34,6,0:2:0:1/1:49 | |
| 16681 chr11 60928098 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16682 chr11 60943778 . C T 17.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=48 PL:DP:SP:GT:GQ 49,6,0:2:0:1/1:49 | |
| 16683 chr11 60956030 . G A 8.65 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 16684 chr11 60960225 . A G 31.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=42 PL:DP:SP:GT:GQ 63,6,0:2:0:1/1:49 | |
| 16685 chr11 60963756 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 16686 chr11 60974846 . C G 5.46 . DP=9;AF1=0.4999;CI95=0.5,0.5;DP4=3,0,3,0;MQ=49;PV4=1,0.0029,0.12,0.29 PL:DP:SP:GT:GQ 34,0,104:6:0:0/1:37 | |
| 16687 chr11 61018642 . C T 63 . DP=13;AF1=0.5;CI95=0.5,0.5;DP4=4,3,4,1;MQ=48;PV4=0.58,0.0044,0.0021,1 PL:DP:SP:GT:GQ 93,0,222:12:2:0/1:96 | |
| 16688 chr11 61026345 . CA CAAGA 3.25 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=3,0,0,1;MQ=49;PV4=0.25,1,1,0.27 PL:DP:SP:GT:GQ 38,0,93:4:0:0/1:41 | |
| 16689 chr11 61033130 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 16690 chr11 61039261 . C T 99 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=0,9,0,9;MQ=48;PV4=1,0.0012,2.9e-05,0.21 PL:DP:SP:GT:GQ 132,0,196:18:0:0/1:99 | |
| 16691 chr11 61042040 . G A 47 . DP=13;AF1=0.5;CI95=0.5,0.5;DP4=2,7,1,3;MQ=48;PV4=1,0.014,0.0004,0.29 PL:DP:SP:GT:GQ 77,0,248:13:0:0/1:80 | |
| 16692 chr11 61044482 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16693 chr11 61047182 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16694 chr11 61047750 . T C 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 16695 chr11 61053921 . C T 48 . DP=20;AF1=0.5;CI95=0.5,0.5;DP4=0,10,0,7;MQ=49;PV4=1,0.0011,0.048,0.49 PL:DP:SP:GT:GQ 78,0,199:17:0:0/1:81 | |
| 16696 chr11 61057188 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16697 chr11 61058395 . G C 15.1 . DP=44;AF1=0.5;CI95=0.5,0.5;DP4=8,16,0,9;MQ=49;PV4=0.073,1e-05,0.00025,1 PL:DP:SP:GT:GQ 45,0,255:33:11:0/1:48 | |
| 16698 chr11 61058867 . T C 12.2 . DP=12;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=50 PL:DP:SP:GT:GQ 44,9,0:3:0:1/1:63 | |
| 16699 chr11 61071331 . C T 24 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=11,2,4,0;MQ=49;PV4=1,9.7e-05,8.2e-09,0.29 PL:DP:SP:GT:GQ 54,0,255:17:0:0/1:57 | |
| 16700 chr11 61075333 . ac aCAGc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16701 chr11 61076372 . T C 63.1 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,6,0;MQ=47 PL:DP:SP:GT:GQ 96,18,0:6:0:1/1:90 | |
| 16702 chr11 61099385 . G GTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16703 chr11 61110358 . AAGGG A 3.25 . INDEL;DP=7;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,114:4:0:0/1:41 | |
| 16704 chr11 61110364 . T A 9.89 . DP=5;AF1=0.5554;CI95=0.5,1;DP4=0,1,0,2;MQ=46;PV4=1,1,0.089,1 PL:DP:SP:GT:GQ 39,0,7:3:0:0/1:10 | |
| 16705 chr11 61111020 . G A 31 . DP=5;AF1=0.5;CI95=0.5,0.5;DP4=1,2,0,2;MQ=47;PV4=1,0,0,0.028 PL:DP:SP:GT:GQ 61,0,127:5:0:0/1:64 | |
| 16706 chr11 61113469 . G C 57.5 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=46 PL:DP:SP:GT:GQ 90,12,0:4:0:1/1:72 | |
| 16707 chr11 61116016 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16708 chr11 61123742 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16709 chr11 61123965 . A G 58.3 . DP=13;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=46 PL:DP:SP:GT:GQ 91,15,0:5:0:1/1:75 | |
| 16710 chr11 61124434 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 16711 chr11 61124941 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 16712 chr11 61131695 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16713 chr11 61152363 . t tAAACACAA 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=48 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 16714 chr11 61157023 . C T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 16715 chr11 61157450 . T C 6.2 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,44:2:0:0/1:37 | |
| 16716 chr11 61174797 . G T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 16717 chr11 61210409 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 16718 chr11 61216514 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 16719 chr11 61234271 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 16720 chr11 61252175 . T G 19.1 . DP=11;AF1=0.5;CI95=0.5,0.5;DP4=2,4,0,4;MQ=47;PV4=0.47,0.22,0.078,1 PL:DP:SP:GT:GQ 49,0,119:10:3:0/1:52 | |
| 16721 chr11 61253270 . G A 9.52 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=4,1,3,0;MQ=48;PV4=1,0.49,0.13,1 PL:DP:SP:GT:GQ 39,0,77:8:0:0/1:42 | |
| 16722 chr11 61253586 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16723 chr11 61253808 . A C 6.2 . DP=13;AF1=0.4999;CI95=0.5,0.5;DP4=8,1,4,0;MQ=50;PV4=1,3.1e-06,0.011,0.47 PL:DP:SP:GT:GQ 35,0,240:13:0:0/1:38 | |
| 16724 chr11 61257573 . C CTT 11.8 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 16725 chr11 61258077 . A G 4.77 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 16726 chr11 61259387 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 16727 chr11 61263817 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 16728 chr11 61264863 . T G 3.59 . DP=2;AF1=0.51;CI95=0.5,0.5;DP4=1,0,0,1;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,14:2:0:0/1:17 | |
| 16729 chr11 61290513 . A T 6.2 . DP=26;AF1=0.4999;CI95=0.5,0.5;DP4=7,0,3,0;MQ=48;PV4=1,1,0.15,1 PL:DP:SP:GT:GQ 35,0,56:10:0:0/1:38 | |
| 16730 chr11 61291922 . A G 5.46 . DP=39;AF1=0.4999;CI95=0.5,0.5;DP4=7,8,2,3;MQ=49;PV4=1,0.0009,0.061,0.067 PL:DP:SP:GT:GQ 34,0,255:20:0:0/1:37 | |
| 16731 chr11 61296935 . a aAATG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16732 chr11 61299932 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16733 chr11 61302631 . GG GGTATG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16734 chr11 61314262 . C T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 16735 chr11 61319000 . C G 25 . DP=11;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,4;MQ=48;PV4=1,0.2,0.19,1 PL:DP:SP:GT:GQ 55,0,48:7:0:0/1:50 | |
| 16736 chr11 61323536 . G GCA 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,1,1,0.35 PL:DP:SP:GT:GQ 41,0,68:3:0:0/1:44 | |
| 16737 chr11 61334659 . C G 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16738 chr11 61342642 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 16739 chr11 61349366 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 16740 chr11 61358569 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16741 chr11 61358647 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=46 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16742 chr11 61365089 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16743 chr11 61371500 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 16744 chr11 61382946 . A G 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=43;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,41:2:0:0/1:34 | |
| 16745 chr11 61396620 . A C 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 16746 chr11 61405278 . CC CCGAGAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16747 chr11 61406155 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16748 chr11 61411083 . C A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 16749 chr11 61416326 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 16750 chr11 61418974 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16751 chr11 61421045 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16752 chr11 61452992 . C CTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16753 chr11 61453243 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 16754 chr11 61469089 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16755 chr11 61472810 . CTTGT CT 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 16756 chr11 61487757 . T C 4.13 . DP=15;AF1=0.4998;CI95=0.5,0.5;DP4=0,7,0,3;MQ=48;PV4=1,1,0.041,1 PL:DP:SP:GT:GQ 32,0,76:10:0:0/1:35 | |
| 16757 chr11 61492782 . A T 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,1;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,35:2:0:0/1:32 | |
| 16758 chr11 61496177 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 16759 chr11 61500737 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16760 chr11 61500925 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16761 chr11 61501081 . G GCGACAT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 16762 chr11 61501102 . AC ACTGTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16763 chr11 61514821 . A G 30.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=43 PL:DP:SP:GT:GQ 62,6,0:2:0:1/1:49 | |
| 16764 chr11 61530716 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 16765 chr11 61532200 . C T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 16766 chr11 61538977 . C CCTGA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16767 chr11 61539470 . T TCCCACAC 3.25 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,1;MQ=50;PV4=1,1,1,0.23 PL:DP:SP:GT:GQ 38,0,105:4:0:0/1:41 | |
| 16768 chr11 61539534 . A T 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 16769 chr11 61542451 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 16770 chr11 61547050 . TGAG T 3.25 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,44:2:0:0/1:40 | |
| 16771 chr11 61548305 . c cGGTGGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16772 chr11 61549317 . A G 3.01 . DP=3;AF1=0.4997;CI95=0.5,0.5;DP4=2,0,1,0;MQ=48;PV4=1,0.037,0,1 PL:DP:SP:GT:GQ 30,0,83:3:0:0/1:33 | |
| 16773 chr11 61553658 . C A 10.4 . DP=11;AF1=0.5;CI95=0.5,0.5;DP4=0,5,0,4;MQ=49;PV4=1,0.0027,0.013,1 PL:DP:SP:GT:GQ 40,0,140:9:0:0/1:43 | |
| 16774 chr11 61553669 . C A,T 8.33 . DP=9;AF1=0.5939;CI95=0.5,1;DP4=0,1,0,5;MQ=47;PV4=1,1,0.2,0.3 PL:DP:SP:GT:GQ 58,21,31,26,0,44:6:0:0/1:7 | |
| 16775 chr11 61554224 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 16776 chr11 61554994 . A ACAGTGCC 6.55 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 43,0,44:2:0:0/1:43 | |
| 16777 chr11 61563511 . G A 3.01 . DP=3;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,31:2:0:0/1:30 | |
| 16778 chr11 61589359 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 16779 chr11 61596091 . AG AGGATGGG 4.42 . INDEL;DP=8;AF1=0.5005;CI95=0.5,0.5;DP4=0,2,0,2;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 40,0,27:4:0:0/1:30 | |
| 16780 chr11 61615542 . C T 27.1 . DP=11;AF1=0.508;CI95=0.5,0.5;DP4=1,0,5,0;MQ=49;PV4=1,0.06,1,0.052 PL:DP:SP:GT:GQ 57,0,15:6:0:0/1:18 | |
| 16781 chr11 61617402 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 16782 chr11 61619294 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 16783 chr11 61621304 . CGACAG C 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 16784 chr11 61624414 . T C 47.5 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=48 PL:DP:SP:GT:GQ 80,12,0:4:0:1/1:72 | |
| 16785 chr11 61630279 . C T 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 16786 chr11 61630713 . G T 6.2 . DP=23;AF1=0.4999;CI95=0.5,0.5;DP4=9,0,5,0;MQ=49;PV4=1,0.077,0.0013,1 PL:DP:SP:GT:GQ 35,0,110:14:0:0/1:38 | |
| 16787 chr11 61634600 . G T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 16788 chr11 61638044 . G A 35.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=42 PL:DP:SP:GT:GQ 67,6,0:2:0:1/1:49 | |
| 16789 chr11 61645182 . GC G 24.2 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=50 PL:DP:SP:GT:GQ 63,6,0:2:0:1/1:49 | |
| 16790 chr11 61650767 . a aACTCTCCAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16791 chr11 61673873 . C CTGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16792 chr11 61674913 . G C 11.3 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=4,2,3,0;MQ=49;PV4=0.5,0.1,0.0013,1 PL:DP:SP:GT:GQ 41,0,169:9:3:0/1:44 | |
| 16793 chr11 61713321 . G GCGCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16794 chr11 61719387 . T C 27.2 . DP=38;AF1=0.5263;CI95=0.5,1;DP4=1,0,1,2;MQ=48;PV4=1,1,0.16,1 PL:DP:SP:GT:GQ 57,0,10:4:0:0/1:13 | |
| 16795 chr11 61722556 . Tccacccccacccccaccccca Tccacccccaccccca 12.7 . INDEL;DP=4;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16796 chr11 61725498 . A G 6.79 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 37,6,0:2:0:1/1:49 | |
| 16797 chr11 61725599 . ATCCTCCTCCTCCTCC ATCCTCCTCCTCCTCCTCCTCC 27.2 . INDEL;DP=21;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=50 PL:DP:SP:GT:GQ 66,6,0:2:0:1/1:49 | |
| 16798 chr11 61726871 . G T 3.02 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16799 chr11 61730402 . C A 17.1 . DP=26;AF1=0.5;CI95=0.5,0.5;DP4=2,9,0,6;MQ=49;PV4=0.51,0.05,0.15,1 PL:DP:SP:GT:GQ 47,0,135:17:3:0/1:50 | |
| 16800 chr11 61731526 . A C 5.58 . DP=12;AF1=0.5206;CI95=0.5,1;DP4=1,0,2,0;MQ=46;PV4=1,1,0.14,0.44 PL:DP:SP:GT:GQ 34,0,11:3:0:0/1:14 | |
| 16801 chr11 61731532 . G C 9.31 . DP=10;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 16802 chr11 61762828 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16803 chr11 61763676 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 16804 chr11 61779766 . GC G 64 . INDEL;DP=5;AF1=1;CI95=0.5,1;DP4=0,0,3,1;MQ=46 PL:DP:SP:GT:GQ 104,12,0:4:0:1/1:72 | |
| 16805 chr11 61788262 . GG GGGCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16806 chr11 61797658 . t tACACTCGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16807 chr11 61798562 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 16808 chr11 61833196 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 16809 chr11 61837041 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16810 chr11 61840629 . CA CAGAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16811 chr11 61869413 . G GGCAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16812 chr11 61879724 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16813 chr11 61895443 . TA T 19.3 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=50 PL:DP:SP:GT:GQ 58,6,0:2:0:1/1:49 | |
| 16814 chr11 61897298 . G A 79.3 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=46 PL:DP:SP:GT:GQ 112,15,0:5:0:1/1:75 | |
| 16815 chr11 61898877 . ATCTC ATC 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 16816 chr11 61906374 . T C 99 . DP=21;AF1=1;CI95=1,1;DP4=0,0,12,6;MQ=43 PL:DP:SP:GT:GQ 255,54,0:18:0:1/1:99 | |
| 16817 chr11 61916299 . A G 13.2 . DP=13;AF1=0.5;CI95=0.5,0.5;DP4=3,2,0,3;MQ=48;PV4=0.2,0.18,0.078,1 PL:DP:SP:GT:GQ 43,0,131:8:7:0/1:46 | |
| 16818 chr11 61919404 . G C 20 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=2,2,0,4;MQ=49;PV4=0.43,0.18,1,1 PL:DP:SP:GT:GQ 50,0,88:8:4:0/1:53 | |
| 16819 chr11 61921787 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 16820 chr11 61937766 . A ACT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16821 chr11 61944677 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 16822 chr11 61977592 . T C 46.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=43 PL:DP:SP:GT:GQ 78,6,0:2:0:1/1:49 | |
| 16823 chr11 61978781 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 16824 chr11 61979523 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 16825 chr11 62009791 . G T 45.5 . DP=19;AF1=1;CI95=0.5,1;DP4=0,0,2,2;MQ=48 PL:DP:SP:GT:GQ 78,12,0:4:0:1/1:72 | |
| 16826 chr11 62012243 . G A 7.89 . DP=4;AF1=0.5128;CI95=0.5,0.5;DP4=0,1,0,2;MQ=44;PV4=1,1,0.3,1 PL:DP:SP:GT:GQ 37,0,13:3:0:0/1:16 | |
| 16827 chr11 62013076 . acttc a 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,42:2:0:0/1:43 | |
| 16828 chr11 62013925 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16829 chr11 62088548 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 16830 chr11 62098387 . A C 5.29 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=22 PL:DP:SP:GT:GQ 35,6,0:2:0:1/1:49 | |
| 16831 chr11 62098726 . C T 37 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=1,5,2,5;MQ=47;PV4=1,4.6e-11,1,0.43 PL:DP:SP:GT:GQ 67,0,182:13:0:0/1:70 | |
| 16832 chr11 62098773 . G A 3.54 . DP=8;AF1=0.4998;CI95=0.5,0.5;DP4=0,5,1,2;MQ=42;PV4=0.37,5.1e-05,0.088,0.0017 PL:DP:SP:GT:GQ 31,0,141:8:0:0/1:34 | |
| 16833 chr11 62119086 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16834 chr11 62120521 . T A 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,43:2:0:0/1:33 | |
| 16835 chr11 62125061 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16836 chr11 62140073 . T C 9.31 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=46 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 16837 chr11 62155026 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 16838 chr11 62155521 . C G 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 16839 chr11 62159866 . C CTTGACGAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16840 chr11 62160039 . tcaa t 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 16841 chr11 62168177 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 16842 chr11 62249454 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 16843 chr11 62249882 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 16844 chr11 62262638 . c cATGGGTTTGTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16845 chr11 62279940 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16846 chr11 62285340 . G C 6.98 . DP=21;AF1=0.4999;CI95=0.5,0.5;DP4=3,4,3,1;MQ=49;PV4=0.55,0.31,0.0012,0.23 PL:DP:SP:GT:GQ 36,0,128:11:3:0/1:39 | |
| 16847 chr11 62289400 . A AGGNNNNNNNNNNNN 83.7 . INDEL;DP=10;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=35 PL:DP:SP:GT:GQ 124,15,0:5:0:1/1:75 | |
| 16848 chr11 62292270 . A C 5.65 . DP=7;AF1=0.5335;CI95=0.5,1;DP4=1,0,2,0;MQ=48;PV4=1,1,0.33,1 PL:DP:SP:GT:GQ 34,0,9:3:0:0/1:12 | |
| 16849 chr11 62303437 . CG CGTTGG 3.25 . INDEL;DP=6;AF1=0.5;CI95=0.5,0.5;DP4=1,2,0,1;MQ=50;PV4=1,1,1,0.33 PL:DP:SP:GT:GQ 38,0,130:4:0:0/1:41 | |
| 16850 chr11 62303898 . A G 3.55 . DP=2;AF1=0.5011;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,23:2:0:0/1:25 | |
| 16851 chr11 62306771 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 16852 chr11 62320325 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16853 chr11 62343618 . C T 5.46 . DP=7;AF1=0.4999;CI95=0.5,0.5;DP4=0,2,0,2;MQ=47;PV4=1,0.071,0.37,1 PL:DP:SP:GT:GQ 34,0,52:4:0:0/1:37 | |
| 16854 chr11 62347591 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=46 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16855 chr11 62376647 . CAGGAGGAGGA CAGGAGGA 5.08 . INDEL;DP=7;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,0.024,1,0.4 PL:DP:SP:GT:GQ 41,0,83:3:0:0/1:44 | |
| 16856 chr11 62381951 . T C 22 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=3,10,5,0;MQ=49;PV4=0.0065,0.00058,0.0071,1 PL:DP:SP:GT:GQ 52,0,255:18:22:0/1:55 | |
| 16857 chr11 62384869 . T C 5.54 . DP=29;AF1=0.5128;CI95=0.5,0.5;DP4=0,1,2,0;MQ=48;PV4=0.33,1,1,1 PL:DP:SP:GT:GQ 34,0,13:3:0:0/1:16 | |
| 16858 chr11 62400374 . T C 3.54 . DP=4;AF1=0.4998;CI95=0.5,0.5;DP4=2,1,1,0;MQ=48;PV4=1,0.5,0,1 PL:DP:SP:GT:GQ 31,0,98:4:0:0/1:34 | |
| 16859 chr11 62414118 . G T 3.54 . DP=6;AF1=0.4998;CI95=0.5,0.5;DP4=1,1,0,2;MQ=48;PV4=1,0.058,0.21,1 PL:DP:SP:GT:GQ 31,0,45:4:0:0/1:34 | |
| 16860 chr11 62458959 . C A 3.54 . DP=14;AF1=0.5001;CI95=0.5,0.5;DP4=0,2,0,3;MQ=49;PV4=1,0.47,0.32,1 PL:DP:SP:GT:GQ 31,0,29:5:0:0/1:30 | |
| 16861 chr11 62462222 . T TGTAGTC 4.42 . INDEL;DP=8;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 40,0,44:2:0:0/1:42 | |
| 16862 chr11 62481476 . A G 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 16863 chr11 62489063 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 16864 chr11 62493912 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 16865 chr11 62509108 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16866 chr11 62518018 . GACCCCTACCCCTACCCCTACCCC GACCCCTACCCCTACCCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16867 chr11 62519565 . G C 6.98 . DP=16;AF1=0.4999;CI95=0.5,0.5;DP4=11,0,3,0;MQ=49;PV4=1,0.092,0.0052,1 PL:DP:SP:GT:GQ 36,0,196:14:0:0/1:39 | |
| 16868 chr11 62520842 . CAT CATAT 5.08 . INDEL;DP=6;AF1=0.5;CI95=0.5,0.5;DP4=1,1,0,1;MQ=50;PV4=1,1,1,0.38 PL:DP:SP:GT:GQ 41,0,66:3:0:0/1:44 | |
| 16869 chr11 62526266 . T A 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16870 chr11 62537006 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16871 chr11 62560244 . aa aACa 3.25 . INDEL;DP=10;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,1;MQ=50;PV4=1,1,1,0.16 PL:DP:SP:GT:GQ 38,0,67:4:0:0/1:41 | |
| 16872 chr11 62563353 . G A 16.9 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 48,6,0:2:0:1/1:49 | |
| 16873 chr11 62593082 . C G 5.46 . DP=7;AF1=0.4999;CI95=0.5,0.5;DP4=0,3,0,2;MQ=46;PV4=1,0.17,0.01,1 PL:DP:SP:GT:GQ 34,0,62:5:0:0/1:37 | |
| 16874 chr11 62604084 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 16875 chr11 62609675 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 16876 chr11 62621309 . G A 10.4 . DP=28;AF1=0.5;CI95=0.5,0.5;DP4=14,1,7,0;MQ=49;PV4=1,4.4e-07,0.0034,1 PL:DP:SP:GT:GQ 40,0,255:22:0:0/1:43 | |
| 16877 chr11 62622777 . TTCT TT 99 . INDEL;DP=20;AF1=0.5;CI95=0.5,0.5;DP4=3,1,11,4;MQ=50;PV4=1,0.00052,1,1 PL:DP:SP:GT:GQ 255,0,123:19:0:0/1:99 | |
| 16878 chr11 62635611 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 16879 chr11 62649074 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 16880 chr11 62652063 . A G 99 . DP=40;AF1=0.5;CI95=0.5,0.5;DP4=10,11,9,3;MQ=48;PV4=0.16,0.00041,1.9e-11,1 PL:DP:SP:GT:GQ 153,0,255:33:8:0/1:99 | |
| 16881 chr11 62677529 . C T 41 . DP=28;AF1=0.5;CI95=0.5,0.5;DP4=5,7,2,3;MQ=48;PV4=1,0.028,1.7e-05,1 PL:DP:SP:GT:GQ 71,0,255:17:0:0/1:74 | |
| 16882 chr11 62684689 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 16883 chr11 62691081 . A ACTGTTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16884 chr11 62726231 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16885 chr11 62735876 . cc cCTCTc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16886 chr11 62747145 . A G 87.1 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,2,4;MQ=48 PL:DP:SP:GT:GQ 120,18,0:6:0:1/1:90 | |
| 16887 chr11 62754822 . T A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 16888 chr11 62763258 . AG AGACGCTCGCTCTCG 99 . INDEL;DP=39;AF1=1;CI95=1,1;DP4=0,0,2,25;MQ=50 PL:DP:SP:GT:GQ 167,81,0:27:0:1/1:99 | |
| 16889 chr11 62782278 . C T 50 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=2,8,2,4;MQ=49;PV4=0.6,2.2e-05,0.0053,1 PL:DP:SP:GT:GQ 80,0,255:16:2:0/1:83 | |
| 16890 chr11 62784467 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16891 chr11 62814965 . G A 53.1 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,6;MQ=49 PL:DP:SP:GT:GQ 86,18,0:6:0:1/1:90 | |
| 16892 chr11 62815189 . A G 44 . DP=8;AF1=0.5;CI95=0.5,0.5;DP4=2,1,5,0;MQ=48;PV4=0.37,3.1e-05,0.073,1 PL:DP:SP:GT:GQ 74,0,118:8:0:0/1:77 | |
| 16893 chr11 62823868 . t tGTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16894 chr11 62849131 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 16895 chr11 62883531 . C T 9.52 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=10,0,5,0;MQ=44;PV4=1,2.2e-06,1,0.38 PL:DP:SP:GT:GQ 39,0,184:15:0:0/1:42 | |
| 16896 chr11 62884904 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16897 chr11 62896142 . C A 6.98 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 16898 chr11 62901647 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16899 chr11 62911079 . G C 45 . DP=10;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,6;MQ=48;PV4=1,0.00011,0.11,1 PL:DP:SP:GT:GQ 75,0,102:9:0:0/1:78 | |
| 16900 chr11 62911296 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16901 chr11 62911332 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 16902 chr11 62916285 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16903 chr11 62918775 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16904 chr11 62930964 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16905 chr11 62931484 . T C 99 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=3,4,5,3;MQ=47;PV4=0.62,0.33,1.7e-05,1 PL:DP:SP:GT:GQ 150,0,157:15:2:0/1:99 | |
| 16906 chr11 62932774 . G GT 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 16907 chr11 62951064 . C A 88 . DP=22;AF1=1;CI95=1,1;DP4=1,0,19,0;MQ=48;PV4=1,0.45,0.28,1 PL:DP:SP:GT:GQ 121,38,0:20:0:1/1:99 | |
| 16908 chr11 62951221 . C G 51 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=3,5,0,9;MQ=49;PV4=0.082,7.3e-06,0.024,1 PL:DP:SP:GT:GQ 81,0,246:17:11:0/1:84 | |
| 16909 chr11 63040047 . AG AGCTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16910 chr11 63040652 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 16911 chr11 63049183 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 16912 chr11 63064942 . T C 59 . DP=34;AF1=0.5;CI95=0.5,0.5;DP4=2,5,2,6;MQ=49;PV4=1,0.024,0.044,0.19 PL:DP:SP:GT:GQ 89,0,162:15:0:0/1:92 | |
| 16913 chr11 63064970 . T G 40 . DP=40;AF1=0.5;CI95=0.5,0.5;DP4=6,8,2,5;MQ=49;PV4=0.66,0.00068,0.0038,1 PL:DP:SP:GT:GQ 70,0,255:21:2:0/1:73 | |
| 16914 chr11 63066585 . T G 27 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=48 PL:DP:SP:GT:GQ 59,9,0:3:0:1/1:63 | |
| 16915 chr11 63071676 . C A 14.2 . DP=32;AF1=0.5;CI95=0.5,0.5;DP4=3,12,0,7;MQ=49;PV4=0.52,0.022,0.091,1 PL:DP:SP:GT:GQ 44,0,253:22:3:0/1:47 | |
| 16916 chr11 63084297 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16917 chr11 63092630 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16918 chr11 63109419 . T C 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 16919 chr11 63121606 . TA TAA 45.5 . INDEL;DP=8;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,4;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 83,0,75:8:0:0/1:77 | |
| 16920 chr11 63162119 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 16921 chr11 63169866 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16922 chr11 63174050 . C T 3.01 . DP=8;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,0,2;MQ=49;PV4=0.33,0.037,0.33,0.4 PL:DP:SP:GT:GQ 30,0,41:3:0:0/1:33 | |
| 16923 chr11 63174326 . CA CATTATA 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 16924 chr11 63210757 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 16925 chr11 63213613 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16926 chr11 63216181 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 16927 chr11 63231042 . G A 67 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=3,9,2,4;MQ=48;PV4=1,0.00037,0.00018,0.32 PL:DP:SP:GT:GQ 97,0,255:18:0:0/1:99 | |
| 16928 chr11 63237919 . C T 5.46 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,44:2:0:0/1:37 | |
| 16929 chr11 63251243 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 16930 chr11 63256441 . C G 34.5 . DP=30;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=49 PL:DP:SP:GT:GQ 67,12,0:4:0:1/1:72 | |
| 16931 chr11 63306540 . GG GGAGAGATCTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16932 chr11 63308341 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16933 chr11 63313644 . T C 34.2 . DP=20;AF1=0.5207;CI95=0.5,1;DP4=0,1,1,3;MQ=49;PV4=1,0.26,0.27,1 PL:DP:SP:GT:GQ 64,0,11:5:0:0/1:14 | |
| 16934 chr11 63320500 . C T 8.65 . DP=22;AF1=0.5002;CI95=0.5,0.5;DP4=0,3,1,4;MQ=47;PV4=1,1,0.074,1 PL:DP:SP:GT:GQ 38,0,30:8:0:0/1:32 | |
| 16935 chr11 63322550 . agt aGTATCgt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16936 chr11 63326467 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16937 chr11 63340991 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16938 chr11 63341363 . g gGGGCCAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16939 chr11 63357919 . C T 99 . DP=14;AF1=1;CI95=1,1;DP4=0,0,1,12;MQ=46 PL:DP:SP:GT:GQ 179,39,0:13:0:1/1:99 | |
| 16940 chr11 63361442 . G C 3.01 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=42;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,33:2:0:0/1:31 | |
| 16941 chr11 63373945 . taagtaaa taa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16942 chr11 63387886 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16943 chr11 63403840 . G A 7.8 . DP=20;AF1=0.5;CI95=0.5,0.5;DP4=1,7,0,3;MQ=49;PV4=1,0.0034,1.3e-05,1 PL:DP:SP:GT:GQ 37,0,216:11:0:0/1:40 | |
| 16944 chr11 63413962 . aaaataaata aaaata 14.7 . INDEL;DP=3;AF1=0.5064;CI95=0.5,0.5;DP4=1,0,2,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 52,0,16:3:0:0/1:19 | |
| 16945 chr11 63427082 . T G 12.3 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 16946 chr11 63427394 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16947 chr11 63429030 . at aTCAGTCTt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16948 chr11 63444206 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 16949 chr11 63466117 . C T 4.13 . DP=5;AF1=0.4998;CI95=0.5,0.5;DP4=2,0,3,0;MQ=50;PV4=1,0.023,1,1 PL:DP:SP:GT:GQ 32,0,62:5:0:0/1:35 | |
| 16950 chr11 63473203 . TA TACCAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16951 chr11 63474206 . T TCTACCTGGA 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 16952 chr11 63482304 . A AGATCTCTGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16953 chr11 63487433 . G C 4.13 . DP=19;AF1=0.4998;CI95=0.5,0.5;DP4=2,7,2,2;MQ=49;PV4=0.53,0.12,0.11,1 PL:DP:SP:GT:GQ 32,0,178:13:3:0/1:35 | |
| 16954 chr11 63491165 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16955 chr11 63492121 . G T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 16956 chr11 63507518 . act aCTct 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16957 chr11 63510399 . t tGTCTCCAG 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 16958 chr11 63520978 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 16959 chr11 63524599 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 16960 chr11 63535097 . T C 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,37:2:0:0/1:37 | |
| 16961 chr11 63567375 . G C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 16962 chr11 63568278 . C T 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16963 chr11 63593943 . A C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 16964 chr11 63619142 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 16965 chr11 63638296 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 16966 chr11 63666536 . G C 53 . DP=45;AF1=0.5;CI95=0.5,0.5;DP4=7,14,10,0;MQ=49;PV4=0.00046,0.023,4.3e-06,1 PL:DP:SP:GT:GQ 83,0,255:31:33:0/1:86 | |
| 16967 chr11 63675684 . G GTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16968 chr11 63677470 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16969 chr11 63682864 . CAGA C 5.8 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 16970 chr11 63710929 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 16971 chr11 63719891 . C T 99 . DP=40;AF1=1;CI95=1,1;DP4=1,1,19,15;MQ=48;PV4=1,1,0.088,1 PL:DP:SP:GT:GQ 255,62,0:36:0:1/1:99 | |
| 16972 chr11 63720086 . T G 75.1 . DP=25;AF1=1;CI95=1,1;DP4=0,0,1,6;MQ=48 PL:DP:SP:GT:GQ 108,21,0:7:0:1/1:84 | |
| 16973 chr11 63724747 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 16974 chr11 63735876 . at aTTTACt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16975 chr11 63740539 . AT ATCGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16976 chr11 63753982 . C T 12.3 . DP=3;AF1=0.501;CI95=0.5,0.5;DP4=0,1,0,2;MQ=47;PV4=1,0.21,0.13,1 PL:DP:SP:GT:GQ 42,0,24:3:0:0/1:27 | |
| 16977 chr11 63755961 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 16978 chr11 63764734 . TTT TTTCTT 5.08 . INDEL;DP=9;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,1,1,0.41 PL:DP:SP:GT:GQ 41,0,56:3:0:0/1:44 | |
| 16979 chr11 63766513 . G A,T 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,2;MQ=45 PL:DP:SP:GT:GQ 53,24,32,21,0,32:2:0:1/1:41 | |
| 16980 chr11 63772226 . C CCCCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16981 chr11 63781664 . GTCCTCC GTCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16982 chr11 63784763 . A ATCATC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16983 chr11 63790038 . TAAAA T 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16984 chr11 63791501 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16985 chr11 63805712 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 16986 chr11 63822482 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16987 chr11 63854922 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 16988 chr11 63869541 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 16989 chr11 63884164 . T C 6.98 . DP=10;AF1=0.4999;CI95=0.5,0.5;DP4=1,1,0,2;MQ=46;PV4=1,0.21,0.19,1 PL:DP:SP:GT:GQ 36,0,64:4:0:0/1:39 | |
| 16990 chr11 63885044 . C T 28.8 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=44 PL:DP:SP:GT:GQ 60,6,0:2:0:1/1:49 | |
| 16991 chr11 63885588 . C G 7.8 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=5,0,4,0;MQ=48;PV4=1,0.082,0.088,0.32 PL:DP:SP:GT:GQ 37,0,78:9:0:0/1:40 | |
| 16992 chr11 63923133 . TCC T 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 16993 chr11 63951374 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 16994 chr11 63951385 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 16995 chr11 63961909 . T C 84 . DP=38;AF1=0.5;CI95=0.5,0.5;DP4=15,6,9,5;MQ=49;PV4=0.72,3.7e-16,7.3e-05,1 PL:DP:SP:GT:GQ 114,0,255:35:1:0/1:99 | |
| 16996 chr11 63962299 . T TGCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 16997 chr11 63964657 . C T 99 . DP=12;AF1=1;CI95=1,1;DP4=0,0,10,0;MQ=47 PL:DP:SP:GT:GQ 137,30,0:10:0:1/1:99 | |
| 16998 chr11 63970238 . CTGTTTG CTG 99 . INDEL;DP=11;AF1=0.5;CI95=0.5,0.5;DP4=3,0,7,0;MQ=50;PV4=1,0.016,1,1 PL:DP:SP:GT:GQ 184,0,99:10:0:0/1:99 | |
| 16999 chr11 63976611 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 17000 chr11 63976689 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 17001 chr11 63987022 . C T 16.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 48,6,0:2:0:1/1:49 | |
| 17002 chr11 63987339 . C T 6.2 . DP=11;AF1=0.4999;CI95=0.5,0.5;DP4=3,3,0,3;MQ=49;PV4=0.46,0.0059,0.017,0.37 PL:DP:SP:GT:GQ 35,0,210:9:3:0/1:38 | |
| 17003 chr11 63990707 . G GTT 5.08 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,2,1,0;MQ=50;PV4=0.33,1,1,1 PL:DP:SP:GT:GQ 41,0,82:3:0:0/1:44 | |
| 17004 chr11 63990996 . ACCC ACC 99 . INDEL;DP=10;AF1=1;CI95=1,1;DP4=0,0,1,7;MQ=50 PL:DP:SP:GT:GQ 153,24,0:8:0:1/1:96 | |
| 17005 chr11 63992898 . A G 5.46 . DP=3;AF1=0.4999;CI95=0.5,0.5;DP4=1,1,1,0;MQ=48;PV4=1,0.32,0,0.24 PL:DP:SP:GT:GQ 34,0,86:3:0:0/1:37 | |
| 17006 chr11 63996650 . G C 5.46 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,41:2:0:0/1:36 | |
| 17007 chr11 63998689 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 17008 chr11 64003375 . CCA CCACA 3.25 . INDEL;DP=7;AF1=0.5;CI95=0.5,0.5;DP4=0,3,1,0;MQ=50;PV4=0.25,1,1,0.34 PL:DP:SP:GT:GQ 38,0,82:4:0:0/1:41 | |
| 17009 chr11 64011324 . C A 13.2 . DP=23;AF1=0.5;CI95=0.5,0.5;DP4=0,8,4,0;MQ=49;PV4=0.002,0.0043,0.16,1 PL:DP:SP:GT:GQ 43,0,184:12:27:0/1:46 | |
| 17010 chr11 64011441 . T C 99 . DP=30;AF1=1;CI95=1,1;DP4=0,0,4,22;MQ=47 PL:DP:SP:GT:GQ 255,78,0:26:0:1/1:99 | |
| 17011 chr11 64013998 . C T 8.69 . DP=4;AF1=0.5063;CI95=0.5,0.5;DP4=0,1,0,2;MQ=46;PV4=1,1,0.12,1 PL:DP:SP:GT:GQ 38,0,16:3:0:0/1:19 | |
| 17012 chr11 64014733 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 17013 chr11 64019281 . GA GAGGGAGAGAA 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=49 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 17014 chr11 64022459 . A G 17.1 . DP=16;AF1=1;CI95=0.5,1;DP4=0,0,1,2;MQ=50 PL:DP:SP:GT:GQ 49,9,0:3:0:1/1:63 | |
| 17015 chr11 64026401 . T C 3.01 . DP=35;AF1=0.4997;CI95=0.5,0.5;DP4=10,4,0,7;MQ=49;PV4=0.0039,0.00022,0.21,1 PL:DP:SP:GT:GQ 30,0,255:21:24:0/1:33 | |
| 17016 chr11 64050348 . ct cTGGGTt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17017 chr11 64055773 . C T 56 . DP=44;AF1=0.5;CI95=0.5,0.5;DP4=11,13,3,13;MQ=50;PV4=0.1,8.5e-15,0.0022,1 PL:DP:SP:GT:GQ 86,0,255:40:10:0/1:89 | |
| 17018 chr11 64064935 . GC GCCCC,GCTCGTAGAC 6.18 . INDEL;DP=13;AF1=0.5718;CI95=0.5,1;DP4=1,0,2,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 78,36,36,42,0,42:3:0:0/1:8 | |
| 17019 chr11 64075178 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 17020 chr11 64082139 . ctgtg ctg 34.5 . INDEL;DP=4;AF1=0.5001;CI95=0.5,0.5;DP4=1,0,2,0;MQ=50;PV4=1,1,1,0.28 PL:DP:SP:GT:GQ 72,0,34:3:0:0/1:37 | |
| 17021 chr11 64088435 . A G 74.1 . DP=23;AF1=1;CI95=0.5,1;DP4=0,0,1,5;MQ=48 PL:DP:SP:GT:GQ 107,18,0:6:0:1/1:90 | |
| 17022 chr11 64088598 . GA GAAA 12.7 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17023 chr11 64102918 . AA AATA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17024 chr11 64105180 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 17025 chr11 64105185 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 17026 chr11 64112760 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17027 chr11 64113523 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 17028 chr11 64116687 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 17029 chr11 64116843 . A C 20 . DP=13;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=49 PL:DP:SP:GT:GQ 52,9,0:3:0:1/1:63 | |
| 17030 chr11 64119452 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 17031 chr11 64121639 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17032 chr11 64137610 . G GTCCCTGA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,42:2:0:0/1:43 | |
| 17033 chr11 64147758 . t tCAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17034 chr11 64165433 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 17035 chr11 64188789 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 17036 chr11 64197542 . G GAAATAAAAC 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17037 chr11 64203953 . C CCAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17038 chr11 64212843 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 17039 chr11 64219668 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17040 chr11 64219747 . G A 19.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 51,6,0:2:0:1/1:49 | |
| 17041 chr11 64227508 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17042 chr11 64231988 . aggg aGGGGggg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17043 chr11 64245128 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 17044 chr11 64246514 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17045 chr11 64275962 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 17046 chr11 64323508 . G A 55 . DP=44;AF1=0.5;CI95=0.5,0.5;DP4=14,14,1,7;MQ=49;PV4=0.1,2.9e-10,2.2e-13,1 PL:DP:SP:GT:GQ 85,0,255:36:10:0/1:88 | |
| 17047 chr11 64323854 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17048 chr11 64334089 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 17049 chr11 64347244 . G A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 17050 chr11 64351903 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17051 chr11 64354229 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 17052 chr11 64360375 . C G 11.3 . DP=9;AF1=0.5001;CI95=0.5,0.5;DP4=0,2,0,4;MQ=47;PV4=1,0.2,0.17,1 PL:DP:SP:GT:GQ 41,0,35:6:0:0/1:37 | |
| 17053 chr11 64360580 . GA GAGTA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17054 chr11 64360618 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17055 chr11 64367194 . G A 4.13 . DP=9;AF1=0.4998;CI95=0.5,0.5;DP4=3,1,2,0;MQ=48;PV4=1,0.19,0.011,1 PL:DP:SP:GT:GQ 32,0,98:6:0:0/1:35 | |
| 17056 chr11 64367736 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 17057 chr11 64368803 . TCACACACAC TCACACAC 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 17058 chr11 64383579 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 17059 chr11 64384055 . C G 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 17060 chr11 64384189 . AA AAGACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17061 chr11 64389277 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 17062 chr11 64389346 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 17063 chr11 64398579 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 17064 chr11 64398673 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 17065 chr11 64401037 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 17066 chr11 64414064 . tcttact tct 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17067 chr11 64419487 . C A 34 . DP=40;AF1=0.5;CI95=0.5,0.5;DP4=1,9,11,1;MQ=49;PV4=0.00029,0.26,0.01,1 PL:DP:SP:GT:GQ 64,0,116:22:35:0/1:67 | |
| 17068 chr11 64421057 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 17069 chr11 64423831 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 17070 chr11 64427747 . T C 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 17071 chr11 64452972 . A G 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 17072 chr11 64453037 . A ATC 3.25 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=3,0,1,0;MQ=50;PV4=1,1,1,0.11 PL:DP:SP:GT:GQ 38,0,96:4:0:0/1:41 | |
| 17073 chr11 64453268 . G A 94 . DP=50;AF1=0.5;CI95=0.5,0.5;DP4=1,5,2,15;MQ=49;PV4=1,0.0038,0.11,1 PL:DP:SP:GT:GQ 124,0,105:23:0:0/1:99 | |
| 17074 chr11 64463726 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 17075 chr11 64486105 . c cAA 3.8 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 39,0,44:2:0:0/1:41 | |
| 17076 chr11 64493374 . C CGGA 7.35 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 17077 chr11 64496587 . T C 46.3 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=48 PL:DP:SP:GT:GQ 79,15,0:5:0:1/1:75 | |
| 17078 chr11 64497161 . C T 19.8 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=45 PL:DP:SP:GT:GQ 51,6,0:2:0:1/1:49 | |
| 17079 chr11 64503496 . A G 11.1 . DP=9;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 42,6,0:2:0:1/1:49 | |
| 17080 chr11 64516547 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 17081 chr11 64516554 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 17082 chr11 64523067 . TGGC T 5.08 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,1,1,0.44 PL:DP:SP:GT:GQ 41,0,53:3:0:0/1:44 | |
| 17083 chr11 64536866 . T C 18.1 . DP=44;AF1=0.5;CI95=0.5,0.5;DP4=12,6,5,2;MQ=50;PV4=1,9.6e-08,0.0012,1 PL:DP:SP:GT:GQ 48,0,255:25:0:0/1:51 | |
| 17084 chr11 64538310 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17085 chr11 64541651 . A AGG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17086 chr11 64549270 . T G 14.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 17087 chr11 64567692 . G C 10.4 . DP=8;AF1=0.5;CI95=0.5,0.5;DP4=1,2,1,1;MQ=47;PV4=1,0.21,0.0091,1 PL:DP:SP:GT:GQ 40,0,90:5:0:0/1:43 | |
| 17088 chr11 64572557 . A G 99 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=4,7,6,4;MQ=48;PV4=0.39,2.2e-05,0.00045,0.44 PL:DP:SP:GT:GQ 161,0,255:21:4:0/1:99 | |
| 17089 chr11 64573910 . C CGCCCG 7.35 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 17090 chr11 64574204 . CA CAGCATTTATA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17091 chr11 64591946 . CA CAGATCAA 6.55 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 43,0,44:2:0:0/1:43 | |
| 17092 chr11 64594143 . T A 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17093 chr11 64594490 . A G 11.4 . DP=20;AF1=0.5101;CI95=0.5,0.5;DP4=0,1,2,1;MQ=50;PV4=1,0.093,0.33,1 PL:DP:SP:GT:GQ 41,0,14:4:0:0/1:17 | |
| 17094 chr11 64595931 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 17095 chr11 64598944 . A G 65.4 . DP=21;AF1=1;CI95=0.5,1;DP4=1,0,7,1;MQ=49;PV4=1,1,0.2,1 PL:DP:SP:GT:GQ 98,13,0:9:0:1/1:65 | |
| 17096 chr11 64603612 . CCT CCTTTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17097 chr11 64606470 . G A 3.54 . DP=4;AF1=0.4998;CI95=0.5,0.5;DP4=3,0,1,0;MQ=48;PV4=1,0.019,0,1 PL:DP:SP:GT:GQ 31,0,114:4:0:0/1:34 | |
| 17098 chr11 64606910 . CCT CCTGCTCCCACT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 17099 chr11 64608172 . GCCCCCC GCCCCC 3.8 . INDEL;DP=22;AF1=0.5;CI95=0.5,0.5;DP4=0,8,0,7;MQ=50;PV4=1,1.4e-07,1,1 PL:DP:SP:GT:GQ 39,0,44:15:0:0/1:41 | |
| 17100 chr11 64612518 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17101 chr11 64622018 . G A 99 . DP=41;AF1=0.5;CI95=0.5,0.5;DP4=8,5,9,15;MQ=49;PV4=0.19,1.1e-10,0.029,1 PL:DP:SP:GT:GQ 194,0,255:37:7:0/1:99 | |
| 17102 chr11 64622419 . T G 32 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=45 PL:DP:SP:GT:GQ 64,9,0:3:0:1/1:63 | |
| 17103 chr11 64624999 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 17104 chr11 64640959 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 17105 chr11 64643717 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17106 chr11 64645656 . GT GTCACT 7.62 . INDEL;DP=4;AF1=0.543;CI95=0.5,1;DP4=0,1,1,0;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,8:2:0:0/1:11 | |
| 17107 chr11 64656292 . C A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 17108 chr11 64676208 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17109 chr11 64676762 . G A 4.13 . DP=6;AF1=0.4998;CI95=0.5,0.5;DP4=4,0,2,0;MQ=49;PV4=1,0.0091,0.089,0.45 PL:DP:SP:GT:GQ 32,0,129:6:0:0/1:35 | |
| 17110 chr11 64684570 . T G 31 . DP=30;AF1=0.5;CI95=0.5,0.5;DP4=8,5,0,7;MQ=49;PV4=0.015,0.049,0.0077,1 PL:DP:SP:GT:GQ 61,0,231:20:18:0/1:64 | |
| 17111 chr11 64693868 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17112 chr11 64702200 . C T 93 . DP=11;AF1=1;CI95=1,1;DP4=0,0,9,0;MQ=46 PL:DP:SP:GT:GQ 126,27,0:9:0:1/1:99 | |
| 17113 chr11 64702457 . CCT CCTGACTCT 3.25 . INDEL;DP=10;AF1=0.5;CI95=0.5,0.5;DP4=2,1,0,1;MQ=50;PV4=1,1,1,0.4 PL:DP:SP:GT:GQ 38,0,114:4:0:0/1:41 | |
| 17114 chr11 64708025 . T C 8.79 . DP=14;AF1=0.5206;CI95=0.5,1;DP4=0,1,2,0;MQ=46;PV4=0.33,1,0.27,1 PL:DP:SP:GT:GQ 38,0,11:3:0:0/1:14 | |
| 17115 chr11 64729553 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 17116 chr11 64757504 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 17117 chr11 64799727 . C A 3.01 . DP=15;AF1=0.4997;CI95=0.5,0.5;DP4=1,3,0,2;MQ=49;PV4=1,0.4,0.01,1 PL:DP:SP:GT:GQ 30,0,82:6:0:0/1:33 | |
| 17118 chr11 64799891 . T C 54 . DP=27;AF1=0.5;CI95=0.5,0.5;DP4=12,1,4,3;MQ=49;PV4=0.1,7.7e-05,0.0045,1 PL:DP:SP:GT:GQ 84,0,247:20:10:0/1:87 | |
| 17119 chr11 64806270 . C T 16.1 . DP=6;AF1=0.5;CI95=0.5,0.5;DP4=1,2,0,2;MQ=48;PV4=1,0.29,0.086,1 PL:DP:SP:GT:GQ 46,0,104:5:0:0/1:49 | |
| 17120 chr11 64812407 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 17121 chr11 64839389 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17122 chr11 64846928 . G GTACGTCACAGACA 99 . INDEL;DP=27;AF1=1;CI95=1,1;DP4=0,0,7,11;MQ=50 PL:DP:SP:GT:GQ 216,54,0:18:0:1/1:99 | |
| 17123 chr11 64857161 . G A 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,39:2:0:0/1:34 | |
| 17124 chr11 64861386 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17125 chr11 64880858 . T C 4.13 . DP=27;AF1=0.4998;CI95=0.5,0.5;DP4=3,8,0,6;MQ=50;PV4=0.51,0.042,0.021,0.43 PL:DP:SP:GT:GQ 32,0,196:17:3:0/1:35 | |
| 17126 chr11 64884052 . G A 52.5 . DP=9;AF1=1;CI95=0.5,1;DP4=0,0,3,1;MQ=48 PL:DP:SP:GT:GQ 85,12,0:4:0:1/1:72 | |
| 17127 chr11 64884116 . C T 20 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,2,1;MQ=47 PL:DP:SP:GT:GQ 52,9,0:3:0:1/1:63 | |
| 17128 chr11 64884520 . C CT 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 17129 chr11 64888116 . G C 21.1 . DP=19;AF1=0.502;CI95=0.5,0.5;DP4=2,0,4,0;MQ=49;PV4=1,1,1,0.11 PL:DP:SP:GT:GQ 51,0,21:6:0:0/1:24 | |
| 17130 chr11 64898357 . GCC GCCC 99 . INDEL;DP=10;AF1=1;CI95=1,1;DP4=0,0,10,0;MQ=50 PL:DP:SP:GT:GQ 166,30,0:10:0:1/1:99 | |
| 17131 chr11 64914634 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 17132 chr11 64918482 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17133 chr11 64921047 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 17134 chr11 64922538 . t tCTCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17135 chr11 64953177 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17136 chr11 64966988 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 17137 chr11 64982974 . t tAGCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17138 chr11 64991053 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 17139 chr11 65001679 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 17140 chr11 65009593 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 17141 chr11 65039467 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 17142 chr11 65047884 . t tCTCTCTTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17143 chr11 65063287 . G T 6.2 . DP=22;AF1=0.4999;CI95=0.5,0.5;DP4=4,1,3,1;MQ=47;PV4=1,0.3,0.15,0.26 PL:DP:SP:GT:GQ 35,0,72:9:0:0/1:38 | |
| 17144 chr11 65063553 . A T 76 . DP=41;AF1=0.5;CI95=0.5,0.5;DP4=0,20,0,16;MQ=48;PV4=1,3.1e-10,1e-07,1 PL:DP:SP:GT:GQ 106,0,240:36:0:0/1:99 | |
| 17145 chr11 65068042 . ttttgtttgtttgtttttttgtttgttt ttttgtttgtttttttgtttgttt 12.7 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17146 chr11 65073755 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 17147 chr11 65081301 . C A 6.98 . DP=2;AF1=0.5001;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,33:2:0:0/1:34 | |
| 17148 chr11 65088028 . G C 3.55 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17149 chr11 65127536 . g gAGCGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17150 chr11 65135478 . a aTTGT 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17151 chr11 65142265 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 17152 chr11 65144075 . T C 99 . DP=45;AF1=1;CI95=1,1;DP4=0,1,4,34;MQ=48;PV4=1,1,0.17,1 PL:DP:SP:GT:GQ 234,99,0:39:0:1/1:99 | |
| 17153 chr11 65146069 . T TCAAAAAGA 7.35 . INDEL;DP=2;AF1=0.5001;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,32:2:0:0/1:35 | |
| 17154 chr11 65147685 . T A 16.1 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=1,6,0,5;MQ=48;PV4=1,0.13,0.046,0.3 PL:DP:SP:GT:GQ 46,0,133:12:0:0/1:49 | |
| 17155 chr11 65149576 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17156 chr11 65154544 . CC CCAGCAC 12.7 . INDEL;DP=6;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17157 chr11 65178620 . G A 72 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=43 PL:DP:SP:GT:GQ 104,9,0:3:0:1/1:63 | |
| 17158 chr11 65186083 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 17159 chr11 65189609 . GC GCTCTC 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 17160 chr11 65208444 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 17161 chr11 65210080 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17162 chr11 65214224 . CC CCGC 3.32 . INDEL;DP=2;AF1=0.5163;CI95=0.5,0.5;DP4=1,0,0,1;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,12:2:0:0/1:15 | |
| 17163 chr11 65215259 . A T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 17164 chr11 65242737 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 17165 chr11 65246381 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17166 chr11 65263763 . A AGAAGC 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 17167 chr11 65310518 . C G 39 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=6,1,3,1;MQ=48;PV4=1,0.074,0.034,1 PL:DP:SP:GT:GQ 69,0,173:11:0:0/1:72 | |
| 17168 chr11 65315358 . C CCAGGAC 7.69 . INDEL;DP=4;AF1=0.5554;CI95=0.5,1;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,7:2:0:0/1:10 | |
| 17169 chr11 65316054 . C G 3.55 . DP=2;AF1=0.5023;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,20:2:0:0/1:23 | |
| 17170 chr11 65324080 . T C 3.55 . DP=3;AF1=0.5003;CI95=0.5,0.5;DP4=1,0,1,0;MQ=43;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,27:2:0:0/1:29 | |
| 17171 chr11 65347636 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 17172 chr11 65365047 . g gACAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17173 chr11 65372191 . g gGGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17174 chr11 65373133 . GG GGAGAAG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 17175 chr11 65387360 . T TA 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 17176 chr11 65391554 . G GTGTGGCGGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17177 chr11 65401403 . G A 6.2 . DP=3;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,1;MQ=49;PV4=1,0,0,1 PL:DP:SP:GT:GQ 35,0,41:3:0:0/1:37 | |
| 17178 chr11 65410170 . G A 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 17179 chr11 65435036 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 17180 chr11 65470872 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 17181 chr11 65480768 . A G 5.46 . DP=4;AF1=0.4999;CI95=0.5,0.5;DP4=1,1,1,0;MQ=46;PV4=1,1,0.19,1 PL:DP:SP:GT:GQ 34,0,72:3:0:0/1:37 | |
| 17182 chr11 65480791 . A G 64.1 . DP=11;AF1=1;CI95=0.5,1;DP4=0,0,3,3;MQ=49 PL:DP:SP:GT:GQ 97,18,0:6:0:1/1:90 | |
| 17183 chr11 65481166 . T C 43.1 . DP=22;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=49 PL:DP:SP:GT:GQ 76,21,0:7:0:1/1:84 | |
| 17184 chr11 65485858 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 17185 chr11 65494987 . C T 46 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=46 PL:DP:SP:GT:GQ 78,9,0:3:0:1/1:63 | |
| 17186 chr11 65517725 . A G 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17187 chr11 65534736 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 17188 chr11 65563753 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17189 chr11 65569298 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 17190 chr11 65577643 . G A 5.46 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,42:2:0:0/1:36 | |
| 17191 chr11 65596570 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17192 chr11 65598441 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 17193 chr11 65622871 . C T 3.01 . DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,2;MQ=49;PV4=1,0.061,0.33,0.019 PL:DP:SP:GT:GQ 30,0,30:3:0:0/1:30 | |
| 17194 chr11 65628469 . CAC CACAAAC 12.7 . INDEL;DP=4;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17195 chr11 65632814 . TAG TAGAG 10.8 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 17196 chr11 65633453 . G A 68 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=3,2,7,1;MQ=46;PV4=0.51,0.15,0.14,1 PL:DP:SP:GT:GQ 98,0,99:13:3:0/1:98 | |
| 17197 chr11 65634616 . C T 51 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,3;MQ=47;PV4=1,1,0,1 PL:DP:SP:GT:GQ 81,0,76:6:0:0/1:78 | |
| 17198 chr11 65635857 . AG AGATTCG 3.25 . INDEL;DP=16;AF1=0.5;CI95=0.5,0.5;DP4=2,1,1,0;MQ=50;PV4=1,1,1,0.45 PL:DP:SP:GT:GQ 38,0,84:4:0:0/1:41 | |
| 17199 chr11 65636053 . T C 99 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=9,4,8,2;MQ=48;PV4=0.66,0.18,0.00041,1 PL:DP:SP:GT:GQ 148,0,242:23:2:0/1:99 | |
| 17200 chr11 65637425 . CCC CCCAACC 5.08 . INDEL;DP=6;AF1=0.5;CI95=0.5,0.5;DP4=2,0,0,1;MQ=50;PV4=0.33,1,1,1 PL:DP:SP:GT:GQ 41,0,74:3:0:0/1:44 | |
| 17201 chr11 65637984 . C G 76 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=6,1,4,4;MQ=48;PV4=0.28,0.043,0.17,1 PL:DP:SP:GT:GQ 106,0,145:15:5:0/1:99 | |
| 17202 chr11 65640989 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 17203 chr11 65643906 . T C 6.02 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=50 PL:DP:SP:GT:GQ 36,6,0:2:0:1/1:49 | |
| 17204 chr11 65651222 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17205 chr11 65655393 . G C 69.1 . DP=6;AF1=0.9966;CI95=0.5,1;DP4=0,1,5,0;MQ=45;PV4=0.17,1,0.13,1 PL:DP:SP:GT:GQ 98,1,0:6:0:1/1:23 | |
| 17206 chr11 65661393 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17207 chr11 65675742 . tctta t 3.8 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 39,0,44:2:0:0/1:41 | |
| 17208 chr11 65684611 . GGG GGGAGG 7.37 . INDEL;DP=2;AF1=0.5032;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,19:2:0:0/1:22 | |
| 17209 chr11 65702523 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 17210 chr11 65706984 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17211 chr11 65711780 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 17212 chr11 65726022 . G GACCCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17213 chr11 65732651 . G A 5.76 . DP=7;AF1=0.5553;CI95=0.5,1;DP4=0,1,0,2;MQ=47;PV4=1,1,1,0.45 PL:DP:SP:GT:GQ 34,0,7:3:0:0/1:10 | |
| 17214 chr11 65744421 . C T 14.1 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=50 PL:DP:SP:GT:GQ 46,9,0:3:0:1/1:63 | |
| 17215 chr11 65747028 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17216 chr11 65754095 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 17217 chr11 65757359 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 17218 chr11 65765551 . C T 11.1 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 42,6,0:2:0:1/1:49 | |
| 17219 chr11 65766553 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 17220 chr11 65767153 . A G 75.1 . DP=16;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=47 PL:DP:SP:GT:GQ 108,21,0:7:0:1/1:84 | |
| 17221 chr11 65767578 . G A 57 . DP=47;AF1=0.5;CI95=0.5,0.5;DP4=10,19,8,5;MQ=49;PV4=0.18,1.1e-05,0.015,1 PL:DP:SP:GT:GQ 87,0,255:42:8:0/1:90 | |
| 17222 chr11 65770658 . A G 13 . DP=10;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=49 PL:DP:SP:GT:GQ 44,6,0:2:0:1/1:49 | |
| 17223 chr11 65771050 . TCACTGAGCACTGAGCA TCACTGAGCA 99 . INDEL;DP=13;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=50 PL:DP:SP:GT:GQ 172,15,0:5:0:1/1:75 | |
| 17224 chr11 65771060 . CTGAGCAG C 45.5 . INDEL;DP=12;AF1=0.5;CI95=0.5,0.5;DP4=4,1,4,0;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 83,0,116:9:0:0/1:86 | |
| 17225 chr11 65771203 . G GGACACCTACC 7.35 . INDEL;DP=9;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 17226 chr11 65773138 . A C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 17227 chr11 65773247 . t tG 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 17228 chr11 65775890 . G GGAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17229 chr11 65776481 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 17230 chr11 65784806 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17231 chr11 65788072 . C T 99 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,2,3;MQ=45 PL:DP:SP:GT:GQ 139,15,0:5:0:1/1:75 | |
| 17232 chr11 65790527 . G T 15.1 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,3;MQ=49;PV4=1,0.14,0.07,1 PL:DP:SP:GT:GQ 45,0,73:6:0:0/1:48 | |
| 17233 chr11 65801803 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 17234 chr11 65804695 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 17235 chr11 65822526 . A C 7.8 . DP=23;AF1=0.5;CI95=0.5,0.5;DP4=6,2,4,2;MQ=48;PV4=1,0.0077,0.34,0.15 PL:DP:SP:GT:GQ 37,0,190:14:0:0/1:40 | |
| 17236 chr11 65824507 . T A 7.89 . DP=6;AF1=0.5128;CI95=0.5,0.5;DP4=0,1,0,2;MQ=48;PV4=1,1,0.26,1 PL:DP:SP:GT:GQ 37,0,13:3:0:0/1:16 | |
| 17237 chr11 65851500 . t tTGGA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 17238 chr11 65856869 . G C 10.4 . DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,1,2,0;MQ=48;PV4=0.33,0.063,0.2,0.039 PL:DP:SP:GT:GQ 40,0,39:3:0:0/1:39 | |
| 17239 chr11 65858211 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17240 chr11 65864804 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 17241 chr11 65881104 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17242 chr11 65919220 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 17243 chr11 65920117 . C T 6.98 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,44:2:0:0/1:38 | |
| 17244 chr11 65923798 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 17245 chr11 65948517 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17246 chr11 65983522 . A G 99 . DP=18;AF1=1;CI95=1,1;DP4=0,0,15,0;MQ=46 PL:DP:SP:GT:GQ 143,45,0:15:0:1/1:99 | |
| 17247 chr11 66001418 . C T 37 . DP=4;AF1=0.5;CI95=0.5,0.5;DP4=1,1,0,2;MQ=47;PV4=1,0.0014,0,1 PL:DP:SP:GT:GQ 67,0,88:4:0:0/1:70 | |
| 17248 chr11 66010573 . C T 10.5 . DP=7;AF1=0.5101;CI95=0.5,0.5;DP4=0,1,0,3;MQ=49;PV4=1,0.071,0.21,1 PL:DP:SP:GT:GQ 40,0,14:4:0:0/1:17 | |
| 17249 chr11 66015758 . T G 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 17250 chr11 66016181 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17251 chr11 66027886 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17252 chr11 66029607 . ACGTCC AC 3.25 . INDEL;DP=11;AF1=0.5;CI95=0.5,0.5;DP4=2,1,0,1;MQ=49;PV4=1,0.48,1,1 PL:DP:SP:GT:GQ 38,0,90:4:0:0/1:41 | |
| 17253 chr11 66036405 . C G 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17254 chr11 66043670 . C G 7.8 . DP=5;AF1=0.5;CI95=0.5,0.5;DP4=1,2,0,2;MQ=48;PV4=1,0.17,0.14,0.14 PL:DP:SP:GT:GQ 37,0,105:5:0:0/1:40 | |
| 17255 chr11 66043742 . CCTTCT CCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17256 chr11 66083129 . T C 24 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=1,2,0,4;MQ=49;PV4=0.43,5.3e-05,0.014,1 PL:DP:SP:GT:GQ 54,0,121:7:0:0/1:57 | |
| 17257 chr11 66084153 . TG TGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17258 chr11 66093829 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17259 chr11 66096858 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 17260 chr11 66100152 . T C 19 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=49 PL:DP:SP:GT:GQ 51,9,0:3:0:1/1:63 | |
| 17261 chr11 66100569 . C T 6.02 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 36,6,0:2:0:1/1:49 | |
| 17262 chr11 66105338 . C G 19.1 . DP=10;AF1=0.5;CI95=0.5,0.5;DP4=0,2,3,0;MQ=48;PV4=0.1,0.0057,0.11,1 PL:DP:SP:GT:GQ 49,0,77:5:10:0/1:52 | |
| 17263 chr11 66107674 . A G 99 . DP=25;AF1=1;CI95=1,1;DP4=0,1,2,17;MQ=44;PV4=1,1,0.018,0.035 PL:DP:SP:GT:GQ 255,42,0:20:0:1/1:99 | |
| 17264 chr11 66108255 . G A 3.54 . DP=10;AF1=0.4998;CI95=0.5,0.5;DP4=3,0,3,0;MQ=50;PV4=1,0.013,0.19,0.14 PL:DP:SP:GT:GQ 31,0,93:6:0:0/1:34 | |
| 17265 chr11 66109166 . c cGAGATGCAG 3.25 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=0,3,1,0;MQ=50;PV4=0.25,1,1,0.31 PL:DP:SP:GT:GQ 38,0,114:4:0:0/1:41 | |
| 17266 chr11 66119552 . tt tTCCGCt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17267 chr11 66133797 . T A 5.46 . DP=2;AF1=0.5001;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,32:2:0:0/1:33 | |
| 17268 chr11 66136472 . T C 4.77 . DP=3;AF1=0.4999;CI95=0.5,0.5;DP4=2,0,1,0;MQ=48;PV4=1,1,0,1 PL:DP:SP:GT:GQ 33,0,58:3:0:0/1:36 | |
| 17269 chr11 66142237 . t tCAGACGC 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 17270 chr11 66167975 . gatc g 6.56 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 17271 chr11 66176032 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 17272 chr11 66179247 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 17273 chr11 66191541 . T A 99 . DP=30;AF1=0.5;CI95=0.5,0.5;DP4=11,5,8,4;MQ=49;PV4=1,3.4e-12,0.00033,0.27 PL:DP:SP:GT:GQ 133,0,255:28:0:0/1:99 | |
| 17274 chr11 66193299 . A T 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 17275 chr11 66215218 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17276 chr11 66240882 . T C 99 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=0,7,5,4;MQ=48;PV4=0.034,0.0031,2.8e-05,1 PL:DP:SP:GT:GQ 157,0,157:16:15:0/1:99 | |
| 17277 chr11 66241361 . CG CGTG 7.35 . INDEL;DP=9;AF1=0.5003;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,29:2:0:0/1:32 | |
| 17278 chr11 66249898 . G A 72 . DP=34;AF1=0.5;CI95=0.5,0.5;DP4=11,7,13,1;MQ=49;PV4=0.053,8.2e-10,0.032,1 PL:DP:SP:GT:GQ 102,0,255:32:13:0/1:99 | |
| 17279 chr11 66264970 . G A 9.52 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=1,7,0,4;MQ=49;PV4=1,0.0029,0.015,1 PL:DP:SP:GT:GQ 39,0,211:12:0:0/1:42 | |
| 17280 chr11 66272142 . A G 99 . DP=40;AF1=1;CI95=1,1;DP4=1,0,4,9;MQ=49;PV4=0.36,0.37,0.23,1 PL:DP:SP:GT:GQ 135,21,0:14:0:1/1:84 | |
| 17281 chr11 66272282 . A AGGGC,AC 5.95 . INDEL;DP=14;AF1=0.5263;CI95=0.5,1;DP4=0,1,0,2;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,2,32,12,0,42:3:0:0/1:13 | |
| 17282 chr11 66276537 . A G 99 . DP=26;AF1=0.5;CI95=0.5,0.5;DP4=10,4,10,0;MQ=47;PV4=0.11,0.42,0,1 PL:DP:SP:GT:GQ 169,0,255:24:9:0/1:99 | |
| 17283 chr11 66280851 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 17284 chr11 66285308 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 17285 chr11 66288733 . G C 99 . DP=29;AF1=0.5;CI95=0.5,0.5;DP4=11,0,14,2;MQ=49;PV4=0.5,5.3e-08,0.0011,1 PL:DP:SP:GT:GQ 130,0,198:27:3:0/1:99 | |
| 17286 chr11 66293779 . T C 3.54 . DP=6;AF1=0.4998;CI95=0.5,0.5;DP4=0,3,0,1;MQ=48;PV4=1,0.5,0,1 PL:DP:SP:GT:GQ 31,0,93:4:0:0/1:34 | |
| 17287 chr11 66294043 . ATTGTTTG ATTG 10.8 . INDEL;DP=11;AF1=0.5;CI95=0.5,0.5;DP4=8,0,2,0;MQ=50;PV4=1,0.12,1,1 PL:DP:SP:GT:GQ 48,0,198:10:0:0/1:51 | |
| 17288 chr11 66297299 . G A 13.2 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=2,6,2,1;MQ=49;PV4=0.49,0.0083,4.7e-09,0.38 PL:DP:SP:GT:GQ 43,0,245:11:3:0/1:46 | |
| 17289 chr11 66299502 . C A 6.02 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=46 PL:DP:SP:GT:GQ 36,6,0:2:0:1/1:49 | |
| 17290 chr11 66300292 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 17291 chr11 66315469 . GTGGC G 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 17292 chr11 66325877 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17293 chr11 66326605 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17294 chr11 66328036 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 17295 chr11 66331458 . A G 14.1 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=50 PL:DP:SP:GT:GQ 46,9,0:3:0:1/1:63 | |
| 17296 chr11 66333598 . C T 81 . DP=50;AF1=0.504;CI95=0.5,0.5;DP4=1,1,3,7;MQ=49;PV4=1,0.027,0.068,1 PL:DP:SP:GT:GQ 111,0,18:12:0:0/1:21 | |
| 17297 chr11 66336427 . cctg c 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 17298 chr11 66354360 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 17299 chr11 66359427 . C A 11.3 . DP=40;AF1=0.5;CI95=0.5,0.5;DP4=10,5,0,6;MQ=49;PV4=0.012,0.027,1.7e-05,0.4 PL:DP:SP:GT:GQ 41,0,255:21:19:0/1:44 | |
| 17300 chr11 66360503 . A AGGC 7.39 . INDEL;DP=2;AF1=0.5063;CI95=0.5,0.5;DP4=0,1,0,1;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,16:2:0:0/1:19 | |
| 17301 chr11 66362439 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 17302 chr11 66373582 . TG TGTGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17303 chr11 66384251 . C G 21 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=1,2,0,5;MQ=48;PV4=0.37,1,0.0077,1 PL:DP:SP:GT:GQ 51,0,44:8:0:0/1:46 | |
| 17304 chr11 66384256 . T G 5.46 . DP=16;AF1=0.4999;CI95=0.5,0.5;DP4=1,3,0,4;MQ=49;PV4=1,0.24,0.047,1 PL:DP:SP:GT:GQ 34,0,61:8:0:0/1:37 | |
| 17305 chr11 66386735 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 17306 chr11 66395172 . GG GGCCGGCGTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17307 chr11 66402077 . ctt c 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 17308 chr11 66407209 . G T 6.2 . DP=5;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,1;MQ=49;PV4=1,0.061,0.33,0.18 PL:DP:SP:GT:GQ 35,0,41:3:0:0/1:37 | |
| 17309 chr11 66411380 . c cTCACA 3.81 . INDEL;DP=5;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 17310 chr11 66417647 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 17311 chr11 66432388 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17312 chr11 66435988 . T A 4.13 . DP=4;AF1=0.4998;CI95=0.5,0.5;DP4=2,0,2,0;MQ=49;PV4=1,0.013,0,1 PL:DP:SP:GT:GQ 32,0,80:4:0:0/1:35 | |
| 17313 chr11 66438921 . G C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 17314 chr11 66440473 . AA AAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17315 chr11 66443593 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 17316 chr11 66448845 . cccact c 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 17317 chr11 66455916 . GG GGAG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 17318 chr11 66456217 . G A 39 . DP=44;AF1=0.5;CI95=0.5,0.5;DP4=15,21,2,3;MQ=49;PV4=1,0.4,0,1 PL:DP:SP:GT:GQ 69,0,255:41:0:0/1:72 | |
| 17319 chr11 66456386 . ATG ATGTG 7.57 . INDEL;DP=10;AF1=0.5336;CI95=0.5,1;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,9:2:0:0/1:12 | |
| 17320 chr11 66460039 . GG GGTCTTG 3.25 . INDEL;DP=8;AF1=0.5;CI95=0.5,0.5;DP4=1,2,0,1;MQ=50;PV4=1,1,1,0.11 PL:DP:SP:GT:GQ 38,0,119:4:0:0/1:41 | |
| 17321 chr11 66460527 . C T 3.54 . DP=8;AF1=0.4998;CI95=0.5,0.5;DP4=4,0,2,0;MQ=49;PV4=1,0.24,0.049,1 PL:DP:SP:GT:GQ 31,0,98:6:0:0/1:34 | |
| 17322 chr11 66462455 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 17323 chr11 66467383 . t tCTACTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17324 chr11 66469148 . A G 5.2 . DP=9;AF1=0.5938;CI95=0.5,1;DP4=0,1,0,2;MQ=47;PV4=1,1,0.17,0.17 PL:DP:SP:GT:GQ 33,0,5:3:0:0/1:7 | |
| 17325 chr11 66478108 . CCC CCCGCC 3.25 . INDEL;DP=9;AF1=0.5;CI95=0.5,0.5;DP4=3,0,0,1;MQ=50;PV4=0.25,1,1,1 PL:DP:SP:GT:GQ 38,0,71:4:0:0/1:41 | |
| 17326 chr11 66481264 . C T 13 . DP=9;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 44,6,0:2:0:1/1:49 | |
| 17327 chr11 66481772 . C A 26 . DP=21;AF1=0.5;CI95=0.5,0.5;DP4=6,0,4,0;MQ=48;PV4=1,1,0.00013,1 PL:DP:SP:GT:GQ 56,0,85:10:0:0/1:59 | |
| 17328 chr11 66490420 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17329 chr11 66494445 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 17330 chr11 66503473 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 17331 chr11 66505778 . GG GGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17332 chr11 66507560 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17333 chr11 66509274 . G GCTGCGGAA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 17334 chr11 66519688 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17335 chr11 66524187 . AAAt A 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 17336 chr11 66524236 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 17337 chr11 66529037 . C G 4.77 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 17338 chr11 66535667 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17339 chr11 66539236 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 17340 chr11 66546523 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17341 chr11 66557058 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 17342 chr11 66574307 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 17343 chr11 66582821 . T G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 17344 chr11 66589803 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17345 chr11 66613395 . C T 99 . DP=56;AF1=0.5;CI95=0.5,0.5;DP4=11,14,14,14;MQ=49;PV4=0.78,1.8e-21,0.0089,1 PL:DP:SP:GT:GQ 161,0,255:53:1:0/1:99 | |
| 17346 chr11 66617286 . G A 17.1 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=1,6,3,1;MQ=49;PV4=0.088,0.023,0.054,0.46 PL:DP:SP:GT:GQ 47,0,175:11:11:0/1:50 | |
| 17347 chr11 66623500 . CCT CCTCT 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17348 chr11 66631694 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 17349 chr11 66644084 . CCT C 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 17350 chr11 66653795 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 17351 chr11 66662523 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 17352 chr11 66685356 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 17353 chr11 66717608 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17354 chr11 66726355 . G GAACGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17355 chr11 66742398 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 17356 chr11 66742661 . T TGGTGTGCGTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17357 chr11 66755154 . C G 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,41:2:0:0/1:33 | |
| 17358 chr11 66759788 . at aTTCGTTt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17359 chr11 66794329 . CC CCTCTCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17360 chr11 66811691 . T G 6.98 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,44:2:0:0/1:38 | |
| 17361 chr11 66821790 . C A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 17362 chr11 66833471 . G C 16.5 . DP=11;AF1=0.5554;CI95=0.5,1;DP4=0,1,0,4;MQ=48;PV4=1,0.34,0.34,1 PL:DP:SP:GT:GQ 46,0,7:5:0:0/1:10 | |
| 17363 chr11 66834252 . C T 99 . DP=46;AF1=0.5;CI95=0.5,0.5;DP4=10,13,13,5;MQ=48;PV4=0.11,1.5e-10,6e-09,0.15 PL:DP:SP:GT:GQ 190,0,255:41:9:0/1:99 | |
| 17364 chr11 66837965 . T C 99 . DP=16;AF1=1;CI95=1,1;DP4=0,0,9,7;MQ=49 PL:DP:SP:GT:GQ 181,48,0:16:0:1/1:99 | |
| 17365 chr11 66838343 . TCT TCTCCCT 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=2,0,0,1;MQ=50;PV4=0.33,1,1,0.19 PL:DP:SP:GT:GQ 41,0,62:3:0:0/1:44 | |
| 17366 chr11 66865966 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 17367 chr11 66873681 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 17368 chr11 66919560 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17369 chr11 66925644 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17370 chr11 66932051 . G T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 17371 chr11 66973383 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 17372 chr11 66974607 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 17373 chr11 66989352 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17374 chr11 66996229 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 17375 chr11 67013278 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 17376 chr11 67023060 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17377 chr11 67044555 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 17378 chr11 67055482 . T C 5.46 . DP=3;AF1=0.4999;CI95=0.5,0.5;DP4=0,2,0,1;MQ=47;PV4=1,0.47,0.042,1 PL:DP:SP:GT:GQ 34,0,71:3:0:0/1:37 | |
| 17379 chr11 67059255 . TT TTCT 7.49 . INDEL;DP=8;AF1=0.5207;CI95=0.5,1;DP4=0,1,0,1;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,11:2:0:0/1:14 | |
| 17380 chr11 67059256 . T TTGGGGAG 5.08 . INDEL;DP=8;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,1,1,0.33 PL:DP:SP:GT:GQ 41,0,55:3:0:0/1:44 | |
| 17381 chr11 67066324 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 17382 chr11 67068859 . T C 3.54 . DP=18;AF1=0.4998;CI95=0.5,0.5;DP4=3,4,1,3;MQ=50;PV4=1,0.00053,0.1,0.31 PL:DP:SP:GT:GQ 31,0,233:11:0:0/1:34 | |
| 17383 chr11 67074433 . G GTA 5.08 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,1,1,0.33 PL:DP:SP:GT:GQ 41,0,74:3:0:0/1:44 | |
| 17384 chr11 67075131 . C T 5.46 . DP=17;AF1=0.4999;CI95=0.5,0.5;DP4=4,4,1,2;MQ=49;PV4=1,0.019,0.0058,1 PL:DP:SP:GT:GQ 34,0,237:11:0:0/1:37 | |
| 17385 chr11 67089402 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17386 chr11 67092516 . A AGCATAGACACG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17387 chr11 67125657 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17388 chr11 67125666 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17389 chr11 67136294 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 17390 chr11 67143524 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17391 chr11 67160068 . G T 6.98 . DP=14;AF1=0.4999;CI95=0.5,0.5;DP4=3,2,3,0;MQ=48;PV4=0.46,0.051,0.023,1 PL:DP:SP:GT:GQ 36,0,131:8:3:0/1:39 | |
| 17392 chr11 67160961 . A G 94 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=11,0,9,0;MQ=48;PV4=1,0.00022,4.9e-07,1 PL:DP:SP:GT:GQ 124,0,211:20:0:0/1:99 | |
| 17393 chr11 67168049 . g gTC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 17394 chr11 67174597 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17395 chr11 67177279 . G A 6.79 . DP=10;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 37,6,0:2:0:1/1:49 | |
| 17396 chr11 67177289 . T C 3.64 . DP=8;AF1=0.5205;CI95=0.5,0.5;DP4=0,1,0,3;MQ=46;PV4=1,1,0.12,1 PL:DP:SP:GT:GQ 31,0,11:4:0:0/1:14 | |
| 17397 chr11 67178658 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17398 chr11 67185363 . CA CAAA 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 17399 chr11 67196544 . C G 91 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=3,0,3,2;MQ=46;PV4=0.46,0.023,0.00036,0.027 PL:DP:SP:GT:GQ 121,0,90:8:3:0/1:93 | |
| 17400 chr11 67196606 . T A 3.57 . DP=7;AF1=0.5048;CI95=0.5,0.5;DP4=0,1,0,2;MQ=49;PV4=1,0.061,0,0.22 PL:DP:SP:GT:GQ 31,0,17:3:0:0/1:20 | |
| 17401 chr11 67202044 . G A 99 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,4,2;MQ=46 PL:DP:SP:GT:GQ 134,18,0:6:0:1/1:90 | |
| 17402 chr11 67202156 . C T,A 25.5 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=49 PL:DP:SP:GT:GQ 61,15,53,3,0,53:5:0:1/1:72 | |
| 17403 chr11 67205422 . G A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 17404 chr11 67205459 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17405 chr11 67210323 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 17406 chr11 67213868 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17407 chr11 67219002 . T C 33 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=0,6,0,6;MQ=49;PV4=1,1.4e-06,0.17,0.31 PL:DP:SP:GT:GQ 63,0,170:12:0:0/1:66 | |
| 17408 chr11 67219247 . G C 3.01 . DP=6;AF1=0.4997;CI95=0.5,0.5;DP4=0,4,0,2;MQ=49;PV4=1,0.072,0.089,1 PL:DP:SP:GT:GQ 30,0,123:6:0:0/1:33 | |
| 17409 chr11 67227058 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17410 chr11 67228863 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 17411 chr11 67234483 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 17412 chr11 67254464 . A C 32 . DP=28;AF1=0.5;CI95=0.5,0.5;DP4=2,6,6,0;MQ=49;PV4=0.0097,0.005,0.0033,1 PL:DP:SP:GT:GQ 62,0,163:14:20:0/1:65 | |
| 17413 chr11 67255170 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 17414 chr11 67261489 . C CGGGG 3.25 . INDEL;DP=11;AF1=0.5;CI95=0.5,0.5;DP4=0,3,1,0;MQ=49;PV4=0.25,1,1,1 PL:DP:SP:GT:GQ 38,0,96:4:0:0/1:41 | |
| 17415 chr11 67261495 . T C 8.64 . DP=13;AF1=0.5;CI95=0.5,0.5;DP4=0,5,1,2;MQ=49;PV4=0.37,0.16,0.053,1 PL:DP:SP:GT:GQ 38,0,73:8:0:0/1:41 | |
| 17416 chr11 67261505 . TGC T 21.5 . INDEL;DP=17;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,2;MQ=49;PV4=1,1,1,0.18 PL:DP:SP:GT:GQ 59,0,80:6:0:0/1:62 | |
| 17417 chr11 67265605 . T A 13.2 . DP=11;AF1=0.5;CI95=0.5,0.5;DP4=3,3,0,2;MQ=48;PV4=0.46,0.29,3.8e-05,0.37 PL:DP:SP:GT:GQ 43,0,176:8:3:0/1:46 | |
| 17418 chr11 67266551 . T A 3.01 . DP=7;AF1=0.4997;CI95=0.5,0.5;DP4=0,3,0,2;MQ=48;PV4=1,0.18,0.039,1 PL:DP:SP:GT:GQ 30,0,66:5:0:0/1:33 | |
| 17419 chr11 67275912 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 17420 chr11 67282348 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 17421 chr11 67335172 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 17422 chr11 67352689 . A G 99 . DP=36;AF1=0.5;CI95=0.5,0.5;DP4=7,9,2,13;MQ=47;PV4=0.11,7.6e-06,2.7e-06,1 PL:DP:SP:GT:GQ 188,0,255:31:9:0/1:99 | |
| 17423 chr11 67355111 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 17424 chr11 67373414 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17425 chr11 67373611 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17426 chr11 67378371 . TC TCGGCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17427 chr11 67382259 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 17428 chr11 67388336 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17429 chr11 67402937 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 17430 chr11 67412935 . C CTAA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17431 chr11 67430762 . T C 9.6 . DP=4;AF1=0.5101;CI95=0.5,0.5;DP4=0,1,2,0;MQ=45;PV4=0.33,1,0.17,1 PL:DP:SP:GT:GQ 39,0,14:3:0:0/1:17 | |
| 17432 chr11 67433077 . CCA CCACA 5.08 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=2,0,0,1;MQ=50;PV4=0.33,1,1,0.32 PL:DP:SP:GT:GQ 41,0,73:3:0:0/1:44 | |
| 17433 chr11 67433708 . CGGGG CGGGGG 7.15 . INDEL;DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=50 PL:DP:SP:GT:GQ 45,6,0:2:0:1/1:49 | |
| 17434 chr11 67436451 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17435 chr11 67436575 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 17436 chr11 67450364 . A G 92 . DP=14;AF1=1;CI95=1,1;DP4=0,0,5,7;MQ=17 PL:DP:SP:GT:GQ 125,36,0:12:0:1/1:99 | |
| 17437 chr11 67471605 . cca cCAAAAca 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17438 chr11 67473997 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17439 chr11 67532736 . G C 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17440 chr11 67554590 . A G 38.5 . DP=11;AF1=0.8277;CI95=0.5,1;DP4=0,1,2,2;MQ=36;PV4=1,1,1,1 PL:DP:SP:GT:GQ 67,0,1:5:0:1/1:5 | |
| 17441 chr11 67554682 . C T 24.1 . DP=8;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=15 PL:DP:SP:GT:GQ 57,21,0:7:0:1/1:84 | |
| 17442 chr11 67559770 . C A 96 . DP=16;AF1=1;CI95=1,1;DP4=0,0,3,8;MQ=39 PL:DP:SP:GT:GQ 129,33,0:11:0:1/1:99 | |
| 17443 chr11 67564197 . T C 76 . DP=10;AF1=1;CI95=1,1;DP4=0,0,0,9;MQ=24 PL:DP:SP:GT:GQ 109,27,0:9:0:1/1:99 | |
| 17444 chr11 67565099 . G A 4.61 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=36 PL:DP:SP:GT:GQ 34,6,0:2:0:1/1:49 | |
| 17445 chr11 67565587 . A G 10.4 . DP=15;AF1=1;CI95=0.5,1;DP4=0,0,2,1;MQ=16 PL:DP:SP:GT:GQ 42,9,0:3:0:1/1:63 | |
| 17446 chr11 67584331 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17447 chr11 67601682 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17448 chr11 67639569 . C G 3.66 . DP=2;AF1=0.5261;CI95=0.5,1;DP4=1,0,0,1;MQ=32;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,10:2:0:0/1:13 | |
| 17449 chr11 67658836 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17450 chr11 67673027 . A G 68.3 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,4,1;MQ=42 PL:DP:SP:GT:GQ 101,15,0:5:0:1/1:75 | |
| 17451 chr11 67700552 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 17452 chr11 67706585 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 17453 chr11 67717653 . G A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 17454 chr11 67728610 . G T 8.44 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 39,6,0:2:0:1/1:49 | |
| 17455 chr11 67730835 . t tTAGAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17456 chr11 67749519 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17457 chr11 67754535 . gcga g 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 17458 chr11 67765163 . AG AGG 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 17459 chr11 67776939 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17460 chr11 67784908 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 17461 chr11 67787520 . C CCAGTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17462 chr11 67799731 . C G 18.1 . DP=39;AF1=0.501;CI95=0.5,0.5;DP4=0,2,4,0;MQ=49;PV4=0.067,0.4,1,1 PL:DP:SP:GT:GQ 48,0,24:6:12:0/1:27 | |
| 17463 chr11 67804100 . A G 33 . DP=10;AF1=0.5;CI95=0.5,0.5;DP4=0,7,0,3;MQ=48;PV4=1,0.13,0.0031,0.21 PL:DP:SP:GT:GQ 63,0,169:10:0:0/1:66 | |
| 17464 chr11 67814979 . G C 99 . DP=18;AF1=1;CI95=1,1;DP4=0,1,0,17;MQ=48;PV4=1,1,0.22,1 PL:DP:SP:GT:GQ 144,34,0:18:0:1/1:99 | |
| 17465 chr11 67842362 . A G 5.46 . DP=10;AF1=0.4999;CI95=0.5,0.5;DP4=0,8,0,2;MQ=49;PV4=1,0.031,2.4e-09,1 PL:DP:SP:GT:GQ 34,0,191:10:0:0/1:37 | |
| 17466 chr11 67842369 . C T 48.1 . DP=8;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=49 PL:DP:SP:GT:GQ 81,21,0:7:0:1/1:84 | |
| 17467 chr11 67844930 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 17468 chr11 67869879 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17469 chr11 67877358 . g gGTGGTT 7.35 . INDEL;DP=2;AF1=0.5006;CI95=0.5,0.5;DP4=0,1,1,0;MQ=42;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,26:2:0:0/1:29 | |
| 17470 chr11 67884399 . C CCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17471 chr11 67930510 . TA TAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17472 chr11 67931320 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 17473 chr11 67931446 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17474 chr11 67938943 . CAAGGCCA C 7.35 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 17475 chr11 67947573 . C CGCTCTTAA 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,0.47,1,1 PL:DP:SP:GT:GQ 41,0,53:3:0:0/1:44 | |
| 17476 chr11 67957518 . A T 50.3 . DP=47;AF1=1;CI95=0.5,1;DP4=0,0,3,2;MQ=50 PL:DP:SP:GT:GQ 83,15,0:5:0:1/1:75 | |
| 17477 chr11 67960826 . G T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 17478 chr11 67965868 . aa aACa 4.42 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 17479 chr11 67983663 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17480 chr11 67998420 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17481 chr11 68009566 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17482 chr11 68023199 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17483 chr11 68030015 . C T 99 . DP=13;AF1=1;CI95=1,1;DP4=0,0,3,5;MQ=46 PL:DP:SP:GT:GQ 176,24,0:8:0:1/1:96 | |
| 17484 chr11 68050719 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 17485 chr11 68066022 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 17486 chr11 68084314 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17487 chr11 68091444 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 17488 chr11 68094293 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 17489 chr11 68099803 . T TAA 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 17490 chr11 68104922 . AATT A 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17491 chr11 68114988 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17492 chr11 68115350 . G A 6.2 . DP=5;AF1=0.4999;CI95=0.5,0.5;DP4=0,2,1,1;MQ=49;PV4=1,0.0025,0.14,1 PL:DP:SP:GT:GQ 35,0,80:4:0:0/1:38 | |
| 17493 chr11 68127888 . agg aGgg 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 17494 chr11 68201007 . C T 53 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=5,0,5,0;MQ=48;PV4=1,0.0002,0.058,1 PL:DP:SP:GT:GQ 83,0,153:10:0:0/1:86 | |
| 17495 chr11 68202611 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17496 chr11 68206173 . T C 21 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=5,8,0,3;MQ=48;PV4=0.51,0.3,1.3e-08,1 PL:DP:SP:GT:GQ 51,0,255:16:3:0/1:54 | |
| 17497 chr11 68209519 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 17498 chr11 68216204 . G GTGAGAA 10.8 . INDEL;DP=4;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=48 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 17499 chr11 68217730 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17500 chr11 68222869 . A T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 17501 chr11 68230233 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 17502 chr11 68273350 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 17503 chr11 68285689 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17504 chr11 68290877 . T C 6.98 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,44:2:0:0/1:38 | |
| 17505 chr11 68296166 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 17506 chr11 68300249 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 17507 chr11 68315798 . C A 20.6 . DP=21;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=49 PL:DP:SP:GT:GQ 53,12,0:4:0:1/1:72 | |
| 17508 chr11 68332294 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 17509 chr11 68333043 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 17510 chr11 68353882 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17511 chr11 68356825 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 17512 chr11 68371879 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 17513 chr11 68377446 . C T 28 . DP=11;AF1=0.5;CI95=0.5,0.5;DP4=0,5,1,4;MQ=49;PV4=1,0.017,0.052,0.48 PL:DP:SP:GT:GQ 58,0,125:10:0:0/1:61 | |
| 17514 chr11 68379182 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 17515 chr11 68390316 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 17516 chr11 68408961 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 17517 chr11 68409065 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 17518 chr11 68420735 . C G 3.01 . DP=3;AF1=0.4997;CI95=0.5,0.5;DP4=2,0,1,0;MQ=45;PV4=1,0.3,0.26,0.33 PL:DP:SP:GT:GQ 30,0,70:3:0:0/1:33 | |
| 17519 chr11 68431268 . G A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 17520 chr11 68447390 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 17521 chr11 68448502 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17522 chr11 68449269 . tc tCAc 3.81 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 17523 chr11 68452992 . CCTG C 7.35 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,41:2:0:0/1:42 | |
| 17524 chr11 68455596 . G T 11.3 . DP=13;AF1=0.5012;CI95=0.5,0.5;DP4=0,2,0,4;MQ=49;PV4=1,0.17,0.2,1 PL:DP:SP:GT:GQ 41,0,23:6:0:0/1:26 | |
| 17525 chr11 68457238 . CT CTCTAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17526 chr11 68458470 . T C 89 . DP=29;AF1=0.5;CI95=0.5,0.5;DP4=4,11,1,8;MQ=49;PV4=0.61,0.00034,5.5e-06,1 PL:DP:SP:GT:GQ 119,0,255:24:2:0/1:99 | |
| 17527 chr11 68467136 . t tAACATAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17528 chr11 68478293 . A G 13 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=45 PL:DP:SP:GT:GQ 44,6,0:2:0:1/1:49 | |
| 17529 chr11 68478698 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 17530 chr11 68505792 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 17531 chr11 68506450 . AG AGG 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 17532 chr11 68510891 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 17533 chr11 68522571 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 17534 chr11 68525266 . A G 14.1 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=48 PL:DP:SP:GT:GQ 46,9,0:3:0:1/1:63 | |
| 17535 chr11 68530257 . C T 56 . DP=29;AF1=0.5;CI95=0.5,0.5;DP4=1,14,0,11;MQ=48;PV4=1,2e-07,5.9e-07,1 PL:DP:SP:GT:GQ 86,0,244:26:0:0/1:89 | |
| 17536 chr11 68533750 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 17537 chr11 68543346 . ct cTGGt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17538 chr11 68559951 . C CCACTGG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 17539 chr11 68563420 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17540 chr11 68564233 . CCG CCGCG 12.7 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17541 chr11 68567807 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 17542 chr11 68570638 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 17543 chr11 68585466 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17544 chr11 68589445 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17545 chr11 68616073 . cg cGTg 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 17546 chr11 68637737 . G C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 17547 chr11 68645631 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17548 chr11 68658274 . CTG CTGGTG 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,2,1,0;MQ=50;PV4=0.33,1,1,0.37 PL:DP:SP:GT:GQ 41,0,56:3:0:0/1:44 | |
| 17549 chr11 68675922 . T C 46 . DP=10;AF1=0.5;CI95=0.5,0.5;DP4=4,2,2,2;MQ=48;PV4=1,0.00096,0.041,1 PL:DP:SP:GT:GQ 76,0,211:10:0:0/1:79 | |
| 17550 chr11 68680591 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 17551 chr11 68700814 . A T 6.98 . DP=9;AF1=0.4999;CI95=0.5,0.5;DP4=1,5,2,0;MQ=48;PV4=0.11,0.21,1.3e-06,1 PL:DP:SP:GT:GQ 36,0,155:8:10:0/1:39 | |
| 17552 chr11 68701231 . C A 8.44 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 39,6,0:2:0:1/1:49 | |
| 17553 chr11 68703761 . C T 3.01 . DP=19;AF1=0.4997;CI95=0.5,0.5;DP4=1,6,0,4;MQ=48;PV4=1,0.0047,8.6e-05,1 PL:DP:SP:GT:GQ 30,0,185:11:0:0/1:33 | |
| 17554 chr11 68703887 . G A 52 . DP=11;AF1=0.5;CI95=0.5,0.5;DP4=2,1,1,4;MQ=49;PV4=0.46,0.0027,0.11,1 PL:DP:SP:GT:GQ 82,0,105:8:3:0/1:85 | |
| 17555 chr11 68706935 . A G 3.07 . DP=3;AF1=0.5126;CI95=0.5,0.5;DP4=1,0,2,0;MQ=50;PV4=1,0.33,0.33,1 PL:DP:SP:GT:GQ 30,0,13:3:0:0/1:16 | |
| 17556 chr11 68721026 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 17557 chr11 68731961 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 17558 chr11 68735405 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 17559 chr11 68735766 . A C 3.55 . DP=2;AF1=0.5014;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,22:2:0:0/1:24 | |
| 17560 chr11 68747463 . C G 20.8 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=46 PL:DP:SP:GT:GQ 52,6,0:2:0:1/1:49 | |
| 17561 chr11 68748003 . T C 99 . DP=27;AF1=0.5;CI95=0.5,0.5;DP4=0,6,5,12;MQ=48;PV4=0.27,1.7e-05,0.019,1 PL:DP:SP:GT:GQ 192,0,128:23:6:0/1:99 | |
| 17562 chr11 68749969 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 17563 chr11 68755404 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 17564 chr11 68773740 . G A 20 . DP=8;AF1=0.5;CI95=0.5,0.5;DP4=1,3,0,3;MQ=48;PV4=1,0.19,0.0074,1 PL:DP:SP:GT:GQ 50,0,96:7:0:0/1:53 | |
| 17565 chr11 68782115 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 17566 chr11 68782559 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 17567 chr11 68784754 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 17568 chr11 68786928 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 17569 chr11 68796191 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 17570 chr11 68808312 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17571 chr11 68817019 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 17572 chr11 68826996 . g gATACGA 5.08 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,1,1,0.45 PL:DP:SP:GT:GQ 41,0,83:3:0:0/1:44 | |
| 17573 chr11 68834157 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 17574 chr11 68851877 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17575 chr11 68852624 . TG TGTGAG 7.35 . INDEL;DP=8;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 17576 chr11 68882455 . AGCTG AG 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 17577 chr11 68922984 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 17578 chr11 68927984 . A T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 17579 chr11 68940972 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 17580 chr11 68947283 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17581 chr11 68961659 . gcc gCcc 14.4 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=50 PL:DP:SP:GT:GQ 53,6,0:2:0:1/1:49 | |
| 17582 chr11 68969797 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17583 chr11 68969801 . C G 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17584 chr11 69012924 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17585 chr11 69035497 . T A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 17586 chr11 69041210 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17587 chr11 69055393 . G C 3.55 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17588 chr11 69058507 . G A 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17589 chr11 69061987 . G C 4.77 . DP=2;AF1=0.5007;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,25:2:0:0/1:27 | |
| 17590 chr11 69063136 . C T 99 . DP=30;AF1=1;CI95=1,1;DP4=0,0,1,11;MQ=48 PL:DP:SP:GT:GQ 143,36,0:12:0:1/1:99 | |
| 17591 chr11 69063393 . T C 99 . DP=7;AF1=1;CI95=1,1;DP4=0,0,5,2;MQ=47 PL:DP:SP:GT:GQ 143,21,0:7:0:1/1:84 | |
| 17592 chr11 69063572 . A G 99 . DP=23;AF1=1;CI95=1,1;DP4=0,0,2,14;MQ=45 PL:DP:SP:GT:GQ 241,48,0:16:0:1/1:99 | |
| 17593 chr11 69063788 . GT GTCT 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17594 chr11 69068342 . t tCAG 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 17595 chr11 69069426 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17596 chr11 69071377 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 17597 chr11 69076703 . G GCAGACC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17598 chr11 69086449 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17599 chr11 69174120 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17600 chr11 69200513 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17601 chr11 69201952 . C A 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17602 chr11 69205378 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 17603 chr11 69207476 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 17604 chr11 69209331 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 17605 chr11 69211568 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 17606 chr11 69215468 . GC GCAC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 17607 chr11 69221608 . t tAGAGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17608 chr11 69228996 . T A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 17609 chr11 69230425 . T C 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,39:2:0:0/1:38 | |
| 17610 chr11 69252371 . a aATGG 7.52 . INDEL;DP=2;AF1=0.5263;CI95=0.5,1;DP4=1,0,0,1;MQ=37;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,10:2:0:0/1:13 | |
| 17611 chr11 69266611 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17612 chr11 69284560 . C T 20.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=45 PL:DP:SP:GT:GQ 52,6,0:2:0:1/1:49 | |
| 17613 chr11 69300673 . A C 11.3 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 17614 chr11 69308191 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 17615 chr11 69310620 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17616 chr11 69312470 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17617 chr11 69318450 . A T 6.21 . DP=2;AF1=0.5024;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,20:2:0:0/1:23 | |
| 17618 chr11 69329018 . C A 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 17619 chr11 69329848 . GAAA GA 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 17620 chr11 69337875 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 17621 chr11 69345130 . cc cCATTTTc 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17622 chr11 69349417 . G A 30.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=45 PL:DP:SP:GT:GQ 62,6,0:2:0:1/1:49 | |
| 17623 chr11 69383804 . C A 3.78 . DP=4;AF1=0.5552;CI95=0.5,1;DP4=1,0,0,1;MQ=32;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,7:2:0:0/1:10 | |
| 17624 chr11 69392515 . A T 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 17625 chr11 69395517 . G A 11.4 . DP=4;AF1=0.504;CI95=0.5,0.5;DP4=1,0,2,0;MQ=48;PV4=1,1,0.077,1 PL:DP:SP:GT:GQ 41,0,18:3:0:0/1:21 | |
| 17626 chr11 69399433 . ac aCTCc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17627 chr11 69407514 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17628 chr11 69413243 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 17629 chr11 69432680 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17630 chr11 69440645 . c cAGT 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17631 chr11 69441288 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 17632 chr11 69442501 . C T 14.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=48 PL:DP:SP:GT:GQ 46,6,0:2:0:1/1:49 | |
| 17633 chr11 69444964 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17634 chr11 69444976 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 17635 chr11 69450243 . C A 6.98 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,43:2:0:0/1:38 | |
| 17636 chr11 69459486 . CA CAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17637 chr11 69460434 . C T 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 17638 chr11 69463273 . G A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 17639 chr11 69467587 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 17640 chr11 69505738 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17641 chr11 69512978 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17642 chr11 69512982 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 17643 chr11 69513875 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 17644 chr11 69519328 . G T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 17645 chr11 69521526 . ACC ACCC 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 17646 chr11 69552585 . T A 13.2 . DP=7;AF1=0.5002;CI95=0.5,0.5;DP4=1,1,0,3;MQ=47;PV4=0.4,0.47,0.22,1 PL:DP:SP:GT:GQ 43,0,30:5:0:0/1:33 | |
| 17647 chr11 69556527 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 17648 chr11 69573566 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 17649 chr11 69573847 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17650 chr11 69592991 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17651 chr11 69603351 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 17652 chr11 69622778 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 17653 chr11 69625353 . G T 12.3 . DP=6;AF1=0.5;CI95=0.5,0.5;DP4=2,0,3,0;MQ=48;PV4=1,0.037,0.22,1 PL:DP:SP:GT:GQ 42,0,58:5:0:0/1:45 | |
| 17654 chr11 69627938 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 17655 chr11 69630978 . G A 6.2 . DP=3;AF1=0.5004;CI95=0.5,0.5;DP4=1,0,1,1;MQ=49;PV4=1,0,0,1 PL:DP:SP:GT:GQ 35,0,27:3:0:0/1:29 | |
| 17656 chr11 69636324 . CT CTT 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 17657 chr11 69637763 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17658 chr11 69640961 . A ACGCGATTAT 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17659 chr11 69656640 . A G 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17660 chr11 69663132 . A G 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17661 chr11 69675189 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17662 chr11 69684992 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 17663 chr11 69688592 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 17664 chr11 69695389 . G T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 17665 chr11 69702505 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17666 chr11 69702948 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 17667 chr11 69708906 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 17668 chr11 69709251 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 17669 chr11 69713378 . tt tTCCTTTTTCTCAt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17670 chr11 69793075 . C T 3.02 . DP=4;AF1=0.5001;CI95=0.5,0.5;DP4=1,0,0,1;MQ=43;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,28:2:0:0/1:29 | |
| 17671 chr11 69797258 . CCA C 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 17672 chr11 69799125 . g gTGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17673 chr11 69808697 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 17674 chr11 69814605 . G GAACACAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17675 chr11 69838560 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 17676 chr11 69846204 . T C 4.13 . DP=2;AF1=0.5001;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,30:2:0:0/1:31 | |
| 17677 chr11 69853146 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17678 chr11 69857597 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17679 chr11 69864042 . T C 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 17680 chr11 69865669 . ttgt tTGTGtgt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17681 chr11 69875806 . T C 4.14 . DP=2;AF1=0.5014;CI95=0.5,0.5;DP4=0,1,1,0;MQ=43;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,22:2:0:0/1:25 | |
| 17682 chr11 69875827 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17683 chr11 69878253 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 17684 chr11 69882172 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 17685 chr11 69894739 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17686 chr11 69897680 . tg tGAGg 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 17687 chr11 69907613 . t tGTCACA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17688 chr11 69938945 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 17689 chr11 69946513 . t tCG 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 17690 chr11 69950009 . TG TGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17691 chr11 69951998 . TAATTG T 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17692 chr11 69953648 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 17693 chr11 69955640 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 17694 chr11 69963984 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17695 chr11 69989181 . C T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 17696 chr11 69992846 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17697 chr11 70003588 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17698 chr11 70004545 . A G 47.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=43 PL:DP:SP:GT:GQ 79,6,0:2:0:1/1:49 | |
| 17699 chr11 70004775 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 17700 chr11 70016247 . TGGG TGGGG 21.3 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=50 PL:DP:SP:GT:GQ 60,6,0:2:0:1/1:49 | |
| 17701 chr11 70019487 . A AG 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 17702 chr11 70022294 . C G 5.48 . DP=2;AF1=0.5031;CI95=0.5,0.5;DP4=0,1,0,1;MQ=39;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,19:2:0:0/1:22 | |
| 17703 chr11 70037067 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 17704 chr11 70037651 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 17705 chr11 70039511 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17706 chr11 70045058 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 17707 chr11 70081894 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 17708 chr11 70093626 . c cTA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 17709 chr11 70098492 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 17710 chr11 70132742 . G GACACTGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17711 chr11 70149745 . T G 9.31 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=48 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 17712 chr11 70169230 . cc cCCACTCAc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17713 chr11 70176283 . T A 6.2 . DP=11;AF1=0.5001;CI95=0.5,0.5;DP4=1,0,3,1;MQ=46;PV4=1,0.006,1,1 PL:DP:SP:GT:GQ 35,0,32:5:0:0/1:33 | |
| 17714 chr11 70180582 . C CTTTCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17715 chr11 70185218 . A T 3.56 . DP=5;AF1=0.503;CI95=0.5,0.5;DP4=1,0,2,0;MQ=49;PV4=1,0,0,0.41 PL:DP:SP:GT:GQ 31,0,19:3:0:0/1:22 | |
| 17716 chr11 70189477 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17717 chr11 70201688 . A G 20 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=2,0,3,0;MQ=48;PV4=1,0.032,0.014,0.44 PL:DP:SP:GT:GQ 50,0,49:5:0:0/1:49 | |
| 17718 chr11 70201977 . T G 6.98 . DP=23;AF1=0.4999;CI95=0.5,0.5;DP4=0,9,0,4;MQ=48;PV4=1,1,7.8e-05,0.49 PL:DP:SP:GT:GQ 36,0,82:13:0:0/1:39 | |
| 17719 chr11 70201979 . G T 3.01 . DP=24;AF1=0.4997;CI95=0.5,0.5;DP4=0,5,0,2;MQ=49;PV4=1,0.34,0.0026,1 PL:DP:SP:GT:GQ 30,0,101:7:0:0/1:33 | |
| 17720 chr11 70208311 . G A 99 . DP=34;AF1=0.5;CI95=0.5,0.5;DP4=5,16,3,8;MQ=49;PV4=1,2.1e-08,8.1e-06,0.39 PL:DP:SP:GT:GQ 147,0,255:32:0:0/1:99 | |
| 17721 chr11 70208350 . G A 81.1 . DP=29;AF1=1;CI95=1,1;DP4=0,0,4,3;MQ=48 PL:DP:SP:GT:GQ 114,21,0:7:0:1/1:84 | |
| 17722 chr11 70217484 . C G 5.46 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 17723 chr11 70251804 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17724 chr11 70257669 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 17725 chr11 70266442 . A G 57 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=5,0,7,0;MQ=48;PV4=1,5.6e-10,0.0002,1 PL:DP:SP:GT:GQ 87,0,150:12:0:0/1:90 | |
| 17726 chr11 70266602 . A C 3.01 . DP=33;AF1=0.4997;CI95=0.5,0.5;DP4=3,7,0,4;MQ=49;PV4=0.51,0.13,1,1 PL:DP:SP:GT:GQ 30,0,176:14:3:0/1:33 | |
| 17727 chr11 70271500 . C A 4.77 . DP=15;AF1=0.4999;CI95=0.5,0.5;DP4=3,2,0,2;MQ=49;PV4=0.43,0.25,0,0.44 PL:DP:SP:GT:GQ 33,0,135:7:4:0/1:36 | |
| 17728 chr11 70278702 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17729 chr11 70281154 . T A 11.3 . DP=29;AF1=0.5;CI95=0.5,0.5;DP4=2,9,0,6;MQ=50;PV4=0.51,0.39,0.0043,0.00034 PL:DP:SP:GT:GQ 41,0,125:17:3:0/1:44 | |
| 17730 chr11 70297591 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 17731 chr11 70299874 . c cGTAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17732 chr11 70304202 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 17733 chr11 70304276 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 17734 chr11 70306327 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17735 chr11 70331389 . G A 4.14 . DP=7;AF1=0.5024;CI95=0.5,0.5;DP4=1,0,2,0;MQ=49;PV4=1,0.15,0.33,1 PL:DP:SP:GT:GQ 32,0,20:3:0:0/1:23 | |
| 17736 chr11 70332694 . T C 5.46 . DP=14;AF1=0.4999;CI95=0.5,0.5;DP4=5,0,0,3;MQ=49;PV4=0.018,0.0044,0.34,1 PL:DP:SP:GT:GQ 34,0,144:8:17:0/1:37 | |
| 17737 chr11 70345293 . GGCTGT G 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 17738 chr11 70349061 . A G 99 . DP=45;AF1=1;CI95=1,1;DP4=1,1,4,33;MQ=47;PV4=0.24,1,0.0012,1 PL:DP:SP:GT:GQ 216,69,0:39:6:1/1:99 | |
| 17739 chr11 70352342 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 17740 chr11 70367226 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17741 chr11 70367915 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 17742 chr11 70381450 . ccattcatt ccatt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17743 chr11 70388125 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17744 chr11 70399715 . C T 18.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 50,6,0:2:0:1/1:49 | |
| 17745 chr11 70401049 . cagagag cagag 5.08 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 17746 chr11 70401057 . cag c 8.19 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 17747 chr11 70403385 . C T 42 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,1;MQ=47 PL:DP:SP:GT:GQ 74,9,0:3:0:1/1:63 | |
| 17748 chr11 70410280 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 17749 chr11 70410525 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 17750 chr11 70420139 . A T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 17751 chr11 70425963 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 17752 chr11 70427312 . T TTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17753 chr11 70428477 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 17754 chr11 70429252 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 17755 chr11 70439839 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 17756 chr11 70449792 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17757 chr11 70469909 . agt aGTGTgt 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 17758 chr11 70479100 . G A 6.2 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,44:2:0:0/1:37 | |
| 17759 chr11 70482314 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17760 chr11 70483093 . gt gTt 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 17761 chr11 70504020 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17762 chr11 70508074 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 17763 chr11 70514754 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 17764 chr11 70517147 . C T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 17765 chr11 70518789 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 17766 chr11 70521781 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17767 chr11 70537408 . G GATACATAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17768 chr11 70545454 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 17769 chr11 70552659 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 17770 chr11 70558118 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17771 chr11 70559278 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17772 chr11 70559726 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 17773 chr11 70563512 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17774 chr11 70572682 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17775 chr11 70578654 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 17776 chr11 70593892 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17777 chr11 70603524 . C A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 17778 chr11 70614662 . G GA 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 17779 chr11 70619225 . G GAT 9.05 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 17780 chr11 70633287 . ccaaca cca 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17781 chr11 70637168 . a aCTG 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 17782 chr11 70653302 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17783 chr11 70654871 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17784 chr11 70656951 . C CACCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17785 chr11 70689132 . C CGATG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17786 chr11 70697301 . CTTTCCTT CT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17787 chr11 70709765 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 17788 chr11 70721795 . t tTCTGCTCTCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17789 chr11 70722745 . TA TACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17790 chr11 70731715 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17791 chr11 70738247 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17792 chr11 70739510 . CA CATTCGTAAAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17793 chr11 70742819 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17794 chr11 70754314 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 17795 chr11 70768750 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 17796 chr11 70779344 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 17797 chr11 70783084 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 17798 chr11 70784248 . CA CAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17799 chr11 70795903 . C A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 17800 chr11 70802159 . TT TTGCAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17801 chr11 70803119 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 17802 chr11 70803194 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 17803 chr11 70810497 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17804 chr11 70812222 . G A 7.91 . DP=2;AF1=0.5162;CI95=0.5,1;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,12:2:0:0/1:15 | |
| 17805 chr11 70820837 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17806 chr11 70821686 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17807 chr11 70856960 . TGAG T 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17808 chr11 70858890 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 17809 chr11 70867823 . G A 22.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 54,6,0:2:0:1/1:49 | |
| 17810 chr11 70886582 . G T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 17811 chr11 70896813 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17812 chr11 70921949 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 17813 chr11 70928798 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 17814 chr11 70934893 . CT CTTATGTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17815 chr11 70968712 . g gATA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17816 chr11 70969612 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17817 chr11 70984885 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17818 chr11 70995379 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 17819 chr11 70998386 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 17820 chr11 71003810 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17821 chr11 71009399 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 17822 chr11 71019412 . G A 17.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 49,6,0:2:0:1/1:49 | |
| 17823 chr11 71027157 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 17824 chr11 71038944 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 17825 chr11 71053134 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17826 chr11 71055047 . gaca gACaca 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,38:2:0:0/1:40 | |
| 17827 chr11 71075788 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 17828 chr11 71090027 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 17829 chr11 71092898 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17830 chr11 71100978 . C G 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 17831 chr11 71103564 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 17832 chr11 71111744 . acca aCCACTcca 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17833 chr11 71112693 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 17834 chr11 71118323 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 17835 chr11 71122855 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 17836 chr11 71127082 . TC TCC 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 17837 chr11 71127178 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 17838 chr11 71130953 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17839 chr11 71144332 . A C 6.98 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,44:2:0:0/1:38 | |
| 17840 chr11 71145326 . G A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 17841 chr11 71146691 . A G 45 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=4,6,2,1;MQ=48;PV4=0.56,0.28,0,1 PL:DP:SP:GT:GQ 75,0,255:13:3:0/1:78 | |
| 17842 chr11 71150158 . A C 99 . DP=17;AF1=1;CI95=0.5,1;DP4=0,2,0,14;MQ=44;PV4=1,1,0,1 PL:DP:SP:GT:GQ 202,13,0:16:0:1/1:65 | |
| 17843 chr11 71152461 . A G 63 . DP=23;AF1=0.5;CI95=0.5,0.5;DP4=1,11,2,2;MQ=48;PV4=0.14,0.077,6.1e-07,0.27 PL:DP:SP:GT:GQ 93,0,255:16:9:0/1:96 | |
| 17844 chr11 71155153 . A G 8.64 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=5,5,3,1;MQ=49;PV4=0.58,0.02,0.017,1 PL:DP:SP:GT:GQ 38,0,255:14:2:0/1:41 | |
| 17845 chr11 71169480 . C T 99 . DP=61;AF1=0.5;CI95=0.5,0.5;DP4=16,22,10,11;MQ=49;PV4=0.79,3.4e-17,1.9e-28,1 PL:DP:SP:GT:GQ 158,0,255:59:1:0/1:99 | |
| 17846 chr11 71169547 . G C 99 . DP=63;AF1=0.5;CI95=0.5,0.5;DP4=14,25,7,11;MQ=49;PV4=1,4.2e-15,0.00023,1 PL:DP:SP:GT:GQ 145,0,255:57:0:0/1:99 | |
| 17847 chr11 71169648 . A G 41 . DP=30;AF1=0.5;CI95=0.5,0.5;DP4=3,13,0,7;MQ=49;PV4=0.53,0.00094,1.1e-07,1 PL:DP:SP:GT:GQ 71,0,255:23:3:0/1:74 | |
| 17848 chr11 71169673 . C A 7.8 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=0,7,0,3;MQ=49;PV4=1,0.082,0.04,1 PL:DP:SP:GT:GQ 37,0,137:10:0:0/1:40 | |
| 17849 chr11 71174452 . A G 42 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=6,2,7,1;MQ=49;PV4=1,0.00015,0.075,1 PL:DP:SP:GT:GQ 72,0,217:16:0:0/1:75 | |
| 17850 chr11 71185357 . G A 7.8 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=3,0,3,0;MQ=49;PV4=1,0.045,0.079,1 PL:DP:SP:GT:GQ 37,0,51:6:0:0/1:40 | |
| 17851 chr11 71185479 . T C 82 . DP=63;AF1=0.5;CI95=0.5,0.5;DP4=18,22,11,9;MQ=50;PV4=0.59,2.2e-21,0.00045,1 PL:DP:SP:GT:GQ 112,0,255:60:2:0/1:99 | |
| 17852 chr11 71189344 . TT TTCCTCTGAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17853 chr11 71192527 . G GTC 7.35 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 17854 chr11 71194209 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 17855 chr11 71194745 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 17856 chr11 71202826 . G T 6.2 . DP=6;AF1=0.4999;CI95=0.5,0.5;DP4=4,0,2,0;MQ=49;PV4=1,0.00046,0.021,1 PL:DP:SP:GT:GQ 35,0,138:6:0:0/1:38 | |
| 17857 chr11 71213486 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 17858 chr11 71217465 . G GCCCAGCGACTAGC 70.5 . INDEL;DP=12;AF1=1;CI95=1,1;DP4=0,0,0,11;MQ=50 PL:DP:SP:GT:GQ 111,33,0:11:0:1/1:99 | |
| 17859 chr11 71230569 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17860 chr11 71238264 . AG AGGTG 5.08 . INDEL;DP=12;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,1,1,0.39 PL:DP:SP:GT:GQ 41,0,39:3:0:0/1:40 | |
| 17861 chr11 71246257 . g gTAGAAAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17862 chr11 71249077 . G A 4.13 . DP=4;AF1=0.4998;CI95=0.5,0.5;DP4=2,0,1,0;MQ=39;PV4=1,0.31,1,1 PL:DP:SP:GT:GQ 32,0,47:3:0:0/1:35 | |
| 17863 chr11 71254385 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 17864 chr11 71259822 . A G 16.1 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=12,2,5,1;MQ=43;PV4=1,0.00018,4.9e-07,1 PL:DP:SP:GT:GQ 46,0,255:20:0:0/1:49 | |
| 17865 chr11 71271651 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 17866 chr11 71286211 . g gACATAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17867 chr11 71286981 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17868 chr11 71349194 . CT CTTTTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17869 chr11 71352767 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 17870 chr11 71413925 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 17871 chr11 71446428 . G A 13 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=46 PL:DP:SP:GT:GQ 44,6,0:2:0:1/1:49 | |
| 17872 chr11 71490490 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17873 chr11 71500919 . A G 5.46 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 17874 chr11 71500954 . A C 16.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=46 PL:DP:SP:GT:GQ 48,6,0:2:0:1/1:49 | |
| 17875 chr11 71502746 . C T 58 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,1;MQ=32 PL:DP:SP:GT:GQ 90,9,0:3:0:1/1:63 | |
| 17876 chr11 71502930 . A G 46.8 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=42 PL:DP:SP:GT:GQ 78,6,0:2:0:1/1:49 | |
| 17877 chr11 71504475 . T C 6.98 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 17878 chr11 71506121 . T G 6.61 . DP=4;AF1=0.9998;CI95=0.5,1;DP4=0,1,1,1;MQ=34;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,2,0:3:0:1/1:37 | |
| 17879 chr11 71507089 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 17880 chr11 71511729 . A T 3.01 . DP=8;AF1=0.4997;CI95=0.5,0.5;DP4=2,3,1,1;MQ=48;PV4=1,0.049,0.12,0.19 PL:DP:SP:GT:GQ 30,0,169:7:0:0/1:33 | |
| 17881 chr11 71576164 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 17882 chr11 71596390 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 17883 chr11 71619125 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 17884 chr11 71620150 . cat c 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 17885 chr11 71638742 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 17886 chr11 71668352 . G T 11.3 . DP=13;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,4;MQ=49;PV4=1,0.093,1,0.42 PL:DP:SP:GT:GQ 41,0,81:8:0:0/1:44 | |
| 17887 chr11 71668361 . GC G 3.66 . INDEL;DP=14;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=50 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 17888 chr11 71668362 . CTT CT 71.5 . INDEL;DP=13;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=50 PL:DP:SP:GT:GQ 112,21,0:7:0:1/1:84 | |
| 17889 chr11 71668425 . CGGTAGGACTGGT CGGT 7.35 . INDEL;DP=7;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 17890 chr11 71668430 . GG GGCGTG 12.7 . INDEL;DP=5;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17891 chr11 71668431 . GACTGGTCTT G 12.7 . INDEL;DP=5;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17892 chr11 71673973 . cat c 3.81 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=46 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 17893 chr11 71683231 . G C 18.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=46 PL:DP:SP:GT:GQ 50,6,0:2:0:1/1:49 | |
| 17894 chr11 71698801 . G A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 17895 chr11 71698918 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 17896 chr11 71701751 . A G 99 . DP=63;AF1=1;CI95=1,1;DP4=1,1,28,28;MQ=47;PV4=1,1,0.0039,1 PL:DP:SP:GT:GQ 255,126,0:58:0:1/1:99 | |
| 17897 chr11 71707150 . A G 7.59 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=43 PL:DP:SP:GT:GQ 38,6,0:2:0:1/1:49 | |
| 17898 chr11 71707465 . T C 99 . DP=14;AF1=1;CI95=1,1;DP4=0,0,0,12;MQ=48 PL:DP:SP:GT:GQ 139,36,0:12:0:1/1:99 | |
| 17899 chr11 71707489 . T C 4.11 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=47 PL:DP:SP:GT:GQ 34,9,0:3:0:1/1:63 | |
| 17900 chr11 71710849 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17901 chr11 71712531 . A G 29.5 . DP=13;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=49 PL:DP:SP:GT:GQ 62,12,0:4:0:1/1:72 | |
| 17902 chr11 71715218 . T C 88 . DP=24;AF1=1;CI95=1,1;DP4=0,0,8,1;MQ=48 PL:DP:SP:GT:GQ 121,27,0:9:0:1/1:99 | |
| 17903 chr11 71717300 . C T 68 . DP=19;AF1=1;CI95=1,1;DP4=0,0,0,16;MQ=49 PL:DP:SP:GT:GQ 101,48,0:16:0:1/1:99 | |
| 17904 chr11 71717337 . T C 70.1 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,6;MQ=47 PL:DP:SP:GT:GQ 103,18,0:6:0:1/1:90 | |
| 17905 chr11 71719619 . G T 15.9 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 47,6,0:2:0:1/1:49 | |
| 17906 chr11 71720616 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 17907 chr11 71723362 . G T 45.5 . DP=27;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=47 PL:DP:SP:GT:GQ 78,12,0:4:0:1/1:72 | |
| 17908 chr11 71727422 . A C 37 . DP=62;AF1=0.5001;CI95=0.5,0.5;DP4=1,1,1,5;MQ=49;PV4=0.46,0.041,0.22,1 PL:DP:SP:GT:GQ 67,0,34:8:3:0/1:37 | |
| 17909 chr11 71728908 . AGTCAACG AG 99 . INDEL;DP=14;AF1=0.5;CI95=0.5,0.5;DP4=1,1,0,7;MQ=50;PV4=0.22,1,1,1 PL:DP:SP:GT:GQ 189,0,60:9:0:0/1:63 | |
| 17910 chr11 71728910 . TCAACGC T 3.25 . INDEL;DP=7;AF1=0.5;CI95=0.5,0.5;DP4=1,2,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,79:4:0:0/1:41 | |
| 17911 chr11 71728912 . AACGCTGAC AAC 23.5 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,2;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 61,0,40:3:0:0/1:43 | |
| 17912 chr11 71729656 . A G 3.54 . DP=13;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,2;MQ=49;PV4=1,0.046,0.33,1 PL:DP:SP:GT:GQ 31,0,41:3:0:0/1:34 | |
| 17913 chr11 71732799 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17914 chr11 71746977 . C A 3.01 . DP=21;AF1=0.4997;CI95=0.5,0.5;DP4=5,3,0,4;MQ=49;PV4=0.081,0.047,0.00089,1 PL:DP:SP:GT:GQ 30,0,194:12:11:0/1:33 | |
| 17915 chr11 71747787 . T TC 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 17916 chr11 71750264 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 17917 chr11 71781137 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 17918 chr11 71781242 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 17919 chr11 71782543 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17920 chr11 71789525 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 17921 chr11 71790541 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 17922 chr11 71814443 . T A 12.3 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 17923 chr11 71822165 . G A 85 . DP=35;AF1=0.5;CI95=0.5,0.5;DP4=8,4,12,5;MQ=50;PV4=1,0.19,0.17,0.061 PL:DP:SP:GT:GQ 115,0,103:29:0:0/1:99 | |
| 17924 chr11 71822721 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 17925 chr11 71824640 . G T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 17926 chr11 71827872 . T G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 17927 chr11 71848928 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17928 chr11 71852338 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 17929 chr11 71852507 . ccacct c 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 17930 chr11 71855366 . G GCT 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 17931 chr11 71855534 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 17932 chr11 71864802 . T C 14.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 17933 chr11 71870069 . A G 3.01 . DP=3;AF1=0.4999;CI95=0.5,0.5;DP4=0,2,1,0;MQ=47;PV4=0.33,1,0.042,0.38 PL:DP:SP:GT:GQ 30,0,32:3:0:0/1:31 | |
| 17934 chr11 71879422 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17935 chr11 71903431 . G C 96 . DP=24;AF1=1;CI95=1,1;DP4=0,1,1,19;MQ=49;PV4=1,0.05,0.3,1 PL:DP:SP:GT:GQ 129,33,0:21:0:1/1:99 | |
| 17936 chr11 71929822 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17937 chr11 71934120 . G A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 17938 chr11 71939749 . G A 3.54 . DP=4;AF1=0.4998;CI95=0.5,0.5;DP4=0,3,0,1;MQ=48;PV4=1,0.3,0,0.055 PL:DP:SP:GT:GQ 31,0,109:4:0:0/1:34 | |
| 17939 chr11 71941212 . A G 99 . DP=16;AF1=1;CI95=1,1;DP4=0,0,2,13;MQ=49 PL:DP:SP:GT:GQ 148,45,0:15:0:1/1:99 | |
| 17940 chr11 71941381 . A G 91.3 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=44 PL:DP:SP:GT:GQ 124,15,0:5:0:1/1:75 | |
| 17941 chr11 71941812 . C T 35.3 . DP=17;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=49 PL:DP:SP:GT:GQ 68,15,0:5:0:1/1:75 | |
| 17942 chr11 71944090 . GAACC G 12.7 . INDEL;DP=4;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17943 chr11 71948444 . C G 3.54 . DP=9;AF1=0.4998;CI95=0.5,0.5;DP4=2,2,0,2;MQ=46;PV4=0.47,0.38,0.012,1 PL:DP:SP:GT:GQ 31,0,87:6:3:0/1:34 | |
| 17944 chr11 71948446 . T G 16.1 . DP=8;AF1=0.5001;CI95=0.5,0.5;DP4=1,0,0,3;MQ=44;PV4=0.25,0.0076,0.087,0.18 PL:DP:SP:GT:GQ 46,0,34:4:0:0/1:37 | |
| 17945 chr11 71948446 . TTC TTCTC 4.42 . INDEL;DP=8;AF1=0.5;CI95=0.5,0.5;DP4=1,1,0,2;MQ=50;PV4=1,1,1,0.23 PL:DP:SP:GT:GQ 40,0,82:4:0:0/1:43 | |
| 17946 chr11 71974196 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 17947 chr11 71974210 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 17948 chr11 71977918 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 17949 chr11 71991769 . A G 3.01 . DP=7;AF1=0.4997;CI95=0.5,0.5;DP4=3,0,2,0;MQ=47;PV4=1,0.0091,0.0091,1 PL:DP:SP:GT:GQ 30,0,109:5:0:0/1:33 | |
| 17950 chr11 72004722 . c cTGG 12.7 . INDEL;DP=6;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17951 chr11 72005283 . ATGTGTGTG ATGTGTGTGTG 96 . INDEL;DP=6;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=50 PL:DP:SP:GT:GQ 136,12,0:4:0:1/1:72 | |
| 17952 chr11 72024217 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 17953 chr11 72034026 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 17954 chr11 72040784 . T C 69 . DP=30;AF1=1;CI95=1,1;DP4=0,0,1,8;MQ=49 PL:DP:SP:GT:GQ 102,27,0:9:0:1/1:99 | |
| 17955 chr11 72059038 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17956 chr11 72069894 . A T 3.54 . DP=6;AF1=0.4998;CI95=0.5,0.5;DP4=4,0,2,0;MQ=47;PV4=1,0.038,5e-06,1 PL:DP:SP:GT:GQ 31,0,125:6:0:0/1:34 | |
| 17957 chr11 72076119 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 17958 chr11 72079608 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 17959 chr11 72089685 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17960 chr11 72103183 . A T 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17961 chr11 72109762 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 17962 chr11 72111745 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 17963 chr11 72114382 . T TGAGAG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17964 chr11 72128614 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17965 chr11 72145412 . T C 10.4 . DP=8;AF1=0.5004;CI95=0.5,0.5;DP4=1,1,3,0;MQ=49;PV4=0.4,0.45,0.2,0.13 PL:DP:SP:GT:GQ 40,0,28:5:0:0/1:31 | |
| 17966 chr11 72173429 . CT CTT 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 17967 chr11 72177991 . t tTGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17968 chr11 72178889 . a aCGTCAGTCCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17969 chr11 72190726 . C T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 17970 chr11 72194611 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17971 chr11 72195008 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 17972 chr11 72234643 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 17973 chr11 72246008 . TCAG T 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17974 chr11 72258428 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 17975 chr11 72258525 . a aCGAAG 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 17976 chr11 72274583 . cccgga c 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17977 chr11 72275373 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 17978 chr11 72275380 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17979 chr11 72288599 . G A 99 . DP=38;AF1=0.5;CI95=0.5,0.5;DP4=3,15,3,16;MQ=48;PV4=1,4.2e-13,3e-12,1 PL:DP:SP:GT:GQ 172,0,255:37:0:0/1:99 | |
| 17980 chr11 72288650 . TGGGGGG TGGGGG 8.15 . INDEL;DP=15;AF1=1;CI95=0.5,1;DP4=0,0,2,1;MQ=50 PL:DP:SP:GT:GQ 47,9,0:3:0:1/1:63 | |
| 17981 chr11 72288664 . C T 83 . DP=11;AF1=1;CI95=1,1;DP4=0,0,0,9;MQ=48 PL:DP:SP:GT:GQ 116,27,0:9:0:1/1:99 | |
| 17982 chr11 72289176 . C G 18.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=46 PL:DP:SP:GT:GQ 50,6,0:2:0:1/1:49 | |
| 17983 chr11 72290629 . G A 9.53 . DP=11;AF1=0.5006;CI95=0.5,0.5;DP4=1,1,2,1;MQ=50;PV4=1,0.25,0.25,1 PL:DP:SP:GT:GQ 39,0,26:5:0:0/1:29 | |
| 17984 chr11 72291927 . T C 10.2 . DP=16;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 41,6,0:2:0:1/1:49 | |
| 17985 chr11 72292353 . GA GAA 73.7 . INDEL;DP=9;AF1=1;CI95=0.5,1;DP4=0,0,4,1;MQ=50 PL:DP:SP:GT:GQ 114,15,0:5:0:1/1:75 | |
| 17986 chr11 72292860 . C T 99 . DP=10;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=43 PL:DP:SP:GT:GQ 144,15,0:5:0:1/1:75 | |
| 17987 chr11 72293038 . C CTA 3.25 . INDEL;DP=19;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,1;MQ=49;PV4=1,1,1,0.082 PL:DP:SP:GT:GQ 38,0,60:4:0:0/1:41 | |
| 17988 chr11 72293039 . G A 52 . DP=19;AF1=1;CI95=1,1;DP4=0,0,0,9;MQ=49 PL:DP:SP:GT:GQ 85,27,0:9:0:1/1:99 | |
| 17989 chr11 72293602 . A G 99 . DP=45;AF1=1;CI95=1,1;DP4=1,1,8,21;MQ=44;PV4=0.5,1,5.6e-05,1 PL:DP:SP:GT:GQ 255,45,0:31:3:1/1:99 | |
| 17990 chr11 72295906 . A G 99 . DP=31;AF1=1;CI95=1,1;DP4=0,0,28,1;MQ=49 PL:DP:SP:GT:GQ 149,87,0:29:0:1/1:99 | |
| 17991 chr11 72300009 . C A 4.13 . DP=7;AF1=0.4998;CI95=0.5,0.5;DP4=0,2,0,2;MQ=49;PV4=1,0.0053,0.019,0.46 PL:DP:SP:GT:GQ 32,0,58:4:0:0/1:35 | |
| 17992 chr11 72303578 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17993 chr11 72307681 . G A 13.2 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=1,4,0,4;MQ=49;PV4=1,0.19,0.097,1 PL:DP:SP:GT:GQ 43,0,81:9:0:0/1:46 | |
| 17994 chr11 72315292 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17995 chr11 72326210 . A G 99 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=0,7,0,6;MQ=47;PV4=1,0.00047,7.5e-13,1 PL:DP:SP:GT:GQ 136,0,185:13:0:0/1:99 | |
| 17996 chr11 72329914 . AACATA AA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 17997 chr11 72330362 . T C 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 17998 chr11 72331111 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 17999 chr11 72331823 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 18000 chr11 72334994 . A G 9.53 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 18001 chr11 72337740 . C T 6.2 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,44:2:0:0/1:37 | |
| 18002 chr11 72338934 . G C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 18003 chr11 72348485 . T G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 18004 chr11 72351875 . GT GTGCAGAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18005 chr11 72362067 . G A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 18006 chr11 72371155 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18007 chr11 72383183 . G A 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18008 chr11 72383776 . CTTAATTA CTTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18009 chr11 72398692 . CTT CTTGGTGGTGTT 12.7 . INDEL;DP=7;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18010 chr11 72401907 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18011 chr11 72401942 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18012 chr11 72404392 . A T 4.77 . DP=5;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,2,0;MQ=49;PV4=0.33,0.014,0.17,0.41 PL:DP:SP:GT:GQ 33,0,41:3:0:0/1:35 | |
| 18013 chr11 72407770 . G C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 18014 chr11 72408897 . G GTGCAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18015 chr11 72412675 . A G 36 . DP=13;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=45 PL:DP:SP:GT:GQ 68,9,0:3:0:1/1:63 | |
| 18016 chr11 72428825 . a aGG 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 18017 chr11 72435683 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18018 chr11 72444901 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18019 chr11 72450941 . T A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 18020 chr11 72454609 . A AAAACATAC 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 18021 chr11 72455865 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 18022 chr11 72465026 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 18023 chr11 72469458 . tgaggg tg 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 18024 chr11 72471954 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 18025 chr11 72483705 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18026 chr11 72486975 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18027 chr11 72492468 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18028 chr11 72514114 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18029 chr11 72533911 . C A 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 18030 chr11 72535847 . G C 4.77 . DP=34;AF1=0.4999;CI95=0.5,0.5;DP4=2,19,0,10;MQ=50;PV4=1,2.8e-07,0.075,1 PL:DP:SP:GT:GQ 33,0,255:31:0:0/1:36 | |
| 18031 chr11 72539717 . C A 6.98 . DP=17;AF1=0.4999;CI95=0.5,0.5;DP4=6,0,3,0;MQ=49;PV4=1,0.078,0.19,1 PL:DP:SP:GT:GQ 36,0,115:9:0:0/1:39 | |
| 18032 chr11 72564828 . C G 24.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=41 PL:DP:SP:GT:GQ 56,6,0:2:0:1/1:49 | |
| 18033 chr11 72570091 . cc cCTCTTCAGTc 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 18034 chr11 72576418 . T TCACGTGATG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18035 chr11 72583908 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18036 chr11 72623889 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18037 chr11 72624773 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18038 chr11 72651585 . T C 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,42:2:0:0/1:39 | |
| 18039 chr11 72651688 . GCC GCCCTCTCCC 3.25 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=1,2,1,0;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,68:4:0:0/1:41 | |
| 18040 chr11 72663207 . TGC TGCACCCTGGC 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 18041 chr11 72696961 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18042 chr11 72739287 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18043 chr11 72751921 . c cGAAAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18044 chr11 72782207 . a aGCAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18045 chr11 72790754 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18046 chr11 72792311 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=46 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18047 chr11 72795751 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18048 chr11 72807300 . ag aGTg 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 18049 chr11 72812185 . T TCTCCTAAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18050 chr11 72836398 . T C 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 18051 chr11 72841559 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18052 chr11 72841796 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18053 chr11 72844923 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18054 chr11 72852084 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18055 chr11 72876005 . AGT AGTATATCGT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 18056 chr11 72876403 . T G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 18057 chr11 72880468 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 18058 chr11 72887463 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18059 chr11 72909790 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 18060 chr11 72939186 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18061 chr11 72945341 . C T 3.01 . DP=78;AF1=0.4997;CI95=0.5,0.5;DP4=12,17,6,3;MQ=50;PV4=0.26,4.7e-05,0.16,1 PL:DP:SP:GT:GQ 30,0,255:38:6:0/1:33 | |
| 18062 chr11 72948077 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18063 chr11 72948824 . G GGCGTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18064 chr11 72949944 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18065 chr11 72971437 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18066 chr11 72976349 . T A 3.02 . DP=2;AF1=0.5023;CI95=0.5,0.5;DP4=1,0,0,1;MQ=42;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,20:2:0:0/1:23 | |
| 18067 chr11 72979754 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18068 chr11 72984569 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 18069 chr11 73012254 . A G 7.8 . DP=2;AF1=0.5006;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,26:2:0:0/1:29 | |
| 18070 chr11 73020357 . CC CCCAC 7.37 . INDEL;DP=4;AF1=0.5025;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,20:2:0:0/1:23 | |
| 18071 chr11 73022114 . G T 22 . DP=36;AF1=0.5;CI95=0.5,0.5;DP4=9,6,0,7;MQ=49;PV4=0.017,0.0094,0.011,1 PL:DP:SP:GT:GQ 52,0,255:22:18:0/1:55 | |
| 18072 chr11 73026651 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18073 chr11 73028831 . C G 4.33 . DP=2;AF1=0.5429;CI95=0.5,1;DP4=0,1,0,1;MQ=41;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,8:2:0:0/1:11 | |
| 18074 chr11 73036133 . C CGATG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18075 chr11 73037498 . c cTATCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18076 chr11 73043185 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18077 chr11 73049859 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 18078 chr11 73050530 . T G 3.69 . DP=2;AF1=0.5334;CI95=0.5,1;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,9:2:0:0/1:12 | |
| 18079 chr11 73055045 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 18080 chr11 73060857 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18081 chr11 73061130 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18082 chr11 73063797 . CT CTGCTT 12.7 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18083 chr11 73072965 . CCACACACACACAC CCACACACAC 32.2 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 71,6,0:2:0:1/1:49 | |
| 18084 chr11 73074364 . GG GGACAAG 5.79 . INDEL;DP=3;AF1=0.5001;CI95=0.5,0.5;DP4=1,0,0,1;MQ=48;PV4=1,1,1,1 PL:DP:SP:GT:GQ 42,0,33:2:0:0/1:35 | |
| 18085 chr11 73075518 . A C 37 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=4,1,0,6;MQ=49;PV4=0.015,0.029,0.013,1 PL:DP:SP:GT:GQ 67,0,127:11:18:0/1:70 | |
| 18086 chr11 73077354 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18087 chr11 73082520 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18088 chr11 73086514 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18089 chr11 73092064 . tc tCCGCc 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18090 chr11 73098894 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18091 chr11 73100167 . A G 4.77 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18092 chr11 73100827 . C T 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 18093 chr11 73101807 . G T 12.3 . DP=6;AF1=0.5;CI95=0.5,0.5;DP4=1,0,2,0;MQ=47;PV4=1,0.0097,0,0.17 PL:DP:SP:GT:GQ 42,0,41:3:0:0/1:41 | |
| 18094 chr11 73118234 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18095 chr11 73119948 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18096 chr11 73120653 . A G 99 . DP=58;AF1=1;CI95=1,1;DP4=1,1,22,26;MQ=49;PV4=1,0.0058,0.31,1 PL:DP:SP:GT:GQ 188,95,0:50:0:1/1:99 | |
| 18097 chr11 73122340 . A G 63 . DP=6;AF1=0.5003;CI95=0.5,0.5;DP4=2,0,4,0;MQ=47;PV4=1,1,0.022,1 PL:DP:SP:GT:GQ 93,0,30:6:0:0/1:33 | |
| 18098 chr11 73130828 . TG TGCCTGG 7.36 . INDEL;DP=2;AF1=0.5012;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,23:2:0:0/1:26 | |
| 18099 chr11 73175509 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 18100 chr11 73184204 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18101 chr11 73217531 . G C 5.46 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18102 chr11 73225940 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18103 chr11 73230363 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18104 chr11 73230886 . t tCGAGAGTCAGCGATGTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18105 chr11 73249124 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18106 chr11 73264572 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18107 chr11 73270903 . G C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 18108 chr11 73279296 . CTT CTTTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18109 chr11 73286013 . T C 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18110 chr11 73288212 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18111 chr11 73289243 . ag aGTCg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18112 chr11 73290861 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18113 chr11 73307381 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18114 chr11 73308353 . G A 4.61 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 34,6,0:2:0:1/1:49 | |
| 18115 chr11 73320443 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18116 chr11 73336326 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18117 chr11 73357339 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18118 chr11 73364629 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 18119 chr11 73388995 . T G 12.3 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,3;MQ=47;PV4=1,0.3,0.067,1 PL:DP:SP:GT:GQ 42,0,74:7:0:0/1:45 | |
| 18120 chr11 73390844 . G A 3.02 . DP=6;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18121 chr11 73418627 . C T 4.13 . DP=6;AF1=0.4998;CI95=0.5,0.5;DP4=0,3,1,1;MQ=49;PV4=0.4,0.049,0.14,1 PL:DP:SP:GT:GQ 32,0,102:5:0:0/1:35 | |
| 18122 chr11 73445884 . C G 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,43:2:0:0/1:34 | |
| 18123 chr11 73451192 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18124 chr11 73471777 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18125 chr11 73473949 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18126 chr11 73478105 . T TTGTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18127 chr11 73491827 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18128 chr11 73492093 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18129 chr11 73499817 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18130 chr11 73549291 . G C 6.98 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18131 chr11 73587093 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18132 chr11 73589789 . GGTAAGCCT GAATGGAACAGTAAGCCT 5.08 . INDEL;DP=15;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,71:3:0:0/1:44 | |
| 18133 chr11 73598715 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18134 chr11 73609245 . g gTC 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 18135 chr11 73610383 . AAA AAAGAA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18136 chr11 73611478 . C G 32.5 . DP=23;AF1=1;CI95=0.5,1;DP4=0,0,1,3;MQ=49 PL:DP:SP:GT:GQ 65,12,0:4:0:1/1:72 | |
| 18137 chr11 73611520 . A G 60 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=0,7,0,9;MQ=49;PV4=1,0.00014,0.01,1 PL:DP:SP:GT:GQ 90,0,163:16:0:0/1:93 | |
| 18138 chr11 73616560 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18139 chr11 73638306 . G A 47.1 . DP=27;AF1=1;CI95=0.5,1;DP4=0,0,6,0;MQ=49 PL:DP:SP:GT:GQ 80,18,0:6:0:1/1:90 | |
| 18140 chr11 73639220 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18141 chr11 73657860 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18142 chr11 73662273 . C T 22 . DP=10;AF1=0.5;CI95=0.5,0.5;DP4=0,6,0,4;MQ=49;PV4=1,6.1e-06,0.17,0.25 PL:DP:SP:GT:GQ 52,0,172:10:0:0/1:55 | |
| 18143 chr11 73670645 . T C 99 . DP=35;AF1=1;CI95=1,1;DP4=0,0,21,9;MQ=46 PL:DP:SP:GT:GQ 255,90,0:30:0:1/1:99 | |
| 18144 chr11 73672645 . G C 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 18145 chr11 73673440 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 18146 chr11 73675862 . G GGGGGC 7.35 . INDEL;DP=2;AF1=0.5002;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,31:2:0:0/1:34 | |
| 18147 chr11 73681135 . G A 99 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=0,6,6,4;MQ=47;PV4=0.034,0.026,0.00017,0.28 PL:DP:SP:GT:GQ 174,0,133:16:15:0/1:99 | |
| 18148 chr11 73685235 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18149 chr11 73686464 . G T 3.54 . DP=5;AF1=0.4998;CI95=0.5,0.5;DP4=2,0,2,0;MQ=49;PV4=1,0.058,0.21,1 PL:DP:SP:GT:GQ 31,0,53:4:0:0/1:34 | |
| 18150 chr11 73687832 . G C 3.54 . DP=50;AF1=0.4998;CI95=0.5,0.5;DP4=19,11,5,2;MQ=49;PV4=1,7.5e-07,5.7e-08,1 PL:DP:SP:GT:GQ 31,0,255:37:0:0/1:34 | |
| 18151 chr11 73689104 . G A 25 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=1,3,2,2;MQ=48;PV4=1,0.0037,1,1 PL:DP:SP:GT:GQ 55,0,133:8:0:0/1:58 | |
| 18152 chr11 73692035 . CTT CTTT 28.2 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=50 PL:DP:SP:GT:GQ 67,6,0:2:0:1/1:49 | |
| 18153 chr11 73705575 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18154 chr11 73711774 . T TGTGTCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18155 chr11 73715542 . G A 39.1 . DP=36;AF1=1;CI95=0.5,1;DP4=0,0,5,1;MQ=50 PL:DP:SP:GT:GQ 72,18,0:6:0:1/1:90 | |
| 18156 chr11 73716469 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18157 chr11 73717219 . G A 54 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=1,4,9,0;MQ=49;PV4=0.005,0.00015,0.4,1 PL:DP:SP:GT:GQ 84,0,151:14:23:0/1:87 | |
| 18158 chr11 73717254 . A G 99 . DP=28;AF1=0.5;CI95=0.5,0.5;DP4=4,9,2,10;MQ=48;PV4=0.64,7.2e-05,2.3e-06,1 PL:DP:SP:GT:GQ 149,0,255:25:2:0/1:99 | |
| 18159 chr11 73720243 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 18160 chr11 73726727 . G C 5.56 . DP=3;AF1=0.5162;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,12:2:0:0/1:15 | |
| 18161 chr11 73729940 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18162 chr11 73755321 . T A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 18163 chr11 73760808 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18164 chr11 73768621 . T G 30 . DP=30;AF1=0.5;CI95=0.5,0.5;DP4=2,7,0,6;MQ=49;PV4=0.49,1,0.013,0.014 PL:DP:SP:GT:GQ 60,0,104:15:3:0/1:63 | |
| 18165 chr11 73768625 . G T 8.64 . DP=29;AF1=0.5;CI95=0.5,0.5;DP4=1,13,1,3;MQ=49;PV4=0.41,0.19,3.2e-06,0.099 PL:DP:SP:GT:GQ 38,0,190:18:4:0/1:41 | |
| 18166 chr11 73780377 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18167 chr11 73785006 . G GCTACATGTCC 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 18168 chr11 73785692 . A AGT 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,1,1,0.33 PL:DP:SP:GT:GQ 41,0,83:3:0:0/1:44 | |
| 18169 chr11 73789777 . T G 54.3 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=48 PL:DP:SP:GT:GQ 87,15,0:5:0:1/1:75 | |
| 18170 chr11 73796966 . A G 3.54 . DP=4;AF1=0.4998;CI95=0.5,0.5;DP4=0,3,0,1;MQ=48;PV4=1,0.2,0,0.22 PL:DP:SP:GT:GQ 31,0,111:4:0:0/1:34 | |
| 18171 chr11 73806475 . CT C 3.8 . INDEL;DP=9;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,2;MQ=50;PV4=1,0.00061,1,1 PL:DP:SP:GT:GQ 39,0,107:6:0:0/1:42 | |
| 18172 chr11 73809204 . T G 6.2 . DP=36;AF1=0.4999;CI95=0.5,0.5;DP4=12,7,0,6;MQ=49;PV4=0.015,0.0063,1.9e-05,1 PL:DP:SP:GT:GQ 35,0,255:25:18:0/1:38 | |
| 18173 chr11 73817600 . T G 16.2 . DP=9;AF1=0.505;CI95=0.5,0.5;DP4=0,1,0,3;MQ=48;PV4=1,0.14,0.36,0.14 PL:DP:SP:GT:GQ 46,0,17:4:0:0/1:20 | |
| 18174 chr11 73822331 . T G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 18175 chr11 73833957 . c cGA 7.98 . INDEL;DP=11;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=50 PL:DP:SP:GT:GQ 46,6,0:2:0:1/1:49 | |
| 18176 chr11 73836983 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18177 chr11 73841487 . c cGAGTCGG 7.36 . INDEL;DP=2;AF1=0.5012;CI95=0.5,0.5;DP4=0,1,1,0;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,23:2:0:0/1:26 | |
| 18178 chr11 73866083 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18179 chr11 73891501 . G C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 18180 chr11 73924806 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18181 chr11 73931682 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18182 chr11 73943959 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18183 chr11 73971479 . C CGTCTAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18184 chr11 73991010 . G T 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 18185 chr11 74002336 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18186 chr11 74026230 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18187 chr11 74031272 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18188 chr11 74034713 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18189 chr11 74036842 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18190 chr11 74039267 . G T 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18191 chr11 74041820 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18192 chr11 74047683 . A G 83 . DP=35;AF1=0.5;CI95=0.5,0.5;DP4=17,2,11,1;MQ=49;PV4=1,2.7e-07,1.4e-05,1 PL:DP:SP:GT:GQ 113,0,255:31:0:0/1:99 | |
| 18193 chr11 74049569 . A G 99 . DP=42;AF1=0.5;CI95=0.5,0.5;DP4=6,8,10,11;MQ=49;PV4=1,2.4e-09,0.0085,1 PL:DP:SP:GT:GQ 195,0,255:35:0:0/1:99 | |
| 18194 chr11 74053547 . C T 99 . DP=28;AF1=0.5;CI95=0.5,0.5;DP4=8,5,7,6;MQ=48;PV4=1,1.2e-08,5.3e-08,1 PL:DP:SP:GT:GQ 197,0,255:26:0:0/1:99 | |
| 18195 chr11 74070933 . a aGTGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18196 chr11 74079475 . A G 51 . DP=6;AF1=0.5002;CI95=0.5,0.5;DP4=1,0,5,0;MQ=47;PV4=1,0.031,0.26,1 PL:DP:SP:GT:GQ 81,0,32:6:0:0/1:35 | |
| 18197 chr11 74082693 . A G 34.5 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=47 PL:DP:SP:GT:GQ 67,12,0:4:0:1/1:72 | |
| 18198 chr11 74116967 . ta tAGAa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18199 chr11 74119256 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 18200 chr11 74148566 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18201 chr11 74168217 . T C 6.98 . DP=4;AF1=0.4999;CI95=0.5,0.5;DP4=2,0,2,0;MQ=48;PV4=1,0.24,0.0099,1 PL:DP:SP:GT:GQ 36,0,57:4:0:0/1:39 | |
| 18202 chr11 74173104 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18203 chr11 74174590 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18204 chr11 74176639 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18205 chr11 74192139 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18206 chr11 74243352 . t tCTGAGGAAAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18207 chr11 74245585 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18208 chr11 74250987 . C T 29.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=45 PL:DP:SP:GT:GQ 61,6,0:2:0:1/1:49 | |
| 18209 chr11 74252904 . ct cTAAt 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 18210 chr11 74257693 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18211 chr11 74263736 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18212 chr11 74270669 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 18213 chr11 74279050 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18214 chr11 74298355 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18215 chr11 74309194 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18216 chr11 74316393 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18217 chr11 74330980 . A G 37 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=11,0,7,0;MQ=49;PV4=1,9.6e-09,0.21,0.084 PL:DP:SP:GT:GQ 67,0,219:18:0:0/1:70 | |
| 18218 chr11 74337930 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18219 chr11 74349625 . C G 5.49 . DP=2;AF1=0.5049;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,17:2:0:0/1:20 | |
| 18220 chr11 74384665 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 18221 chr11 74390475 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18222 chr11 74391696 . T C 5.29 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 35,6,0:2:0:1/1:49 | |
| 18223 chr11 74402508 . T A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 18224 chr11 74407675 . A G 19.1 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=1,6,0,3;MQ=48;PV4=1,1,0.051,0.4 PL:DP:SP:GT:GQ 49,0,115:10:0:0/1:52 | |
| 18225 chr11 74407676 . C T 28 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=0,7,1,3;MQ=48;PV4=0.36,1,0.46,1 PL:DP:SP:GT:GQ 58,0,81:11:0:0/1:61 | |
| 18226 chr11 74408106 . G A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 18227 chr11 74414568 . AG AGTTG 3.25 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=1,2,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,104:4:0:0/1:41 | |
| 18228 chr11 74415606 . T C 99 . DP=30;AF1=0.5;CI95=0.5,0.5;DP4=1,11,2,12;MQ=46;PV4=1,0.00016,1.5e-15,1 PL:DP:SP:GT:GQ 254,0,255:26:0:0/1:99 | |
| 18229 chr11 74417523 . T C 29 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=7,4,4,0;MQ=47;PV4=0.52,0.27,4.6e-05,1 PL:DP:SP:GT:GQ 59,0,244:15:3:0/1:62 | |
| 18230 chr11 74417528 . T A 11.3 . DP=21;AF1=0.5;CI95=0.5,0.5;DP4=8,5,5,0;MQ=48;PV4=0.25,0.0096,0.00021,1 PL:DP:SP:GT:GQ 41,0,255:18:6:0/1:44 | |
| 18231 chr11 74417664 . T C 55 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=0,5,0,7;MQ=49;PV4=1,8.3e-08,0.036,0.31 PL:DP:SP:GT:GQ 85,0,150:12:0:0/1:88 | |
| 18232 chr11 74423254 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18233 chr11 74433516 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18234 chr11 74438023 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18235 chr11 74449740 . A G 46 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=3,2,0,5;MQ=49;PV4=0.17,7e-06,0.028,0.43 PL:DP:SP:GT:GQ 76,0,190:10:8:0/1:79 | |
| 18236 chr11 74487106 . gacttact gact 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18237 chr11 74500933 . CCTTT C 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 18238 chr11 74527819 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18239 chr11 74528884 . GT GTCT 5.08 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,1,1,0.05 PL:DP:SP:GT:GQ 41,0,78:3:0:0/1:44 | |
| 18240 chr11 74587724 . G T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18241 chr11 74598976 . ga gAGATa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18242 chr11 74605348 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18243 chr11 74605356 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18244 chr11 74633979 . G C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 18245 chr11 74656302 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18246 chr11 74686176 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18247 chr11 74695389 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18248 chr11 74712380 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18249 chr11 74720661 . TAC TACCCGAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18250 chr11 74722454 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18251 chr11 74727014 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18252 chr11 74754649 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18253 chr11 74757628 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18254 chr11 74780254 . T G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 18255 chr11 74787155 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18256 chr11 74790272 . A C 4.75 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=25 PL:DP:SP:GT:GQ 35,9,0:3:0:1/1:63 | |
| 18257 chr11 74800398 . CCA CCAAGAGCA 5.08 . INDEL;DP=17;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,1,1,0.42 PL:DP:SP:GT:GQ 41,0,55:3:0:0/1:44 | |
| 18258 chr11 74801955 . A C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 18259 chr11 74814027 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18260 chr11 74820318 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18261 chr11 74824713 . A T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 18262 chr11 74850112 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 18263 chr11 74853052 . AA AAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18264 chr11 74856702 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18265 chr11 74859251 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18266 chr11 74862863 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 18267 chr11 74869559 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18268 chr11 74873179 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 18269 chr11 74875335 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18270 chr11 74880737 . G T 23 . DP=21;AF1=0.5;CI95=0.5,0.5;DP4=1,2,5,2;MQ=48;PV4=0.5,0.00047,0.045,1 PL:DP:SP:GT:GQ 53,0,97:10:3:0/1:56 | |
| 18271 chr11 74880750 . CCTT C 44.5 . INDEL;DP=28;AF1=0.5;CI95=0.5,0.5;DP4=6,4,0,4;MQ=50;PV4=0.085,0.012,1,1 PL:DP:SP:GT:GQ 82,0,255:14:11:0/1:85 | |
| 18272 chr11 74881838 . G T 11.3 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 18273 chr11 74887040 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 18274 chr11 74889653 . cct c 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 18275 chr11 74898111 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18276 chr11 74904362 . T C 97 . DP=31;AF1=0.9999;CI95=0.5,1;DP4=0,2,7,3;MQ=48;PV4=0.15,1,0.089,1 PL:DP:SP:GT:GQ 127,3,0:12:8:1/1:41 | |
| 18277 chr11 74907272 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18278 chr11 74907721 . C T 17.1 . DP=10;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,5;MQ=50;PV4=1,0.011,0.29,1 PL:DP:SP:GT:GQ 47,0,37:7:0:0/1:40 | |
| 18279 chr11 74907900 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18280 chr11 74915342 . CCT CCTCT 3.25 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=3,0,1,0;MQ=50;PV4=1,1,1,0.39 PL:DP:SP:GT:GQ 38,0,90:4:0:0/1:41 | |
| 18281 chr11 74920353 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 18282 chr11 74922985 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 18283 chr11 74924225 . TCCTTCTGCC TCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18284 chr11 74924718 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18285 chr11 74953341 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18286 chr11 74967890 . aat a 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 18287 chr11 74968005 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18288 chr11 74976210 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18289 chr11 74984551 . ga gAa 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 18290 chr11 74989276 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18291 chr11 74989313 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18292 chr11 74995226 . G A 36 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=4,0,6,0;MQ=48;PV4=1,0.0011,0.34,1 PL:DP:SP:GT:GQ 66,0,101:10:0:0/1:69 | |
| 18293 chr11 74995350 . C T 4.13 . DP=29;AF1=0.4998;CI95=0.5,0.5;DP4=4,9,0,4;MQ=49;PV4=0.52,0.012,0.0032,1 PL:DP:SP:GT:GQ 32,0,255:17:3:0/1:35 | |
| 18294 chr11 75001740 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18295 chr11 75010635 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18296 chr11 75024591 . AG AGGGTG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18297 chr11 75026406 . C T 6.2 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,44:2:0:0/1:37 | |
| 18298 chr11 75032533 . AGAG AGAGTGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18299 chr11 75046146 . tc tCTATGc 7.42 . INDEL;DP=2;AF1=0.5101;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,14:2:0:0/1:17 | |
| 18300 chr11 75064455 . C A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 18301 chr11 75080682 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 18302 chr11 75084914 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18303 chr11 75088464 . G T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 18304 chr11 75112789 . T A 15.1 . DP=11;AF1=0.5001;CI95=0.5,0.5;DP4=0,2,0,2;MQ=48;PV4=1,1,0.21,1 PL:DP:SP:GT:GQ 45,0,32:4:0:0/1:35 | |
| 18305 chr11 75115820 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18306 chr11 75123650 . TAA T 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 18307 chr11 75143097 . g gCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18308 chr11 75152243 . C T 14.2 . DP=8;AF1=0.5;CI95=0.5,0.5;DP4=3,2,1,2;MQ=49;PV4=1,0.0033,0.11,1 PL:DP:SP:GT:GQ 44,0,185:8:0:0/1:47 | |
| 18309 chr11 75158280 . T C 4.77 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18310 chr11 75183980 . g gGTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18311 chr11 75186242 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18312 chr11 75189021 . t tGCA 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 18313 chr11 75206890 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18314 chr11 75209168 . G GCC 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,1,1,0.45 PL:DP:SP:GT:GQ 41,0,77:3:0:0/1:44 | |
| 18315 chr11 75218909 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18316 chr11 75220406 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18317 chr11 75224700 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18318 chr11 75239364 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18319 chr11 75248301 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18320 chr11 75250571 . T G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 18321 chr11 75270656 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18322 chr11 75276446 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 18323 chr11 75277876 . T C 4.13 . DP=7;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,3;MQ=43;PV4=1,0.0013,0.14,0.0068 PL:DP:SP:GT:GQ 32,0,40:4:0:0/1:34 | |
| 18324 chr11 75277881 . T A 10.4 . DP=7;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,2;MQ=48;PV4=1,1,0.02,0.059 PL:DP:SP:GT:GQ 40,0,50:5:0:0/1:43 | |
| 18325 chr11 75282882 . G A 54 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=2,7,1,8;MQ=49;PV4=1,6.2e-05,8.7e-06,0.24 PL:DP:SP:GT:GQ 84,0,241:18:0:0/1:87 | |
| 18326 chr11 75308361 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18327 chr11 75309099 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18328 chr11 75316829 . A G 11.3 . DP=13;AF1=0.5;CI95=0.5,0.5;DP4=3,0,4,0;MQ=50;PV4=1,0.12,1,1 PL:DP:SP:GT:GQ 41,0,36:7:0:0/1:38 | |
| 18329 chr11 75349890 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18330 chr11 75353709 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18331 chr11 75366153 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18332 chr11 75383611 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18333 chr11 75392822 . T G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 18334 chr11 75410605 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18335 chr11 75412208 . G GACACTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18336 chr11 75418574 . GTTC G 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18337 chr11 75428958 . A G 87 . DP=36;AF1=0.5;CI95=0.5,0.5;DP4=16,7,7,5;MQ=49;PV4=0.71,1.1e-10,0.0014,0.38 PL:DP:SP:GT:GQ 117,0,255:35:1:0/1:99 | |
| 18338 chr11 75430822 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18339 chr11 75433371 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18340 chr11 75455810 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18341 chr11 75461578 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18342 chr11 75483147 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 18343 chr11 75492474 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18344 chr11 75509875 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 18345 chr11 75526910 . G GAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18346 chr11 75581134 . C CCTTAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18347 chr11 75591362 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18348 chr11 75646786 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18349 chr11 75707719 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18350 chr11 75724951 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18351 chr11 75779693 . G GTCC 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 18352 chr11 75792596 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18353 chr11 75807240 . A ACT 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 18354 chr11 75820117 . ATTT A 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18355 chr11 75836641 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18356 chr11 75837674 . AATATAT AATATATAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18357 chr11 75850439 . c cGGGCGTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18358 chr11 75854544 . C CAT 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 18359 chr11 75864090 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18360 chr11 75865919 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18361 chr11 75867674 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18362 chr11 75879365 . ggccA g 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18363 chr11 75885321 . A G 25.8 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=46 PL:DP:SP:GT:GQ 57,6,0:2:0:1/1:49 | |
| 18364 chr11 75902468 . T A 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 18365 chr11 75907477 . A G 11.1 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=49 PL:DP:SP:GT:GQ 42,6,0:2:0:1/1:49 | |
| 18366 chr11 75938395 . T A 3.57 . DP=2;AF1=0.5048;CI95=0.5,0.5;DP4=1,0,1,0;MQ=37;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,17:2:0:0/1:20 | |
| 18367 chr11 75940994 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18368 chr11 75963360 . TGAGAGA TGAGA 49.2 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=50 PL:DP:SP:GT:GQ 88,6,0:2:0:1/1:49 | |
| 18369 chr11 75972035 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18370 chr11 75977088 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 18371 chr11 75983695 . TG TGG 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 18372 chr11 75995211 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18373 chr11 76010441 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18374 chr11 76020856 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 18375 chr11 76031135 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18376 chr11 76044278 . tc tCGAGACc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18377 chr11 76046500 . cc cCTc 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 18378 chr11 76049786 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18379 chr11 76090876 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18380 chr11 76116493 . CC CCTTC 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 18381 chr11 76119284 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18382 chr11 76119866 . A ACG 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 18383 chr11 76158888 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 18384 chr11 76161468 . T TGAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18385 chr11 76166760 . TTAT TT 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 18386 chr11 76166987 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 18387 chr11 76184011 . G A 23 . DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,2;MQ=46;PV4=1,0.12,0.14,0.15 PL:DP:SP:GT:GQ 53,0,41:3:0:0/1:44 | |
| 18388 chr11 76186212 . C CTTGTGGTGT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 18389 chr11 76200646 . A C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 18390 chr11 76213635 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 18391 chr11 76237725 . CAA CA 50.5 . INDEL;DP=16;AF1=0.5;CI95=0.5,0.5;DP4=0,8,0,7;MQ=50;PV4=1,4.7e-05,1,1 PL:DP:SP:GT:GQ 88,0,135:15:0:0/1:91 | |
| 18392 chr11 76245074 . GA GATCTATA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18393 chr11 76248802 . AATA AATATA 12.7 . INDEL;DP=8;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18394 chr11 76248804 . T C 10.2 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=42 PL:DP:SP:GT:GQ 41,6,0:2:0:1/1:49 | |
| 18395 chr11 76252833 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18396 chr11 76258602 . A C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 18397 chr11 76260513 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18398 chr11 76275823 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18399 chr11 76290615 . GT GTTCAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18400 chr11 76298776 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18401 chr11 76299844 . CCCAGTAT C 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18402 chr11 76302114 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18403 chr11 76309070 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18404 chr11 76334029 . A T 4.61 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=45 PL:DP:SP:GT:GQ 34,6,0:2:0:1/1:49 | |
| 18405 chr11 76334037 . C G 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,41:2:0:0/1:35 | |
| 18406 chr11 76346302 . C T 6.33 . DP=2;AF1=0.5206;CI95=0.5,1;DP4=0,1,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,11:2:0:0/1:14 | |
| 18407 chr11 76351977 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18408 chr11 76352908 . T C 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 18409 chr11 76353493 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18410 chr11 76372052 . A G 15.9 . DP=13;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 47,6,0:2:0:1/1:49 | |
| 18411 chr11 76372564 . T C 46.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=43 PL:DP:SP:GT:GQ 78,6,0:2:0:1/1:49 | |
| 18412 chr11 76378022 . A G 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 18413 chr11 76383051 . t tTTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18414 chr11 76385569 . G T 9.53 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 18415 chr11 76396585 . T A 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 18416 chr11 76396828 . T G 11.1 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=39 PL:DP:SP:GT:GQ 42,6,0:2:0:1/1:49 | |
| 18417 chr11 76400025 . C G 12 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=45 PL:DP:SP:GT:GQ 43,6,0:2:0:1/1:49 | |
| 18418 chr11 76415214 . ATCTGACAG A 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18419 chr11 76423630 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18420 chr11 76425737 . T A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 18421 chr11 76430987 . C CTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18422 chr11 76432774 . TGG TGGGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18423 chr11 76435413 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18424 chr11 76439858 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18425 chr11 76441425 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18426 chr11 76454890 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18427 chr11 76457428 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18428 chr11 76465362 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18429 chr11 76467903 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18430 chr11 76470532 . A ATTTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18431 chr11 76476969 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 18432 chr11 76477244 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 18433 chr11 76481328 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18434 chr11 76496290 . GTGGT G 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18435 chr11 76505796 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18436 chr11 76506572 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 18437 chr11 76506888 . G A 8.64 . DP=33;AF1=0.5;CI95=0.5,0.5;DP4=0,13,1,6;MQ=50;PV4=0.35,1.8e-05,0.022,0.27 PL:DP:SP:GT:GQ 38,0,220:20:0:0/1:41 | |
| 18438 chr11 76508159 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18439 chr11 76509494 . CCTGTCT CCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18440 chr11 76509522 . T C 13.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 18441 chr11 76536475 . A G 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 18442 chr11 76540683 . G A 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 18443 chr11 76554370 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18444 chr11 76573340 . AA AAGTAGAGGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18445 chr11 76574326 . C CGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18446 chr11 76575190 . A C 10.2 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 41,6,0:2:0:1/1:49 | |
| 18447 chr11 76611322 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18448 chr11 76614987 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18449 chr11 76627577 . GTT GT 17.3 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=50 PL:DP:SP:GT:GQ 56,6,0:2:0:1/1:49 | |
| 18450 chr11 76637699 . T G 14.2 . DP=24;AF1=0.5003;CI95=0.5,0.5;DP4=1,1,0,6;MQ=48;PV4=0.25,0.29,0.053,1 PL:DP:SP:GT:GQ 44,0,29:8:0:0/1:32 | |
| 18451 chr11 76657672 . t tGTGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18452 chr11 76657735 . c cTGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18453 chr11 76671609 . g gTGT 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 18454 chr11 76694041 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18455 chr11 76728618 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18456 chr11 76731087 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 18457 chr11 76736915 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18458 chr11 76753580 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18459 chr11 76757891 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18460 chr11 76758592 . G C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 18461 chr11 76765169 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18462 chr11 76767261 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18463 chr11 76771765 . ctct c 6.56 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 18464 chr11 76774647 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 18465 chr11 76781729 . G C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 18466 chr11 76799577 . G GTTT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 18467 chr11 76812449 . T A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 18468 chr11 76813198 . A T 23.8 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 55,6,0:2:0:1/1:49 | |
| 18469 chr11 76827360 . A G 76 . DP=13;AF1=1;CI95=1,1;DP4=0,0,0,12;MQ=48 PL:DP:SP:GT:GQ 109,36,0:12:0:1/1:99 | |
| 18470 chr11 76830224 . T A 6.2 . DP=2;AF1=0.5002;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,30:2:0:0/1:32 | |
| 18471 chr11 76830316 . G A 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 18472 chr11 76834712 . A G 37 . DP=13;AF1=0.5;CI95=0.5,0.5;DP4=7,0,5,0;MQ=49;PV4=1,0.00032,0.003,1 PL:DP:SP:GT:GQ 67,0,180:12:0:0/1:70 | |
| 18473 chr11 76855086 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18474 chr11 76857548 . G A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 18475 chr11 76866020 . T C 7.97 . DP=2;AF1=0.5263;CI95=0.5,1;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,10:2:0:0/1:13 | |
| 18476 chr11 76866145 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 18477 chr11 76874168 . a aAAATTTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18478 chr11 76903033 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18479 chr11 76905856 . A T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 18480 chr11 76913959 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18481 chr11 76924449 . A T 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18482 chr11 76929034 . tattaattaatt tattaatt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18483 chr11 76938983 . A G 52 . DP=21;AF1=0.5;CI95=0.5,0.5;DP4=0,9,0,9;MQ=49;PV4=1,2.7e-05,8.1e-15,1 PL:DP:SP:GT:GQ 82,0,192:18:0:0/1:85 | |
| 18484 chr11 76954937 . C A 4.13 . DP=19;AF1=0.4998;CI95=0.5,0.5;DP4=0,6,0,3;MQ=49;PV4=1,0.00023,0.043,0.26 PL:DP:SP:GT:GQ 32,0,173:9:0:0/1:35 | |
| 18485 chr11 76971403 . c cGAA 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 18486 chr11 76979900 . C G 52.1 . DP=8;AF1=1;CI95=1,1;DP4=0,0,7,0;MQ=49 PL:DP:SP:GT:GQ 85,21,0:7:0:1/1:84 | |
| 18487 chr11 76991992 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18488 chr11 77006122 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18489 chr11 77009915 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18490 chr11 77032996 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18491 chr11 77047316 . AT ATGTT 3.25 . INDEL;DP=8;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,1;MQ=50;PV4=1,1,1,0.21 PL:DP:SP:GT:GQ 38,0,81:4:0:0/1:41 | |
| 18492 chr11 77049924 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 18493 chr11 77055972 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18494 chr11 77057529 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18495 chr11 77116103 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18496 chr11 77116108 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18497 chr11 77124023 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 18498 chr11 77147106 . CTATA CTA 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 18499 chr11 77151628 . t tTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18500 chr11 77185926 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18501 chr11 77211078 . T TGCAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18502 chr11 77213788 . C T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 18503 chr11 77214428 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18504 chr11 77226811 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18505 chr11 77248069 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 18506 chr11 77253853 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18507 chr11 77259729 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18508 chr11 77259737 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18509 chr11 77262090 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18510 chr11 77283687 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18511 chr11 77311535 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18512 chr11 77314503 . A G 6.98 . DP=5;AF1=0.4999;CI95=0.5,0.5;DP4=3,0,2,0;MQ=47;PV4=1,0.061,0.022,1 PL:DP:SP:GT:GQ 36,0,99:5:0:0/1:39 | |
| 18513 chr11 77335982 . C A 23.5 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=50 PL:DP:SP:GT:GQ 56,12,0:4:0:1/1:72 | |
| 18514 chr11 77340962 . A C 3.02 . DP=13;AF1=0.5004;CI95=0.5,0.5;DP4=0,2,0,2;MQ=46;PV4=1,1,0.23,0.36 PL:DP:SP:GT:GQ 30,0,26:4:0:0/1:28 | |
| 18515 chr11 77361431 . tcc tGTACGCGGcc 5.8 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 18516 chr11 77378388 . T C 13.2 . DP=32;AF1=0.5;CI95=0.5,0.5;DP4=10,16,3,2;MQ=49;PV4=0.63,1.1e-05,2.1e-08,1 PL:DP:SP:GT:GQ 43,0,255:31:2:0/1:46 | |
| 18517 chr11 77378505 . A G 99 . DP=38;AF1=0.5;CI95=0.5,0.5;DP4=5,15,5,6;MQ=48;PV4=0.42,0.24,2.5e-15,1 PL:DP:SP:GT:GQ 210,0,255:31:4:0/1:99 | |
| 18518 chr11 77384358 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 18519 chr11 77402267 . T G 5.46 . DP=13;AF1=0.4999;CI95=0.5,0.5;DP4=4,2,0,4;MQ=48;PV4=0.076,0.075,1,0.49 PL:DP:SP:GT:GQ 34,0,148:10:11:0/1:37 | |
| 18520 chr11 77409568 . T C 99 . DP=67;AF1=0.5;CI95=0.5,0.5;DP4=16,16,18,13;MQ=48;PV4=0.62,7.3e-18,9.1e-16,1 PL:DP:SP:GT:GQ 233,0,255:63:2:0/1:99 | |
| 18521 chr11 77429953 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18522 chr11 77430184 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18523 chr11 77445508 . A G 3.01 . DP=9;AF1=0.4997;CI95=0.5,0.5;DP4=3,2,2,0;MQ=38;PV4=1,0.39,1,1 PL:DP:SP:GT:GQ 30,0,76:7:0:0/1:33 | |
| 18524 chr11 77448835 . T TCTCTTTCTTGC 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18525 chr11 77482927 . ct cTAt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18526 chr11 77484233 . T G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 18527 chr11 77496692 . T G 6.98 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18528 chr11 77511646 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 18529 chr11 77537371 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18530 chr11 77537665 . acact aCACTTcact 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18531 chr11 77553638 . T C 48 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=7,5,4,0;MQ=49;PV4=0.24,0.018,7e-05,1 PL:DP:SP:GT:GQ 78,0,255:16:6:0/1:81 | |
| 18532 chr11 77581802 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18533 chr11 77590604 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18534 chr11 77593735 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18535 chr11 77612269 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18536 chr11 77617403 . C CAGTCTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18537 chr11 77632462 . G A 33 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=1,1,0,3;MQ=47;PV4=0.4,0.17,0.073,1 PL:DP:SP:GT:GQ 63,0,64:5:0:0/1:63 | |
| 18538 chr11 77632473 . T G 5.54 . DP=17;AF1=0.5128;CI95=0.5,0.5;DP4=1,0,0,2;MQ=48;PV4=0.33,1,1,1 PL:DP:SP:GT:GQ 34,0,13:3:0:0/1:16 | |
| 18539 chr11 77633412 . A G 7.81 . DP=2;AF1=0.5019;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,21:2:0:0/1:24 | |
| 18540 chr11 77644265 . T G 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,40:2:0:0/1:33 | |
| 18541 chr11 77646158 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18542 chr11 77649847 . C CTG 4.42 . INDEL;DP=6;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,1,1,0.05 PL:DP:SP:GT:GQ 40,0,71:3:0:0/1:43 | |
| 18543 chr11 77671281 . A G 24 . DP=5;AF1=0.5;CI95=0.5,0.5;DP4=1,0,3,0;MQ=48;PV4=1,0.0058,0.16,1 PL:DP:SP:GT:GQ 54,0,38:4:0:0/1:41 | |
| 18544 chr11 77676493 . c cGA 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 18545 chr11 77677267 . tt tTCt 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 18546 chr11 77706230 . GCCACC GC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18547 chr11 77717557 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18548 chr11 77721760 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18549 chr11 77731778 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18550 chr11 77739125 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 18551 chr11 77747296 . T TTTGACTTCTGGTTGA 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 18552 chr11 77775466 . C G 48.5 . DP=9;AF1=0.5718;CI95=0.5,1;DP4=0,1,0,7;MQ=49;PV4=1,0.078,0.21,1 PL:DP:SP:GT:GQ 78,0,6:8:0:0/1:8 | |
| 18553 chr11 77783235 . a aGAGTGAGTGTGAACTGAC 7.35 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=48 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 18554 chr11 77788971 . AA AACTCACAGCA 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=48 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 18555 chr11 77804324 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18556 chr11 77807269 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18557 chr11 77811990 . T C 83 . DP=9;AF1=1;CI95=1,1;DP4=0,0,9,0;MQ=48 PL:DP:SP:GT:GQ 116,27,0:9:0:1/1:99 | |
| 18558 chr11 77815099 . C CGAGA 3.25 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,1;MQ=50;PV4=1,1,1,0.16 PL:DP:SP:GT:GQ 38,0,114:4:0:0/1:41 | |
| 18559 chr11 77816533 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18560 chr11 77836049 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18561 chr11 77872376 . CAAG CAAGAAAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18562 chr11 77874103 . a aCTGAGAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18563 chr11 77884575 . ACTCT A 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 18564 chr11 77884782 . C T 6.22 . DP=17;AF1=0.5039;CI95=0.5,0.5;DP4=1,0,2,0;MQ=48;PV4=1,0.28,0.26,1 PL:DP:SP:GT:GQ 35,0,18:3:0:0/1:21 | |
| 18565 chr11 77887065 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18566 chr11 77897089 . GCCAC GCCACCAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18567 chr11 77914555 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18568 chr11 77921527 . G C 3.04 . DP=28;AF1=0.5061;CI95=0.5,0.5;DP4=1,0,0,3;MQ=50;PV4=0.25,0.051,1,1 PL:DP:SP:GT:GQ 30,0,16:4:0:0/1:19 | |
| 18569 chr11 77921834 . G GAC 7.35 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 18570 chr11 77926843 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18571 chr11 77927101 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18572 chr11 77934273 . t tCG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,42:2:0:0/1:43 | |
| 18573 chr11 77936890 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 18574 chr11 77938134 . A T 7.8 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18575 chr11 77964526 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18576 chr11 77989066 . TT TTTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18577 chr11 78022891 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18578 chr11 78037824 . C G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 18579 chr11 78051031 . G C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 18580 chr11 78058335 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18581 chr11 78066560 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18582 chr11 78096466 . GT GTGAT 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,2,1,0;MQ=50;PV4=0.33,1,1,0.3 PL:DP:SP:GT:GQ 41,0,83:3:0:0/1:44 | |
| 18583 chr11 78105879 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 18584 chr11 78108692 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18585 chr11 78116711 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18586 chr11 78143892 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18587 chr11 78148630 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18588 chr11 78150592 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18589 chr11 78152117 . A C 4.77 . DP=23;AF1=0.4999;CI95=0.5,0.5;DP4=2,4,2,3;MQ=49;PV4=1,0.021,0.012,0.5 PL:DP:SP:GT:GQ 33,0,157:11:0:0/1:36 | |
| 18590 chr11 78157191 . T TCCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18591 chr11 78173228 . A AATTCTGCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18592 chr11 78177394 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18593 chr11 78180824 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18594 chr11 78188980 . acac aCACCcac 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18595 chr11 78195487 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18596 chr11 78204073 . CACAGATAC CAC 25.5 . INDEL;DP=13;AF1=0.5;CI95=0.5,0.5;DP4=8,0,2,0;MQ=50;PV4=1,0.14,1,1 PL:DP:SP:GT:GQ 63,0,200:10:0:0/1:66 | |
| 18597 chr11 78209438 . G T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 18598 chr11 78232178 . A G 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18599 chr11 78232183 . A C 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18600 chr11 78232308 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18601 chr11 78232445 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18602 chr11 78243413 . a aGCAGCTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18603 chr11 78244061 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18604 chr11 78250631 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18605 chr11 78257406 . cca cCAGTca 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18606 chr11 78261367 . G A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 18607 chr11 78273641 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 18608 chr11 78274169 . T G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 18609 chr11 78277119 . gttttt gt 5.08 . INDEL;DP=8;AF1=0.5;CI95=0.5,0.5;DP4=1,1,1,0;MQ=50;PV4=1,1,1,0.31 PL:DP:SP:GT:GQ 41,0,47:3:0:0/1:43 | |
| 18610 chr11 78277122 . t tCAACC 5.08 . INDEL;DP=7;AF1=0.5;CI95=0.5,0.5;DP4=1,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,61:3:0:0/1:44 | |
| 18611 chr11 78277988 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18612 chr11 78286954 . ct cTCTt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18613 chr11 78295864 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 18614 chr11 78300484 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18615 chr11 78325553 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18616 chr11 78354933 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 18617 chr11 78355971 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 18618 chr11 78356080 . t tAGAAGGGCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18619 chr11 78371851 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18620 chr11 78373824 . GAG GAGCTGTAG 3.81 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 18621 chr11 78438155 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18622 chr11 78446746 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 18623 chr11 78454549 . A AGCC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 18624 chr11 78463123 . A C 3.01 . DP=4;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,2,0;MQ=49;PV4=1,0.026,0.33,0.43 PL:DP:SP:GT:GQ 30,0,41:3:0:0/1:33 | |
| 18625 chr11 78476481 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18626 chr11 78498340 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18627 chr11 78525917 . T TTGCTCC 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18628 chr11 78527955 . ttagta tta 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18629 chr11 78533049 . c cCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18630 chr11 78541058 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18631 chr11 78544233 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18632 chr11 78550653 . cct cCTGGTct 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18633 chr11 78557051 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18634 chr11 78594027 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18635 chr11 78606966 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18636 chr11 78606970 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18637 chr11 78610578 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18638 chr11 78619688 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18639 chr11 78648427 . g gATA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18640 chr11 78655499 . GT GTCTTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18641 chr11 78658506 . CAGAAG CAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18642 chr11 78667343 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18643 chr11 78678771 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18644 chr11 78684046 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 18645 chr11 78697235 . C A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 18646 chr11 78736235 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18647 chr11 78741954 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18648 chr11 78746311 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18649 chr11 78747285 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 18650 chr11 78765893 . tgg t 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 18651 chr11 78813633 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18652 chr11 78816405 . C CGACG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18653 chr11 78826936 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18654 chr11 78831773 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18655 chr11 78844155 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18656 chr11 78866252 . C A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18657 chr11 78875290 . a aCGGAACAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18658 chr11 78884274 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 18659 chr11 78926708 . G T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18660 chr11 78929950 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 18661 chr11 78930825 . ATCA ATCACTCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18662 chr11 78931769 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18663 chr11 78937063 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18664 chr11 78938088 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 18665 chr11 78945534 . AGG AGGG 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 18666 chr11 78951053 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18667 chr11 78977873 . G A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 18668 chr11 78982832 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18669 chr11 78991523 . G A 3.01 . DP=3;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,0,2;MQ=50;PV4=0.33,0.013,0.33,0.05 PL:DP:SP:GT:GQ 30,0,41:3:0:0/1:33 | |
| 18670 chr11 79038073 . C G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 18671 chr11 79039635 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18672 chr11 79040364 . C T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 18673 chr11 79040411 . att aTTATtt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18674 chr11 79085126 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18675 chr11 79087434 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18676 chr11 79133157 . C G 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18677 chr11 79134821 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18678 chr11 79141880 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18679 chr11 79152279 . t tGCCACGTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18680 chr11 79152653 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 18681 chr11 79153267 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18682 chr11 79169192 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 18683 chr11 79174831 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18684 chr11 79203467 . TC TCGACTGCTAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18685 chr11 79204809 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18686 chr11 79207175 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18687 chr11 79212835 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18688 chr11 79245270 . A C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 18689 chr11 79256637 . a aGGAAACACAC 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18690 chr11 79258272 . ca cAAAGACGa 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 18691 chr11 79288730 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18692 chr11 79291212 . GCCTC GCCTCCCTC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 18693 chr11 79303344 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18694 chr11 79306179 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18695 chr11 79309535 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18696 chr11 79309556 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18697 chr11 79318180 . T TTCTGCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18698 chr11 79322998 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18699 chr11 79337338 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18700 chr11 79350009 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18701 chr11 79351635 . AG AGGCTTCG 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 18702 chr11 79354757 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18703 chr11 79363632 . g gACGCCCTCGT 8 . INDEL;DP=2;AF1=0.6243;CI95=0.5,1;DP4=0,1,1,0;MQ=36;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,4:2:0:0/1:6 | |
| 18704 chr11 79365368 . CT CTGTAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18705 chr11 79369666 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18706 chr11 79387377 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18707 chr11 79388395 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18708 chr11 79450190 . tg tGACg 7.35 . INDEL;DP=2;AF1=0.5001;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,32:2:0:0/1:35 | |
| 18709 chr11 79451193 . C CTAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18710 chr11 79471283 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18711 chr11 79477008 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18712 chr11 79504295 . C G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 18713 chr11 79516347 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18714 chr11 79528975 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18715 chr11 79554116 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18716 chr11 79565014 . CTA C 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 18717 chr11 79568207 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18718 chr11 79571619 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18719 chr11 79572434 . CA CACGCTACTCAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18720 chr11 79632345 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18721 chr11 79658295 . ta tACa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18722 chr11 79659748 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18723 chr11 79660121 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18724 chr11 79676224 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18725 chr11 79690302 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18726 chr11 79699867 . GCA GCACA 99 . INDEL;DP=20;AF1=0.5;CI95=0.5,0.5;DP4=6,4,3,3;MQ=50;PV4=1,1,1,0.035 PL:DP:SP:GT:GQ 210,0,255:16:0:0/1:99 | |
| 18727 chr11 79700145 . A G 46.8 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=43 PL:DP:SP:GT:GQ 78,6,0:2:0:1/1:49 | |
| 18728 chr11 79700406 . AT ATGGT 3.25 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,1;MQ=50;PV4=1,1,1,0.076 PL:DP:SP:GT:GQ 38,0,114:4:0:0/1:41 | |
| 18729 chr11 79708908 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18730 chr11 79708910 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18731 chr11 79716056 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18732 chr11 79717458 . T C 87 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,1;MQ=42 PL:DP:SP:GT:GQ 119,9,0:3:0:1/1:63 | |
| 18733 chr11 79734802 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 18734 chr11 79763895 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 18735 chr11 79801098 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18736 chr11 79806241 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18737 chr11 79836691 . A C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 18738 chr11 79840582 . T TCAGGTCGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18739 chr11 79843334 . A C 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18740 chr11 79850926 . A ACT 7.35 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 18741 chr11 79855970 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18742 chr11 79930077 . G T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 18743 chr11 79932226 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18744 chr11 79953630 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18745 chr11 79988534 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18746 chr11 79991592 . ccccttacatcccttacatc ccccttacatc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18747 chr11 79993535 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18748 chr11 79998005 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18749 chr11 80014213 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18750 chr11 80020094 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 18751 chr11 80026666 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18752 chr11 80027214 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18753 chr11 80030488 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18754 chr11 80087898 . T G 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18755 chr11 80096074 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18756 chr11 80111585 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 18757 chr11 80126229 . GT GTGATGTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18758 chr11 80131249 . A C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 18759 chr11 80135324 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18760 chr11 80141823 . G GTCAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18761 chr11 80151179 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18762 chr11 80153039 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18763 chr11 80164916 . A C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 18764 chr11 80168760 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18765 chr11 80203454 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18766 chr11 80226010 . C A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 18767 chr11 80227917 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18768 chr11 80234239 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18769 chr11 80240540 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18770 chr11 80261445 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18771 chr11 80269237 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18772 chr11 80286916 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18773 chr11 80291965 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18774 chr11 80312315 . t tCCGC 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18775 chr11 80349579 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18776 chr11 80356762 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 18777 chr11 80364374 . T TATG 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,1,1,0.44 PL:DP:SP:GT:GQ 41,0,57:3:0:0/1:44 | |
| 18778 chr11 80364767 . C CATT 99 . INDEL;DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=50 PL:DP:SP:GT:GQ 141,12,0:4:0:1/1:72 | |
| 18779 chr11 80448583 . C A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 18780 chr11 80452666 . CAGG C 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18781 chr11 80466385 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18782 chr11 80475655 . G T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18783 chr11 80487607 . tag t 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 18784 chr11 80495726 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18785 chr11 80495846 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 18786 chr11 80505345 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18787 chr11 80507684 . gaaaaaa gaaa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18788 chr11 80520026 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18789 chr11 80524929 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18790 chr11 80538917 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18791 chr11 80553757 . G GGC 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 18792 chr11 80575169 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18793 chr11 80602799 . t tG 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 18794 chr11 80605909 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 18795 chr11 80610772 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18796 chr11 80618272 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 18797 chr11 80620005 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 18798 chr11 80621124 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18799 chr11 80624981 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18800 chr11 80631845 . G T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18801 chr11 80645807 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18802 chr11 80648604 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18803 chr11 80648706 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18804 chr11 80659822 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18805 chr11 80670689 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18806 chr11 80703305 . CT CTTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18807 chr11 80714844 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18808 chr11 80764084 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18809 chr11 80775113 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 18810 chr11 80780054 . G A 4.61 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=50 PL:DP:SP:GT:GQ 34,6,0:2:0:1/1:49 | |
| 18811 chr11 80796645 . gt gTTt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18812 chr11 80804796 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18813 chr11 80812399 . C CGG 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 18814 chr11 80887976 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18815 chr11 80897314 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18816 chr11 80899468 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18817 chr11 80903320 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18818 chr11 80930725 . A C 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18819 chr11 80936744 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18820 chr11 80994050 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18821 chr11 81007014 . CATAATATAA CATAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18822 chr11 81008221 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 18823 chr11 81009078 . G A 12 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=44 PL:DP:SP:GT:GQ 43,6,0:2:0:1/1:49 | |
| 18824 chr11 81009088 . T G 13 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=44 PL:DP:SP:GT:GQ 44,6,0:2:0:1/1:49 | |
| 18825 chr11 81068541 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18826 chr11 81070858 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18827 chr11 81102998 . TA TACCAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18828 chr11 81112243 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18829 chr11 81145906 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18830 chr11 81175695 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18831 chr11 81177319 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18832 chr11 81192441 . T G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 18833 chr11 81288068 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18834 chr11 81297740 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18835 chr11 81313527 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18836 chr11 81314937 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18837 chr11 81316251 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18838 chr11 81327905 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18839 chr11 81425314 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18840 chr11 81431131 . at aTCCCt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18841 chr11 81447873 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18842 chr11 81459868 . ct cTGGGt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18843 chr11 81524483 . CT CTGCAT 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18844 chr11 81540064 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18845 chr11 81568064 . C G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 18846 chr11 81576211 . A T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 18847 chr11 81576670 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18848 chr11 81609118 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18849 chr11 81615819 . G C 5.46 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,44:2:0:0/1:37 | |
| 18850 chr11 81620490 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18851 chr11 81624940 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18852 chr11 81633070 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18853 chr11 81676130 . GGT GGTGT 4.42 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 40,0,44:2:0:0/1:42 | |
| 18854 chr11 81678582 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18855 chr11 81681140 . TA TAGACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18856 chr11 81686101 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18857 chr11 81725876 . acttc a 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 18858 chr11 81727275 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18859 chr11 81770338 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18860 chr11 81798555 . aa aACGCa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18861 chr11 81828102 . T TCGGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18862 chr11 81859920 . G GTCCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18863 chr11 81885949 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18864 chr11 81885966 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18865 chr11 81927415 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18866 chr11 81948535 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18867 chr11 81949026 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18868 chr11 81950040 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18869 chr11 81954268 . ct cTTTt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18870 chr11 81958835 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18871 chr11 81974652 . T G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 18872 chr11 82005553 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18873 chr11 82050621 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18874 chr11 82065827 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18875 chr11 82069363 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18876 chr11 82093547 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18877 chr11 82111997 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18878 chr11 82113871 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18879 chr11 82118450 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18880 chr11 82139764 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18881 chr11 82187798 . ag aGGGg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18882 chr11 82196385 . TG TGTCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18883 chr11 82198699 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18884 chr11 82206768 . ct cTGAAt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18885 chr11 82239746 . T TCCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18886 chr11 82267697 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18887 chr11 82269282 . C CTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18888 chr11 82278585 . CAAAA CAAAAA 7.15 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=50 PL:DP:SP:GT:GQ 45,6,0:2:0:1/1:49 | |
| 18889 chr11 82279209 . C G 3.03 . DP=2;AF1=0.5029;CI95=0.5,0.5;DP4=1,0,0,1;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,19:2:0:0/1:22 | |
| 18890 chr11 82313178 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18891 chr11 82375678 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18892 chr11 82390590 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18893 chr11 82405530 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18894 chr11 82408353 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18895 chr11 82420425 . c cTTA 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 18896 chr11 82421644 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 18897 chr11 82440900 . gc gCAc 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 18898 chr11 82448674 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18899 chr11 82466271 . tg tGGg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18900 chr11 82484728 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18901 chr11 82490003 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18902 chr11 82498721 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18903 chr11 82526753 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 18904 chr11 82549422 . A C 6.2 . DP=16;AF1=0.4999;CI95=0.5,0.5;DP4=3,2,3,0;MQ=49;PV4=0.46,0.2,0.021,1 PL:DP:SP:GT:GQ 35,0,110:8:3:0/1:38 | |
| 18905 chr11 82560312 . T G 63 . DP=16;AF1=1;CI95=1,1;DP4=0,0,0,9;MQ=49 PL:DP:SP:GT:GQ 96,27,0:9:0:1/1:99 | |
| 18906 chr11 82560858 . A G 12.3 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 18907 chr11 82561339 . G A 99 . DP=24;AF1=1;CI95=1,1;DP4=1,0,18,0;MQ=46;PV4=1,1,0.0045,1 PL:DP:SP:GT:GQ 135,35,0:19:0:1/1:99 | |
| 18908 chr11 82561432 . A G 3.01 . DP=16;AF1=0.4997;CI95=0.5,0.5;DP4=2,2,0,3;MQ=49;PV4=0.43,0.06,0.097,1 PL:DP:SP:GT:GQ 30,0,102:7:4:0/1:33 | |
| 18909 chr11 82561591 . A T 32.5 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=48 PL:DP:SP:GT:GQ 65,12,0:4:0:1/1:72 | |
| 18910 chr11 82562570 . C G 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18911 chr11 82562925 . C A 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 18912 chr11 82577751 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18913 chr11 82578641 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18914 chr11 82582671 . G GGCCC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 18915 chr11 82601171 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18916 chr11 82619412 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18917 chr11 82625311 . gttt gt 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 18918 chr11 82641364 . G C 93.3 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=45 PL:DP:SP:GT:GQ 126,15,0:5:0:1/1:75 | |
| 18919 chr11 82643395 . T C 4.13 . DP=8;AF1=0.4998;CI95=0.5,0.5;DP4=2,2,0,3;MQ=50;PV4=0.43,0.088,0.031,0.42 PL:DP:SP:GT:GQ 32,0,111:7:4:0/1:35 | |
| 18920 chr11 82644764 . C G 3.54 . DP=21;AF1=0.4998;CI95=0.5,0.5;DP4=3,6,2,2;MQ=50;PV4=1,0.0029,0.28,0.47 PL:DP:SP:GT:GQ 31,0,255:13:0:0/1:34 | |
| 18921 chr11 82644904 . G A 99 . DP=27;AF1=1;CI95=1,1;DP4=1,0,11,8;MQ=47;PV4=1,1,0.18,1 PL:DP:SP:GT:GQ 255,40,0:20:0:1/1:99 | |
| 18922 chr11 82656118 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18923 chr11 82687634 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18924 chr11 82689013 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18925 chr11 82708831 . CT CTTTGCTAGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18926 chr11 82713612 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18927 chr11 82715718 . A T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 18928 chr11 82720435 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18929 chr11 82732974 . TCTTG TCTTGCTTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18930 chr11 82746379 . T TCATGTG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 18931 chr11 82746548 . T G 3.78 . DP=3;AF1=0.5552;CI95=0.5,1;DP4=0,1,0,2;MQ=47;PV4=1,1,0.29,0.49 PL:DP:SP:GT:GQ 31,0,7:3:0:0/1:10 | |
| 18932 chr11 82760504 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18933 chr11 82760512 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18934 chr11 82789544 . T TCGAATATACTTCGAC 52.2 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=50 PL:DP:SP:GT:GQ 91,6,0:2:0:1/1:49 | |
| 18935 chr11 82791759 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18936 chr11 82804119 . C T 6.98 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,44:2:0:0/1:38 | |
| 18937 chr11 82807900 . g gCCGCT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 18938 chr11 82843528 . T TCA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 18939 chr11 82905667 . C CTACACTCA 12.7 . INDEL;DP=12;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18940 chr11 82917225 . T A,C 7.5 . DP=17;AF1=0.5939;CI95=0.5,1;DP4=0,1,0,4;MQ=48;PV4=1,1,0.17,1 PL:DP:SP:GT:GQ 42,6,28,11,0,39:5:0:0/1:7 | |
| 18941 chr11 82918408 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18942 chr11 82920188 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 18943 chr11 82935873 . t tGC 6.55 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 43,0,44:2:0:0/1:43 | |
| 18944 chr11 82935963 . C T 52 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=3,3,4,3;MQ=49;PV4=1,0.00024,0.3,1 PL:DP:SP:GT:GQ 82,0,188:13:0:0/1:85 | |
| 18945 chr11 82938790 . T G 7.8 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=5,2,1,2;MQ=48;PV4=0.5,0.23,0.03,0.089 PL:DP:SP:GT:GQ 37,0,131:10:3:0/1:40 | |
| 18946 chr11 82948401 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18947 chr11 82952589 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18948 chr11 82971443 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18949 chr11 82973004 . C T 30.3 . DP=11;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=50 PL:DP:SP:GT:GQ 63,15,0:5:0:1/1:75 | |
| 18950 chr11 82973045 . C T 25 . DP=13;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=48 PL:DP:SP:GT:GQ 57,9,0:3:0:1/1:63 | |
| 18951 chr11 82976927 . TC TCGAC 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18952 chr11 82980328 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18953 chr11 82985664 . A T 6.22 . DP=4;AF1=0.5031;CI95=0.5,0.5;DP4=1,0,3,0;MQ=48;PV4=1,0.037,0.029,0.079 PL:DP:SP:GT:GQ 35,0,19:4:0:0/1:22 | |
| 18954 chr11 83003914 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18955 chr11 83008809 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18956 chr11 83030452 . A G 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 18957 chr11 83038391 . G A 6.98 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 18958 chr11 83048448 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18959 chr11 83055007 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=47 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18960 chr11 83074379 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18961 chr11 83085900 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18962 chr11 83119580 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18963 chr11 83154975 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18964 chr11 83160786 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18965 chr11 83169025 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18966 chr11 83211816 . A G 6.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18967 chr11 83255725 . C G 39.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=45 PL:DP:SP:GT:GQ 71,6,0:2:0:1/1:49 | |
| 18968 chr11 83261363 . C CCTTCGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18969 chr11 83269787 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18970 chr11 83272633 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 18971 chr11 83276818 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18972 chr11 83293486 . T C 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 18973 chr11 83315064 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 18974 chr11 83323301 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18975 chr11 83323310 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 18976 chr11 83331132 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 18977 chr11 83336677 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18978 chr11 83367461 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18979 chr11 83368453 . CA CAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18980 chr11 83382525 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18981 chr11 83398046 . a aTCT 11.8 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 18982 chr11 83412976 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18983 chr11 83424774 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18984 chr11 83438126 . A C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 18985 chr11 83446407 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18986 chr11 83447007 . G GTTGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18987 chr11 83471496 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18988 chr11 83489299 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 18989 chr11 83501960 . A G 6.98 . DP=6;AF1=0.5004;CI95=0.5,0.5;DP4=1,0,2,0;MQ=45;PV4=1,0.071,0.29,1 PL:DP:SP:GT:GQ 36,0,27:3:0:0/1:29 | |
| 18990 chr11 83502108 . G T 15.1 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=8,1,0,3;MQ=49;PV4=0.018,0.00062,1e-09,1 PL:DP:SP:GT:GQ 45,0,238:12:17:0/1:48 | |
| 18991 chr11 83510670 . C T 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,39:2:0:0/1:38 | |
| 18992 chr11 83522898 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18993 chr11 83532411 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 18994 chr11 83536043 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 18995 chr11 83556906 . aacagtaata aa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 18996 chr11 83579701 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18997 chr11 83589066 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 18998 chr11 83625989 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 18999 chr11 83637758 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19000 chr11 83648774 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19001 chr11 83674480 . A T 3.01 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,33:2:0:0/1:31 | |
| 19002 chr11 83701342 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19003 chr11 83706532 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19004 chr11 83707002 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19005 chr11 83748648 . G T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19006 chr11 83791217 . aa aAGCAGa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19007 chr11 83801171 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19008 chr11 83847616 . G GA 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 19009 chr11 83876249 . T TCCTCGGCCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19010 chr11 83882974 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 19011 chr11 83915761 . attt a 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 19012 chr11 83943255 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19013 chr11 83946483 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19014 chr11 83951160 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19015 chr11 83962251 . A G 13 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 44,6,0:2:0:1/1:49 | |
| 19016 chr11 83964710 . A G 7.8 . DP=2;AF1=0.5001;CI95=0.5,0.5;DP4=0,1,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,32:2:0:0/1:34 | |
| 19017 chr11 83974817 . T TGCACTGGGAGGACG 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 19018 chr11 83975245 . C G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 19019 chr11 84008592 . T A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 19020 chr11 84053178 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19021 chr11 84099273 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19022 chr11 84120378 . TG TGAGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19023 chr11 84132564 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19024 chr11 84135083 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 19025 chr11 84152279 . tc tCGCc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19026 chr11 84155437 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19027 chr11 84155498 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=46 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19028 chr11 84159086 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19029 chr11 84180906 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19030 chr11 84190967 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19031 chr11 84200124 . a aCGGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19032 chr11 84200189 . A C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 19033 chr11 84202013 . A C 5.46 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19034 chr11 84215756 . G A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 19035 chr11 84228686 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19036 chr11 84231606 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19037 chr11 84253036 . T A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 19038 chr11 84284438 . CA CACGGTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19039 chr11 84294275 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 19040 chr11 84299883 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19041 chr11 84316660 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19042 chr11 84330729 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19043 chr11 84348276 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19044 chr11 84358296 . AG AGAGTAGCTGCG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19045 chr11 84365828 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19046 chr11 84391909 . G C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 19047 chr11 84403036 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 19048 chr11 84410727 . T A 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,1;MQ=43;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,41:2:0:0/1:33 | |
| 19049 chr11 84411105 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19050 chr11 84420132 . T G 14.9 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47 PL:DP:SP:GT:GQ 46,6,0:2:0:1/1:49 | |
| 19051 chr11 84431822 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19052 chr11 84442442 . cgaggag cgag 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 19053 chr11 84464043 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=46 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19054 chr11 84469061 . G C 3.98 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=50 PL:DP:SP:GT:GQ 33,6,0:2:0:1/1:49 | |
| 19055 chr11 84471645 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 19056 chr11 84478426 . t tTCCTGCGGGC 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=49 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 19057 chr11 84482741 . T G 6.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 19058 chr11 84509595 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19059 chr11 84593632 . CT CTTTGCCATTTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19060 chr11 84595369 . Taaaacaaaacaaaacaaaacaaaac Taaaacaaaacaaaacaaaac 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19061 chr11 84630583 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19062 chr11 84639099 . ACT ACTTAATGCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19063 chr11 84652900 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 19064 chr11 84671163 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19065 chr11 84688301 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19066 chr11 84711766 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19067 chr11 84728902 . C T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 19068 chr11 84732263 . T TGACACAGAG 3.25 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,100:4:0:0/1:41 | |
| 19069 chr11 84734577 . TATAAATA TATA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19070 chr11 84772907 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19071 chr11 84797564 . C T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 19072 chr11 84814541 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 19073 chr11 84819614 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 19074 chr11 84820380 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19075 chr11 84838307 . tc tCACAGAAc 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 19076 chr11 84862828 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19077 chr11 84868963 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19078 chr11 84876984 . TGCAGC T 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 19079 chr11 84887850 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 19080 chr11 84891073 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19081 chr11 84905174 . a aCT 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 19082 chr11 84912620 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 19083 chr11 84917946 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 19084 chr11 84921597 . tataaccg t 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19085 chr11 84951619 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19086 chr11 84982705 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19087 chr11 84985650 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19088 chr11 84996006 . AC ACCCCATACC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19089 chr11 85001817 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 19090 chr11 85042609 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19091 chr11 85045251 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19092 chr11 85070886 . T TTAGAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19093 chr11 85087933 . GAT GATTGCAAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19094 chr11 85088488 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19095 chr11 85090580 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19096 chr11 85093916 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19097 chr11 85143882 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19098 chr11 85169497 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19099 chr11 85169524 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19100 chr11 85171164 . C G 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19101 chr11 85192493 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19102 chr11 85223094 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19103 chr11 85224632 . A T 6.2 . DP=3;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,2,0;MQ=46;PV4=0.33,0.062,0.33,1 PL:DP:SP:GT:GQ 35,0,41:3:0:0/1:37 | |
| 19104 chr11 85236761 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 19105 chr11 85251426 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19106 chr11 85252788 . G T 14.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 19107 chr11 85300556 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19108 chr11 85305206 . G C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 19109 chr11 85305742 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19110 chr11 85346678 . T G 5.29 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 35,6,0:2:0:1/1:49 | |
| 19111 chr11 85352321 . aaa aAACGGTTTaa 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 19112 chr11 85367289 . C T 79.3 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=45 PL:DP:SP:GT:GQ 112,15,0:5:0:1/1:75 | |
| 19113 chr11 85375241 . CCTTCTTCTTC CCTTCTTC 12.7 . INDEL;DP=5;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19114 chr11 85379388 . T TCAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19115 chr11 85415468 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19116 chr11 85436303 . T C 99 . DP=24;AF1=1;CI95=1,1;DP4=1,0,4,11;MQ=46;PV4=0.31,1,0.18,1 PL:DP:SP:GT:GQ 215,28,0:16:0:1/1:99 | |
| 19117 chr11 85436394 . T C 13.7 . DP=35;AF1=0.9998;CI95=0.5,1;DP4=1,0,4,0;MQ=49;PV4=1,1,0.29,1 PL:DP:SP:GT:GQ 43,2,0:5:0:1/1:37 | |
| 19118 chr11 85436500 . T C 99 . DP=54;AF1=1;CI95=1,1;DP4=0,0,9,9;MQ=49 PL:DP:SP:GT:GQ 199,54,0:18:0:1/1:99 | |
| 19119 chr11 85436699 . A G 67.1 . DP=40;AF1=0.5064;CI95=0.5,0.5;DP4=0,1,2,6;MQ=49;PV4=1,0.0001,0.23,1 PL:DP:SP:GT:GQ 97,0,16:9:0:0/1:19 | |
| 19120 chr11 85437529 . T A 4.13 . DP=25;AF1=0.4998;CI95=0.5,0.5;DP4=2,2,0,2;MQ=46;PV4=0.47,1,1,1 PL:DP:SP:GT:GQ 32,0,56:6:3:0/1:35 | |
| 19121 chr11 85439185 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19122 chr11 85442231 . tc tCTTCTCAGAc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19123 chr11 85447611 . T C 99 . DP=21;AF1=1;CI95=1,1;DP4=0,1,1,13;MQ=43;PV4=1,1,0.00052,1 PL:DP:SP:GT:GQ 231,19,0:15:0:1/1:76 | |
| 19124 chr11 85467411 . GTCCT GT 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19125 chr11 85506677 . AG AGGG 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 19126 chr11 85511124 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19127 chr11 85515236 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19128 chr11 85525884 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19129 chr11 85529583 . agg aGGgg 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19130 chr11 85530571 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19131 chr11 85536650 . GCA GCAGAACA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19132 chr11 85541034 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19133 chr11 85546136 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19134 chr11 85576113 . CTTT CTTTT 65.7 . INDEL;DP=8;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=50 PL:DP:SP:GT:GQ 106,15,0:5:0:1/1:75 | |
| 19135 chr11 85584382 . ACACTCA AGCGCGCCACTCA,ACA 9.94 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,2;MQ=50 PL:DP:SP:GT:GQ 66,22,47,19,0,44:2:0:1/1:41 | |
| 19136 chr11 85593506 . A G 90 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=5,0,8,0;MQ=48;PV4=1,1.2e-05,0.0093,0.21 PL:DP:SP:GT:GQ 120,0,147:13:0:0/1:99 | |
| 19137 chr11 85594739 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19138 chr11 85605612 . t tCGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19139 chr11 85606263 . A AT 25.2 . INDEL;DP=4;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=50 PL:DP:SP:GT:GQ 64,6,0:2:0:1/1:49 | |
| 19140 chr11 85612521 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19141 chr11 85621002 . A AAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19142 chr11 85627039 . A G 10.4 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=5,0,3,0;MQ=49;PV4=1,0.037,0.11,1 PL:DP:SP:GT:GQ 40,0,139:8:0:0/1:43 | |
| 19143 chr11 85627108 . T C 99 . DP=36;AF1=0.5;CI95=0.5,0.5;DP4=12,8,7,5;MQ=48;PV4=1,0.0039,1.2e-10,1 PL:DP:SP:GT:GQ 243,0,255:32:0:0/1:99 | |
| 19144 chr11 85631917 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19145 chr11 85632908 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19146 chr11 85645734 . A AGCAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19147 chr11 85665497 . T C 6.98 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,44:2:0:0/1:38 | |
| 19148 chr11 85667601 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19149 chr11 85678299 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19150 chr11 85680471 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19151 chr11 85681827 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19152 chr11 85692342 . A C 3.98 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=50 PL:DP:SP:GT:GQ 33,6,0:2:0:1/1:49 | |
| 19153 chr11 85694697 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19154 chr11 85700031 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19155 chr11 85700326 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19156 chr11 85710657 . A C 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 19157 chr11 85716870 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19158 chr11 85725937 . C T 19 . DP=11;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=48 PL:DP:SP:GT:GQ 51,9,0:3:0:1/1:63 | |
| 19159 chr11 85731692 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19160 chr11 85769354 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19161 chr11 85790990 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19162 chr11 85812777 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19163 chr11 85820755 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19164 chr11 85835810 . G A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 19165 chr11 85836727 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19166 chr11 85884951 . A T 3.07 . DP=2;AF1=0.5126;CI95=0.5,0.5;DP4=0,1,0,1;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,13:2:0:0/1:16 | |
| 19167 chr11 85904073 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19168 chr11 85913587 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19169 chr11 85921521 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19170 chr11 85922211 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19171 chr11 85961290 . A C 5.46 . DP=13;AF1=0.4999;CI95=0.5,0.5;DP4=4,0,3,0;MQ=49;PV4=1,0.14,0.17,1 PL:DP:SP:GT:GQ 34,0,78:7:0:0/1:37 | |
| 19172 chr11 85971473 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19173 chr11 85975349 . CTGTG CTG 88.5 . INDEL;DP=16;AF1=0.5;CI95=0.5,0.5;DP4=0,9,0,5;MQ=50;PV4=1,0.06,1,0.42 PL:DP:SP:GT:GQ 126,0,201:14:0:0/1:99 | |
| 19174 chr11 85977117 . G A 6.98 . DP=9;AF1=0.4999;CI95=0.5,0.5;DP4=4,1,0,2;MQ=48;PV4=0.14,0.099,2.4e-06,0.18 PL:DP:SP:GT:GQ 36,0,164:7:8:0/1:39 | |
| 19175 chr11 85977210 . T C 15.1 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=6,3,0,4;MQ=49;PV4=0.07,0.093,0.14,1 PL:DP:SP:GT:GQ 45,0,198:13:12:0/1:48 | |
| 19176 chr11 85989383 . G T 13.2 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=7,1,5,0;MQ=48;PV4=1,0.038,1,1 PL:DP:SP:GT:GQ 43,0,154:13:0:0/1:46 | |
| 19177 chr11 85989511 . A C 6.98 . DP=7;AF1=0.4999;CI95=0.5,0.5;DP4=2,1,0,2;MQ=47;PV4=0.4,0.47,0.0024,1 PL:DP:SP:GT:GQ 36,0,67:5:4:0/1:39 | |
| 19178 chr11 85999597 . AA AACTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19179 chr11 86006421 . T C 8.44 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 39,6,0:2:0:1/1:49 | |
| 19180 chr11 86006430 . A T 3.01 . DP=3;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=48;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 19181 chr11 86019360 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19182 chr11 86047937 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19183 chr11 86050608 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19184 chr11 86075637 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19185 chr11 86082448 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19186 chr11 86086809 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19187 chr11 86097064 . A T 17.1 . DP=10;AF1=0.5;CI95=0.5,0.5;DP4=4,0,4,0;MQ=49;PV4=1,0.019,1,1 PL:DP:SP:GT:GQ 47,0,69:8:0:0/1:50 | |
| 19188 chr11 86098680 . T C 33.5 . DP=32;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=48 PL:DP:SP:GT:GQ 66,12,0:4:0:1/1:72 | |
| 19189 chr11 86098732 . G A 6.2 . DP=17;AF1=0.4999;CI95=0.5,0.5;DP4=0,8,0,9;MQ=50;PV4=1,1.9e-13,1,1 PL:DP:SP:GT:GQ 35,0,193:17:0:0/1:38 | |
| 19190 chr11 86111060 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19191 chr11 86131172 . att a 4.42 . INDEL;DP=6;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 40,0,41:2:0:0/1:40 | |
| 19192 chr11 86131174 . T C 10.2 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47 PL:DP:SP:GT:GQ 41,6,0:2:0:1/1:49 | |
| 19193 chr11 86149500 . tc tCGc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19194 chr11 86192677 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19195 chr11 86195042 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19196 chr11 86204493 . C G 4.61 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=49 PL:DP:SP:GT:GQ 34,6,0:2:0:1/1:49 | |
| 19197 chr11 86206989 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19198 chr11 86208334 . T C 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19199 chr11 86221300 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19200 chr11 86223125 . ct cTCACTGt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19201 chr11 86224027 . T G 3.55 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19202 chr11 86265316 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19203 chr11 86284100 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19204 chr11 86296336 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 19205 chr11 86318547 . T A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19206 chr11 86318758 . t tGGGAGGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19207 chr11 86323154 . t tATTA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 19208 chr11 86333256 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19209 chr11 86336379 . AT ATTAAAAAAGGGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19210 chr11 86340596 . A C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 19211 chr11 86349171 . ACC ACCC 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19212 chr11 86381000 . T G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19213 chr11 86385509 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 19214 chr11 86393982 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19215 chr11 86394954 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19216 chr11 86450246 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19217 chr11 86459102 . gcacag gCACAGCcacag 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19218 chr11 86477863 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19219 chr11 86482525 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19220 chr11 86490719 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19221 chr11 86520583 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19222 chr11 86526234 . ttctc tTCtctc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19223 chr11 86566562 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19224 chr11 86582707 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19225 chr11 86593929 . T G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 19226 chr11 86612995 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19227 chr11 86619028 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19228 chr11 86643005 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19229 chr11 86668681 . T A 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,41:2:0:0/1:34 | |
| 19230 chr11 86693545 . C A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 19231 chr11 86695916 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 19232 chr11 86713995 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19233 chr11 86716969 . CA CAAGGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19234 chr11 86729030 . GC GCTAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19235 chr11 86735894 . T C 3.54 . DP=4;AF1=0.4998;CI95=0.5,0.5;DP4=0,2,2,0;MQ=48;PV4=0.33,0.19,0.21,0.19 PL:DP:SP:GT:GQ 31,0,70:4:5:0/1:34 | |
| 19236 chr11 86736683 . T A 24 . DP=20;AF1=0.5;CI95=0.5,0.5;DP4=5,3,10,0;MQ=49;PV4=0.069,2.7e-09,1,1 PL:DP:SP:GT:GQ 54,0,249:18:12:0/1:57 | |
| 19237 chr11 86745831 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19238 chr11 86745862 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19239 chr11 86749821 . AAG AAGCGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19240 chr11 86782663 . A C 45 . DP=23;AF1=0.5;CI95=0.5,0.5;DP4=0,5,0,8;MQ=49;PV4=1,0.00039,0.014,1 PL:DP:SP:GT:GQ 75,0,129:13:0:0/1:78 | |
| 19241 chr11 86788064 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 19242 chr11 86795184 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19243 chr11 86795189 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19244 chr11 86805772 . A G 12 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 43,6,0:2:0:1/1:49 | |
| 19245 chr11 86806071 . C G 99 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=43 PL:DP:SP:GT:GQ 141,15,0:5:0:1/1:75 | |
| 19246 chr11 86807104 . C A 41.2 . DP=11;AF1=0.5263;CI95=0.5,1;DP4=0,1,1,4;MQ=48;PV4=1,0.24,0.31,1 PL:DP:SP:GT:GQ 71,0,10:6:0:0/1:13 | |
| 19247 chr11 86807152 . AATATA AATATATA 10.8 . INDEL;DP=8;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 19248 chr11 86807156 . TA TATGA 42.2 . INDEL;DP=5;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=50 PL:DP:SP:GT:GQ 81,6,0:2:0:1/1:49 | |
| 19249 chr11 86834601 . G T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19250 chr11 86842604 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 19251 chr11 86854384 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19252 chr11 86872700 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19253 chr11 86883029 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19254 chr11 86896404 . gg gGCGAACACg 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19255 chr11 86934596 . G C 4.14 . DP=2;AF1=0.5011;CI95=0.5,0.5;DP4=1,0,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,23:2:0:0/1:25 | |
| 19256 chr11 86950667 . T TTTGTACATG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19257 chr11 86974329 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19258 chr11 86983361 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19259 chr11 86987451 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19260 chr11 87003373 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19261 chr11 87006171 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19262 chr11 87007256 . C A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 19263 chr11 87020504 . A C 6.98 . DP=19;AF1=0.4999;CI95=0.5,0.5;DP4=3,0,5,0;MQ=48;PV4=1,0.0086,0.14,0.25 PL:DP:SP:GT:GQ 36,0,51:8:0:0/1:39 | |
| 19264 chr11 87031246 . G A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 19265 chr11 87040644 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19266 chr11 87065832 . C G 9.09 . DP=3;AF1=0.5718;CI95=0.5,1;DP4=0,1,1,1;MQ=46;PV4=1,1,0.14,1 PL:DP:SP:GT:GQ 38,0,6:3:0:0/1:8 | |
| 19267 chr11 87069445 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 19268 chr11 87086070 . T C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 19269 chr11 87107903 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19270 chr11 87115480 . G C 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19271 chr11 87185549 . A ACGGTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19272 chr11 87197665 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19273 chr11 87222745 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 19274 chr11 87244727 . caga cAGaga 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19275 chr11 87260175 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19276 chr11 87281525 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19277 chr11 87396669 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19278 chr11 87396677 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19279 chr11 87407386 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19280 chr11 87414965 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19281 chr11 87435474 . CATG CATGATG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19282 chr11 87454421 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19283 chr11 87479060 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19284 chr11 87486292 . A ACTCTGATACT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19285 chr11 87542099 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19286 chr11 87545571 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19287 chr11 87556713 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19288 chr11 87569439 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19289 chr11 87574462 . CTGTTTG CTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19290 chr11 87584296 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19291 chr11 87617241 . A C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 19292 chr11 87634689 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19293 chr11 87663353 . T TATA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19294 chr11 87771909 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19295 chr11 87788006 . CAGGAG CAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19296 chr11 87817590 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19297 chr11 87820587 . t tCTAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19298 chr11 87823194 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19299 chr11 87835164 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19300 chr11 87852329 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19301 chr11 87868910 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19302 chr11 87868915 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19303 chr11 87882957 . A C 7.8 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=2,1,0,3;MQ=49;PV4=0.4,0.082,0.058,1 PL:DP:SP:GT:GQ 37,0,85:6:4:0/1:40 | |
| 19304 chr11 87882958 . ACC ACGACCC 5.08 . INDEL;DP=16;AF1=0.5;CI95=0.5,0.5;DP4=1,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,65:3:0:0/1:44 | |
| 19305 chr11 87892500 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19306 chr11 87902957 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19307 chr11 87908448 . A G 25.1 . DP=21;AF1=0.5102;CI95=0.5,0.5;DP4=0,1,6,0;MQ=47;PV4=0.14,0.048,0.28,1 PL:DP:SP:GT:GQ 55,0,14:7:0:0/1:17 | |
| 19308 chr11 87918306 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19309 chr11 87963872 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19310 chr11 87964287 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 19311 chr11 88009680 . T G 3.55 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19312 chr11 88011000 . C A 6.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 19313 chr11 88027209 . T C 99 . DP=48;AF1=0.5;CI95=0.5,0.5;DP4=13,15,5,13;MQ=49;PV4=0.23,3.6e-11,0.00072,1 PL:DP:SP:GT:GQ 150,0,255:46:6:0/1:99 | |
| 19314 chr11 88031812 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19315 chr11 88041798 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19316 chr11 88045583 . A G 99 . DP=27;AF1=1;CI95=1,1;DP4=0,0,7,13;MQ=48 PL:DP:SP:GT:GQ 206,60,0:20:0:1/1:99 | |
| 19317 chr11 88058487 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19318 chr11 88087805 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 19319 chr11 88114949 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 19320 chr11 88123086 . G T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19321 chr11 88126360 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19322 chr11 88163505 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19323 chr11 88179676 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 19324 chr11 88238230 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19325 chr11 88268348 . TCT TCTGCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19326 chr11 88291128 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 19327 chr11 88317624 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19328 chr11 88323743 . T C 99 . DP=23;AF1=1;CI95=1,1;DP4=0,0,19,1;MQ=49 PL:DP:SP:GT:GQ 147,60,0:20:0:1/1:99 | |
| 19329 chr11 88323928 . T A 12.6 . DP=16;AF1=0.543;CI95=0.5,1;DP4=0,1,0,3;MQ=47;PV4=1,1,0.22,1 PL:DP:SP:GT:GQ 42,0,8:4:0:0/1:11 | |
| 19330 chr11 88330322 . A C 8.64 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=4,0,4,0;MQ=49;PV4=1,1,0.015,1 PL:DP:SP:GT:GQ 38,0,43:8:0:0/1:40 | |
| 19331 chr11 88354158 . T TCTG 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 19332 chr11 88364189 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19333 chr11 88386211 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19334 chr11 88394472 . T TTAACC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19335 chr11 88426756 . ca cACAa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19336 chr11 88431523 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19337 chr11 88445023 . a aTGC 7.35 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 19338 chr11 88476357 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19339 chr11 88497503 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 19340 chr11 88511502 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19341 chr11 88631883 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 19342 chr11 88636436 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19343 chr11 88648617 . T G 20.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=45 PL:DP:SP:GT:GQ 52,6,0:2:0:1/1:49 | |
| 19344 chr11 88652098 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19345 chr11 88685213 . T TGG 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19346 chr11 88708958 . TTC TTCATC 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 19347 chr11 88735033 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19348 chr11 88741831 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19349 chr11 88778073 . T TTCAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19350 chr11 88780763 . CA CATGACTGA 3.25 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,1;MQ=50;PV4=1,1,1,0.3 PL:DP:SP:GT:GQ 38,0,114:4:0:0/1:41 | |
| 19351 chr11 88785210 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19352 chr11 88802169 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19353 chr11 88843169 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19354 chr11 88849988 . ATGAT A 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 19355 chr11 88884941 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19356 chr11 88911269 . T A 3.54 . DP=19;AF1=0.4998;CI95=0.5,0.5;DP4=5,3,0,3;MQ=49;PV4=0.18,0.15,0.0028,1 PL:DP:SP:GT:GQ 31,0,177:11:7:0/1:34 | |
| 19357 chr11 88916707 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19358 chr11 88921299 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19359 chr11 88922487 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19360 chr11 88970015 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19361 chr11 89028100 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19362 chr11 89030752 . T G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 19363 chr11 89046247 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19364 chr11 89059999 . CT CTAT 8.19 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 19365 chr11 89073269 . G A 7.8 . DP=8;AF1=0.5;CI95=0.5,0.5;DP4=1,1,2,0;MQ=48;PV4=1,0.33,0.16,1 PL:DP:SP:GT:GQ 37,0,44:4:0:0/1:39 | |
| 19366 chr11 89077517 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19367 chr11 89098590 . G GATACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19368 chr11 89135531 . C A 7.59 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=46 PL:DP:SP:GT:GQ 38,6,0:2:0:1/1:49 | |
| 19369 chr11 89140536 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19370 chr11 89167605 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19371 chr11 89184896 . C T 72 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=11,0,6,0;MQ=48;PV4=1,0.0015,6.2e-10,1 PL:DP:SP:GT:GQ 102,0,216:17:0:0/1:99 | |
| 19372 chr11 89223616 . C G 21.3 . DP=12;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=50 PL:DP:SP:GT:GQ 54,15,0:5:0:1/1:75 | |
| 19373 chr11 89264258 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19374 chr11 89271786 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19375 chr11 89272435 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19376 chr11 89287184 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19377 chr11 89289487 . tc tCAGAGTAGc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19378 chr11 89307170 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19379 chr11 89312335 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19380 chr11 89343657 . G GA 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 19381 chr11 89347334 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19382 chr11 89360208 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19383 chr11 89361861 . T A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19384 chr11 89391802 . G C 8.14 . DP=6;AF1=0.5554;CI95=0.5,1;DP4=0,1,2,0;MQ=44;PV4=0.33,1,0,1 PL:DP:SP:GT:GQ 37,0,7:3:0:0/1:10 | |
| 19385 chr11 89405661 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19386 chr11 89409478 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19387 chr11 89416162 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 19388 chr11 89426686 . CCCAAAC CC 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 19389 chr11 89427023 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19390 chr11 89445618 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19391 chr11 89459472 . TAAGAA TAA 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 19392 chr11 89465807 . T TGG 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 19393 chr11 89466271 . AGAAG AGAAGGAAG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19394 chr11 89485686 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19395 chr11 89485850 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19396 chr11 89531708 . C A 3.54 . DP=3;AF1=0.4998;CI95=0.5,0.5;DP4=0,2,0,1;MQ=48;PV4=1,0.053,0,1 PL:DP:SP:GT:GQ 31,0,83:3:0:0/1:34 | |
| 19397 chr11 89532966 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19398 chr11 89548293 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19399 chr11 89552408 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19400 chr11 89566389 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19401 chr11 89578003 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19402 chr11 89617355 . TC TCACTGC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 19403 chr11 89620177 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19404 chr11 89622420 . AGACTG AG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19405 chr11 89630633 . A C 9.53 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 19406 chr11 89631757 . C G 3.55 . DP=2;AF1=0.5011;CI95=0.5,0.5;DP4=0,1,0,1;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,23:2:0:0/1:25 | |
| 19407 chr11 89656481 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19408 chr11 89665607 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19409 chr11 89677306 . T G 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19410 chr11 89719887 . A T 7.8 . DP=3;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 19411 chr11 89729018 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19412 chr11 89740353 . T TTTGTTGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19413 chr11 89768429 . TG TGCG 6.56 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19414 chr11 89820810 . T A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 19415 chr11 89860007 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19416 chr11 89863252 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19417 chr11 89867872 . C T 49 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=4,0,7,0;MQ=48;PV4=1,2.7e-05,8.9e-07,1 PL:DP:SP:GT:GQ 79,0,120:11:0:0/1:82 | |
| 19418 chr11 89868032 . C T 3.01 . DP=26;AF1=0.4997;CI95=0.5,0.5;DP4=1,9,0,4;MQ=49;PV4=1,0.15,0.45,1 PL:DP:SP:GT:GQ 30,0,162:14:0:0/1:33 | |
| 19419 chr11 89896655 . A G 4.77 . DP=12;AF1=0.4999;CI95=0.5,0.5;DP4=2,1,0,3;MQ=49;PV4=0.4,0.0045,0.079,0.31 PL:DP:SP:GT:GQ 33,0,98:6:4:0/1:36 | |
| 19420 chr11 89896819 . T TCCTGAAGA 5.08 . INDEL;DP=8;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,0.43,1,1 PL:DP:SP:GT:GQ 41,0,83:3:0:0/1:44 | |
| 19421 chr11 89902154 . A G 3.01 . DP=8;AF1=0.4997;CI95=0.5,0.5;DP4=1,2,1,1;MQ=49;PV4=1,0.0051,0.14,1 PL:DP:SP:GT:GQ 30,0,126:5:0:0/1:33 | |
| 19422 chr11 89937863 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 19423 chr11 89956194 . G C,T 6.79 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=47 PL:DP:SP:GT:GQ 57,26,35,20,0,35:3:0:1/1:49 | |
| 19424 chr11 89964228 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 19425 chr11 89985146 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19426 chr11 89998134 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19427 chr11 90016215 . TT TTCTTGACCCCT 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19428 chr11 90016648 . A C 4.13 . DP=13;AF1=0.4998;CI95=0.5,0.5;DP4=1,3,3,0;MQ=49;PV4=0.14,0.024,0.4,1 PL:DP:SP:GT:GQ 32,0,113:7:8:0/1:35 | |
| 19429 chr11 90035131 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 19430 chr11 90046542 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 19431 chr11 90051305 . T TTAACCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19432 chr11 90058149 . t tCAAAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19433 chr11 90062152 . T TGCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19434 chr11 90069600 . TT TTGAGGAGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19435 chr11 90128279 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19436 chr11 90141918 . gctataata g 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 19437 chr11 90146090 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19438 chr11 90165561 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19439 chr11 90195810 . tc tCCACCGCAc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19440 chr11 90219657 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19441 chr11 90230582 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19442 chr11 90234307 . A T 3.54 . DP=3;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,2,0;MQ=45;PV4=1,0.084,0.17,0.19 PL:DP:SP:GT:GQ 31,0,41:3:0:0/1:34 | |
| 19443 chr11 90243773 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19444 chr11 90256183 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19445 chr11 90275623 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19446 chr11 90286925 . G T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19447 chr11 90290210 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19448 chr11 90331365 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19449 chr11 90375731 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19450 chr11 90395937 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19451 chr11 90436421 . agg aGGgg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19452 chr11 90460203 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19453 chr11 90492463 . tatctaa t 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19454 chr11 90557631 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19455 chr11 90562037 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19456 chr11 90572410 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19457 chr11 90578176 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19458 chr11 90598288 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19459 chr11 90621852 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19460 chr11 90633402 . gaatggtaa gAATGGTAaatggtaa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19461 chr11 90658782 . TT TTAGCT 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 19462 chr11 90685990 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 19463 chr11 90687450 . a aCATAAT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 19464 chr11 90691648 . T G 4.14 . DP=2;AF1=0.5018;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,21:2:0:0/1:24 | |
| 19465 chr11 90693115 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19466 chr11 90699098 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19467 chr11 90722820 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19468 chr11 90774681 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19469 chr11 90778969 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19470 chr11 90814226 . A C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19471 chr11 90821002 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19472 chr11 90848705 . A G 14.9 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47 PL:DP:SP:GT:GQ 46,6,0:2:0:1/1:49 | |
| 19473 chr11 90849279 . C G 99 . DP=9;AF1=1;CI95=0.5,1;DP4=0,0,4,2;MQ=47 PL:DP:SP:GT:GQ 133,18,0:6:0:1/1:90 | |
| 19474 chr11 90849544 . TAA TAAGAA 3.25 . INDEL;DP=6;AF1=0.5;CI95=0.5,0.5;DP4=1,2,1,0;MQ=50;PV4=1,1,1,0.22 PL:DP:SP:GT:GQ 38,0,99:4:0:0/1:41 | |
| 19475 chr11 90859364 . C T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 19476 chr11 90881741 . G C 8.65 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19477 chr11 90883311 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19478 chr11 90896457 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19479 chr11 90906718 . t tCCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19480 chr11 90909780 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19481 chr11 90916018 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19482 chr11 90924161 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 19483 chr11 90943074 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19484 chr11 90943126 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19485 chr11 91012251 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19486 chr11 91027242 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19487 chr11 91047765 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19488 chr11 91066979 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 19489 chr11 91090919 . C CGTTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19490 chr11 91103110 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19491 chr11 91117887 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19492 chr11 91129091 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 19493 chr11 91135557 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19494 chr11 91139444 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19495 chr11 91150607 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19496 chr11 91228457 . a aCTGT 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 19497 chr11 91228884 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19498 chr11 91230504 . t tAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19499 chr11 91234519 . A C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19500 chr11 91251175 . T TTGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19501 chr11 91279763 . t tCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19502 chr11 91307928 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19503 chr11 91324438 . gt gTCTt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19504 chr11 91324854 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19505 chr11 91328204 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19506 chr11 91336987 . C T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 19507 chr11 91353955 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19508 chr11 91365212 . A AAAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19509 chr11 91390143 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19510 chr11 91391463 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19511 chr11 91421426 . G GGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19512 chr11 91460523 . C A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19513 chr11 91475024 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19514 chr11 91476861 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19515 chr11 91484614 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19516 chr11 91487258 . tATTATT tATT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19517 chr11 91489713 . C T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 19518 chr11 91490803 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19519 chr11 91500498 . A ACGCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19520 chr11 91501210 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19521 chr11 91505556 . G A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 19522 chr11 91506612 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19523 chr11 91511634 . g gT 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 19524 chr11 91521058 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 19525 chr11 91545712 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19526 chr11 91545974 . C G 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 19527 chr11 91546114 . G GCGGCCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19528 chr11 91555852 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19529 chr11 91597710 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19530 chr11 91606196 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19531 chr11 91640489 . CT CTTGTAGCATT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=48;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,39:2:0:0/1:41 | |
| 19532 chr11 91663967 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 19533 chr11 91666515 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 19534 chr11 91674874 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19535 chr11 91706185 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 19536 chr11 91717910 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 19537 chr11 91740200 . G A 47.1 . DP=4;AF1=0.5102;CI95=0.5,0.5;DP4=0,1,0,3;MQ=45;PV4=1,1,0.021,1 PL:DP:SP:GT:GQ 77,0,14:4:0:0/1:17 | |
| 19538 chr11 91753236 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19539 chr11 91772411 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19540 chr11 91773871 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19541 chr11 91815622 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19542 chr11 91835483 . T C 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19543 chr11 91871003 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19544 chr11 91875370 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19545 chr11 91881303 . AA AAGTAAAGA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 19546 chr11 91919707 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19547 chr11 91931779 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19548 chr11 91937710 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19549 chr11 91951430 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19550 chr11 91951737 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19551 chr11 91958679 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19552 chr11 91967557 . T G 3.55 . DP=2;AF1=0.5004;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,26:2:0:0/1:28 | |
| 19553 chr11 91979868 . G A 31.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=43 PL:DP:SP:GT:GQ 63,6,0:2:0:1/1:49 | |
| 19554 chr11 91984288 . G T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19555 chr11 91990635 . C A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19556 chr11 92021495 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19557 chr11 92024353 . t tCCCAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19558 chr11 92032765 . G GCT 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 19559 chr11 92064106 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19560 chr11 92075340 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19561 chr11 92100356 . A T 8.64 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=3,4,1,1;MQ=49;PV4=1,0.0071,0.00032,1 PL:DP:SP:GT:GQ 38,0,247:9:0:0/1:41 | |
| 19562 chr11 92106705 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19563 chr11 92107178 . a aACT 4.75 . INDEL;DP=6;AF1=0.5718;CI95=0.5,1;DP4=0,1,1,0;MQ=36;PV4=1,1,1,1 PL:DP:SP:GT:GQ 40,0,6:2:0:0/1:8 | |
| 19564 chr11 92141731 . g gCCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19565 chr11 92150162 . C G 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19566 chr11 92161092 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19567 chr11 92167227 . G C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 19568 chr11 92167317 . A C 5.46 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,44:2:0:0/1:37 | |
| 19569 chr11 92201910 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19570 chr11 92210125 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19571 chr11 92213004 . gg gGGGCAGCCCCGGATCAg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19572 chr11 92217073 . gttg gTTGTTttg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19573 chr11 92244905 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19574 chr11 92279516 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 19575 chr11 92307617 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19576 chr11 92313589 . T G 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19577 chr11 92338373 . AAGGA AA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19578 chr11 92341142 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19579 chr11 92341613 . T G 10.4 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 19580 chr11 92342313 . C CTGTT 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 19581 chr11 92354147 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19582 chr11 92364910 . A C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19583 chr11 92400502 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 19584 chr11 92403166 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=46 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19585 chr11 92420691 . A ACCTAGTGTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19586 chr11 92426551 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 19587 chr11 92438661 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19588 chr11 92489574 . T G 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19589 chr11 92494946 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19590 chr11 92495320 . G C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 19591 chr11 92507832 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19592 chr11 92513400 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19593 chr11 92570175 . G C 8.65 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19594 chr11 92603458 . T C 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19595 chr11 92610615 . ccag c 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19596 chr11 92628323 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19597 chr11 92635873 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19598 chr11 92642841 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19599 chr11 92665238 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19600 chr11 92681013 . C T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 19601 chr11 92681525 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19602 chr11 92692086 . T A 5.46 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,44:2:0:0/1:37 | |
| 19603 chr11 92692196 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19604 chr11 92706175 . G A 46.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=43 PL:DP:SP:GT:GQ 78,6,0:2:0:1/1:49 | |
| 19605 chr11 92709679 . G T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 19606 chr11 92711477 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19607 chr11 92712868 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19608 chr11 92715341 . GA GACTA 8.18 . INDEL;DP=21;AF1=0.5;CI95=0.5,0.5;DP4=0,4,3,0;MQ=50;PV4=0.029,1,0.14,0.085 PL:DP:SP:GT:GQ 45,0,135:7:15:0/1:48 | |
| 19609 chr11 92715357 . T A 3.54 . DP=9;AF1=0.4998;CI95=0.5,0.5;DP4=1,2,1,1;MQ=47;PV4=1,0.18,0.43,0.21 PL:DP:SP:GT:GQ 31,0,97:5:0:0/1:34 | |
| 19610 chr11 92716664 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19611 chr11 92716680 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19612 chr11 92717633 . CTC CTCTTTGAGCTTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19613 chr11 92730859 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19614 chr11 92730864 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19615 chr11 92793103 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19616 chr11 92815571 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19617 chr11 92828060 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19618 chr11 92846653 . G A 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19619 chr11 92858937 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 19620 chr11 92863337 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19621 chr11 92882034 . T G,C 7.59 . DP=11;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=48 PL:DP:SP:GT:GQ 45,13,37,7,0,37:3:0:1/1:49 | |
| 19622 chr11 92887205 . A G 20.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 52,6,0:2:0:1/1:49 | |
| 19623 chr11 92895879 . C A 40 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=5,3,8,0;MQ=49;PV4=0.2,6.8e-06,0.42,1 PL:DP:SP:GT:GQ 70,0,248:16:7:0/1:73 | |
| 19624 chr11 92903037 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 19625 chr11 92918939 . C A 16.1 . DP=31;AF1=0.5;CI95=0.5,0.5;DP4=6,6,0,5;MQ=49;PV4=0.1,0.017,0.00098,1 PL:DP:SP:GT:GQ 46,0,255:17:10:0/1:49 | |
| 19626 chr11 92919058 . A C 24 . DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,2;MQ=48;PV4=1,0.016,0.3,0.32 PL:DP:SP:GT:GQ 54,0,38:4:0:0/1:41 | |
| 19627 chr11 92935065 . t tG 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 19628 chr11 92964165 . TT TTTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19629 chr11 92977546 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 19630 chr11 92985576 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19631 chr11 92990798 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19632 chr11 92994540 . aca aCATGTAATTca 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=48 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19633 chr11 93000276 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19634 chr11 93022630 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19635 chr11 93063334 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19636 chr11 93089386 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 19637 chr11 93125313 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19638 chr11 93190202 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 19639 chr11 93209609 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19640 chr11 93211933 . TGA TGAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19641 chr11 93212254 . C T 99 . DP=11;AF1=1;CI95=1,1;DP4=0,0,9,0;MQ=44 PL:DP:SP:GT:GQ 139,27,0:9:0:1/1:99 | |
| 19642 chr11 93216995 . G T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19643 chr11 93223860 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19644 chr11 93225406 . T G 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 19645 chr11 93225439 . g gGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19646 chr11 93228726 . CC CCAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19647 chr11 93232715 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19648 chr11 93234693 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19649 chr11 93270540 . A ATATAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19650 chr11 93283194 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19651 chr11 93289743 . G T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 19652 chr11 93298049 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19653 chr11 93298530 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 19654 chr11 93343259 . A C 55 . DP=21;AF1=0.5;CI95=0.5,0.5;DP4=3,4,1,5;MQ=49;PV4=0.56,0.0013,0.0056,1 PL:DP:SP:GT:GQ 85,0,218:13:3:0/1:88 | |
| 19655 chr11 93348062 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19656 chr11 93367284 . G GGTCTAATAATTCA 6.36 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 44,6,0:2:0:1/1:49 | |
| 19657 chr11 93371079 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19658 chr11 93378157 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19659 chr11 93380061 . g gTGTGGGTTTTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19660 chr11 93394665 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19661 chr11 93413754 . c cGGTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19662 chr11 93418836 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19663 chr11 93432049 . TTT TTTTCTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19664 chr11 93438525 . a aT 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 19665 chr11 93451643 . C A 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 19666 chr11 93460950 . T G 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19667 chr11 93462207 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19668 chr11 93465470 . G A 3.98 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 33,6,0:2:0:1/1:49 | |
| 19669 chr11 93465946 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19670 chr11 93466844 . T A 3.01 . DP=8;AF1=0.4997;CI95=0.5,0.5;DP4=0,4,0,2;MQ=46;PV4=1,0.49,1,0.27 PL:DP:SP:GT:GQ 30,0,71:6:0:0/1:33 | |
| 19671 chr11 93468346 . TT TTCAT 3.25 . INDEL;DP=9;AF1=0.5;CI95=0.5,0.5;DP4=3,0,0,1;MQ=38;PV4=0.25,1,1,0.18 PL:DP:SP:GT:GQ 38,0,66:4:0:0/1:41 | |
| 19672 chr11 93471121 . G GCAAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19673 chr11 93472252 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19674 chr11 93480582 . T G 4.77 . DP=12;AF1=0.4999;CI95=0.5,0.5;DP4=2,4,0,3;MQ=49;PV4=0.5,0.15,0.056,0.31 PL:DP:SP:GT:GQ 33,0,139:9:3:0/1:36 | |
| 19675 chr11 93516272 . CA CACTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19676 chr11 93517643 . G T 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19677 chr11 93518953 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19678 chr11 93527282 . GAAAAAA GAAAAA 14.9 . INDEL;DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=50 PL:DP:SP:GT:GQ 55,15,0:5:0:1/1:75 | |
| 19679 chr11 93530682 . A T 14.3 . DP=13;AF1=0.5163;CI95=0.5,1;DP4=1,0,3,0;MQ=49;PV4=1,0.36,0.33,1 PL:DP:SP:GT:GQ 44,0,12:4:0:0/1:15 | |
| 19680 chr11 93530871 . T C 5.47 . DP=7;AF1=0.5015;CI95=0.5,0.5;DP4=1,1,0,2;MQ=49;PV4=1,1,0,0.1 PL:DP:SP:GT:GQ 34,0,22:4:0:0/1:25 | |
| 19681 chr11 93539901 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19682 chr11 93553311 . A ATTTCT 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 19683 chr11 93554820 . AC ACGTGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19684 chr11 93558804 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19685 chr11 93560970 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19686 chr11 93571155 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 19687 chr11 93582153 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19688 chr11 93589836 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19689 chr11 93590410 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19690 chr11 93602812 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19691 chr11 93618046 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19692 chr11 93623054 . T A 4.78 . DP=5;AF1=0.5024;CI95=0.5,0.5;DP4=0,1,1,1;MQ=49;PV4=1,0.29,0.33,1 PL:DP:SP:GT:GQ 33,0,20:3:0:0/1:23 | |
| 19693 chr11 93640173 . GT GTGATCTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19694 chr11 93646527 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 19695 chr11 93649145 . tttttc t 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19696 chr11 93656211 . g gTCGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19697 chr11 93686624 . C CCCACCTGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19698 chr11 93694180 . T A 14.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 19699 chr11 93700747 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19700 chr11 93731995 . CAAAAA CAAAA 3.43 . INDEL;DP=4;AF1=0.543;CI95=0.5,1;DP4=1,0,3,0;MQ=50;PV4=1,0.013,1,0.12 PL:DP:SP:GT:GQ 38,0,8:4:0:0/1:11 | |
| 19701 chr11 93734257 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19702 chr11 93740807 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19703 chr11 93743476 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19704 chr11 93744994 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 19705 chr11 93754562 . ATC ATCCTCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19706 chr11 93776078 . C CCGGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19707 chr11 93785609 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 19708 chr11 93788270 . A G 25.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=46 PL:DP:SP:GT:GQ 57,6,0:2:0:1/1:49 | |
| 19709 chr11 93850525 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 19710 chr11 93851305 . aaacc a 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 19711 chr11 93863082 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19712 chr11 93865657 . G GACAGTGACT 11.8 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=49 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 19713 chr11 93873015 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19714 chr11 93873313 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19715 chr11 93881428 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19716 chr11 93886838 . G C 49 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=45 PL:DP:SP:GT:GQ 81,9,0:3:0:1/1:63 | |
| 19717 chr11 93911856 . C T 5.46 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,44:2:0:0/1:37 | |
| 19718 chr11 93913036 . A G 99 . DP=73;AF1=0.5;CI95=0.5,0.5;DP4=15,24,12,16;MQ=49;PV4=0.8,3.5e-24,7.7e-27,0.45 PL:DP:SP:GT:GQ 190,0,255:67:1:0/1:99 | |
| 19719 chr11 93913458 . T C 62.1 . DP=32;AF1=1;CI95=1,1;DP4=0,0,1,6;MQ=49 PL:DP:SP:GT:GQ 95,21,0:7:0:1/1:84 | |
| 19720 chr11 93917100 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19721 chr11 93921716 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 19722 chr11 93921898 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19723 chr11 93922187 . C T 6.2 . DP=9;AF1=0.5005;CI95=0.5,0.5;DP4=0,1,0,2;MQ=49;PV4=1,0.15,0.33,1 PL:DP:SP:GT:GQ 35,0,26:3:0:0/1:28 | |
| 19724 chr11 93958601 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 19725 chr11 93960806 . T C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 19726 chr11 93974696 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19727 chr11 93977094 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19728 chr11 93978492 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 19729 chr11 93992224 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19730 chr11 94034097 . GC GCTACTGAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19731 chr11 94036507 . T TCTGGAGGGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19732 chr11 94048551 . C A 14.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 19733 chr11 94060124 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19734 chr11 94112596 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19735 chr11 94115715 . T G 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19736 chr11 94128322 . C G 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 19737 chr11 94130686 . GT GTACTCTTGAT 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19738 chr11 94137302 . t tTAGTAGG 9.15 . INDEL;DP=4;AF1=0.9966;CI95=0.5,1;DP4=0,1,0,1;MQ=35;PV4=1,1,1,1 PL:DP:SP:GT:GQ 45,1,0:2:0:1/1:23 | |
| 19739 chr11 94147917 . t tCCCCA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 19740 chr11 94152635 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19741 chr11 94168360 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19742 chr11 94176658 . CAACTCA C 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 19743 chr11 94190549 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19744 chr11 94197353 . T G 10.4 . DP=7;AF1=0.5;CI95=0.5,0.5;DP4=2,0,0,2;MQ=47;PV4=0.33,0.2,0.17,1 PL:DP:SP:GT:GQ 40,0,58:4:5:0/1:43 | |
| 19745 chr11 94199710 . C T 6.2 . DP=6;AF1=0.4999;CI95=0.5,0.5;DP4=0,4,0,2;MQ=47;PV4=1,0.0054,0.042,1 PL:DP:SP:GT:GQ 35,0,138:6:0:0/1:38 | |
| 19746 chr11 94209613 . G A 14.9 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47 PL:DP:SP:GT:GQ 46,6,0:2:0:1/1:49 | |
| 19747 chr11 94212149 . C T 3.54 . DP=4;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,3;MQ=50;PV4=1,0,1,1 PL:DP:SP:GT:GQ 31,0,35:4:0:0/1:33 | |
| 19748 chr11 94225018 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19749 chr11 94225920 . C T 99 . DP=20;AF1=0.5;CI95=0.5,0.5;DP4=8,2,7,1;MQ=47;PV4=1,0.00065,6.6e-08,1 PL:DP:SP:GT:GQ 152,0,255:18:0:0/1:99 | |
| 19750 chr11 94227671 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19751 chr11 94229070 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19752 chr11 94246281 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19753 chr11 94253577 . T C 28.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=44 PL:DP:SP:GT:GQ 60,6,0:2:0:1/1:49 | |
| 19754 chr11 94269205 . C T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 19755 chr11 94279792 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19756 chr11 94280858 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19757 chr11 94289947 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 19758 chr11 94292342 . G T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19759 chr11 94300826 . C A 4.77 . DP=11;AF1=0.4999;CI95=0.5,0.5;DP4=0,3,0,2;MQ=48;PV4=1,0.14,0.14,0.35 PL:DP:SP:GT:GQ 33,0,85:5:0:0/1:36 | |
| 19760 chr11 94314478 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19761 chr11 94316839 . T C 22 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=0,9,0,6;MQ=49;PV4=1,1.8e-09,0.044,1 PL:DP:SP:GT:GQ 52,0,206:15:0:0/1:55 | |
| 19762 chr11 94326627 . G A 99 . DP=19;AF1=1;CI95=1,1;DP4=0,0,17,0;MQ=47 PL:DP:SP:GT:GQ 132,51,0:17:0:1/1:99 | |
| 19763 chr11 94328406 . A C 3.01 . DP=20;AF1=0.4997;CI95=0.5,0.5;DP4=14,0,4,0;MQ=49;PV4=1,0.08,0.0077,0.34 PL:DP:SP:GT:GQ 30,0,190:18:0:0/1:33 | |
| 19764 chr11 94334923 . A G 45.1 . DP=14;AF1=1;CI95=0.5,1;DP4=0,0,6,0;MQ=48 PL:DP:SP:GT:GQ 78,18,0:6:0:1/1:90 | |
| 19765 chr11 94338912 . G A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 19766 chr11 94340853 . T C 4.29 . DP=11;AF1=0.5334;CI95=0.5,1;DP4=0,1,0,2;MQ=49;PV4=1,1,0.17,1 PL:DP:SP:GT:GQ 32,0,9:3:0:0/1:12 | |
| 19767 chr11 94368053 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 19768 chr11 94371151 . C G 19.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=46 PL:DP:SP:GT:GQ 51,6,0:2:0:1/1:49 | |
| 19769 chr11 94385896 . A C 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 19770 chr11 94407747 . aata aATata 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,42:2:0:0/1:43 | |
| 19771 chr11 94410073 . a aCGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19772 chr11 94412473 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19773 chr11 94420202 . t tCCGCATTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19774 chr11 94463261 . A G 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,1;MQ=42;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,42:2:0:0/1:33 | |
| 19775 chr11 94475160 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19776 chr11 94486870 . a aCTC 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19777 chr11 94487312 . ct cTGGt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19778 chr11 94500768 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 19779 chr11 94513376 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19780 chr11 94529768 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19781 chr11 94532061 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19782 chr11 94542680 . ACG A 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 19783 chr11 94554179 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19784 chr11 94563107 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19785 chr11 94563120 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19786 chr11 94564346 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19787 chr11 94576092 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19788 chr11 94584505 . TCTA T 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 19789 chr11 94587905 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 19790 chr11 94590925 . CAT CATGGACGTGAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19791 chr11 94611027 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19792 chr11 94618451 . G A 6.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 19793 chr11 94631411 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19794 chr11 94642991 . agg aGGATCCTCgg 7.36 . INDEL;DP=2;AF1=0.501;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,24:2:0:0/1:27 | |
| 19795 chr11 94652328 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19796 chr11 94652667 . cc cCCCTCGTc 6.55 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 43,0,44:2:0:0/1:43 | |
| 19797 chr11 94662678 . CT CTT 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19798 chr11 94669441 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19799 chr11 94683242 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19800 chr11 94684920 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 19801 chr11 94696670 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19802 chr11 94706290 . GG GGTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19803 chr11 94736040 . T A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 19804 chr11 94783202 . C T 9.31 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 19805 chr11 94795653 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 19806 chr11 94826854 . G GTCGGATA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19807 chr11 94901288 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19808 chr11 94910570 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19809 chr11 94933304 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19810 chr11 94955593 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19811 chr11 94970348 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19812 chr11 94999305 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19813 chr11 95021136 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19814 chr11 95028882 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19815 chr11 95034030 . TA TAGA 9.94 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 19816 chr11 95041644 . cctgact cct 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19817 chr11 95058680 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 19818 chr11 95060478 . A AGC 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19819 chr11 95095971 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19820 chr11 95105613 . A T 11.3 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 19821 chr11 95110065 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19822 chr11 95110496 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19823 chr11 95116499 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19824 chr11 95121122 . CTAACTT CT 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19825 chr11 95184169 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 19826 chr11 95186307 . T C 14.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47 PL:DP:SP:GT:GQ 46,6,0:2:0:1/1:49 | |
| 19827 chr11 95195484 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19828 chr11 95237890 . T A 7.03 . DP=2;AF1=0.508;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,15:2:0:0/1:18 | |
| 19829 chr11 95241951 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19830 chr11 95255050 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19831 chr11 95264270 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19832 chr11 95273124 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 19833 chr11 95339376 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 19834 chr11 95345194 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19835 chr11 95347533 . A C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 19836 chr11 95359332 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19837 chr11 95375487 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19838 chr11 95379689 . a aTG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,38:2:0:0/1:40 | |
| 19839 chr11 95440544 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 19840 chr11 95456688 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19841 chr11 95460935 . T G 10.2 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 41,6,0:2:0:1/1:49 | |
| 19842 chr11 95473685 . a aAT 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 19843 chr11 95480334 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 19844 chr11 95492975 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19845 chr11 95512060 . A G 39.2 . DP=19;AF1=0.5207;CI95=0.5,1;DP4=0,1,0,4;MQ=47;PV4=1,1,0.12,1 PL:DP:SP:GT:GQ 69,0,11:5:0:0/1:14 | |
| 19846 chr11 95516536 . A G 18.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47 PL:DP:SP:GT:GQ 50,6,0:2:0:1/1:49 | |
| 19847 chr11 95520357 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19848 chr11 95521648 . A G 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19849 chr11 95523810 . A G 8.64 . DP=7;AF1=0.5;CI95=0.5,0.5;DP4=2,1,4,0;MQ=50;PV4=0.43,0.00099,0.22,1 PL:DP:SP:GT:GQ 38,0,113:7:0:0/1:41 | |
| 19850 chr11 95546829 . T G 6.33 . DP=8;AF1=0.5206;CI95=0.5,1;DP4=0,1,0,2;MQ=47;PV4=1,1,0.33,1 PL:DP:SP:GT:GQ 35,0,11:3:0:0/1:14 | |
| 19851 chr11 95551136 . C T 8.64 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=0,7,0,2;MQ=48;PV4=1,0.45,0.0051,1 PL:DP:SP:GT:GQ 38,0,139:9:0:0/1:41 | |
| 19852 chr11 95552672 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19853 chr11 95552927 . TA TAGAA 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 19854 chr11 95555630 . A C 3.12 . DP=6;AF1=0.5261;CI95=0.5,0.5;DP4=1,0,3,0;MQ=48;PV4=1,1,0.39,0.14 PL:DP:SP:GT:GQ 30,0,10:4:0:0/1:13 | |
| 19855 chr11 95556494 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19856 chr11 95561161 . C G 15.3 . DP=17;AF1=0.5263;CI95=0.5,1;DP4=1,0,0,4;MQ=47;PV4=0.2,0.41,1,0.16 PL:DP:SP:GT:GQ 45,0,10:5:0:0/1:13 | |
| 19857 chr11 95569927 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19858 chr11 95575361 . G C 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19859 chr11 95591060 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19860 chr11 95688308 . GAAT G 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19861 chr11 95695495 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19862 chr11 95699612 . gcc gCCCCACCCcc 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 19863 chr11 95702470 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19864 chr11 95712222 . C T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 19865 chr11 95724415 . GC GCTAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19866 chr11 95726931 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19867 chr11 95748389 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 19868 chr11 95767648 . A T 6.79 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=49 PL:DP:SP:GT:GQ 37,6,0:2:0:1/1:49 | |
| 19869 chr11 95785302 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 19870 chr11 95816310 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19871 chr11 95842679 . gc gCGGAGGCc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19872 chr11 95844643 . T A 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 19873 chr11 95851281 . G T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19874 chr11 95899264 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19875 chr11 95900815 . T TA 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 19876 chr11 95904275 . TTTTCTTT TTTT 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 19877 chr11 95925095 . C G 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19878 chr11 95965054 . G A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 19879 chr11 95974342 . C G 34.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=45 PL:DP:SP:GT:GQ 66,6,0:2:0:1/1:49 | |
| 19880 chr11 95980797 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19881 chr11 95986384 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19882 chr11 96015885 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19883 chr11 96036323 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 19884 chr11 96037430 . T TTTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19885 chr11 96045676 . G T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19886 chr11 96068999 . T TAACGC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 19887 chr11 96070453 . C G 4.77 . DP=2;AF1=0.5002;CI95=0.5,0.5;DP4=0,1,0,1;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,29:2:0:0/1:31 | |
| 19888 chr11 96092376 . C T 99 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=42 PL:DP:SP:GT:GQ 142,15,0:5:0:1/1:75 | |
| 19889 chr11 96098322 . caaaaaa cAAAAaaaaaa 7.49 . INDEL;DP=2;AF1=0.5207;CI95=0.5,1;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,11:2:0:0/1:14 | |
| 19890 chr11 96104109 . GAT GATCCGTCAT 3.25 . INDEL;DP=8;AF1=0.5;CI95=0.5,0.5;DP4=3,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,45:4:0:0/1:40 | |
| 19891 chr11 96104111 . T TAA 5.08 . INDEL;DP=8;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,36:2:0:0/1:38 | |
| 19892 chr11 96104119 . T A 4.61 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=49 PL:DP:SP:GT:GQ 34,6,0:2:0:1/1:49 | |
| 19893 chr11 96106580 . A T 4.77 . DP=9;AF1=0.4999;CI95=0.5,0.5;DP4=5,1,0,3;MQ=49;PV4=0.048,0.068,0.036,0.11 PL:DP:SP:GT:GQ 33,0,167:9:13:0/1:36 | |
| 19894 chr11 96106661 . C G 3.01 . DP=11;AF1=0.4997;CI95=0.5,0.5;DP4=0,6,0,5;MQ=50;PV4=1,0.00029,1,1 PL:DP:SP:GT:GQ 30,0,160:11:0:0/1:33 | |
| 19895 chr11 96116444 . T C 7.8 . DP=6;AF1=0.5;CI95=0.5,0.5;DP4=0,2,1,1;MQ=49;PV4=1,0.23,0.019,1 PL:DP:SP:GT:GQ 37,0,57:4:0:0/1:40 | |
| 19896 chr11 96123734 . TG TGG 97.5 . INDEL;DP=18;AF1=0.5;CI95=0.5,0.5;DP4=9,0,8,0;MQ=50;PV4=1,1,1,0.49 PL:DP:SP:GT:GQ 135,0,124:17:0:0/1:99 | |
| 19897 chr11 96124775 . C A 4.13 . DP=4;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,2,0;MQ=49;PV4=1,0.063,0.33,0.29 PL:DP:SP:GT:GQ 32,0,39:3:0:0/1:34 | |
| 19898 chr11 96125435 . CTTT CT 51.5 . INDEL;DP=10;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,4;MQ=50;PV4=1,0.25,1,0.49 PL:DP:SP:GT:GQ 89,0,87:7:0:0/1:88 | |
| 19899 chr11 96129482 . T C 7.11 . DP=2;AF1=0.5206;CI95=0.5,1;DP4=0,1,1,0;MQ=48;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,11:2:0:0/1:14 | |
| 19900 chr11 96157203 . AT ATCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19901 chr11 96159266 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19902 chr11 96186897 . tgtg t 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19903 chr11 96225631 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19904 chr11 96265915 . T G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 19905 chr11 96276821 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19906 chr11 96447032 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19907 chr11 96449464 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19908 chr11 96485762 . ca cAGa 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 19909 chr11 96510202 . T A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 19910 chr11 96517872 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 19911 chr11 96519133 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19912 chr11 96531847 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19913 chr11 96560843 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19914 chr11 96577802 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19915 chr11 96578567 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19916 chr11 96655505 . CA CATTAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19917 chr11 96666789 . A C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19918 chr11 96695157 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19919 chr11 96696454 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19920 chr11 96698050 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 19921 chr11 96707241 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19922 chr11 96721949 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19923 chr11 96730764 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19924 chr11 96730767 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19925 chr11 96734389 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19926 chr11 96756511 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19927 chr11 96757162 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19928 chr11 96786494 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19929 chr11 96786747 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 19930 chr11 96802756 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19931 chr11 96824098 . g gATA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19932 chr11 96847953 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 19933 chr11 96879194 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19934 chr11 96893143 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19935 chr11 96902899 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19936 chr11 96906973 . A C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 19937 chr11 96916507 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19938 chr11 96920310 . A T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 19939 chr11 96927213 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 19940 chr11 96935970 . a aGTGGTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19941 chr11 97032579 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 19942 chr11 97033383 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19943 chr11 97065755 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19944 chr11 97083287 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 19945 chr11 97109231 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19946 chr11 97126436 . T C 6.02 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=48 PL:DP:SP:GT:GQ 36,6,0:2:0:1/1:49 | |
| 19947 chr11 97127903 . a aT 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19948 chr11 97137790 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19949 chr11 97158050 . T C 21.1 . DP=7;AF1=0.502;CI95=0.5,0.5;DP4=0,1,0,3;MQ=48;PV4=1,0.12,0.25,1 PL:DP:SP:GT:GQ 51,0,21:4:0:0/1:24 | |
| 19950 chr11 97160937 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 19951 chr11 97177854 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19952 chr11 97194354 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19953 chr11 97202555 . ACG A 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 19954 chr11 97205160 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19955 chr11 97211064 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 19956 chr11 97216731 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19957 chr11 97227528 . G C 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 19958 chr11 97257017 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19959 chr11 97268355 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19960 chr11 97284496 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19961 chr11 97297310 . A C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19962 chr11 97323507 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19963 chr11 97323511 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19964 chr11 97345225 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19965 chr11 97367537 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19966 chr11 97392061 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 19967 chr11 97393019 . tctcagc tc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19968 chr11 97398933 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19969 chr11 97419835 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 19970 chr11 97421281 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19971 chr11 97446473 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19972 chr11 97487396 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 19973 chr11 97503455 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19974 chr11 97530883 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 19975 chr11 97541733 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19976 chr11 97554637 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19977 chr11 97567929 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19978 chr11 97569120 . C A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 19979 chr11 97573396 . TT TTCT 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 19980 chr11 97599027 . caa cAAATTTCAAaa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19981 chr11 97678863 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 19982 chr11 97681461 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 19983 chr11 97701867 . CA CAGTCTAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19984 chr11 97751651 . a aGAG 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19985 chr11 97757808 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19986 chr11 97784390 . t tCAGTTGGACTCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19987 chr11 97800152 . aa aAACa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19988 chr11 97804011 . gt gTt 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 19989 chr11 97812741 . a aTGAGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19990 chr11 97847773 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 19991 chr11 97850084 . T TAAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19992 chr11 97857093 . gc gCGTAACAc 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 19993 chr11 97868854 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19994 chr11 97878403 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 19995 chr11 97880286 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 19996 chr11 97915191 . a aGT 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 19997 chr11 97947780 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 19998 chr11 97969304 . C CGTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 19999 chr11 97995149 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20000 chr11 98059279 . agt aGTGGgt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20001 chr11 98062815 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20002 chr11 98068129 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20003 chr11 98104588 . A G 27.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=35 PL:DP:SP:GT:GQ 59,6,0:2:0:1/1:49 | |
| 20004 chr11 98104605 . T C 37.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=35 PL:DP:SP:GT:GQ 69,6,0:2:0:1/1:49 | |
| 20005 chr11 98104696 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20006 chr11 98120799 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20007 chr11 98126547 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20008 chr11 98129696 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20009 chr11 98135655 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20010 chr11 98158822 . T C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 20011 chr11 98183451 . A AGAACTCAGTCAGGAG 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 20012 chr11 98204468 . T A 9.31 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 20013 chr11 98232041 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20014 chr11 98238832 . TG TGAAAACGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20015 chr11 98242141 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20016 chr11 98243863 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20017 chr11 98243886 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20018 chr11 98254824 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20019 chr11 98292043 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 20020 chr11 98298955 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=46 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20021 chr11 98303788 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20022 chr11 98308804 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20023 chr11 98326649 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20024 chr11 98334936 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 20025 chr11 98343797 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20026 chr11 98345298 . GT GTGAAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20027 chr11 98354829 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20028 chr11 98364324 . C G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 20029 chr11 98376375 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20030 chr11 98382916 . C A 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 20031 chr11 98405846 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20032 chr11 98409551 . CT CTAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20033 chr11 98428576 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 20034 chr11 98436183 . C CA 53.7 . INDEL;DP=5;AF1=1;CI95=0.5,1;DP4=0,0,2,3;MQ=33 PL:DP:SP:GT:GQ 94,15,0:5:0:1/1:75 | |
| 20035 chr11 98436527 . A C 53.5 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,2,2;MQ=48 PL:DP:SP:GT:GQ 86,12,0:4:0:1/1:72 | |
| 20036 chr11 98436571 . T C 3.54 . DP=5;AF1=0.4998;CI95=0.5,0.5;DP4=0,3,0,1;MQ=48;PV4=1,0.47,0.021,0.21 PL:DP:SP:GT:GQ 31,0,96:4:0:0/1:34 | |
| 20037 chr11 98437246 . C T 8.64 . DP=4;AF1=0.5;CI95=0.5,0.5;DP4=2,0,2,0;MQ=48;PV4=1,0.36,0.0099,1 PL:DP:SP:GT:GQ 38,0,49:4:0:0/1:41 | |
| 20038 chr11 98446121 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20039 chr11 98447560 . A AGCTC 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 20040 chr11 98489474 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=46 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20041 chr11 98506523 . ga gAATa 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 20042 chr11 98511067 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20043 chr11 98527086 . a aTACG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 20044 chr11 98536195 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20045 chr11 98549212 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20046 chr11 98556925 . G T 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 20047 chr11 98587884 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20048 chr11 98597640 . G C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 20049 chr11 98598542 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20050 chr11 98604724 . G A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 20051 chr11 98610518 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20052 chr11 98617572 . T C 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20053 chr11 98630372 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 20054 chr11 98637411 . C CTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20055 chr11 98649107 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 20056 chr11 98653838 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20057 chr11 98667259 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20058 chr11 98669623 . CA CACCTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20059 chr11 98699963 . g gAACTTA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20060 chr11 98701867 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 20061 chr11 98715573 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20062 chr11 98724695 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20063 chr11 98724700 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20064 chr11 98734824 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 20065 chr11 98752645 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 20066 chr11 98755342 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20067 chr11 98755714 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20068 chr11 98767771 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20069 chr11 98793849 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20070 chr11 98840665 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 20071 chr11 98842859 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20072 chr11 98845368 . A C 7.8 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 20073 chr11 98848516 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20074 chr11 98853867 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 20075 chr11 98860590 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20076 chr11 98863084 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 20077 chr11 98873394 . g gA 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20078 chr11 98909179 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20079 chr11 98920956 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 20080 chr11 98928702 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20081 chr11 98956981 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 20082 chr11 98996471 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20083 chr11 99081108 . T A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 20084 chr11 99108414 . aa aACa 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 20085 chr11 99114696 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20086 chr11 99117478 . T TTATG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20087 chr11 99132105 . G A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 20088 chr11 99148166 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20089 chr11 99170962 . tt tTAt 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 20090 chr11 99199761 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20091 chr11 99209011 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20092 chr11 99211153 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 20093 chr11 99216693 . G A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 20094 chr11 99235361 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20095 chr11 99245702 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 20096 chr11 99285540 . T A 12.3 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 20097 chr11 99290364 . A AAATTTCTGAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20098 chr11 99298125 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20099 chr11 99300394 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 20100 chr11 99327705 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20101 chr11 99329045 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20102 chr11 99346798 . C A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 20103 chr11 99348423 . G A 4.15 . DP=2;AF1=0.5049;CI95=0.5,0.5;DP4=0,1,1,0;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,17:2:0:0/1:20 | |
| 20104 chr11 99348451 . g gGA 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 20105 chr11 99352145 . TT TTACGGGAT 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20106 chr11 99375405 . CAG CAGATGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20107 chr11 99396968 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20108 chr11 99406086 . AC ACTTCTTCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20109 chr11 99413469 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20110 chr11 99415815 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20111 chr11 99418620 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 20112 chr11 99419706 . t tGCGAGACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20113 chr11 99441760 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 20114 chr11 99462351 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20115 chr11 99492768 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20116 chr11 99511408 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20117 chr11 99514233 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20118 chr11 99514237 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20119 chr11 99524294 . TA TAGGGAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20120 chr11 99540233 . TT TTAT 4.42 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 20121 chr11 99569837 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 20122 chr11 99585838 . gt gTCTACt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20123 chr11 99587175 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20124 chr11 99595023 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20125 chr11 99619219 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20126 chr11 99623829 . T G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 20127 chr11 99625073 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20128 chr11 99633688 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 20129 chr11 99670013 . A C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 20130 chr11 99675945 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 20131 chr11 99678061 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20132 chr11 99678681 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 20133 chr11 99716656 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20134 chr11 99727357 . A AG 15.4 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=50 PL:DP:SP:GT:GQ 54,6,0:2:0:1/1:49 | |
| 20135 chr11 99743831 . agg aGgg 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20136 chr11 99845294 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20137 chr11 99912154 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20138 chr11 99960156 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20139 chr11 99980182 . CC CCGTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20140 chr11 99999358 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20141 chr11 100011591 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20142 chr11 100014648 . GT GTGCTCAAT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 20143 chr11 100032803 . aa aACa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20144 chr11 100034148 . AATATAT AAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20145 chr11 100061193 . CT CTCGTT 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 20146 chr11 100102771 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 20147 chr11 100130525 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20148 chr11 100241109 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20149 chr11 100255555 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 20150 chr11 100264344 . T TAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20151 chr11 100270504 . TTAA T 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 20152 chr11 100290598 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20153 chr11 100291738 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 20154 chr11 100322625 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 20155 chr11 100353796 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20156 chr11 100359566 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 20157 chr11 100360513 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20158 chr11 100370263 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20159 chr11 100370531 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20160 chr11 100395966 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20161 chr11 100406237 . AG AGTAACCCCTGTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20162 chr11 100416730 . G A 3.01 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,30:2:0:0/1:30 | |
| 20163 chr11 100441375 . CA CAGTGTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20164 chr11 100443892 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20165 chr11 100461317 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20166 chr11 100466163 . ATT ATTTCACTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20167 chr11 100515334 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 20168 chr11 100530274 . gttggtat gt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20169 chr11 100580295 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20170 chr11 100587257 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 20171 chr11 100588604 . C T 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20172 chr11 100626811 . G T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20173 chr11 100665240 . cta c 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 20174 chr11 100689270 . a aCCCCCCGAAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20175 chr11 100697578 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20176 chr11 100708252 . C T 3.02 . DP=2;AF1=0.5002;CI95=0.5,0.5;DP4=1,0,0,1;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,27:2:0:0/1:28 | |
| 20177 chr11 100708799 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20178 chr11 100709111 . A C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20179 chr11 100722866 . T G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 20180 chr11 100741497 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20181 chr11 100794592 . T A 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20182 chr11 100800025 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20183 chr11 100811574 . catat cat 57.2 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=50 PL:DP:SP:GT:GQ 96,6,0:2:0:1/1:49 | |
| 20184 chr11 100816419 . T G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 20185 chr11 100817190 . T G 3.05 . DP=2;AF1=0.5078;CI95=0.5,0.5;DP4=0,1,1,0;MQ=43;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,15:2:0:0/1:18 | |
| 20186 chr11 100826912 . ACATCAT ACAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20187 chr11 100833878 . A G 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,40:2:0:0/1:34 | |
| 20188 chr11 100863485 . G C 9.31 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 20189 chr11 100863595 . TGTCTGTGG TGTCTGTGGGTCTGTGG 29.2 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=50 PL:DP:SP:GT:GQ 68,6,0:2:0:1/1:49 | |
| 20190 chr11 100865232 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20191 chr11 100872018 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20192 chr11 100892602 . T TCCAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20193 chr11 100909809 . A G 7.8 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=7,0,2,0;MQ=49;PV4=1,0.17,6.1e-05,1 PL:DP:SP:GT:GQ 37,0,172:9:0:0/1:40 | |
| 20194 chr11 100929140 . C CGTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20195 chr11 100952652 . a aAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20196 chr11 101000249 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20197 chr11 101000956 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 20198 chr11 101046311 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20199 chr11 101055312 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20200 chr11 101059459 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 20201 chr11 101059488 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20202 chr11 101079923 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 20203 chr11 101088541 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20204 chr11 101096134 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20205 chr11 101097462 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20206 chr11 101157644 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20207 chr11 101176180 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 20208 chr11 101179658 . C T 6.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 20209 chr11 101199519 . G C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 20210 chr11 101208871 . t tTACTACGTG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 20211 chr11 101229283 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 20212 chr11 101244383 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 20213 chr11 101248815 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20214 chr11 101250974 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20215 chr11 101253338 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20216 chr11 101270791 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 20217 chr11 101291266 . A C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20218 chr11 101323856 . TAAGAAG TAAG 99 . INDEL;DP=14;AF1=0.5;CI95=0.5,0.5;DP4=0,7,0,6;MQ=50;PV4=1,0.11,1,1 PL:DP:SP:GT:GQ 169,0,178:13:0:0/1:99 | |
| 20219 chr11 101342775 . G T 4.13 . DP=4;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,38:2:0:0/1:34 | |
| 20220 chr11 101344177 . G A 11.3 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=5,0,3,0;MQ=49;PV4=1,6.2e-05,0.11,1 PL:DP:SP:GT:GQ 41,0,158:8:0:0/1:44 | |
| 20221 chr11 101344254 . A G 16.1 . DP=5;AF1=0.5;CI95=0.5,0.5;DP4=0,1,2,0;MQ=47;PV4=0.33,0,0,1 PL:DP:SP:GT:GQ 46,0,41:3:0:0/1:43 | |
| 20222 chr11 101388927 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 20223 chr11 101400697 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20224 chr11 101424284 . G A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 20225 chr11 101431139 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 20226 chr11 101447797 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 20227 chr11 101449047 . CTTT C 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20228 chr11 101454842 . CCT CCTCT 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 20229 chr11 101468689 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20230 chr11 101473953 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20231 chr11 101484620 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 20232 chr11 101489027 . TACA TACACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20233 chr11 101519144 . gctt gCTTGActt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20234 chr11 101542148 . A ATCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20235 chr11 101557219 . T TCCGC 7.35 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 20236 chr11 101620207 . T C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 20237 chr11 101622328 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 20238 chr11 101630387 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20239 chr11 101646014 . G C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 20240 chr11 101695051 . A C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 20241 chr11 101758875 . g gCGGCAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20242 chr11 101763687 . G T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 20243 chr11 101771248 . G A 99 . DP=27;AF1=1;CI95=1,1;DP4=0,0,10,16;MQ=43 PL:DP:SP:GT:GQ 255,78,0:26:0:1/1:99 | |
| 20244 chr11 101775724 . C T 13.2 . DP=5;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,2;MQ=49;PV4=1,0.1,0.14,1 PL:DP:SP:GT:GQ 43,0,102:5:0:0/1:46 | |
| 20245 chr11 101778710 . A G 17.1 . DP=8;AF1=0.5;CI95=0.5,0.5;DP4=1,3,0,3;MQ=49;PV4=1,0.00029,0.033,1 PL:DP:SP:GT:GQ 47,0,157:7:0:0/1:50 | |
| 20246 chr11 101783837 . T C 17.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=38 PL:DP:SP:GT:GQ 49,6,0:2:0:1/1:49 | |
| 20247 chr11 101786973 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 20248 chr11 101806628 . C T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 20249 chr11 101818728 . A G 7.8 . DP=10;AF1=0.5;CI95=0.5,0.5;DP4=2,0,3,0;MQ=49;PV4=1,0.015,0.25,1 PL:DP:SP:GT:GQ 37,0,74:5:0:0/1:40 | |
| 20250 chr11 101821605 . cca cCAca 3.8 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 39,0,44:2:0:0/1:41 | |
| 20251 chr11 101832478 . G T 20 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=49 PL:DP:SP:GT:GQ 52,9,0:3:0:1/1:63 | |
| 20252 chr11 101840896 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20253 chr11 101848990 . A G 6.98 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 20254 chr11 101857758 . G A 5.46 . DP=24;AF1=0.5;CI95=0.5,0.5;DP4=0,2,1,2;MQ=49;PV4=1,0.12,0.25,1 PL:DP:SP:GT:GQ 34,0,33:5:0:0/1:33 | |
| 20255 chr11 101868319 . C G 26.2 . DP=7;AF1=0.7303;CI95=0.5,1;DP4=1,0,3,0;MQ=44;PV4=1,1,0.0037,1 PL:DP:SP:GT:GQ 55,0,2:4:0:0/1:3 | |
| 20256 chr11 101886195 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 20257 chr11 101927839 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20258 chr11 101932494 . A T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 20259 chr11 101948191 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20260 chr11 101954215 . A C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 20261 chr11 101984826 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20262 chr11 101999734 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20263 chr11 102042145 . A AGGCACACGCCAAGCAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20264 chr11 102057731 . GG GGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20265 chr11 102068778 . TCT TCTACT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20266 chr11 102095705 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20267 chr11 102102343 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20268 chr11 102113913 . G A 16.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 48,6,0:2:0:1/1:49 | |
| 20269 chr11 102138506 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20270 chr11 102142809 . ATTT AT 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 20271 chr11 102143352 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20272 chr11 102176674 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20273 chr11 102203673 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 20274 chr11 102207851 . G A 52 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=45 PL:DP:SP:GT:GQ 84,9,0:3:0:1/1:63 | |
| 20275 chr11 102214129 . t tCC 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 20276 chr11 102228888 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20277 chr11 102246096 . A AG 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 20278 chr11 102250571 . A T 8.65 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20279 chr11 102250606 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 20280 chr11 102257159 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20281 chr11 102312424 . cagag cAGAGTCTAagag 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20282 chr11 102319364 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20283 chr11 102328991 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20284 chr11 102333837 . C G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 20285 chr11 102337602 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20286 chr11 102348900 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20287 chr11 102394195 . T G 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20288 chr11 102394389 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20289 chr11 102395843 . TC TCGCC 7.52 . INDEL;DP=4;AF1=0.5263;CI95=0.5,1;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,10:2:0:0/1:13 | |
| 20290 chr11 102403284 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 20291 chr11 102407261 . T G 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20292 chr11 102418426 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 20293 chr11 102427945 . G T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20294 chr11 102429015 . C G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 20295 chr11 102448558 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20296 chr11 102477515 . T C 7.8 . DP=10;AF1=0.5;CI95=0.5,0.5;DP4=0,5,0,3;MQ=49;PV4=1,0.001,0.021,1 PL:DP:SP:GT:GQ 37,0,152:8:0:0/1:40 | |
| 20297 chr11 102499275 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20298 chr11 102514250 . C A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 20299 chr11 102521294 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20300 chr11 102525011 . a aGTGT 12.7 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20301 chr11 102537955 . AT ATTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20302 chr11 102556482 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=46 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20303 chr11 102570822 . A T 9.31 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=50 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 20304 chr11 102573396 . C G 65 . DP=12;AF1=1;CI95=1,1;DP4=0,0,10,0;MQ=49 PL:DP:SP:GT:GQ 98,30,0:10:0:1/1:99 | |
| 20305 chr11 102573451 . T C 96 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=9,2,10,0;MQ=47;PV4=0.48,0.00049,0.0055,0.47 PL:DP:SP:GT:GQ 126,0,253:21:3:0/1:99 | |
| 20306 chr11 102576412 . T G 4.13 . DP=6;AF1=0.4998;CI95=0.5,0.5;DP4=3,1,0,2;MQ=48;PV4=0.4,0.053,0.14,0.25 PL:DP:SP:GT:GQ 32,0,144:6:4:0/1:35 | |
| 20307 chr11 102583452 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20308 chr11 102584607 . T C 43.1 . DP=26;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=49 PL:DP:SP:GT:GQ 76,21,0:7:0:1/1:84 | |
| 20309 chr11 102592049 . Ttgtgtgtgtgtgtgtgtgtgt TTGTGtgtgtgtgtgtgtgtgtgtgt 29.4 . INDEL;DP=5;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=28 PL:DP:SP:GT:GQ 69,9,0:3:0:1/1:63 | |
| 20310 chr11 102593248 . T C 31.3 . DP=54;AF1=1;CI95=0.5,1;DP4=0,0,1,4;MQ=50 PL:DP:SP:GT:GQ 64,15,0:5:0:1/1:75 | |
| 20311 chr11 102628226 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20312 chr11 102628319 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20313 chr11 102629964 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20314 chr11 102642716 . AT ATT 91.7 . INDEL;DP=8;AF1=0.5336;CI95=0.5,1;DP4=1,0,6,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 129,0,9:7:0:0/1:12 | |
| 20315 chr11 102647207 . C G 27 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=1,2,0,3;MQ=47;PV4=1,0.12,0.11,1 PL:DP:SP:GT:GQ 57,0,96:6:0:0/1:60 | |
| 20316 chr11 102647310 . T G 99 . DP=25;AF1=1;CI95=1,1;DP4=0,0,19,0;MQ=47 PL:DP:SP:GT:GQ 158,57,0:19:0:1/1:99 | |
| 20317 chr11 102649543 . T A 3.02 . DP=25;AF1=0.5007;CI95=0.5,0.5;DP4=0,1,0,2;MQ=49;PV4=1,0.2,0.33,1 PL:DP:SP:GT:GQ 30,0,24:3:0:0/1:26 | |
| 20318 chr11 102661579 . CAT C 99 . INDEL;DP=19;AF1=0.5;CI95=0.5,0.5;DP4=0,9,0,7;MQ=50;PV4=1,1,1,0.42 PL:DP:SP:GT:GQ 168,0,123:16:0:0/1:99 | |
| 20319 chr11 102662140 . C T 90 . DP=31;AF1=0.5;CI95=0.5,0.5;DP4=4,13,4,7;MQ=49;PV4=0.67,1.9e-07,0.00046,1 PL:DP:SP:GT:GQ 120,0,255:28:2:0/1:99 | |
| 20320 chr11 102666164 . T C 99 . DP=26;AF1=0.5;CI95=0.5,0.5;DP4=3,2,15,4;MQ=46;PV4=0.57,0.018,0.0002,1 PL:DP:SP:GT:GQ 219,0,98:24:2:0/1:99 | |
| 20321 chr11 102666316 . T C 6.02 . DP=26;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=48 PL:DP:SP:GT:GQ 36,6,0:2:0:1/1:49 | |
| 20322 chr11 102668702 . T C 52.5 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=47 PL:DP:SP:GT:GQ 85,12,0:4:0:1/1:72 | |
| 20323 chr11 102674278 . gct g 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 20324 chr11 102678441 . G A 87 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,1;MQ=42 PL:DP:SP:GT:GQ 119,9,0:3:0:1/1:63 | |
| 20325 chr11 102702852 . T C 8.02 . DP=7;AF1=0.5335;CI95=0.5,1;DP4=0,1,0,2;MQ=49;PV4=1,1,0,0.3 PL:DP:SP:GT:GQ 37,0,9:3:0:0/1:12 | |
| 20326 chr11 102705401 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20327 chr11 102709425 . A G 77 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=0,7,1,7;MQ=48;PV4=1,0.00038,0.00031,0.48 PL:DP:SP:GT:GQ 107,0,167:15:0:0/1:99 | |
| 20328 chr11 102711338 . T C 42 . DP=11;AF1=0.5;CI95=0.5,0.5;DP4=0,4,1,4;MQ=48;PV4=1,4.1e-05,0.0087,1 PL:DP:SP:GT:GQ 72,0,128:9:0:0/1:75 | |
| 20329 chr11 102714149 . G T 3.01 . DP=7;AF1=0.4998;CI95=0.5,0.5;DP4=2,0,2,0;MQ=49;PV4=1,0.33,0.21,0.19 PL:DP:SP:GT:GQ 30,0,39:4:0:0/1:32 | |
| 20330 chr11 102720073 . TAT TATACTGCAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20331 chr11 102727291 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20332 chr11 102750655 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20333 chr11 102751523 . G C 21 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=2,1,2,0;MQ=47;PV4=1,0.41,0.00047,0.053 PL:DP:SP:GT:GQ 51,0,91:5:0:0/1:54 | |
| 20334 chr11 102766175 . cc cCAc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20335 chr11 102772174 . tt tTGAGGAAAt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20336 chr11 102795786 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 20337 chr11 102802518 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 20338 chr11 102804818 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20339 chr11 102829569 . gc gCCAc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20340 chr11 102841568 . TAAA T 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20341 chr11 102866405 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20342 chr11 102879010 . AG AGG 4.42 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 20343 chr11 102911490 . T C 4.77 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20344 chr11 102960157 . CTT CTTGGTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20345 chr11 102967221 . T G 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,43:2:0:0/1:34 | |
| 20346 chr11 102972310 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 20347 chr11 102980178 . C T 6.2 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,43:2:0:0/1:37 | |
| 20348 chr11 102984202 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 20349 chr11 102985709 . gtggca gTGGCAGACtggca 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20350 chr11 102986173 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20351 chr11 102989459 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20352 chr11 103016864 . A C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20353 chr11 103048639 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20354 chr11 103049904 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20355 chr11 103053091 . G GCTCAGATT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20356 chr11 103063467 . C A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 20357 chr11 103074181 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 20358 chr11 103087925 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 20359 chr11 103108078 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20360 chr11 103129874 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20361 chr11 103137080 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20362 chr11 103176441 . TAGTCAGT TAGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20363 chr11 103200088 . T TG 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 20364 chr11 103202991 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20365 chr11 103203001 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20366 chr11 103216056 . C A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 20367 chr11 103231408 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20368 chr11 103235726 . TT TTCT 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 20369 chr11 103241801 . gc gCACc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20370 chr11 103264759 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20371 chr11 103264785 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20372 chr11 103277785 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20373 chr11 103286596 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20374 chr11 103293770 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20375 chr11 103321116 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20376 chr11 103354400 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 20377 chr11 103355000 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20378 chr11 103360603 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20379 chr11 103364176 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20380 chr11 103385519 . g gCGCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20381 chr11 103394181 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20382 chr11 103400088 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20383 chr11 103402271 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20384 chr11 103416097 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20385 chr11 103453417 . G T 6.98 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 20386 chr11 103463176 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20387 chr11 103490728 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20388 chr11 103496727 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20389 chr11 103511272 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20390 chr11 103521930 . a aGATCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20391 chr11 103540932 . T C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 20392 chr11 103547018 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20393 chr11 103570165 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20394 chr11 103589816 . G C 7.8 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 20395 chr11 103600606 . a aCGGCTGCGCCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20396 chr11 103621487 . T A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 20397 chr11 103641047 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20398 chr11 103647472 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20399 chr11 103654986 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20400 chr11 103674163 . tcccc tCCcccc 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,41:2:0:0/1:42 | |
| 20401 chr11 103675499 . TATA T 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 20402 chr11 103714239 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20403 chr11 103716983 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20404 chr11 103752873 . C CTGAACTGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20405 chr11 103769299 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 20406 chr11 103780455 . A G 93 . DP=60;AF1=0.5;CI95=0.5,0.5;DP4=8,24,9,14;MQ=50;PV4=0.38,3.2e-28,0.049,1 PL:DP:SP:GT:GQ 123,0,255:55:4:0/1:99 | |
| 20407 chr11 103780610 . C T 9.52 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=0,9,0,4;MQ=49;PV4=1,0.0042,0.0026,1 PL:DP:SP:GT:GQ 39,0,192:13:0:0/1:42 | |
| 20408 chr11 103780695 . G A 3.54 . DP=5;AF1=0.4998;CI95=0.5,0.5;DP4=1,2,0,1;MQ=48;PV4=1,0.26,0,0.099 PL:DP:SP:GT:GQ 31,0,127:4:0:0/1:34 | |
| 20409 chr11 103780837 . TAAG T 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 20410 chr11 103786523 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20411 chr11 103799049 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20412 chr11 103834729 . CT CTAAT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 20413 chr11 103841654 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20414 chr11 103876464 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20415 chr11 103882070 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20416 chr11 103885038 . a aGCACG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20417 chr11 103908547 . G T 4.77 . DP=24;AF1=0.4999;CI95=0.5,0.5;DP4=4,2,6,0;MQ=48;PV4=0.45,0.065,0.043,1 PL:DP:SP:GT:GQ 33,0,132:12:3:0/1:36 | |
| 20418 chr11 103908628 . T C 13.2 . DP=27;AF1=0.5;CI95=0.5,0.5;DP4=10,5,0,6;MQ=49;PV4=0.012,0.045,1.7e-06,0.012 PL:DP:SP:GT:GQ 43,0,255:21:19:0/1:46 | |
| 20419 chr11 103918806 . T G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 20420 chr11 103923386 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20421 chr11 103923859 . A C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20422 chr11 103934501 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20423 chr11 103934699 . ACTC AC 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 20424 chr11 103947218 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 20425 chr11 103951418 . GTATA GTA 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 20426 chr11 103956958 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20427 chr11 103967388 . GT GTCTACT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20428 chr11 103976925 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 20429 chr11 104003647 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 20430 chr11 104007572 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20431 chr11 104013782 . CAGGT CAGGTAGGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20432 chr11 104031502 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 20433 chr11 104083176 . G C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 20434 chr11 104089591 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 20435 chr11 104099348 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20436 chr11 104120002 . ATGTGT ATGTGTGT 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 20437 chr11 104130289 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20438 chr11 104160374 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 20439 chr11 104167012 . tac tACac 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 20440 chr11 104174719 . tc tCACTCTAc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20441 chr11 104175730 . tt tTCACTCGt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20442 chr11 104220837 . G C 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,39:2:0:0/1:32 | |
| 20443 chr11 104229046 . T TCATGACCC 9.94 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 20444 chr11 104243646 . at aTCTCTCTGt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20445 chr11 104253043 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 20446 chr11 104253682 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 20447 chr11 104263272 . gctctctctctct gctctctctct 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 20448 chr11 104267978 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20449 chr11 104275095 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 20450 chr11 104283430 . tt tTGTGt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20451 chr11 104291960 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20452 chr11 104299636 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20453 chr11 104324827 . TTAGTAGT TTAGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20454 chr11 104350947 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20455 chr11 104365690 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20456 chr11 104382443 . g gTGTCGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20457 chr11 104384345 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20458 chr11 104401215 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 20459 chr11 104405636 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 20460 chr11 104440907 . g gGGGCTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20461 chr11 104444437 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20462 chr11 104460219 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20463 chr11 104460231 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20464 chr11 104500852 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20465 chr11 104533072 . T C 14.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 20466 chr11 104556629 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20467 chr11 104557694 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20468 chr11 104567867 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20469 chr11 104569931 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20470 chr11 104573437 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20471 chr11 104574631 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20472 chr11 104575398 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20473 chr11 104594207 . A C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 20474 chr11 104622104 . G A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 20475 chr11 104643907 . C T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 20476 chr11 104651529 . t tCACG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20477 chr11 104655019 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 20478 chr11 104657063 . AAATT A 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20479 chr11 104679914 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20480 chr11 104681162 . G C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 20481 chr11 104687761 . a aGCTCGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20482 chr11 104701348 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20483 chr11 104710189 . ca cACCTCATGa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20484 chr11 104716592 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20485 chr11 104721639 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20486 chr11 104723476 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20487 chr11 104756768 . C A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 20488 chr11 104766334 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20489 chr11 104801336 . agg aGGCgg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20490 chr11 104808972 . A AAC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 20491 chr11 104810510 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20492 chr11 104823044 . T TCC 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 20493 chr11 104831510 . t tCAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20494 chr11 104835026 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20495 chr11 104835033 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20496 chr11 104853996 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 20497 chr11 104863118 . c cAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20498 chr11 104869708 . G C 75 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=2,8,1,5;MQ=48;PV4=1,0.039,2.6e-08,1 PL:DP:SP:GT:GQ 105,0,249:16:0:0/1:99 | |
| 20499 chr11 104871199 . T C 6.98 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 20500 chr11 104877927 . T C 99 . DP=29;AF1=0.5;CI95=0.5,0.5;DP4=7,7,10,4;MQ=48;PV4=0.44,2e-05,5.4e-07,1 PL:DP:SP:GT:GQ 184,0,255:28:4:0/1:99 | |
| 20501 chr11 104879700 . A G 34 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=0,9,2,3;MQ=49;PV4=0.11,2.1e-05,0.0012,0.35 PL:DP:SP:GT:GQ 64,0,204:14:10:0/1:67 | |
| 20502 chr11 104902505 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 20503 chr11 104905900 . T G 4.13 . DP=31;AF1=0.4998;CI95=0.5,0.5;DP4=1,8,0,5;MQ=49;PV4=1,0.27,0.065,1 PL:DP:SP:GT:GQ 32,0,134:14:0:0/1:35 | |
| 20504 chr11 104936828 . G A 18 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=49 PL:DP:SP:GT:GQ 50,9,0:3:0:1/1:63 | |
| 20505 chr11 104936842 . C G 11.1 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=46 PL:DP:SP:GT:GQ 42,6,0:2:0:1/1:49 | |
| 20506 chr11 104936965 . G C 3.54 . DP=5;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,2;MQ=48;PV4=1,0.027,0.11,1 PL:DP:SP:GT:GQ 31,0,41:3:0:0/1:34 | |
| 20507 chr11 104953778 . aga aGAGAAATga 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20508 chr11 104971576 . G T 11.3 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,4;MQ=49;PV4=1,0.0025,0.091,1 PL:DP:SP:GT:GQ 41,0,118:8:0:0/1:44 | |
| 20509 chr11 104972190 . C T 5.46 . DP=20;AF1=0.4999;CI95=0.5,0.5;DP4=1,13,0,4;MQ=49;PV4=1,0.12,5.6e-09,0.36 PL:DP:SP:GT:GQ 34,0,208:18:0:0/1:37 | |
| 20510 chr11 104972456 . A ATCTTTGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20511 chr11 104983575 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20512 chr11 104998543 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20513 chr11 105013935 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 20514 chr11 105026232 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 20515 chr11 105048899 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20516 chr11 105054557 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20517 chr11 105057096 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20518 chr11 105062905 . C G 8.65 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20519 chr11 105086117 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 20520 chr11 105093475 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20521 chr11 105096588 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20522 chr11 105100910 . T C 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 20523 chr11 105103674 . TACAA T 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20524 chr11 105109658 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20525 chr11 105110108 . C G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 20526 chr11 105126050 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 20527 chr11 105131508 . aa aAAGAGa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20528 chr11 105146869 . GA GATCTCCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20529 chr11 105147711 . ATGT AT 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 20530 chr11 105148705 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 20531 chr11 105177517 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20532 chr11 105198495 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20533 chr11 105221023 . catat c 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20534 chr11 105262127 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20535 chr11 105303237 . a aGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20536 chr11 105307829 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20537 chr11 105360332 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20538 chr11 105371068 . gtgt g 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20539 chr11 105386983 . GC GCTTC 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 20540 chr11 105390413 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20541 chr11 105404614 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 20542 chr11 105433576 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 20543 chr11 105447867 . C A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 20544 chr11 105455182 . ca cAGTCGTa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20545 chr11 105484613 . T C 11.1 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=46 PL:DP:SP:GT:GQ 42,6,0:2:0:1/1:49 | |
| 20546 chr11 105520184 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20547 chr11 105525598 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20548 chr11 105534624 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 20549 chr11 105537645 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 20550 chr11 105549925 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 20551 chr11 105556460 . TG TGG 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 20552 chr11 105594098 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20553 chr11 105605095 . tt tTGTTGAGATCCt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20554 chr11 105605748 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 20555 chr11 105611399 . C G 5.46 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20556 chr11 105617737 . cttccctt ct 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 20557 chr11 105624009 . A C 3.54 . DP=12;AF1=0.4998;CI95=0.5,0.5;DP4=0,5,0,2;MQ=48;PV4=1,1,1.4e-05,1 PL:DP:SP:GT:GQ 31,0,72:7:0:0/1:34 | |
| 20558 chr11 105634072 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20559 chr11 105635139 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 20560 chr11 105642552 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 20561 chr11 105673827 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20562 chr11 105719560 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20563 chr11 105721974 . TC TCAC 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20564 chr11 105753122 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20565 chr11 105757443 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20566 chr11 105757700 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 20567 chr11 105776603 . T A 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,35:2:0:0/1:33 | |
| 20568 chr11 105793216 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20569 chr11 105804564 . A G 4.15 . DP=10;AF1=0.5049;CI95=0.5,0.5;DP4=1,0,2,0;MQ=48;PV4=1,0.13,0,1 PL:DP:SP:GT:GQ 32,0,17:3:0:0/1:20 | |
| 20570 chr11 105806646 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 20571 chr11 105844923 . C A 11.1 . DP=10;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 42,6,0:2:0:1/1:49 | |
| 20572 chr11 105873885 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20573 chr11 105905855 . T TAGG 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 20574 chr11 105925683 . T C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 20575 chr11 105927585 . G GCTATCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20576 chr11 105929773 . T G 5.47 . DP=7;AF1=0.5015;CI95=0.5,0.5;DP4=0,2,2,0;MQ=49;PV4=0.33,1,0.019,1 PL:DP:SP:GT:GQ 34,0,22:4:5:0/1:25 | |
| 20577 chr11 105929774 . AC ACGC 39.2 . INDEL;DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=50 PL:DP:SP:GT:GQ 78,6,0:2:0:1/1:49 | |
| 20578 chr11 105929775 . CAT CATAT 12.7 . INDEL;DP=6;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20579 chr11 105932220 . T A 4.14 . DP=3;AF1=0.5018;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,21:2:0:0/1:24 | |
| 20580 chr11 105981212 . G A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 20581 chr11 106011883 . G T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20582 chr11 106050061 . t tAGATTCTG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20583 chr11 106054981 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 20584 chr11 106060648 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 20585 chr11 106073907 . TC TCAC 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 20586 chr11 106076277 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 20587 chr11 106140401 . gt gTGTt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20588 chr11 106141744 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20589 chr11 106163849 . tga tGAga 5.8 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 20590 chr11 106167685 . C A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 20591 chr11 106175290 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20592 chr11 106183714 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20593 chr11 106196277 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20594 chr11 106249305 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 20595 chr11 106270949 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20596 chr11 106274308 . ta tACa 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 20597 chr11 106290136 . ACCC ACCCCC 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=1,1,1,0;MQ=50;PV4=1,1,1,0.29 PL:DP:SP:GT:GQ 41,0,58:3:0:0/1:44 | |
| 20598 chr11 106295872 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=46 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 20599 chr11 106297215 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20600 chr11 106298378 . CT CTTTCCACTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20601 chr11 106310558 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 20602 chr11 106377293 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 20603 chr11 106385917 . G T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 20604 chr11 106440424 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20605 chr11 106476429 . TGA TGACGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20606 chr11 106483707 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20607 chr11 106492449 . C CACCAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20608 chr11 106558181 . GCA GCACCGTTAAACCA 5.08 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,0.33,1,1 PL:DP:SP:GT:GQ 41,0,83:3:0:0/1:44 | |
| 20609 chr11 106562228 . A C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20610 chr11 106581378 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20611 chr11 106611048 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20612 chr11 106618595 . T C 33.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=45 PL:DP:SP:GT:GQ 65,6,0:2:0:1/1:49 | |
| 20613 chr11 106619017 . CAA CAATAAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20614 chr11 106652351 . a aGGTGACT 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=48 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 20615 chr11 106663694 . C G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 20616 chr11 106680771 . T G 42 . DP=31;AF1=0.5;CI95=0.5,0.5;DP4=2,8,8,0;MQ=47;PV4=0.0011,0.003,0.011,1 PL:DP:SP:GT:GQ 72,0,223:18:30:0/1:75 | |
| 20617 chr11 106685301 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20618 chr11 106686513 . C T 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20619 chr11 106689236 . C G 6.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 20620 chr11 106753163 . T TCGAGCGA 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=48 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20621 chr11 106785985 . t tTC 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 20622 chr11 106799900 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 20623 chr11 106800653 . AA AATA 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 20624 chr11 106842660 . c cGCAAAA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20625 chr11 106847427 . T TAGATGGTCTACAAA 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 20626 chr11 106849338 . A G 14.9 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=45 PL:DP:SP:GT:GQ 46,6,0:2:0:1/1:49 | |
| 20627 chr11 106849354 . T C 19.1 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=3,0,0,3;MQ=48;PV4=0.1,0.1,0.004,1 PL:DP:SP:GT:GQ 49,0,88:6:10:0/1:52 | |
| 20628 chr11 106849400 . G A 14.2 . DP=23;AF1=0.5;CI95=0.5,0.5;DP4=3,12,1,5;MQ=49;PV4=1,9.5e-08,0.0002,1 PL:DP:SP:GT:GQ 44,0,255:21:0:0/1:47 | |
| 20629 chr11 106853685 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20630 chr11 106867306 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20631 chr11 106869028 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20632 chr11 106880280 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20633 chr11 106919881 . caa cAACGaa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20634 chr11 106964268 . t tTTATAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20635 chr11 106981429 . t tCTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20636 chr11 107006728 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 20637 chr11 107047132 . A G 3.01 . DP=7;AF1=0.4997;CI95=0.5,0.5;DP4=0,2,0,2;MQ=40;PV4=1,0.0051,0.0025,0.084 PL:DP:SP:GT:GQ 30,0,73:4:0:0/1:33 | |
| 20638 chr11 107081436 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 20639 chr11 107085116 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 20640 chr11 107097734 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20641 chr11 107105630 . cc cCACTCAGc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20642 chr11 107111960 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20643 chr11 107130507 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 20644 chr11 107149449 . G C 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,43:2:0:0/1:33 | |
| 20645 chr11 107173264 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20646 chr11 107184584 . g gCAC 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20647 chr11 107185036 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20648 chr11 107199224 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20649 chr11 107203876 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20650 chr11 107207135 . G C 3.54 . DP=2;AF1=0.5002;CI95=0.5,0.5;DP4=0,1,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,28:2:0:0/1:29 | |
| 20651 chr11 107217615 . tgg t 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 20652 chr11 107221517 . G T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 20653 chr11 107222660 . ct cTt 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20654 chr11 107262608 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 20655 chr11 107268622 . g gTCCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20656 chr11 107275143 . A G 99 . DP=26;AF1=1;CI95=1,1;DP4=0,0,7,15;MQ=49 PL:DP:SP:GT:GQ 194,66,0:22:0:1/1:99 | |
| 20657 chr11 107275287 . GGTG GG 70.4 . INDEL;DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=50 PL:DP:SP:GT:GQ 110,9,0:3:0:1/1:63 | |
| 20658 chr11 107284549 . c cAAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20659 chr11 107287509 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 20660 chr11 107288452 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20661 chr11 107299696 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20662 chr11 107320928 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 20663 chr11 107324397 . tgcgccttag tg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20664 chr11 107342962 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 20665 chr11 107376849 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20666 chr11 107379303 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20667 chr11 107399780 . AA AATCTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20668 chr11 107404003 . G T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20669 chr11 107411604 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20670 chr11 107411833 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20671 chr11 107412776 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 20672 chr11 107424532 . GC GCCC 7.42 . INDEL;DP=7;AF1=0.5101;CI95=0.5,0.5;DP4=1,0,1,0;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,14:2:0:0/1:17 | |
| 20673 chr11 107431689 . T C 34 . DP=6;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,3;MQ=48;PV4=1,0.007,0.016,1 PL:DP:SP:GT:GQ 64,0,110:6:0:0/1:67 | |
| 20674 chr11 107452603 . C G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 20675 chr11 107456561 . A C 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 20676 chr11 107457573 . A C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20677 chr11 107489755 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20678 chr11 107497187 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20679 chr11 107535477 . CAA C 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 20680 chr11 107539786 . AC ACTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20681 chr11 107542106 . G C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 20682 chr11 107552186 . T C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 20683 chr11 107556244 . A C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 20684 chr11 107569604 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20685 chr11 107578721 . C G 84 . DP=24;AF1=1;CI95=1,1;DP4=0,1,0,17;MQ=49;PV4=1,0.16,0.31,1 PL:DP:SP:GT:GQ 117,24,0:18:0:1/1:96 | |
| 20686 chr11 107587391 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20687 chr11 107607312 . T C 14.1 . DP=15;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=50 PL:DP:SP:GT:GQ 46,9,0:3:0:1/1:63 | |
| 20688 chr11 107607409 . G A 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 20689 chr11 107608968 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20690 chr11 107622778 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20691 chr11 107627035 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20692 chr11 107627598 . TA TAA 3.25 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20693 chr11 107640198 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20694 chr11 107661749 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20695 chr11 107671812 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20696 chr11 107673709 . C T 24 . DP=21;AF1=0.5;CI95=0.5,0.5;DP4=13,1,7,0;MQ=50;PV4=1,0.00018,0.0079,1 PL:DP:SP:GT:GQ 54,0,248:21:0:0/1:57 | |
| 20697 chr11 107685001 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20698 chr11 107686718 . C T 90.1 . DP=10;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=46 PL:DP:SP:GT:GQ 123,21,0:7:0:1/1:84 | |
| 20699 chr11 107695285 . AG AGG 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20700 chr11 107695599 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 20701 chr11 107731477 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20702 chr11 107739589 . ca cACACTGATCCAa 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 20703 chr11 107740202 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20704 chr11 107779214 . C CCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20705 chr11 107787795 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 20706 chr11 107789511 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20707 chr11 107800510 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20708 chr11 107806400 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20709 chr11 107808604 . GT GTGGGAT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 20710 chr11 107817110 . G C 8.44 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=37 PL:DP:SP:GT:GQ 39,6,0:2:0:1/1:49 | |
| 20711 chr11 107825612 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 20712 chr11 107827023 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 20713 chr11 107835838 . C G 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20714 chr11 107840455 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20715 chr11 107860623 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20716 chr11 107866078 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20717 chr11 107880152 . T C 16.1 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=0,7,0,4;MQ=48;PV4=1,0.47,0.27,0.18 PL:DP:SP:GT:GQ 46,0,82:11:0:0/1:49 | |
| 20718 chr11 107901647 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 20719 chr11 107907737 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20720 chr11 107915140 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20721 chr11 107917116 . T C 3.54 . DP=12;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,2;MQ=49;PV4=1,0.037,0.33,0.3 PL:DP:SP:GT:GQ 31,0,35:3:0:0/1:33 | |
| 20722 chr11 107925303 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20723 chr11 107927505 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 20724 chr11 107959752 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20725 chr11 107968573 . TTA TTAGTA 5.08 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,1,1,0 PL:DP:SP:GT:GQ 41,0,58:3:0:0/1:44 | |
| 20726 chr11 108004687 . G A 3.01 . DP=19;AF1=0.4997;CI95=0.5,0.5;DP4=1,9,0,5;MQ=50;PV4=1,0.00053,1,1 PL:DP:SP:GT:GQ 30,0,217:15:0:0/1:33 | |
| 20727 chr11 108005941 . C A 9.52 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=1,2,0,3;MQ=47;PV4=1,0.3,0.069,0.18 PL:DP:SP:GT:GQ 39,0,60:6:0:0/1:42 | |
| 20728 chr11 108031564 . GAAAAAAAA GAAA 5.08 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 20729 chr11 108033704 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20730 chr11 108033709 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20731 chr11 108043988 . C T 28.5 . DP=22;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=49 PL:DP:SP:GT:GQ 61,12,0:4:0:1/1:72 | |
| 20732 chr11 108077243 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20733 chr11 108085833 . gg gGGTTGTACTCg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20734 chr11 108087933 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 20735 chr11 108093208 . A T 19.1 . DP=35;AF1=0.5;CI95=0.5,0.5;DP4=11,1,2,3;MQ=49;PV4=0.053,0.00056,0.0054,0.28 PL:DP:SP:GT:GQ 49,0,248:17:13:0/1:52 | |
| 20736 chr11 108101460 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20737 chr11 108105964 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20738 chr11 108117302 . T C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 20739 chr11 108121166 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20740 chr11 108121332 . A C 9.53 . DP=8;AF1=0.5016;CI95=0.5,0.5;DP4=1,0,2,0;MQ=48;PV4=1,0,0,0.37 PL:DP:SP:GT:GQ 39,0,22:3:0:0/1:25 | |
| 20741 chr11 108139106 . CTTAGTGTTA CTTA 99 . INDEL;DP=25;AF1=0.5;CI95=0.5,0.5;DP4=12,0,8,0;MQ=50;PV4=1,7.9e-06,1,1 PL:DP:SP:GT:GQ 188,0,227:20:0:0/1:99 | |
| 20742 chr11 108142204 . C T 7.8 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,3;MQ=48;PV4=1,0.066,1,1 PL:DP:SP:GT:GQ 37,0,60:6:0:0/1:40 | |
| 20743 chr11 108153445 . GAAA GA 12.7 . INDEL;DP=13;AF1=0.5;CI95=0.5,0.5;DP4=3,2,2,0;MQ=50;PV4=1,0.49,1,0.24 PL:DP:SP:GT:GQ 50,0,142:7:0:0/1:53 | |
| 20744 chr11 108153649 . A C 3.01 . DP=6;AF1=0.4998;CI95=0.5,0.5;DP4=0,2,0,2;MQ=48;PV4=1,0.19,0.072,0.35 PL:DP:SP:GT:GQ 30,0,39:4:0:0/1:32 | |
| 20745 chr11 108159704 . G T 19.1 . DP=11;AF1=0.5;CI95=0.5,0.5;DP4=2,3,4,0;MQ=49;PV4=0.17,0.24,0.16,1 PL:DP:SP:GT:GQ 49,0,103:9:8:0/1:52 | |
| 20746 chr11 108183167 . A G 50.5 . DP=19;AF1=0.5718;CI95=0.5,1;DP4=0,1,1,3;MQ=47;PV4=1,1,0.038,1 PL:DP:SP:GT:GQ 80,0,6:5:0:0/1:8 | |
| 20747 chr11 108186956 . T C 3.02 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20748 chr11 108188136 . G A 99 . DP=30;AF1=0.5;CI95=0.5,0.5;DP4=9,3,14,0;MQ=46;PV4=0.085,2.7e-07,2.5e-08,1 PL:DP:SP:GT:GQ 188,0,255:26:11:0/1:99 | |
| 20749 chr11 108190770 . G C 79 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=0,9,2,5;MQ=48;PV4=0.17,3e-06,0.024,0.15 PL:DP:SP:GT:GQ 109,0,204:16:8:0/1:99 | |
| 20750 chr11 108191421 . tc tCc 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20751 chr11 108196712 . CATTATTATTATTATT CATTATTATTATT 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20752 chr11 108199995 . A G 12 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=46 PL:DP:SP:GT:GQ 43,6,0:2:0:1/1:49 | |
| 20753 chr11 108200846 . CAACTT C 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,0.058,1,1 PL:DP:SP:GT:GQ 41,0,83:3:0:0/1:44 | |
| 20754 chr11 108204888 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20755 chr11 108217630 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20756 chr11 108221498 . T C 14.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47 PL:DP:SP:GT:GQ 46,6,0:2:0:1/1:49 | |
| 20757 chr11 108225483 . C T 34 . DP=6;AF1=0.5;CI95=0.5,0.5;DP4=2,0,3,0;MQ=48;PV4=1,0.0094,0.11,0.47 PL:DP:SP:GT:GQ 64,0,77:5:0:0/1:67 | |
| 20758 chr11 108225661 . A G 99 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=40 PL:DP:SP:GT:GQ 141,15,0:5:0:1/1:75 | |
| 20759 chr11 108227253 . G T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20760 chr11 108277901 . TA TTGA,TAACAA 6.1 . INDEL;DP=6;AF1=0.5554;CI95=0.5,1;DP4=0,1,0,2;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 77,35,35,42,0,42:3:0:0/1:10 | |
| 20761 chr11 108307346 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20762 chr11 108307352 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20763 chr11 108322536 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20764 chr11 108332876 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 20765 chr11 108338797 . G T 10.4 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 20766 chr11 108345515 . G GA 99 . INDEL;DP=27;AF1=0.5;CI95=0.5,0.5;DP4=12,2,9,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 180,0,204:24:0:0/1:99 | |
| 20767 chr11 108349376 . G A 6.98 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,44:2:0:0/1:38 | |
| 20768 chr11 108351448 . C CTCTGTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20769 chr11 108352160 . C T 55 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=45 PL:DP:SP:GT:GQ 87,9,0:3:0:1/1:63 | |
| 20770 chr11 108380335 . T C 99 . DP=48;AF1=1;CI95=1,1;DP4=1,1,2,20;MQ=48;PV4=0.24,1,0.073,1 PL:DP:SP:GT:GQ 148,31,0:24:6:1/1:99 | |
| 20771 chr11 108382207 . T C 29 . DP=11;AF1=0.5;CI95=0.5,0.5;DP4=5,2,2,2;MQ=49;PV4=0.58,6.5e-07,0.0086,1 PL:DP:SP:GT:GQ 59,0,240:11:2:0/1:62 | |
| 20772 chr11 108385893 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20773 chr11 108395377 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 20774 chr11 108440005 . ct cTAACGt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20775 chr11 108469021 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20776 chr11 108502488 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20777 chr11 108522435 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20778 chr11 108525384 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20779 chr11 108531669 . C G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 20780 chr11 108548002 . T A 19.1 . DP=32;AF1=0.5;CI95=0.5,0.5;DP4=0,14,0,6;MQ=49;PV4=1,0.13,0.0081,0.38 PL:DP:SP:GT:GQ 49,0,149:20:0:0/1:52 | |
| 20781 chr11 108559712 . A C 8.64 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=0,3,3,0;MQ=46;PV4=0.1,0.14,0.11,1 PL:DP:SP:GT:GQ 38,0,56:6:10:0/1:41 | |
| 20782 chr11 108562488 . g gAAT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 20783 chr11 108570539 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20784 chr11 108573358 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 20785 chr11 108604741 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20786 chr11 108612702 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20787 chr11 108622795 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20788 chr11 108631823 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20789 chr11 108634236 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20790 chr11 108639274 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20791 chr11 108647040 . G T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 20792 chr11 108659521 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20793 chr11 108683162 . TGA TGAGCTAGAGAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20794 chr11 108693228 . T TTGA 3.25 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,3,1,0;MQ=39;PV4=0.25,0.21,1,0.025 PL:DP:SP:GT:GQ 38,0,72:4:0:0/1:41 | |
| 20795 chr11 108704985 . ac aCTc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20796 chr11 108709378 . ATA ATATGCGAGTA 3.84 . INDEL;DP=14;AF1=0.508;CI95=0.5,0.5;DP4=0,2,0,1;MQ=49;PV4=1,1,0.17,1 PL:DP:SP:GT:GQ 39,0,15:3:0:0/1:18 | |
| 20797 chr11 108711979 . A G 10.2 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 41,6,0:2:0:1/1:49 | |
| 20798 chr11 108721437 . C T 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,43:2:0:0/1:33 | |
| 20799 chr11 108734447 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20800 chr11 108755169 . G A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 20801 chr11 108773762 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20802 chr11 108813447 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20803 chr11 108823349 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20804 chr11 108870391 . A C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 20805 chr11 108876418 . tttgat tt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20806 chr11 108884508 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20807 chr11 108889856 . gtcttatctta gtctta 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20808 chr11 108891331 . G T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 20809 chr11 108891603 . A T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 20810 chr11 108891954 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20811 chr11 108909418 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 20812 chr11 108917373 . G C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 20813 chr11 108929897 . t tCCGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20814 chr11 108938621 . tg tGCg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20815 chr11 108942171 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20816 chr11 108947121 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20817 chr11 108963060 . G GTCGCAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20818 chr11 109000395 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 20819 chr11 109030881 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 20820 chr11 109035187 . AGTTGTTGTTGTT AGTTGTTGTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20821 chr11 109071607 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20822 chr11 109073154 . G GACCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20823 chr11 109083156 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20824 chr11 109112743 . T C 7.89 . DP=2;AF1=0.5128;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,13:2:0:0/1:16 | |
| 20825 chr11 109123817 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20826 chr11 109140512 . T G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20827 chr11 109157487 . a aGAGGCTGTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20828 chr11 109161494 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20829 chr11 109162183 . C A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 20830 chr11 109162661 . t tGGCGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20831 chr11 109177989 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 20832 chr11 109211221 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20833 chr11 109225413 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20834 chr11 109240684 . ag aGACGGGg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20835 chr11 109240856 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20836 chr11 109271920 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20837 chr11 109294426 . G A 6.98 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,43:2:0:0/1:38 | |
| 20838 chr11 109294510 . G T 11.1 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 42,6,0:2:0:1/1:49 | |
| 20839 chr11 109296218 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 20840 chr11 109310060 . aatg a 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 20841 chr11 109354041 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20842 chr11 109355360 . A C 8.65 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20843 chr11 109357059 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20844 chr11 109434144 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20845 chr11 109440135 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20846 chr11 109464635 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 20847 chr11 109486588 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20848 chr11 109520274 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20849 chr11 109527217 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20850 chr11 109550853 . AGTG AG 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 20851 chr11 109587026 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20852 chr11 109656359 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20853 chr11 109658275 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20854 chr11 109660694 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20855 chr11 109666687 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 20856 chr11 109667418 . G A 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 20857 chr11 109669283 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 20858 chr11 109683512 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20859 chr11 109692088 . ttaaaa t 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 20860 chr11 109718716 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 20861 chr11 109775474 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 20862 chr11 109796343 . A C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 20863 chr11 109797878 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20864 chr11 109799358 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20865 chr11 109817840 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20866 chr11 109835732 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 20867 chr11 109840149 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20868 chr11 109848946 . G GAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20869 chr11 109856193 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20870 chr11 109873095 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20871 chr11 109882650 . G C 12.3 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 20872 chr11 109902080 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20873 chr11 109920383 . C T 24 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=47 PL:DP:SP:GT:GQ 56,9,0:3:0:1/1:63 | |
| 20874 chr11 109934097 . ttgct tt 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 20875 chr11 109937195 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 20876 chr11 109951077 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 20877 chr11 109959376 . G T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 20878 chr11 109961027 . A C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 20879 chr11 109982235 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 20880 chr11 109984080 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20881 chr11 110014787 . GT GTT 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 20882 chr11 110029369 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20883 chr11 110055626 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20884 chr11 110056184 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 20885 chr11 110099404 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20886 chr11 110102794 . ttct tTCTAACtct 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20887 chr11 110103924 . A C 33 . DP=41;AF1=0.5;CI95=0.5,0.5;DP4=13,5,20,0;MQ=50;PV4=0.017,3.5e-06,0.069,1 PL:DP:SP:GT:GQ 63,0,255:38:18:0/1:66 | |
| 20888 chr11 110106746 . C T 17.6 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=50 PL:DP:SP:GT:GQ 50,12,0:4:0:1/1:72 | |
| 20889 chr11 110128994 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 20890 chr11 110191278 . tcc t 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 20891 chr11 110193113 . cac cACGTAGGTTTTac 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20892 chr11 110201424 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 20893 chr11 110216672 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 20894 chr11 110231572 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20895 chr11 110274670 . ca cACCTAa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20896 chr11 110277003 . tgga t 10.8 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 20897 chr11 110315324 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 20898 chr11 110318742 . ACT ACTGTTCT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 20899 chr11 110333123 . T C 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,42:2:0:0/1:35 | |
| 20900 chr11 110359706 . t tTCTTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20901 chr11 110367771 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20902 chr11 110377860 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20903 chr11 110379712 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20904 chr11 110394318 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20905 chr11 110396973 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 20906 chr11 110440755 . a aAT 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 20907 chr11 110441520 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 20908 chr11 110444836 . T TGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20909 chr11 110463651 . A AGACTCAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20910 chr11 110477212 . C A 26 . DP=6;AF1=0.5;CI95=0.5,0.5;DP4=3,0,3,0;MQ=48;PV4=1,0.073,0.078,1 PL:DP:SP:GT:GQ 56,0,96:6:0:0/1:59 | |
| 20911 chr11 110507225 . CG CGCTCTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20912 chr11 110532016 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20913 chr11 110536421 . G C 6.2 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=48;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,44:2:0:0/1:37 | |
| 20914 chr11 110542961 . aaa aAAGaa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20915 chr11 110548915 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 20916 chr11 110576736 . T TCTGACACC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20917 chr11 110578212 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20918 chr11 110579659 . cac cACTac 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20919 chr11 110600417 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 20920 chr11 110623075 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 20921 chr11 110633968 . G T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 20922 chr11 110636316 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20923 chr11 110638769 . T C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 20924 chr11 110639465 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 20925 chr11 110649478 . tta tTAta 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20926 chr11 110651660 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20927 chr11 110662537 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20928 chr11 110692177 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20929 chr11 110703174 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20930 chr11 110707657 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20931 chr11 110731469 . TT TTGT 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 20932 chr11 110747311 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 20933 chr11 110775242 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 20934 chr11 110788646 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20935 chr11 110811295 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20936 chr11 110811310 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20937 chr11 110816360 . AAGG A 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20938 chr11 110841569 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20939 chr11 110863920 . tt tTCGt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20940 chr11 110884389 . C T 6.2 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,44:2:0:0/1:37 | |
| 20941 chr11 110886011 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20942 chr11 110890448 . C CCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20943 chr11 110901570 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20944 chr11 110905337 . G C 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20945 chr11 110942321 . g gT 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 20946 chr11 110964541 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 20947 chr11 110968657 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20948 chr11 110990935 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 20949 chr11 111031907 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20950 chr11 111040574 . G C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 20951 chr11 111048054 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20952 chr11 111054749 . c cTCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20953 chr11 111083665 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 20954 chr11 111084418 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 20955 chr11 111084987 . t tGTCTGCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20956 chr11 111093742 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 20957 chr11 111100565 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 20958 chr11 111119174 . TG TGCCAAGAGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20959 chr11 111125837 . C T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 20960 chr11 111129301 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20961 chr11 111138765 . AAAGAAGAAGAAG AAAGAAGAAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20962 chr11 111145283 . g gAGATTTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20963 chr11 111149081 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20964 chr11 111150979 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20965 chr11 111166045 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20966 chr11 111176050 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20967 chr11 111185013 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20968 chr11 111196670 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20969 chr11 111209160 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 20970 chr11 111228644 . CAG C 32.5 . INDEL;DP=5;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,2;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 70,0,54:4:0:0/1:57 | |
| 20971 chr11 111237883 . A G 24 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,1;MQ=50 PL:DP:SP:GT:GQ 56,9,0:3:0:1/1:63 | |
| 20972 chr11 111284530 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20973 chr11 111303723 . A AGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20974 chr11 111318349 . G T 4.77 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 20975 chr11 111328923 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20976 chr11 111338478 . T C 13 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 44,6,0:2:0:1/1:49 | |
| 20977 chr11 111340171 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20978 chr11 111355860 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20979 chr11 111355884 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20980 chr11 111368047 . G T 3.98 . DP=53;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 33,6,0:2:0:1/1:49 | |
| 20981 chr11 111378396 . TG TGTCTCAAG 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=49 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 20982 chr11 111383789 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 20983 chr11 111384862 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20984 chr11 111385160 . C CG 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 20985 chr11 111413332 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20986 chr11 111419470 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20987 chr11 111420364 . A G 99 . DP=44;AF1=1;CI95=1,1;DP4=0,1,10,28;MQ=44;PV4=1,1,0.00017,1 PL:DP:SP:GT:GQ 255,85,0:39:0:1/1:99 | |
| 20988 chr11 111421174 . G GGGCAAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 20989 chr11 111424641 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20990 chr11 111434368 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 20991 chr11 111443500 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20992 chr11 111451165 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20993 chr11 111455912 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 20994 chr11 111456821 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20995 chr11 111456847 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 20996 chr11 111465150 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 20997 chr11 111469726 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 20998 chr11 111477567 . A C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 20999 chr11 111479487 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 21000 chr11 111486892 . T G 3.01 . DP=6;AF1=0.4997;CI95=0.5,0.5;DP4=2,0,2,0;MQ=49;PV4=1,0.0026,0.048,1 PL:DP:SP:GT:GQ 30,0,80:4:0:0/1:33 | |
| 21001 chr11 111487106 . C G 99 . DP=22;AF1=1;CI95=1,1;DP4=0,0,1,17;MQ=47 PL:DP:SP:GT:GQ 190,54,0:18:0:1/1:99 | |
| 21002 chr11 111514274 . c cT 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 21003 chr11 111528441 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 21004 chr11 111533225 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21005 chr11 111535920 . GA GATA 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 21006 chr11 111555386 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 21007 chr11 111561324 . t tGTGTCACAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21008 chr11 111564677 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 21009 chr11 111572469 . T TGATA 7.35 . INDEL;DP=2;AF1=0.5001;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,36:2:0:0/1:38 | |
| 21010 chr11 111576741 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 21011 chr11 111584307 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21012 chr11 111607456 . C T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 21013 chr11 111608866 . T TA 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 21014 chr11 111615897 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 21015 chr11 111618205 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 21016 chr11 111623197 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 21017 chr11 111641086 . AG AGACG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21018 chr11 111650086 . TT TTCT 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 21019 chr11 111663213 . T C 6.98 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,44:2:0:0/1:38 | |
| 21020 chr11 111684826 . c cTAAAAGAACGA 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 21021 chr11 111684829 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21022 chr11 111699461 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 21023 chr11 111735800 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21024 chr11 111773851 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 21025 chr11 111781312 . T C 6.79 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 37,6,0:2:0:1/1:49 | |
| 21026 chr11 111784684 . ACC ACTCC 12.7 . INDEL;DP=6;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21027 chr11 111793674 . A AATTGGTTTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21028 chr11 111794173 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 21029 chr11 111809843 . C CTTAGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21030 chr11 111811966 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21031 chr11 111859922 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 21032 chr11 111862260 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 21033 chr11 111876414 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21034 chr11 111891803 . TT TTGGT 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 21035 chr11 111916001 . AGG AG 99 . INDEL;DP=14;AF1=1;CI95=1,1;DP4=0,0,0,13;MQ=50 PL:DP:SP:GT:GQ 157,39,0:13:0:1/1:99 | |
| 21036 chr11 111940848 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21037 chr11 111941077 . ATT ATTTT 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,1,1,0.12 PL:DP:SP:GT:GQ 41,0,79:3:0:0/1:44 | |
| 21038 chr11 111941674 . A G 5.29 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 35,6,0:2:0:1/1:49 | |
| 21039 chr11 111945006 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21040 chr11 111959715 . C T 4.13 . DP=12;AF1=0.4999;CI95=0.5,0.5;DP4=2,0,0,3;MQ=47;PV4=0.1,0.23,1,0.22 PL:DP:SP:GT:GQ 32,0,34:5:10:0/1:33 | |
| 21041 chr11 111960377 . ta tAa 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 21042 chr11 111961927 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 21043 chr11 111963326 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 21044 chr11 112022553 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21045 chr11 112040136 . T C 7.8 . DP=11;AF1=0.5;CI95=0.5,0.5;DP4=0,7,0,4;MQ=50;PV4=1,0.00013,0.1,1 PL:DP:SP:GT:GQ 37,0,182:11:0:0/1:40 | |
| 21046 chr11 112041128 . TTTTGTCCTGTT TTT 99 . INDEL;DP=10;AF1=0.5;CI95=0.5,0.5;DP4=3,0,6,0;MQ=50;PV4=1,0.15,1,1 PL:DP:SP:GT:GQ 176,0,102:9:0:0/1:99 | |
| 21047 chr11 112041842 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 21048 chr11 112049351 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 21049 chr11 112064431 . T C 99 . DP=7;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=43 PL:DP:SP:GT:GQ 175,21,0:7:0:1/1:84 | |
| 21050 chr11 112065367 . A C 5.31 . DP=12;AF1=0.6242;CI95=0.5,1;DP4=1,0,2,0;MQ=49;PV4=1,1,0.17,0.23 PL:DP:SP:GT:GQ 33,0,4:3:0:0/1:6 | |
| 21051 chr11 112072316 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 21052 chr11 112087088 . A T 6.22 . DP=9;AF1=0.5039;CI95=0.5,0.5;DP4=0,1,0,4;MQ=49;PV4=1,0.041,0.25,1 PL:DP:SP:GT:GQ 35,0,18:5:0:0/1:21 | |
| 21053 chr11 112087124 . C T 17.6 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=50 PL:DP:SP:GT:GQ 50,12,0:4:0:1/1:72 | |
| 21054 chr11 112088499 . A C 45.1 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,6,0;MQ=49 PL:DP:SP:GT:GQ 78,18,0:6:0:1/1:90 | |
| 21055 chr11 112088766 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 21056 chr11 112091450 . CT CTAGTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21057 chr11 112096428 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 21058 chr11 112100583 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 21059 chr11 112104245 . T C 43 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,1,2;MQ=44 PL:DP:SP:GT:GQ 75,9,0:3:0:1/1:63 | |
| 21060 chr11 112124038 . GACCT GACCTACCT 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21061 chr11 112124715 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 21062 chr11 112125125 . ct cTTGAt 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 21063 chr11 112125385 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 21064 chr11 112146394 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 21065 chr11 112152611 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21066 chr11 112156441 . C CAATGTTTCTCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21067 chr11 112157818 . C CTCTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21068 chr11 112209468 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 21069 chr11 112224428 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21070 chr11 112226439 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21071 chr11 112229463 . AAT A 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 21072 chr11 112250461 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21073 chr11 112271809 . T G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 21074 chr11 112272447 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21075 chr11 112314514 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 21076 chr11 112315788 . ag aGACAAAGg 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=49 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 21077 chr11 112322038 . gt gTAt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21078 chr11 112325420 . cc cCTTCGCGc 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 21079 chr11 112327257 . GA GACA 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 21080 chr11 112337717 . T TAA 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 21081 chr11 112347497 . CTTTAATTTCTT CT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21082 chr11 112370070 . T A 13.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 21083 chr11 112374285 . tcctgcc tc 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 21084 chr11 112374757 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21085 chr11 112378775 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21086 chr11 112384470 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21087 chr11 112406106 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 21088 chr11 112423474 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 21089 chr11 112426605 . G A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 21090 chr11 112444548 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 21091 chr11 112455738 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21092 chr11 112459453 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 21093 chr11 112461125 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21094 chr11 112481686 . CT CTCTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21095 chr11 112497880 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 21096 chr11 112499395 . C G 5.29 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 35,6,0:2:0:1/1:49 | |
| 21097 chr11 112501551 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 21098 chr11 112507586 . T A 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 21099 chr11 112522463 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21100 chr11 112523436 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 21101 chr11 112527634 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21102 chr11 112531357 . G A 6.98 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 21103 chr11 112531852 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21104 chr11 112562018 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21105 chr11 112571499 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21106 chr11 112590112 . AA AAACA 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 21107 chr11 112598336 . C A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 21108 chr11 112602846 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 21109 chr11 112605231 . G T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 21110 chr11 112622425 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21111 chr11 112632568 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21112 chr11 112644922 . G A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 21113 chr11 112645323 . A C 4.13 . DP=3;AF1=0.4998;CI95=0.5,0.5;DP4=0,2,1,0;MQ=46;PV4=0.33,0.33,0.17,1 PL:DP:SP:GT:GQ 32,0,75:3:0:0/1:35 | |
| 21114 chr11 112649353 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21115 chr11 112662125 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21116 chr11 112670654 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21117 chr11 112682644 . G T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 21118 chr11 112699365 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 21119 chr11 112709602 . CT CTCCTTT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 21120 chr11 112713042 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 21121 chr11 112713986 . C A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 21122 chr11 112729622 . C G 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,39:2:0:0/1:32 | |
| 21123 chr11 112732142 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 21124 chr11 112737667 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 21125 chr11 112738508 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 21126 chr11 112750746 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 21127 chr11 112757028 . GTGCA G 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21128 chr11 112797813 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 21129 chr11 112849308 . CTT CTTGGTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21130 chr11 112849637 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21131 chr11 112855192 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21132 chr11 112860424 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 21133 chr11 112871350 . G T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 21134 chr11 112876114 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21135 chr11 112909745 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 21136 chr11 112932175 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 21137 chr11 112940464 . A T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 21138 chr11 112956215 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21139 chr11 113021549 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21140 chr11 113041717 . T A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 21141 chr11 113048537 . TGGG TG 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 21142 chr11 113052153 . A G 4.21 . DP=2;AF1=0.5161;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,12:2:0:0/1:15 | |
| 21143 chr11 113077467 . T G 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21144 chr11 113106669 . AGC A 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 21145 chr11 113107850 . A G 6.02 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=45 PL:DP:SP:GT:GQ 36,6,0:2:0:1/1:49 | |
| 21146 chr11 113107860 . C G 7.8 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 21147 chr11 113127023 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 21148 chr11 113130297 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21149 chr11 113137541 . AC ACCTC 12.7 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21150 chr11 113142986 . T A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 21151 chr11 113148156 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 21152 chr11 113156585 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21153 chr11 113158442 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21154 chr11 113164348 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 21155 chr11 113166051 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 21156 chr11 113204971 . C T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 21157 chr11 113205993 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 21158 chr11 113212908 . C CACAACT 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21159 chr11 113220914 . C G 3.34 . DP=5;AF1=0.5937;CI95=0.5,1;DP4=0,1,0,2;MQ=49;PV4=1,1,0.33,0.089 PL:DP:SP:GT:GQ 30,0,5:3:0:0/1:7 | |
| 21160 chr11 113221248 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 21161 chr11 113221388 . G T 10.2 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=48 PL:DP:SP:GT:GQ 41,6,0:2:0:1/1:49 | |
| 21162 chr11 113236040 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 21163 chr11 113240578 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 21164 chr11 113241541 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 21165 chr11 113245568 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21166 chr11 113264357 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 21167 chr11 113271661 . G T 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,38:2:0:0/1:34 | |
| 21168 chr11 113274593 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 21169 chr11 113275981 . C A 12.3 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 21170 chr11 113280177 . G C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 21171 chr11 113287456 . CAG C 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 21172 chr11 113289914 . GAGTC G 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21173 chr11 113294396 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21174 chr11 113296004 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21175 chr11 113329133 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 21176 chr11 113341772 . C CTGGGTCGG 11.8 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=49 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 21177 chr11 113347232 . C T 3.69 . DP=3;AF1=0.5334;CI95=0.5,1;DP4=1,0,0,2;MQ=48;PV4=0.33,1,0.28,1 PL:DP:SP:GT:GQ 31,0,9:3:0:0/1:12 | |
| 21178 chr11 113348717 . G A 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 21179 chr11 113348912 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21180 chr11 113367567 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 21181 chr11 113376055 . C CGAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21182 chr11 113380838 . AAT A 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 21183 chr11 113385402 . T A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 21184 chr11 113386347 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21185 chr11 113387116 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21186 chr11 113391748 . TAAAAAA TAAAAA 9.01 . INDEL;DP=3;AF1=1;CI95=0.5,1;DP4=0,0,1,2;MQ=50 PL:DP:SP:GT:GQ 48,9,0:3:0:1/1:63 | |
| 21187 chr11 113416524 . G C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 21188 chr11 113424100 . C T 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 21189 chr11 113443258 . gt gTAt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21190 chr11 113449737 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21191 chr11 113500011 . C CACCACTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21192 chr11 113505351 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21193 chr11 113545030 . TGGC T 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 21194 chr11 113550882 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 21195 chr11 113558883 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21196 chr11 113563165 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 21197 chr11 113565395 . GA GACA 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 21198 chr11 113570088 . c cTCACAG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21199 chr11 113577375 . A G 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 21200 chr11 113594004 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 21201 chr11 113618968 . G C 64.8 . DP=32;AF1=1;CI95=0.5,1;DP4=1,0,3,3;MQ=49;PV4=1,1,0.22,0.18 PL:DP:SP:GT:GQ 96,6,0:7:0:1/1:49 | |
| 21202 chr11 113619923 . C A 6.79 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 37,6,0:2:0:1/1:49 | |
| 21203 chr11 113628650 . gt gTCt 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21204 chr11 113639021 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 21205 chr11 113641090 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 21206 chr11 113650809 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 21207 chr11 113652306 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21208 chr11 113660514 . A C 11.5 . DP=3;AF1=0.5263;CI95=0.5,1;DP4=1,0,1,1;MQ=47;PV4=1,1,0.29,1 PL:DP:SP:GT:GQ 41,0,10:3:0:0/1:13 | |
| 21209 chr11 113670052 . T A 97.1 . DP=56;AF1=1;CI95=0.5,1;DP4=1,0,7,3;MQ=48;PV4=1,1,0.3,1 PL:DP:SP:GT:GQ 130,18,0:11:0:1/1:90 | |
| 21210 chr11 113679119 . C T 99 . DP=37;AF1=0.5;CI95=0.5,0.5;DP4=6,12,7,7;MQ=47;PV4=0.47,0.00019,9.1e-13,1 PL:DP:SP:GT:GQ 255,0,255:32:3:0/1:99 | |
| 21211 chr11 113683249 . C A 23 . DP=21;AF1=0.5;CI95=0.5,0.5;DP4=1,5,0,7;MQ=49;PV4=0.46,0.04,0.066,1 PL:DP:SP:GT:GQ 53,0,117:13:0:0/1:56 | |
| 21212 chr11 113697926 . GGA GGAGTGA 5.09 . INDEL;DP=6;AF1=0.502;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,21:2:0:0/1:24 | |
| 21213 chr11 113698128 . GG GGGTGTGTG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21214 chr11 113702692 . G C 3.54 . DP=15;AF1=0.4998;CI95=0.5,0.5;DP4=0,6,3,0;MQ=49;PV4=0.012,0.13,0.22,1 PL:DP:SP:GT:GQ 31,0,123:9:19:0/1:34 | |
| 21215 chr11 113708622 . CC CCTATAAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21216 chr11 113718877 . T A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 21217 chr11 113718934 . T C 32.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=43 PL:DP:SP:GT:GQ 64,6,0:2:0:1/1:49 | |
| 21218 chr11 113744487 . CAATA CAATAATA 61.2 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=50 PL:DP:SP:GT:GQ 100,6,0:2:0:1/1:49 | |
| 21219 chr11 113747864 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21220 chr11 113756738 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 21221 chr11 113760891 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 21222 chr11 113772536 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 21223 chr11 113779146 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 21224 chr11 113792241 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21225 chr11 113802601 . A G 3.04 . DP=38;AF1=0.5061;CI95=0.5,0.5;DP4=0,1,0,2;MQ=49;PV4=1,0.36,0.33,1 PL:DP:SP:GT:GQ 30,0,16:3:0:0/1:19 | |
| 21226 chr11 113814795 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 21227 chr11 113821271 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 21228 chr11 113848881 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21229 chr11 113848883 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21230 chr11 113857165 . CT CTCATT 3.81 . INDEL;DP=5;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 21231 chr11 113857249 . C A 18.1 . DP=30;AF1=0.5;CI95=0.5,0.5;DP4=5,6,5,0;MQ=49;PV4=0.093,0.2,0.013,1 PL:DP:SP:GT:GQ 48,0,182:16:10:0/1:51 | |
| 21232 chr11 113895784 . G A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 21233 chr11 113898732 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21234 chr11 113908000 . A T 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 21235 chr11 113946684 . A G 10.4 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 21236 chr11 113954217 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21237 chr11 113954811 . T TG 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 21238 chr11 113970741 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21239 chr11 113981437 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 21240 chr11 113993910 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 21241 chr11 114018541 . G GAAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21242 chr11 114040325 . T C 28.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=46 PL:DP:SP:GT:GQ 60,6,0:2:0:1/1:49 | |
| 21243 chr11 114042629 . G GGAC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 21244 chr11 114053799 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21245 chr11 114056721 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 21246 chr11 114057792 . T G 20 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=0,6,0,4;MQ=49;PV4=1,0.076,0.0026,0.28 PL:DP:SP:GT:GQ 50,0,102:10:0:0/1:53 | |
| 21247 chr11 114062669 . C A 28.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=45 PL:DP:SP:GT:GQ 60,6,0:2:0:1/1:49 | |
| 21248 chr11 114063362 . G T 25.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=46 PL:DP:SP:GT:GQ 57,6,0:2:0:1/1:49 | |
| 21249 chr11 114069575 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21250 chr11 114074899 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 21251 chr11 114078257 . A G 3.54 . DP=3;AF1=0.4998;CI95=0.5,0.5;DP4=2,0,0,1;MQ=48;PV4=0.33,0.14,0,0.42 PL:DP:SP:GT:GQ 31,0,83:3:0:0/1:34 | |
| 21252 chr11 114086403 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21253 chr11 114093372 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 21254 chr11 114113094 . T A 19.1 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=1,9,0,6;MQ=50;PV4=1,1.4e-05,0.13,0.21 PL:DP:SP:GT:GQ 49,0,231:16:0:0/1:52 | |
| 21255 chr11 114113973 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21256 chr11 114115825 . CCTT C 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 21257 chr11 114121337 . T C 37 . DP=5;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,2;MQ=47;PV4=1,0.015,0,1 PL:DP:SP:GT:GQ 67,0,80:4:0:0/1:70 | |
| 21258 chr11 114139205 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 21259 chr11 114168993 . C T 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 21260 chr11 114178461 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 21261 chr11 114179828 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 21262 chr11 114240181 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21263 chr11 114242699 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21264 chr11 114244519 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21265 chr11 114261888 . C A 5.46 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,38:2:0:0/1:36 | |
| 21266 chr11 114272574 . T A 10.4 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=1,7,0,4;MQ=50;PV4=1,0.068,0.021,0.13 PL:DP:SP:GT:GQ 40,0,147:12:0:0/1:43 | |
| 21267 chr11 114273481 . A T 5.46 . DP=8;AF1=0.4999;CI95=0.5,0.5;DP4=3,0,2,0;MQ=48;PV4=1,0.29,0.18,1 PL:DP:SP:GT:GQ 34,0,62:5:0:0/1:37 | |
| 21268 chr11 114275847 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21269 chr11 114276500 . AAAT A 3.25 . INDEL;DP=9;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,40:3:0:0/1:39 | |
| 21270 chr11 114276505 . T C 7.83 . DP=10;AF1=0.505;CI95=0.5,0.5;DP4=0,2,0,4;MQ=47;PV4=1,1,0.13,1 PL:DP:SP:GT:GQ 37,0,17:6:0:0/1:20 | |
| 21271 chr11 114278411 . A ATG 4.42 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=1,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 40,0,81:3:0:0/1:43 | |
| 21272 chr11 114311191 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21273 chr11 114311537 . t tCCTCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21274 chr11 114313669 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 21275 chr11 114320486 . GTTTTTT GTTT 12.7 . INDEL;DP=11;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21276 chr11 114324026 . A G 98.5 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=43 PL:DP:SP:GT:GQ 131,12,0:4:0:1/1:72 | |
| 21277 chr11 114324444 . G A 21 . DP=10;AF1=0.5;CI95=0.5,0.5;DP4=1,2,3,2;MQ=50;PV4=1,0.0077,0.24,1 PL:DP:SP:GT:GQ 51,0,53:8:0:0/1:52 | |
| 21278 chr11 114326629 . G T 7.8 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 21279 chr11 114349693 . CATGA C 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21280 chr11 114387956 . G A 8.44 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=48 PL:DP:SP:GT:GQ 39,6,0:2:0:1/1:49 | |
| 21281 chr11 114393091 . C A 26 . DP=38;AF1=0.5;CI95=0.5,0.5;DP4=4,19,4,4;MQ=50;PV4=0.15,5.2e-07,0.0009,0.36 PL:DP:SP:GT:GQ 56,0,255:31:8:0/1:59 | |
| 21282 chr11 114397754 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21283 chr11 114401577 . T C 24 . DP=17;AF1=1;CI95=0.5,1;DP4=0,0,1,2;MQ=48 PL:DP:SP:GT:GQ 56,9,0:3:0:1/1:63 | |
| 21284 chr11 114420535 . atttatct at 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21285 chr11 114422273 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 21286 chr11 114423967 . A C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 21287 chr11 114425074 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 21288 chr11 114432508 . TT TTGAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21289 chr11 114442103 . A G 99 . DP=28;AF1=1;CI95=1,1;DP4=0,0,6,19;MQ=47 PL:DP:SP:GT:GQ 255,75,0:25:0:1/1:99 | |
| 21290 chr11 114453113 . A T 3.01 . DP=25;AF1=0.4997;CI95=0.5,0.5;DP4=7,1,2,1;MQ=48;PV4=0.49,0.22,0.032,0.1 PL:DP:SP:GT:GQ 30,0,137:11:3:0/1:33 | |
| 21291 chr11 114475823 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 21292 chr11 114478363 . C T 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 21293 chr11 114482791 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21294 chr11 114512406 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 21295 chr11 114538508 . agatgatga aGATgatgatga 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21296 chr11 114569312 . T C 88 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=10,1,6,2;MQ=48;PV4=0.55,0.0016,1.1e-06,0.48 PL:DP:SP:GT:GQ 118,0,229:19:3:0/1:99 | |
| 21297 chr11 114582202 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21298 chr11 114584700 . T C 34.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=42 PL:DP:SP:GT:GQ 66,6,0:2:0:1/1:49 | |
| 21299 chr11 114602749 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21300 chr11 114617883 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 21301 chr11 114645410 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21302 chr11 114649906 . TTC TTCAGGAGTCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21303 chr11 114654278 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21304 chr11 114654598 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 21305 chr11 114662275 . T A 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21306 chr11 114668094 . ACCCC ACC 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 21307 chr11 114682354 . C CGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21308 chr11 114684686 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21309 chr11 114685014 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 21310 chr11 114690451 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21311 chr11 114700891 . C A 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 21312 chr11 114702470 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 21313 chr11 114724740 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21314 chr11 114740728 . T G 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 21315 chr11 114746574 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 21316 chr11 114752613 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 21317 chr11 114758494 . CAG CAGTAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21318 chr11 114760058 . AGGGAATGGGAATGG AGGGAATGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21319 chr11 114787344 . CAC CACGACCTTAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21320 chr11 114788496 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21321 chr11 114796655 . tggagg tgg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21322 chr11 114822720 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 21323 chr11 114825058 . G T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 21324 chr11 114826287 . T TAACTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21325 chr11 114834617 . G GA 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 21326 chr11 114834826 . c cG 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 21327 chr11 114837041 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 21328 chr11 114842563 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 21329 chr11 114856972 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 21330 chr11 114857719 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21331 chr11 114877508 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 21332 chr11 114877894 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21333 chr11 114911815 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21334 chr11 114916466 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21335 chr11 114916743 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21336 chr11 114926872 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 21337 chr11 114934637 . a aCTCTC 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 21338 chr11 114937570 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21339 chr11 114942596 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 21340 chr11 114944083 . C T 6.79 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 37,6,0:2:0:1/1:49 | |
| 21341 chr11 114946058 . AAGT AACTCCAGTAGT 10.8 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=48 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 21342 chr11 114960355 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 21343 chr11 114963089 . AAGAGA AAGA 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 21344 chr11 114973730 . CCTCTT C 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 21345 chr11 114978721 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21346 chr11 114984286 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21347 chr11 114992654 . C T 10.2 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 41,6,0:2:0:1/1:49 | |
| 21348 chr11 115000394 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21349 chr11 115007226 . T TGACGTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21350 chr11 115007550 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21351 chr11 115019514 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21352 chr11 115047391 . A G 10.4 . DP=24;AF1=0.5;CI95=0.5,0.5;DP4=0,8,0,5;MQ=48;PV4=1,0.00075,0.0031,1 PL:DP:SP:GT:GQ 40,0,171:13:0:0/1:43 | |
| 21353 chr11 115047402 . C G 7.8 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=0,7,0,4;MQ=49;PV4=1,0.09,0.0074,1 PL:DP:SP:GT:GQ 37,0,87:11:0:0/1:40 | |
| 21354 chr11 115050180 . A G 4.83 . DP=2;AF1=0.51;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,14:2:0:0/1:17 | |
| 21355 chr11 115060005 . T C 6.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 21356 chr11 115068604 . T C 5.5 . DP=2;AF1=0.5063;CI95=0.5,0.5;DP4=0,1,1,0;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,16:2:0:0/1:19 | |
| 21357 chr11 115069689 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 21358 chr11 115069951 . T C 25.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=46 PL:DP:SP:GT:GQ 57,6,0:2:0:1/1:49 | |
| 21359 chr11 115076264 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21360 chr11 115081426 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21361 chr11 115130998 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21362 chr11 115136373 . AAT A 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 21363 chr11 115176094 . TTTA TTTATTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21364 chr11 115191265 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21365 chr11 115194835 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21366 chr11 115196153 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 21367 chr11 115209393 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 21368 chr11 115212725 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 21369 chr11 115214884 . A AT 22.2 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=50 PL:DP:SP:GT:GQ 61,6,0:2:0:1/1:49 | |
| 21370 chr11 115216827 . AC ACC 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 21371 chr11 115217084 . A ACTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21372 chr11 115218832 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 21373 chr11 115235974 . gattcatt gatt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21374 chr11 115254166 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21375 chr11 115259824 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 21376 chr11 115261273 . AA AACACCCCCGCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21377 chr11 115279748 . AAGGGAGCCCAGG AAGG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 21378 chr11 115314710 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21379 chr11 115327879 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 21380 chr11 115328825 . G GAACAAGGTCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21381 chr11 115333602 . GAATA G 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21382 chr11 115337373 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21383 chr11 115338469 . GAA GAAGAAAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21384 chr11 115341876 . TTT TTTGACTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21385 chr11 115357679 . TGC TGCAGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21386 chr11 115359925 . AT ATT 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 21387 chr11 115388903 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21388 chr11 115404865 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 21389 chr11 115406869 . GAATCT G 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 21390 chr11 115411301 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21391 chr11 115430605 . G C 7.8 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 21392 chr11 115433836 . t tGACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21393 chr11 115476877 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21394 chr11 115485205 . T C 13.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 45,6,0:2:0:1/1:49 | |
| 21395 chr11 115496912 . CT CTGATAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21396 chr11 115497299 . G C 22.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 54,6,0:2:0:1/1:49 | |
| 21397 chr11 115499062 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 21398 chr11 115510519 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 21399 chr11 115513620 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 21400 chr11 115535793 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21401 chr11 115542012 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 21402 chr11 115547908 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21403 chr11 115550309 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21404 chr11 115552918 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 21405 chr11 115559153 . T TCCAATA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21406 chr11 115561760 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 21407 chr11 115563246 . C T 4.61 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=50 PL:DP:SP:GT:GQ 34,6,0:2:0:1/1:49 | |
| 21408 chr11 115585951 . T C 51.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=43 PL:DP:SP:GT:GQ 83,6,0:2:0:1/1:49 | |
| 21409 chr11 115588299 . A AATAGGC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 21410 chr11 115597063 . g gACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21411 chr11 115613885 . G C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 21412 chr11 115616612 . C T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 21413 chr11 115660898 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21414 chr11 115666802 . T A 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 21415 chr11 115672440 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 21416 chr11 115675347 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 21417 chr11 115680356 . g gC 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 21418 chr11 115718309 . AC ACGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21419 chr11 115719276 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21420 chr11 115753123 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21421 chr11 115753664 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21422 chr11 115757167 . G GGA 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 21423 chr11 115759728 . C T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 21424 chr11 115761479 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 21425 chr11 115769997 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21426 chr11 115772482 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 21427 chr11 115772491 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21428 chr11 115772864 . G A 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 21429 chr11 115775534 . t tCC 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 21430 chr11 115776161 . C CTATT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21431 chr11 115780091 . G A 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 21432 chr11 115788327 . G A 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 21433 chr11 115793794 . T C 11.1 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 42,6,0:2:0:1/1:49 | |
| 21434 chr11 115820722 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 21435 chr11 115836916 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 21436 chr11 115846212 . TTCA T 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 21437 chr11 115847151 . CTTT CT 4.42 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 40,0,44:2:0:0/1:42 | |
| 21438 chr11 115860687 . T A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 21439 chr11 115873994 . c cGAGGGAAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21440 chr11 115905937 . G T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 21441 chr11 115908410 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 21442 chr11 115917920 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 21443 chr11 115924414 . G A 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 21444 chr11 115933686 . G A 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 21445 chr11 115943241 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21446 chr11 115951004 . G T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 21447 chr11 115962285 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 21448 chr11 115967658 . AG AGTG 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=49;PV4=1,1,1,0.016 PL:DP:SP:GT:GQ 41,0,58:3:0:0/1:44 | |
| 21449 chr11 115984190 . c cCT 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 21450 chr11 115986207 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 21451 chr11 115989560 . C G 6.2 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,44:2:0:0/1:37 | |
| 21452 chr11 116004995 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21453 chr11 116007825 . A C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 21454 chr11 116015533 . C A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 21455 chr11 116023015 . t tCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21456 chr11 116029207 . GGTG GG 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 21457 chr11 116041628 . C T 4.13 . DP=2;AF1=0.5002;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,29:2:0:0/1:30 | |
| 21458 chr11 116044481 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 21459 chr11 116048764 . C T 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21460 chr11 116050299 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 21461 chr11 116060133 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21462 chr11 116062039 . T C 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 21463 chr11 116074878 . TT TTGAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21464 chr11 116075126 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 21465 chr11 116083845 . G T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 21466 chr11 116101994 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 21467 chr11 116110122 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21468 chr11 116116924 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21469 chr11 116124587 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 21470 chr11 116131490 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21471 chr11 116135052 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 21472 chr11 116142097 . AA AACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21473 chr11 116152225 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 21474 chr11 116167532 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 21475 chr11 116173684 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 21476 chr11 116184920 . A G 54.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=43 PL:DP:SP:GT:GQ 86,6,0:2:0:1/1:49 | |
| 21477 chr11 116189188 . T TGGGAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21478 chr11 116194197 . G A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 21479 chr11 116195964 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 21480 chr11 116198840 . A C 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 21481 chr11 116234337 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 21482 chr11 116235000 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 21483 chr11 116238786 . cc cCGCAAc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21484 chr11 116238946 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 21485 chr11 116248348 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21486 chr11 116248374 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21487 chr11 116263125 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21488 chr11 116269868 . G GCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21489 chr11 116273905 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 21490 chr11 116276086 . A C 37.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=42 PL:DP:SP:GT:GQ 69,6,0:2:0:1/1:49 | |
| 21491 chr11 116278227 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 21492 chr11 116280965 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21493 chr11 116284349 . TGC TGCGC 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 21494 chr11 116296269 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21495 chr11 116304392 . T G 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,44:2:0:0/1:36 | |
| 21496 chr11 116311186 . C G 24.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=46 PL:DP:SP:GT:GQ 56,6,0:2:0:1/1:49 | |
| 21497 chr11 116352888 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 21498 chr11 116354039 . a aGACACGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21499 chr11 116356797 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 21500 chr11 116356999 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21501 chr11 116357004 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21502 chr11 116373438 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21503 chr11 116379364 . a aG 3.81 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 21504 chr11 116396341 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 21505 chr11 116398867 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21506 chr11 116404023 . C A 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21507 chr11 116404196 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21508 chr11 116485942 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 21509 chr11 116522330 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21510 chr11 116527074 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 21511 chr11 116527258 . t tGGGTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21512 chr11 116533436 . C A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 21513 chr11 116543452 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21514 chr11 116552099 . T TGCCGTCCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21515 chr11 116552997 . ga gAAa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21516 chr11 116556496 . C G 4.77 . DP=2;AF1=0.5004;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,27:2:0:0/1:29 | |
| 21517 chr11 116557155 . A G 7.59 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=50 PL:DP:SP:GT:GQ 38,6,0:2:0:1/1:49 | |
| 21518 chr11 116564616 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 21519 chr11 116599638 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21520 chr11 116604449 . AGGCTGGGGC AGGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21521 chr11 116619896 . C A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 21522 chr11 116644779 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21523 chr11 116650454 . ATCTCT ATCT 28.5 . INDEL;DP=8;AF1=0.5;CI95=0.5,0.5;DP4=5,0,2,0;MQ=50;PV4=1,0.49,1,1 PL:DP:SP:GT:GQ 66,0,136:7:0:0/1:69 | |
| 21524 chr11 116655747 . G C 4.13 . DP=17;AF1=0.4998;CI95=0.5,0.5;DP4=3,3,4,0;MQ=49;PV4=0.2,0.077,0.038,1 PL:DP:SP:GT:GQ 32,0,154:10:7:0/1:35 | |
| 21525 chr11 116659148 . G T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 21526 chr11 116662579 . C T 28.5 . DP=13;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=49 PL:DP:SP:GT:GQ 61,12,0:4:0:1/1:72 | |
| 21527 chr11 116669321 . g gCC 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 21528 chr11 116684560 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 21529 chr11 116692694 . G A 27 . DP=41;AF1=1;CI95=0.5,1;DP4=0,0,1,2;MQ=48 PL:DP:SP:GT:GQ 59,9,0:3:0:1/1:63 | |
| 21530 chr11 116693464 . C T 99 . DP=53;AF1=1;CI95=1,1;DP4=0,1,2,14;MQ=47;PV4=1,1,0.11,1 PL:DP:SP:GT:GQ 158,24,0:17:0:1/1:96 | |
| 21531 chr11 116694567 . CC CCTCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21532 chr11 116700592 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21533 chr11 116701109 . TCG T 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 21534 chr11 116701535 . T C 10.2 . DP=20;AF1=0.6243;CI95=0.5,1;DP4=1,0,2,1;MQ=49;PV4=1,1,0.33,1 PL:DP:SP:GT:GQ 39,0,4:4:0:0/1:6 | |
| 21535 chr11 116703640 . G C 45.3 . DP=25;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=49 PL:DP:SP:GT:GQ 78,15,0:5:0:1/1:75 | |
| 21536 chr11 116705905 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21537 chr11 116707684 . A G 99 . DP=16;AF1=1;CI95=1,1;DP4=1,0,14,0;MQ=44;PV4=1,1,0.00015,1 PL:DP:SP:GT:GQ 199,22,0:15:0:1/1:88 | |
| 21538 chr11 116720089 . T C 99 . DP=15;AF1=1;CI95=1,1;DP4=0,0,0,14;MQ=44 PL:DP:SP:GT:GQ 216,42,0:14:0:1/1:99 | |
| 21539 chr11 116720513 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21540 chr11 116724204 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 21541 chr11 116729196 . T C 99 . DP=23;AF1=0.5;CI95=0.5,0.5;DP4=0,7,1,8;MQ=46;PV4=1,0.29,0.0024,1 PL:DP:SP:GT:GQ 164,0,128:16:0:0/1:99 | |
| 21542 chr11 116734688 . G A 13.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 21543 chr11 116744447 . T C 87 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=0,6,0,8;MQ=47;PV4=1,2.5e-05,0.016,1 PL:DP:SP:GT:GQ 117,0,162:14:0:0/1:99 | |
| 21544 chr11 116747009 . G A 3.01 . DP=25;AF1=0.4997;CI95=0.5,0.5;DP4=6,4,3,0;MQ=49;PV4=0.5,0.24,0.00036,0.18 PL:DP:SP:GT:GQ 30,0,193:13:3:0/1:33 | |
| 21545 chr11 116771546 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21546 chr11 116787158 . C A 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 21547 chr11 116799085 . A T 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21548 chr11 116816392 . t tAA 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 21549 chr11 116819347 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 21550 chr11 116824884 . T G 37.5 . DP=8;AF1=1;CI95=0.5,1;DP4=0,1,0,6;MQ=48;PV4=1,1,0.27,1 PL:DP:SP:GT:GQ 69,7,0:7:0:1/1:57 | |
| 21551 chr11 116827565 . A G 5.29 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=50 PL:DP:SP:GT:GQ 35,6,0:2:0:1/1:49 | |
| 21552 chr11 116840490 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 21553 chr11 116849276 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21554 chr11 116850022 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21555 chr11 116877159 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21556 chr11 116908111 . AT ATGTTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21557 chr11 116923087 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 21558 chr11 116948020 . A G 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,1;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 21559 chr11 116950176 . G T 3.52 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=50 PL:DP:SP:GT:GQ 33,9,0:3:0:1/1:63 | |
| 21560 chr11 117079711 . T TTTTA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 21561 chr11 117092453 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21562 chr11 117095361 . C T 20.8 . DP=18;AF1=0.6243;CI95=0.5,1;DP4=1,0,4,0;MQ=49;PV4=1,1,0.22,1 PL:DP:SP:GT:GQ 50,0,4:5:0:0/1:6 | |
| 21563 chr11 117097256 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21564 chr11 117101383 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21565 chr11 117109270 . G T 27 . DP=15;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=44 PL:DP:SP:GT:GQ 59,9,0:3:0:1/1:63 | |
| 21566 chr11 117109614 . T G 9.52 . DP=27;AF1=0.5;CI95=0.5,0.5;DP4=1,17,6,0;MQ=49;PV4=5.2e-05,0.00011,0.00057,0.27 PL:DP:SP:GT:GQ 39,0,254:24:43:0/1:42 | |
| 21567 chr11 117123777 . A C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 21568 chr11 117152673 . A C 6.98 . DP=23;AF1=0.4999;CI95=0.5,0.5;DP4=2,2,3,0;MQ=49;PV4=0.43,0.075,0.015,1 PL:DP:SP:GT:GQ 36,0,107:7:4:0/1:39 | |
| 21569 chr11 117153777 . G C 7.8 . DP=3;AF1=0.5004;CI95=0.5,0.5;DP4=1,0,2,0;MQ=48;PV4=1,0.05,0.11,1 PL:DP:SP:GT:GQ 37,0,27:3:0:0/1:30 | |
| 21570 chr11 117154667 . ctggt c 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21571 chr11 117154720 . AG AGG 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 21572 chr11 117155695 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 21573 chr11 117155822 . G C 6.98 . DP=6;AF1=0.5001;CI95=0.5,0.5;DP4=1,0,0,2;MQ=47;PV4=0.33,0.089,1,1 PL:DP:SP:GT:GQ 36,0,33:3:0:0/1:34 | |
| 21574 chr11 117158746 . TA TAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21575 chr11 117160347 . A G 99 . DP=38;AF1=1;CI95=1,1;DP4=0,0,16,13;MQ=48 PL:DP:SP:GT:GQ 242,87,0:29:0:1/1:99 | |
| 21576 chr11 117163765 . C A 99 . DP=33;AF1=1;CI95=1,1;DP4=0,0,17,9;MQ=49 PL:DP:SP:GT:GQ 205,78,0:26:0:1/1:99 | |
| 21577 chr11 117163824 . C G 92 . DP=36;AF1=0.5;CI95=0.5,0.5;DP4=10,14,2,5;MQ=49;PV4=0.68,0.0087,3.6e-15,0.5 PL:DP:SP:GT:GQ 122,0,255:31:2:0/1:99 | |
| 21578 chr11 117185046 . T TGACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21579 chr11 117204343 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 21580 chr11 117208377 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21581 chr11 117209268 . C T 6.98 . DP=9;AF1=0.4999;CI95=0.5,0.5;DP4=2,0,3,0;MQ=49;PV4=1,0.12,0.25,1 PL:DP:SP:GT:GQ 36,0,55:5:0:0/1:39 | |
| 21582 chr11 117210880 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21583 chr11 117216116 . C T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 21584 chr11 117230133 . C G 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 21585 chr11 117257807 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21586 chr11 117265871 . GCT G 22.5 . INDEL;DP=7;AF1=0.5;CI95=0.5,0.5;DP4=2,0,0,2;MQ=50;PV4=0.33,1,1,0.0014 PL:DP:SP:GT:GQ 60,0,43:4:5:0/1:46 | |
| 21587 chr11 117280275 . G A 18.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=45 PL:DP:SP:GT:GQ 50,6,0:2:0:1/1:49 | |
| 21588 chr11 117282800 . G T 69.1 . DP=37;AF1=1;CI95=0.5,1;DP4=0,0,4,2;MQ=49 PL:DP:SP:GT:GQ 102,18,0:6:0:1/1:90 | |
| 21589 chr11 117288387 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21590 chr11 117301831 . C A 6.79 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 37,6,0:2:0:1/1:49 | |
| 21591 chr11 117306291 . G T 35.5 . DP=10;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=48 PL:DP:SP:GT:GQ 68,12,0:4:0:1/1:72 | |
| 21592 chr11 117308140 . GGAGAGAGAGAG GGAGAGAGAGAGAGAG 99 . INDEL;DP=22;AF1=0.5;CI95=0.5,0.5;DP4=0,3,1,8;MQ=50;PV4=1,1,0.29,1 PL:DP:SP:GT:GQ 224,0,53:12:0:0/1:56 | |
| 21593 chr11 117310299 . TA TAGCCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21594 chr11 117315974 . AACACACACACACA AACACACACACA 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 21595 chr11 117316294 . GT GTTCCCGGCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21596 chr11 117317211 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21597 chr11 117319451 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21598 chr11 117320556 . GA G 20.3 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=50 PL:DP:SP:GT:GQ 59,6,0:2:0:1/1:49 | |
| 21599 chr11 117332352 . A G 26.1 . DP=6;AF1=0.505;CI95=0.5,0.5;DP4=0,1,0,4;MQ=48;PV4=1,0.14,0.26,1 PL:DP:SP:GT:GQ 56,0,17:5:0:0/1:20 | |
| 21600 chr11 117335722 . T C 65.4 . DP=33;AF1=1;CI95=0.5,1;DP4=1,0,3,5;MQ=48;PV4=0.44,1,0.25,1 PL:DP:SP:GT:GQ 98,13,0:9:0:1/1:65 | |
| 21601 chr11 117342462 . T C 22 . DP=8;AF1=0.5;CI95=0.5,0.5;DP4=4,0,4,0;MQ=49;PV4=1,0.0048,0.046,1 PL:DP:SP:GT:GQ 52,0,119:8:0:0/1:55 | |
| 21602 chr11 117368003 . AC ACTC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 21603 chr11 117368805 . A T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 21604 chr11 117375596 . G A 99 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=7,2,6,1;MQ=47;PV4=1,0.004,5.9e-12,1 PL:DP:SP:GT:GQ 172,0,255:16:0:0/1:99 | |
| 21605 chr11 117382646 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21606 chr11 117391966 . G A 51 . DP=11;AF1=0.5;CI95=0.5,0.5;DP4=1,4,0,5;MQ=49;PV4=1,0.0024,0.053,1 PL:DP:SP:GT:GQ 81,0,169:10:0:0/1:84 | |
| 21607 chr11 117392750 . G GAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21608 chr11 117402071 . G T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 21609 chr11 117403017 . G A 3.55 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21610 chr11 117403235 . G T 38 . DP=35;AF1=0.5005;CI95=0.5,0.5;DP4=0,2,3,3;MQ=50;PV4=0.46,0.016,0.3,1 PL:DP:SP:GT:GQ 68,0,27:8:3:0/1:30 | |
| 21611 chr11 117406111 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 21612 chr11 117418584 . G T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 21613 chr11 117445126 . C A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 21614 chr11 117449769 . G A 6.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 21615 chr11 117452368 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 21616 chr11 117453801 . C T 25.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=45 PL:DP:SP:GT:GQ 57,6,0:2:0:1/1:49 | |
| 21617 chr11 117456463 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21618 chr11 117457647 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 21619 chr11 117458700 . G T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 21620 chr11 117465155 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 21621 chr11 117466934 . G GCGGCTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21622 chr11 117467406 . AAAGTA AA 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 21623 chr11 117473831 . aaca aa 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 21624 chr11 117476733 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 21625 chr11 117477336 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 21626 chr11 117481514 . taca ta 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 21627 chr11 117484144 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21628 chr11 117495806 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21629 chr11 117497997 . CCGC CC 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 21630 chr11 117499701 . C CAGGATGAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21631 chr11 117503423 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21632 chr11 117519276 . T A 39.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=43 PL:DP:SP:GT:GQ 71,6,0:2:0:1/1:49 | |
| 21633 chr11 117529216 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 21634 chr11 117551936 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21635 chr11 117554993 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21636 chr11 117557540 . A G 13.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 21637 chr11 117562377 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21638 chr11 117564244 . CAG CAGAAG 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 21639 chr11 117580782 . TGA TGAAGACGGGA 4.42 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 40,0,44:2:0:0/1:42 | |
| 21640 chr11 117583764 . T TAAA 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 21641 chr11 117584884 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21642 chr11 117586169 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21643 chr11 117588121 . AC ACCTCTCTCC 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=49 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 21644 chr11 117590799 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 21645 chr11 117600433 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21646 chr11 117617683 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 21647 chr11 117619791 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 21648 chr11 117623105 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 21649 chr11 117624651 . GA GAGCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21650 chr11 117626427 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21651 chr11 117630661 . T TCCCACAA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 21652 chr11 117632303 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 21653 chr11 117632804 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 21654 chr11 117633769 . A T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 21655 chr11 117642319 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 21656 chr11 117646805 . A T 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21657 chr11 117647496 . C T 66 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=5,2,4,1;MQ=48;PV4=1,0.027,0.00077,0.29 PL:DP:SP:GT:GQ 96,0,204:12:0:0/1:99 | |
| 21658 chr11 117670657 . C T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 21659 chr11 117674892 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21660 chr11 117676027 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21661 chr11 117685350 . T C 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,43:2:0:0/1:36 | |
| 21662 chr11 117702751 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21663 chr11 117703320 . G GCTGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21664 chr11 117705001 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21665 chr11 117718885 . C G 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21666 chr11 117744795 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 21667 chr11 117758638 . A T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 21668 chr11 117761480 . A G 10.2 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=48 PL:DP:SP:GT:GQ 41,6,0:2:0:1/1:49 | |
| 21669 chr11 117767929 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21670 chr11 117774291 . A C 18 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=49 PL:DP:SP:GT:GQ 50,9,0:3:0:1/1:63 | |
| 21671 chr11 117774607 . CC CCTC 7.35 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 21672 chr11 117792716 . A G 7.15 . DP=2;AF1=0.5263;CI95=0.5,1;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,10:2:0:0/1:13 | |
| 21673 chr11 117799630 . CC CCCCCCTGTCGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21674 chr11 117800169 . C T 12 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=45 PL:DP:SP:GT:GQ 43,6,0:2:0:1/1:49 | |
| 21675 chr11 117807075 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21676 chr11 117816774 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21677 chr11 117827231 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 21678 chr11 117831773 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21679 chr11 117841617 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21680 chr11 117842693 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21681 chr11 117844011 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 21682 chr11 117855972 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 21683 chr11 117859046 . A C 6.98 . DP=5;AF1=0.4999;CI95=0.5,0.5;DP4=2,0,3,0;MQ=48;PV4=1,0.0016,0.15,1 PL:DP:SP:GT:GQ 36,0,77:5:0:0/1:39 | |
| 21684 chr11 117864047 . A G 42.1 . DP=46;AF1=0.9966;CI95=0.5,1;DP4=0,1,2,3;MQ=48;PV4=1,1,0.28,1 PL:DP:SP:GT:GQ 71,1,0:6:0:1/1:23 | |
| 21685 chr11 117865874 . G A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 21686 chr11 117868404 . g gTGTCAGCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21687 chr11 117869591 . C T 30 . DP=37;AF1=0.5002;CI95=0.5,0.5;DP4=1,0,2,2;MQ=49;PV4=1,0.015,0.28,1 PL:DP:SP:GT:GQ 60,0,32:5:0:0/1:35 | |
| 21688 chr11 117869670 . A G 18 . DP=9;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=49 PL:DP:SP:GT:GQ 50,9,0:3:0:1/1:63 | |
| 21689 chr11 117885501 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21690 chr11 117888564 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 21691 chr11 117891070 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 21692 chr11 117893800 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 21693 chr11 117898419 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 21694 chr11 117900523 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21695 chr11 117907600 . tctc tCTCTAGAACctc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21696 chr11 117923358 . G A 9.52 . DP=4;AF1=0.5;CI95=0.5,0.5;DP4=2,0,2,0;MQ=48;PV4=1,0.13,0.15,1 PL:DP:SP:GT:GQ 39,0,68:4:0:0/1:42 | |
| 21697 chr11 117926593 . A G 9.31 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 21698 chr11 117955568 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 21699 chr11 117966886 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21700 chr11 117979744 . C A 99 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=43 PL:DP:SP:GT:GQ 150,15,0:5:0:1/1:75 | |
| 21701 chr11 117982495 . T G 35.1 . DP=17;AF1=1;CI95=1,1;DP4=0,0,7,0;MQ=50 PL:DP:SP:GT:GQ 68,21,0:7:0:1/1:84 | |
| 21702 chr11 117984015 . C T 81 . DP=31;AF1=0.5;CI95=0.5,0.5;DP4=4,12,6,5;MQ=49;PV4=0.22,2.4e-09,0.0072,1 PL:DP:SP:GT:GQ 111,0,255:27:7:0/1:99 | |
| 21703 chr11 117988082 . T C 99 . DP=38;AF1=1;CI95=1,1;DP4=0,0,14,2;MQ=48 PL:DP:SP:GT:GQ 165,48,0:16:0:1/1:99 | |
| 21704 chr11 117989115 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 21705 chr11 118018287 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 21706 chr11 118020722 . t tGTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21707 chr11 118031741 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21708 chr11 118032618 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 21709 chr11 118034470 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21710 chr11 118037577 . G A 3.01 . DP=16;AF1=0.4997;CI95=0.5,0.5;DP4=9,0,3,1;MQ=50;PV4=0.31,0.027,0.07,0.12 PL:DP:SP:GT:GQ 30,0,138:13:0:0/1:33 | |
| 21711 chr11 118038741 . C T 7.59 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 38,6,0:2:0:1/1:49 | |
| 21712 chr11 118055585 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21713 chr11 118074117 . A G 3.02 . DP=9;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21714 chr11 118074337 . A G 99 . DP=47;AF1=1;CI95=1,1;DP4=0,0,15,27;MQ=46 PL:DP:SP:GT:GQ 255,126,0:42:0:1/1:99 | |
| 21715 chr11 118083664 . A G 77.1 . DP=23;AF1=1;CI95=1,1;DP4=0,0,1,6;MQ=48 PL:DP:SP:GT:GQ 110,21,0:7:0:1/1:84 | |
| 21716 chr11 118100504 . G A 54 . DP=8;AF1=0.5;CI95=0.5,0.5;DP4=4,0,3,1;MQ=48;PV4=1,5.7e-05,0.0072,1 PL:DP:SP:GT:GQ 84,0,134:8:0:0/1:87 | |
| 21717 chr11 118107805 . A G 99 . DP=52;AF1=1;CI95=1,1;DP4=0,0,7,7;MQ=49 PL:DP:SP:GT:GQ 152,42,0:14:0:1/1:99 | |
| 21718 chr11 118110977 . T C 45.5 . DP=57;AF1=1;CI95=0.5,1;DP4=0,1,1,7;MQ=49;PV4=1,0.22,0.28,1 PL:DP:SP:GT:GQ 76,4,0:9:0:1/1:45 | |
| 21719 chr11 118113099 . a aCATTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21720 chr11 118119625 . G A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 21721 chr11 118127521 . G C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 21722 chr11 118128026 . T G 5.46 . DP=15;AF1=0.4999;CI95=0.5,0.5;DP4=1,6,1,3;MQ=49;PV4=1,0.014,0.022,0.26 PL:DP:SP:GT:GQ 34,0,182:11:0:0/1:37 | |
| 21723 chr11 118128272 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21724 chr11 118134140 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 21725 chr11 118134785 . T G 79 . DP=24;AF1=0.5;CI95=0.5,0.5;DP4=7,2,12,0;MQ=49;PV4=0.17,0.00056,0.043,1 PL:DP:SP:GT:GQ 109,0,212:21:8:0/1:99 | |
| 21726 chr11 118152215 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 21727 chr11 118155988 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 21728 chr11 118179153 . AT ATCTCT 7.35 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 21729 chr11 118181912 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 21730 chr11 118185291 . T C 10.4 . DP=11;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,3;MQ=48;PV4=1,0.15,0.052,1 PL:DP:SP:GT:GQ 40,0,87:7:0:0/1:43 | |
| 21731 chr11 118186312 . C A 37.5 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=48 PL:DP:SP:GT:GQ 70,12,0:4:0:1/1:72 | |
| 21732 chr11 118188168 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 21733 chr11 118205693 . A G 9.31 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 21734 chr11 118210106 . G C 23 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=7,0,4,0;MQ=49;PV4=1,1.5e-05,0.018,1 PL:DP:SP:GT:GQ 53,0,188:11:0:0/1:56 | |
| 21735 chr11 118215075 . Aggctggctggctggctggctg Aggctggctggctggctg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21736 chr11 118224071 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 21737 chr11 118239620 . C CCCACA 3.25 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,1;MQ=50;PV4=1,1,1,0.34 PL:DP:SP:GT:GQ 38,0,114:4:0:0/1:41 | |
| 21738 chr11 118245565 . ATT A 72.5 . INDEL;DP=14;AF1=0.5;CI95=0.5,0.5;DP4=7,0,4,0;MQ=50;PV4=1,0.06,1,0.25 PL:DP:SP:GT:GQ 110,0,181:11:0:0/1:99 | |
| 21739 chr11 118250722 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21740 chr11 118263398 . G T 30.1 . DP=5;AF1=0.5129;CI95=0.5,0.5;DP4=1,0,3,0;MQ=42;PV4=1,1,0.16,1 PL:DP:SP:GT:GQ 60,0,13:4:0:0/1:16 | |
| 21741 chr11 118263413 . A T 12.3 . DP=10;AF1=0.5;CI95=0.5,0.5;DP4=3,0,2,0;MQ=46;PV4=1,0.25,0.041,1 PL:DP:SP:GT:GQ 42,0,86:5:0:0/1:45 | |
| 21742 chr11 118286256 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21743 chr11 118292072 . T C 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21744 chr11 118314390 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 21745 chr11 118314475 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21746 chr11 118330168 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21747 chr11 118351469 . c cGCGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21748 chr11 118355049 . A G 35 . DP=21;AF1=0.5;CI95=0.5,0.5;DP4=3,8,0,7;MQ=49;PV4=0.25,0.0028,8.7e-07,1 PL:DP:SP:GT:GQ 65,0,239:18:6:0/1:68 | |
| 21749 chr11 118367197 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21750 chr11 118379865 . T C 10.2 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 41,6,0:2:0:1/1:49 | |
| 21751 chr11 118399471 . G A 99 . DP=32;AF1=0.5;CI95=0.5,0.5;DP4=8,9,6,4;MQ=48;PV4=0.69,0.00015,6.6e-08,1 PL:DP:SP:GT:GQ 158,0,255:27:2:0/1:99 | |
| 21752 chr11 118405343 . G A 99 . DP=18;AF1=1;CI95=1,1;DP4=0,0,0,11;MQ=44 PL:DP:SP:GT:GQ 194,33,0:11:0:1/1:99 | |
| 21753 chr11 118470939 . A T 3.01 . DP=4;AF1=0.4997;CI95=0.5,0.5;DP4=0,2,1,0;MQ=48;PV4=0.33,0.14,0,1 PL:DP:SP:GT:GQ 30,0,83:3:0:0/1:33 | |
| 21754 chr11 118472669 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21755 chr11 118482032 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 21756 chr11 118498888 . G T 7.8 . DP=38;AF1=0.5;CI95=0.5,0.5;DP4=4,13,1,4;MQ=48;PV4=1,0.16,0.046,1 PL:DP:SP:GT:GQ 37,0,203:22:0:0/1:40 | |
| 21757 chr11 118498889 . C A 35 . DP=37;AF1=0.5;CI95=0.5,0.5;DP4=6,3,0,8;MQ=48;PV4=0.009,0.0046,0.16,1 PL:DP:SP:GT:GQ 65,0,205:17:20:0/1:68 | |
| 21758 chr11 118502086 . A C 3.01 . DP=3;AF1=0.4997;CI95=0.5,0.5;DP4=2,0,1,0;MQ=48;PV4=1,0.16,0,0 PL:DP:SP:GT:GQ 30,0,83:3:0:0/1:33 | |
| 21759 chr11 118503152 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 21760 chr11 118528358 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 21761 chr11 118534230 . A T 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,36:2:0:0/1:34 | |
| 21762 chr11 118566199 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 21763 chr11 118602131 . cca c 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 21764 chr11 118616561 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21765 chr11 118641942 . TTAA T 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 21766 chr11 118684242 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21767 chr11 118712926 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21768 chr11 118739056 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 21769 chr11 118743516 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 21770 chr11 118746023 . t tGCCACG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21771 chr11 118750152 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 21772 chr11 118751879 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21773 chr11 118765267 . G C 11.3 . DP=46;AF1=0.5;CI95=0.5,0.5;DP4=4,11,2,3;MQ=50;PV4=0.61,0.0036,0.0015,1 PL:DP:SP:GT:GQ 41,0,255:20:2:0/1:44 | |
| 21774 chr11 118765962 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21775 chr11 118770044 . TC TCGGCGC 5.08 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,1,1,0.061 PL:DP:SP:GT:GQ 41,0,69:3:0:0/1:44 | |
| 21776 chr11 118773440 . A G 4.61 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=44 PL:DP:SP:GT:GQ 34,6,0:2:0:1/1:49 | |
| 21777 chr11 118778249 . C CAGAAGTCCAGAAAA 99 . INDEL;DP=53;AF1=1;CI95=1,1;DP4=0,0,8,29;MQ=50 PL:DP:SP:GT:GQ 255,111,0:37:0:1/1:99 | |
| 21778 chr11 118778300 . G T 4.13 . DP=11;AF1=0.4998;CI95=0.5,0.5;DP4=0,6,0,3;MQ=48;PV4=1,0.018,0.074,1 PL:DP:SP:GT:GQ 32,0,152:9:0:0/1:35 | |
| 21779 chr11 118778306 . C T 6.2 . DP=6;AF1=0.5001;CI95=0.5,0.5;DP4=0,2,0,2;MQ=44;PV4=1,1,0.23,1 PL:DP:SP:GT:GQ 35,0,31:4:0:0/1:33 | |
| 21780 chr11 118780333 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21781 chr11 118785453 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 21782 chr11 118791142 . G T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 21783 chr11 118793964 . A T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 21784 chr11 118795165 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 21785 chr11 118796112 . GGCC G 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 21786 chr11 118811290 . C A 6.98 . DP=2;AF1=0.5004;CI95=0.5,0.5;DP4=0,1,0,1;MQ=41;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,27:2:0:0/1:29 | |
| 21787 chr11 118832686 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 21788 chr11 118854132 . C G 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,1;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,38:2:0:0/1:32 | |
| 21789 chr11 118857402 . c cGT 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 21790 chr11 118858370 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21791 chr11 118858388 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21792 chr11 118873910 . TGG TGGG 43 . INDEL;DP=8;AF1=1;CI95=0.5,1;DP4=0,0,2,2;MQ=23 PL:DP:SP:GT:GQ 83,12,0:4:0:1/1:72 | |
| 21793 chr11 118881828 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21794 chr11 118886117 . C T 41 . DP=24;AF1=0.5;CI95=0.5,0.5;DP4=3,12,2,6;MQ=49;PV4=1,1.7e-06,0.33,1 PL:DP:SP:GT:GQ 71,0,255:23:0:0/1:74 | |
| 21795 chr11 118888619 . A G 15.1 . DP=18;AF1=0.5005;CI95=0.5,0.5;DP4=1,0,5,0;MQ=50;PV4=1,0.00047,0.35,0.24 PL:DP:SP:GT:GQ 45,0,27:6:0:0/1:30 | |
| 21796 chr11 118888831 . T C 5.29 . DP=9;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 35,6,0:2:0:1/1:49 | |
| 21797 chr11 118893043 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 21798 chr11 118894000 . A G 10.4 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=4,0,3,0;MQ=49;PV4=1,0.002,0.14,1 PL:DP:SP:GT:GQ 40,0,135:7:0:0/1:43 | |
| 21799 chr11 118894739 . caaa ca 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 21800 chr11 118920453 . T C 30.3 . DP=11;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=50 PL:DP:SP:GT:GQ 63,15,0:5:0:1/1:75 | |
| 21801 chr11 118930117 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 21802 chr11 118935176 . cg cGGAg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21803 chr11 118951877 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21804 chr11 118962804 . A G 99 . DP=26;AF1=1;CI95=1,1;DP4=0,0,19,0;MQ=46 PL:DP:SP:GT:GQ 179,57,0:19:0:1/1:99 | |
| 21805 chr11 118965907 . C T 3.01 . DP=6;AF1=0.4998;CI95=0.5,0.5;DP4=0,2,0,2;MQ=43;PV4=1,0.01,1,0.12 PL:DP:SP:GT:GQ 30,0,37:4:0:0/1:32 | |
| 21806 chr11 118967758 . T C 99 . DP=29;AF1=0.5;CI95=0.5,0.5;DP4=2,4,7,11;MQ=46;PV4=1,0.0014,1.5e-05,1 PL:DP:SP:GT:GQ 255,0,175:24:0:0/1:99 | |
| 21807 chr11 118969142 . GAAAAAAAA GACAAAAAAAAA 12.7 . INDEL;DP=12;AF1=0.5025;CI95=0.5,0.5;DP4=0,4,2,0;MQ=50;PV4=0.067,1,1,0.083 PL:DP:SP:GT:GQ 50,0,20:6:12:0/1:23 | |
| 21808 chr11 118969529 . gc gCGTTCTc 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 21809 chr11 118970875 . T C 13.9 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 45,6,0:2:0:1/1:49 | |
| 21810 chr11 118974878 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 21811 chr11 118978828 . GT GTAT 3.25 . INDEL;DP=10;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,1;MQ=50;PV4=1,1,1,0.035 PL:DP:SP:GT:GQ 38,0,47:4:0:0/1:40 | |
| 21812 chr11 118985151 . T C 24 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=0,6,0,4;MQ=49;PV4=1,0.02,0.0018,1 PL:DP:SP:GT:GQ 54,0,156:10:0:0/1:57 | |
| 21813 chr11 118987634 . T C 3.12 . DP=2;AF1=0.5261;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,10:2:0:0/1:13 | |
| 21814 chr11 119005088 . C T 87.1 . DP=43;AF1=1;CI95=1,1;DP4=0,0,1,6;MQ=48 PL:DP:SP:GT:GQ 120,21,0:7:0:1/1:84 | |
| 21815 chr11 119006293 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 21816 chr11 119015541 . G GAAGGACTCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21817 chr11 119025318 . C A 5.46 . DP=6;AF1=0.4999;CI95=0.5,0.5;DP4=1,1,0,2;MQ=47;PV4=1,0.35,0.065,1 PL:DP:SP:GT:GQ 34,0,48:4:0:0/1:37 | |
| 21818 chr11 119028930 . TTTCTTCTTC TTTCTTCTTCTTC 99 . INDEL;DP=17;AF1=0.5;CI95=0.5,0.5;DP4=8,0,5,0;MQ=50;PV4=1,1,1,0.34 PL:DP:SP:GT:GQ 147,0,200:13:0:0/1:99 | |
| 21819 chr11 119031841 . GCCC GCCCC 99 . INDEL;DP=14;AF1=1;CI95=1,1;DP4=0,0,0,10;MQ=50 PL:DP:SP:GT:GQ 155,30,0:10:0:1/1:99 | |
| 21820 chr11 119033878 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 21821 chr11 119043264 . GA GATA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21822 chr11 119043656 . C T 45.6 . DP=51;AF1=0.5939;CI95=0.5,1;DP4=1,0,1,4;MQ=48;PV4=0.33,0.47,0.19,1 PL:DP:SP:GT:GQ 75,0,5:6:0:0/1:7 | |
| 21823 chr11 119051120 . G GATAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21824 chr11 119052826 . C A 99 . DP=14;AF1=1;CI95=1,1;DP4=1,0,4,8;MQ=48;PV4=0.38,1,0.17,1 PL:DP:SP:GT:GQ 164,21,0:13:0:1/1:84 | |
| 21825 chr11 119056721 . A T 3.01 . DP=7;AF1=0.4997;CI95=0.5,0.5;DP4=1,3,0,2;MQ=47;PV4=1,0.36,0.41,0.36 PL:DP:SP:GT:GQ 30,0,85:6:0:0/1:33 | |
| 21826 chr11 119059404 . G A 36.3 . DP=18;AF1=1;CI95=0.5,1;DP4=0,0,4,1;MQ=50 PL:DP:SP:GT:GQ 69,15,0:5:0:1/1:75 | |
| 21827 chr11 119063908 . C T 99 . DP=33;AF1=1;CI95=1,1;DP4=0,0,11,17;MQ=48 PL:DP:SP:GT:GQ 246,84,0:28:0:1/1:99 | |
| 21828 chr11 119098222 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 21829 chr11 119108312 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21830 chr11 119113875 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21831 chr11 119129909 . t tATAAGACACG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21832 chr11 119144812 . t tTCAGTGACC 12.7 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21833 chr11 119146659 . G C 25.1 . DP=37;AF1=0.5102;CI95=0.5,0.5;DP4=1,0,3,1;MQ=49;PV4=1,0.19,0.28,1 PL:DP:SP:GT:GQ 55,0,14:5:0:0/1:17 | |
| 21834 chr11 119149179 . TTTTCA TTTATTTCA 12.7 . INDEL;DP=4;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21835 chr11 119167422 . CACCT C 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21836 chr11 119170480 . G A 21 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=0,7,0,6;MQ=50;PV4=1,1.6e-05,0.15,1 PL:DP:SP:GT:GQ 51,0,176:13:0:0/1:54 | |
| 21837 chr11 119171135 . T TCTCCGA 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 21838 chr11 119172104 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 21839 chr11 119176206 . A AG 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 21840 chr11 119181170 . T C 99 . DP=11;AF1=1;CI95=0.5,1;DP4=0,1,6,2;MQ=44;PV4=0.33,1,0,1 PL:DP:SP:GT:GQ 220,4,0:9:0:1/1:45 | |
| 21841 chr11 119197333 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 21842 chr11 119206375 . G A 80.5 . DP=32;AF1=1;CI95=0.5,1;DP4=0,1,5,3;MQ=48;PV4=0.44,1,1,1 PL:DP:SP:GT:GQ 113,12,0:9:0:1/1:72 | |
| 21843 chr11 119209979 . T A 99 . DP=15;AF1=1;CI95=1,1;DP4=0,0,13,0;MQ=44 PL:DP:SP:GT:GQ 214,39,0:13:0:1/1:99 | |
| 21844 chr11 119213400 . T A 3.54 . DP=16;AF1=0.4998;CI95=0.5,0.5;DP4=2,3,2,0;MQ=48;PV4=0.43,0.27,0.077,0.22 PL:DP:SP:GT:GQ 31,0,130:7:4:0/1:34 | |
| 21845 chr11 119213782 . A T 39 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=46 PL:DP:SP:GT:GQ 71,9,0:3:0:1/1:63 | |
| 21846 chr11 119214798 . T C 5.29 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 35,6,0:2:0:1/1:49 | |
| 21847 chr11 119216231 . A G 67.2 . DP=17;AF1=1;CI95=0.5,1;DP4=1,0,0,15;MQ=48;PV4=0.062,0.014,0.11,1 PL:DP:SP:GT:GQ 100,17,0:16:0:1/1:85 | |
| 21848 chr11 119218621 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 21849 chr11 119221327 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21850 chr11 119227844 . G C 14.2 . DP=5;AF1=0.5;CI95=0.5,0.5;DP4=1,0,3,0;MQ=48;PV4=1,0.015,0.15,1 PL:DP:SP:GT:GQ 44,0,38:4:0:0/1:40 | |
| 21851 chr11 119229964 . G A 99 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=7,1,7,2;MQ=48;PV4=1,2.5e-06,0.003,1 PL:DP:SP:GT:GQ 137,0,221:17:0:0/1:99 | |
| 21852 chr11 119244095 . C T 50 . DP=11;AF1=0.5;CI95=0.5,0.5;DP4=5,2,3,0;MQ=47;PV4=1,1,0.0026,1 PL:DP:SP:GT:GQ 80,0,208:10:0:0/1:83 | |
| 21853 chr11 119254042 . A T 6.98 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,44:2:0:0/1:38 | |
| 21854 chr11 119259672 . A AC 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 21855 chr11 119291688 . A G 95 . DP=11;AF1=1;CI95=1,1;DP4=0,0,1,8;MQ=48 PL:DP:SP:GT:GQ 128,27,0:9:0:1/1:99 | |
| 21856 chr11 119318306 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 21857 chr11 119332549 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 21858 chr11 119342054 . TA TAA 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 21859 chr11 119346851 . t tGA 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 21860 chr11 119355327 . G A 18.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=40 PL:DP:SP:GT:GQ 50,6,0:2:0:1/1:49 | |
| 21861 chr11 119355341 . G A 35.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=40 PL:DP:SP:GT:GQ 67,6,0:2:0:1/1:49 | |
| 21862 chr11 119356959 . C CT 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 21863 chr11 119358865 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21864 chr11 119381390 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21865 chr11 119383731 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21866 chr11 119394893 . TCAAC T 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 21867 chr11 119402971 . A C 4.83 . DP=2;AF1=0.51;CI95=0.5,0.5;DP4=0,1,1,0;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,14:2:0:0/1:17 | |
| 21868 chr11 119418803 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21869 chr11 119420237 . ac aCc 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 21870 chr11 119423496 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 21871 chr11 119443378 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21872 chr11 119478406 . G GGGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21873 chr11 119480899 . A T 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21874 chr11 119487783 . C G 10.2 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 41,6,0:2:0:1/1:49 | |
| 21875 chr11 119501613 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 21876 chr11 119510644 . A C 30.3 . DP=31;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=50 PL:DP:SP:GT:GQ 63,15,0:5:0:1/1:75 | |
| 21877 chr11 119512904 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21878 chr11 119517046 . tg tGAGAg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21879 chr11 119526101 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21880 chr11 119529491 . A G 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,41:2:0:0/1:39 | |
| 21881 chr11 119541332 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 21882 chr11 119542286 . G A 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21883 chr11 119548494 . C A 3.01 . DP=19;AF1=0.4997;CI95=0.5,0.5;DP4=5,2,0,4;MQ=50;PV4=0.061,0.22,0.0028,0.37 PL:DP:SP:GT:GQ 30,0,114:11:12:0/1:33 | |
| 21884 chr11 119561845 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 21885 chr11 119567998 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21886 chr11 119571775 . CTGGG C 4.42 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 40,0,44:2:0:0/1:42 | |
| 21887 chr11 119607181 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21888 chr11 119608783 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21889 chr11 119612550 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 21890 chr11 119614499 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21891 chr11 119645883 . TG TGAAAAGGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21892 chr11 119651548 . tt tTAGCTGAt 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 21893 chr11 119651885 . G C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 21894 chr11 119652796 . GA GACTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21895 chr11 119665135 . C CT 4.42 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 21896 chr11 119675877 . g gCTTGTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21897 chr11 119692663 . T C 99 . DP=15;AF1=1;CI95=1,1;DP4=0,0,3,10;MQ=45 PL:DP:SP:GT:GQ 255,39,0:13:0:1/1:99 | |
| 21898 chr11 119693176 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21899 chr11 119733822 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21900 chr11 119744160 . C A 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 21901 chr11 119758711 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21902 chr11 119759778 . TGCAG TG 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 21903 chr11 119765392 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21904 chr11 119772958 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 21905 chr11 119773013 . A T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 21906 chr11 119779968 . G GTCCACCCGCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21907 chr11 119816587 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21908 chr11 119818789 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 21909 chr11 119842553 . t tCG 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 21910 chr11 119855574 . T A 3.01 . DP=3;AF1=0.4999;CI95=0.5,0.5;DP4=1,1,0,1;MQ=47;PV4=1,1,0.037,0 PL:DP:SP:GT:GQ 30,0,31:3:0:0/1:30 | |
| 21911 chr11 119863584 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 21912 chr11 119868274 . ct cTAt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21913 chr11 119882745 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 21914 chr11 119890536 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21915 chr11 119900100 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 21916 chr11 119902056 . G C 21.8 . DP=18;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 53,6,0:2:0:1/1:49 | |
| 21917 chr11 119902315 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21918 chr11 119905784 . T TCCGATGGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21919 chr11 119914691 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 21920 chr11 119928001 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21921 chr11 119929584 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21922 chr11 119937188 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21923 chr11 119938190 . G GGCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21924 chr11 119950050 . C CGAAAAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21925 chr11 119961635 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 21926 chr11 119969700 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21927 chr11 119978652 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21928 chr11 119979135 . AG AGAGTACTGTG 7.36 . INDEL;DP=2;AF1=0.502;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,21:2:0:0/1:24 | |
| 21929 chr11 119986167 . T C 23 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=49 PL:DP:SP:GT:GQ 55,9,0:3:0:1/1:63 | |
| 21930 chr11 119989165 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21931 chr11 119991166 . A T 35 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=47 PL:DP:SP:GT:GQ 67,9,0:3:0:1/1:63 | |
| 21932 chr11 119997003 . cc cCTTGc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21933 chr11 119999040 . G T 7.8 . DP=9;AF1=0.5006;CI95=0.5,0.5;DP4=2,0,2,0;MQ=48;PV4=1,1,0.15,1 PL:DP:SP:GT:GQ 37,0,26:4:0:0/1:29 | |
| 21934 chr11 119999191 . A G 13.3 . DP=11;AF1=0.508;CI95=0.5,0.5;DP4=0,1,0,3;MQ=47;PV4=1,0.0076,0.16,1 PL:DP:SP:GT:GQ 43,0,15:4:0:0/1:18 | |
| 21935 chr11 120007889 . G T 9.97 . DP=13;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=50 PL:DP:SP:GT:GQ 42,12,0:4:0:1/1:72 | |
| 21936 chr11 120022664 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21937 chr11 120028302 . C A 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 21938 chr11 120036502 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21939 chr11 120041348 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21940 chr11 120060346 . C G 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,0,1;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 21941 chr11 120061334 . C G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 21942 chr11 120062521 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21943 chr11 120066117 . C T 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 21944 chr11 120069887 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21945 chr11 120085092 . G T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 21946 chr11 120086918 . T C 13 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=49 PL:DP:SP:GT:GQ 44,6,0:2:0:1/1:49 | |
| 21947 chr11 120090015 . A T 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 21948 chr11 120098406 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 21949 chr11 120102542 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 21950 chr11 120137180 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21951 chr11 120150696 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21952 chr11 120173730 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21953 chr11 120175749 . A G,C 99 . DP=25;AF1=1;CI95=1,1;DP4=0,0,9,6;MQ=48 PL:DP:SP:GT:GQ 177,42,168,0,21,168:15:0:1/1:99 | |
| 21954 chr11 120180430 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 21955 chr11 120198647 . T C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 21956 chr11 120204007 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21957 chr11 120207004 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21958 chr11 120235602 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 21959 chr11 120248778 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 21960 chr11 120286996 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 21961 chr11 120307285 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21962 chr11 120309450 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21963 chr11 120323188 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 21964 chr11 120369783 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 21965 chr11 120380630 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 21966 chr11 120388493 . GCCCCTAGC G 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21967 chr11 120412884 . C G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 21968 chr11 120416352 . c cGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21969 chr11 120424530 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 21970 chr11 120424706 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 21971 chr11 120469096 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 21972 chr11 120469206 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 21973 chr11 120469876 . G A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 21974 chr11 120474533 . g gTTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21975 chr11 120482915 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 21976 chr11 120490855 . A G 11.3 . DP=5;AF1=0.5;CI95=0.5,0.5;DP4=1,1,0,2;MQ=43;PV4=1,0.12,1,1 PL:DP:SP:GT:GQ 41,0,67:4:0:0/1:44 | |
| 21977 chr11 120492140 . TA TAGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21978 chr11 120501255 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21979 chr11 120508118 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21980 chr11 120516717 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 21981 chr11 120518865 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 21982 chr11 120520937 . C G 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 21983 chr11 120543781 . T G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 21984 chr11 120562898 . G A 6.21 . DP=2;AF1=0.5012;CI95=0.5,0.5;DP4=0,1,1,0;MQ=42;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,23:2:0:0/1:26 | |
| 21985 chr11 120562917 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 21986 chr11 120565571 . CAA CAATAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21987 chr11 120579970 . C CACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21988 chr11 120580795 . C T 5.29 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 35,6,0:2:0:1/1:49 | |
| 21989 chr11 120592449 . t tA 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 21990 chr11 120597257 . ttt tTTCtt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 21991 chr11 120630834 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 21992 chr11 120638359 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 21993 chr11 120644358 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 21994 chr11 120645464 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 21995 chr11 120657152 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 21996 chr11 120657477 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 21997 chr11 120667853 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 21998 chr11 120687310 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 21999 chr11 120687320 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22000 chr11 120694574 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22001 chr11 120701809 . GGCCC G 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22002 chr11 120707383 . G A 25.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 57,6,0:2:0:1/1:49 | |
| 22003 chr11 120707644 . C T 3.01 . DP=3;AF1=0.4997;CI95=0.5,0.5;DP4=0,2,0,1;MQ=48;PV4=1,0.15,0,1 PL:DP:SP:GT:GQ 30,0,83:3:0:0/1:33 | |
| 22004 chr11 120721271 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22005 chr11 120724073 . ca cAGa 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 22006 chr11 120743583 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 22007 chr11 120752330 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22008 chr11 120783369 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 22009 chr11 120790862 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22010 chr11 120807263 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 22011 chr11 120823528 . A G 46 . DP=24;AF1=1;CI95=1,1;DP4=0,0,20,0;MQ=50 PL:DP:SP:GT:GQ 79,60,0:20:0:1/1:99 | |
| 22012 chr11 120831520 . T C 14.2 . DP=7;AF1=0.5;CI95=0.5,0.5;DP4=4,0,3,0;MQ=49;PV4=1,0.022,0.00079,1 PL:DP:SP:GT:GQ 44,0,115:7:0:0/1:47 | |
| 22013 chr11 120852961 . C A 99 . DP=53;AF1=1;CI95=1,1;DP4=0,1,10,34;MQ=47;PV4=1,0.27,0.0064,1 PL:DP:SP:GT:GQ 254,109,0:45:0:1/1:99 | |
| 22014 chr11 120874175 . T TGGGGTGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22015 chr11 120876888 . AGGGG AG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22016 chr11 120889615 . GCTT G 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22017 chr11 120911601 . TG TGGG 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 22018 chr11 120917057 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22019 chr11 120924896 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22020 chr11 120946139 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22021 chr11 120955177 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22022 chr11 120957898 . t tGGGGACAAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22023 chr11 120989335 . A G 3.01 . DP=54;AF1=0.4997;CI95=0.5,0.5;DP4=8,18,1,4;MQ=49;PV4=1,0.0028,8.6e-06,1 PL:DP:SP:GT:GQ 30,0,255:31:0:0/1:33 | |
| 22024 chr11 120996292 . A G 15.1 . DP=41;AF1=0.5;CI95=0.5,0.5;DP4=11,8,6,1;MQ=49;PV4=0.36,0.0016,0.00029,0.3 PL:DP:SP:GT:GQ 45,0,255:26:4:0/1:48 | |
| 22025 chr11 120998347 . G A 5.46 . DP=2;AF1=0.5002;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,30:2:0:0/1:32 | |
| 22026 chr11 121000784 . T C 69 . DP=49;AF1=0.5;CI95=0.5,0.5;DP4=8,13,4,7;MQ=49;PV4=1,0.0051,0.019,1 PL:DP:SP:GT:GQ 99,0,255:32:0:0/1:99 | |
| 22027 chr11 121006650 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 22028 chr11 121011823 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 22029 chr11 121016818 . G A 99 . DP=8;AF1=1;CI95=1,1;DP4=0,0,1,7;MQ=46 PL:DP:SP:GT:GQ 142,24,0:8:0:1/1:96 | |
| 22030 chr11 121016838 . C T 47.3 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=45 PL:DP:SP:GT:GQ 80,15,0:5:0:1/1:75 | |
| 22031 chr11 121023683 . A G 28 . DP=10;AF1=0.5;CI95=0.5,0.5;DP4=3,0,0,3;MQ=47;PV4=0.1,0.031,0.22,1 PL:DP:SP:GT:GQ 58,0,104:6:10:0/1:61 | |
| 22032 chr11 121023906 . G A 13 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47 PL:DP:SP:GT:GQ 44,6,0:2:0:1/1:49 | |
| 22033 chr11 121028437 . GCCCC GCCCCCC 7.57 . INDEL;DP=4;AF1=0.5336;CI95=0.5,1;DP4=1,0,1,0;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,9:2:0:0/1:12 | |
| 22034 chr11 121028601 . C T 16.1 . DP=20;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,3;MQ=48;PV4=0.25,0.004,0.16,1 PL:DP:SP:GT:GQ 46,0,38:4:0:0/1:40 | |
| 22035 chr11 121032978 . G A 36.1 . DP=46;AF1=0.508;CI95=0.5,0.5;DP4=1,1,0,8;MQ=49;PV4=0.2,0.21,0.26,1 PL:DP:SP:GT:GQ 66,0,15:10:0:0/1:18 | |
| 22036 chr11 121037530 . G A 17.6 . DP=30;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=49 PL:DP:SP:GT:GQ 50,12,0:4:0:1/1:72 | |
| 22037 chr11 121037554 . T C 43.3 . DP=18;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=48 PL:DP:SP:GT:GQ 76,15,0:5:0:1/1:75 | |
| 22038 chr11 121048383 . c cACCCTTT 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 22039 chr11 121049683 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22040 chr11 121058102 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22041 chr11 121058230 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 22042 chr11 121061986 . C T 9.31 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 22043 chr11 121062681 . TCA TCAGGCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22044 chr11 121067285 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22045 chr11 121080074 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 22046 chr11 121101208 . T A 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22047 chr11 121120573 . c cGCCAGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22048 chr11 121125945 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22049 chr11 121154247 . G C 8.65 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 22050 chr11 121156532 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 22051 chr11 121159906 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 22052 chr11 121181812 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22053 chr11 121192650 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 22054 chr11 121206577 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22055 chr11 121214684 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 22056 chr11 121215124 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 22057 chr11 121219400 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22058 chr11 121221376 . T TGGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22059 chr11 121221737 . C T 5.46 . DP=3;AF1=0.4999;CI95=0.5,0.5;DP4=2,0,1,0;MQ=45;PV4=1,0.35,0.33,1 PL:DP:SP:GT:GQ 34,0,74:3:0:0/1:37 | |
| 22060 chr11 121221745 . A G 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=43;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,37:2:0:0/1:37 | |
| 22061 chr11 121222244 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 22062 chr11 121237120 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 22063 chr11 121242166 . atgtg atg 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 22064 chr11 121243517 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22065 chr11 121266057 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22066 chr11 121270263 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 22067 chr11 121271758 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 22068 chr11 121278178 . t tCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22069 chr11 121302531 . T TACTC 7.35 . INDEL;DP=2;AF1=0.5008;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,25:2:0:0/1:28 | |
| 22070 chr11 121302990 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 22071 chr11 121310384 . tccaa t 5.8 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 22072 chr11 121338206 . A C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 22073 chr11 121347766 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 22074 chr11 121348801 . T C 18.1 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=5,1,1,2;MQ=48;PV4=0.23,0.099,0.0078,1 PL:DP:SP:GT:GQ 48,0,152:9:6:0/1:51 | |
| 22075 chr11 121349398 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 22076 chr11 121359284 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 22077 chr11 121393450 . G A 16.1 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=0,12,0,6;MQ=49;PV4=1,1.1e-08,0.014,0.24 PL:DP:SP:GT:GQ 46,0,225:18:0:0/1:49 | |
| 22078 chr11 121394300 . CAT CATCGAAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22079 chr11 121403229 . T C 80.4 . DP=37;AF1=0.5554;CI95=0.5,1;DP4=2,0,2,12;MQ=49;PV4=0.05,0.018,0.13,1 PL:DP:SP:GT:GQ 110,0,7:16:13:0/1:10 | |
| 22080 chr11 121403345 . T C 34.3 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=48 PL:DP:SP:GT:GQ 67,15,0:5:0:1/1:75 | |
| 22081 chr11 121409258 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22082 chr11 121424371 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22083 chr11 121425811 . A G 8.74 . DP=3;AF1=0.5128;CI95=0.5,0.5;DP4=1,0,2,0;MQ=46;PV4=1,1,1,0.35 PL:DP:SP:GT:GQ 38,0,13:3:0:0/1:16 | |
| 22084 chr11 121430965 . aa aATCAGAGGa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22085 chr11 121437819 . C G 99 . DP=24;AF1=1;CI95=1,1;DP4=0,1,1,20;MQ=48;PV4=1,1,0.2,1 PL:DP:SP:GT:GQ 159,48,0:22:0:1/1:99 | |
| 22086 chr11 121441013 . C A 4.77 . DP=28;AF1=0.4999;CI95=0.5,0.5;DP4=1,7,0,4;MQ=50;PV4=1,0.21,0.26,1 PL:DP:SP:GT:GQ 33,0,120:12:0:0/1:36 | |
| 22087 chr11 121441817 . c cGG 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 22088 chr11 121444793 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 22089 chr11 121456962 . C T 99 . DP=58;AF1=0.5;CI95=0.5,0.5;DP4=21,14,9,9;MQ=48;PV4=0.56,6.9e-05,1.3e-22,1 PL:DP:SP:GT:GQ 255,0,255:53:2:0/1:99 | |
| 22090 chr11 121461921 . C T 5.46 . DP=14;AF1=0.4999;CI95=0.5,0.5;DP4=0,4,0,3;MQ=48;PV4=1,0.15,0.12,1 PL:DP:SP:GT:GQ 34,0,64:7:0:0/1:37 | |
| 22091 chr11 121469100 . T TAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22092 chr11 121475798 . T A 99 . DP=15;AF1=1;CI95=1,1;DP4=0,0,10,1;MQ=45 PL:DP:SP:GT:GQ 152,33,0:11:0:1/1:99 | |
| 22093 chr11 121476439 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22094 chr11 121478337 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22095 chr11 121481970 . a aGC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,37:2:0:0/1:39 | |
| 22096 chr11 121490391 . A C 6.79 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 37,6,0:2:0:1/1:49 | |
| 22097 chr11 121490396 . T C 5.29 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49 PL:DP:SP:GT:GQ 35,6,0:2:0:1/1:49 | |
| 22098 chr11 121490724 . G GGCC 5.08 . INDEL;DP=7;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,53:3:0:0/1:44 | |
| 22099 chr11 121497420 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22100 chr11 121498281 . A C 4.13 . DP=14;AF1=0.4998;CI95=0.5,0.5;DP4=6,0,0,3;MQ=48;PV4=0.012,0.021,1,1 PL:DP:SP:GT:GQ 32,0,156:9:19:0/1:35 | |
| 22101 chr11 121519083 . g gCCCC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 22102 chr11 121547009 . t tCTAATCGAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22103 chr11 121550710 . t tAAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22104 chr11 121561463 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22105 chr11 121574911 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22106 chr11 121589027 . CTA CTAGAGTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22107 chr11 121630235 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22108 chr11 121634023 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 22109 chr11 121651580 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22110 chr11 121663086 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22111 chr11 121663310 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 22112 chr11 121674220 . AGC A 7.35 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 22113 chr11 121679317 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 22114 chr11 121711970 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22115 chr11 121713607 . A T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 22116 chr11 121719148 . A T 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,40:2:0:0/1:34 | |
| 22117 chr11 121742667 . A C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 22118 chr11 121751335 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22119 chr11 121764705 . AAG AAGGAG 3.25 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=3,0,0,1;MQ=50;PV4=0.25,0.002,1,1 PL:DP:SP:GT:GQ 38,0,114:4:0:0/1:41 | |
| 22120 chr11 121765736 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 22121 chr11 121786080 . ACC A 4.42 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 22122 chr11 121818376 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22123 chr11 121833668 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 22124 chr11 121850557 . G C 4.77 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22125 chr11 121851266 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22126 chr11 121857726 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 22127 chr11 121858440 . A T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 22128 chr11 121863734 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22129 chr11 121895963 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22130 chr11 121895969 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22131 chr11 121913577 . A G 20.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=44 PL:DP:SP:GT:GQ 52,6,0:2:0:1/1:49 | |
| 22132 chr11 121915571 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22133 chr11 121921256 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 22134 chr11 121929027 . G A 8.65 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 22135 chr11 121935148 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 22136 chr11 122007043 . C A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22137 chr11 122014622 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 22138 chr11 122018283 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22139 chr11 122023636 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22140 chr11 122041206 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22141 chr11 122047721 . GAA G 9.05 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 22142 chr11 122064231 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22143 chr11 122083775 . G T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22144 chr11 122092594 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22145 chr11 122096381 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22146 chr11 122113047 . c cGNNNNNNNNNN 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22147 chr11 122135806 . T TGAAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22148 chr11 122158583 . AG AGCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22149 chr11 122176197 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 22150 chr11 122177418 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 22151 chr11 122201245 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22152 chr11 122240233 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22153 chr11 122258832 . c cTGA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 22154 chr11 122285737 . t tGGA 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 22155 chr11 122323221 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22156 chr11 122357740 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22157 chr11 122364230 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22158 chr11 122372134 . G A 30.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=43 PL:DP:SP:GT:GQ 62,6,0:2:0:1/1:49 | |
| 22159 chr11 122372915 . GT GTGACGCTTCT 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22160 chr11 122426443 . ctg cTGGtg 7.35 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 22161 chr11 122434609 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22162 chr11 122446843 . G T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 22163 chr11 122458756 . t tACCCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22164 chr11 122459979 . a aCGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22165 chr11 122460744 . C CAGGTGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22166 chr11 122485770 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22167 chr11 122485957 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22168 chr11 122489873 . T A 7.8 . DP=4;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 22169 chr11 122515161 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22170 chr11 122525783 . T A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 22171 chr11 122566227 . GG GGCTAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22172 chr11 122580549 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22173 chr11 122586563 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 22174 chr11 122593099 . TC TCCCAC 12.7 . INDEL;DP=9;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22175 chr11 122605836 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 22176 chr11 122612077 . A AGAGCTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22177 chr11 122619328 . A C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 22178 chr11 122631348 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22179 chr11 122633989 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22180 chr11 122650172 . C G 49.5 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=47 PL:DP:SP:GT:GQ 82,12,0:4:0:1/1:72 | |
| 22181 chr11 122655623 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22182 chr11 122665346 . C CAGA 7.35 . INDEL;DP=7;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,40:2:0:0/1:42 | |
| 22183 chr11 122665437 . A G 99 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=3,12,2,5;MQ=48;PV4=1,0.011,6e-06,1 PL:DP:SP:GT:GQ 154,0,255:22:0:0/1:99 | |
| 22184 chr11 122671944 . T G 13.2 . DP=45;AF1=0.5;CI95=0.5,0.5;DP4=13,5,0,7;MQ=49;PV4=0.0016,0.00076,2.6e-05,0.37 PL:DP:SP:GT:GQ 43,0,255:25:28:0/1:46 | |
| 22185 chr11 122692276 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 22186 chr11 122693917 . a aGAGACT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22187 chr11 122704857 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22188 chr11 122714248 . GA GAGAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22189 chr11 122722644 . TT TTAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22190 chr11 122724601 . G C 3.01 . DP=8;AF1=0.4998;CI95=0.5,0.5;DP4=2,0,1,0;MQ=47;PV4=1,1,0.042,0.35 PL:DP:SP:GT:GQ 30,0,34:3:0:0/1:32 | |
| 22191 chr11 122742050 . T C 99 . DP=32;AF1=0.5;CI95=0.5,0.5;DP4=2,15,1,11;MQ=48;PV4=1,3e-05,5.2e-07,1 PL:DP:SP:GT:GQ 144,0,255:29:0:0/1:99 | |
| 22192 chr11 122750745 . t tTACAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22193 chr11 122775227 . T C 34.1 . DP=12;AF1=1;CI95=0.5,1;DP4=0,0,0,6;MQ=50 PL:DP:SP:GT:GQ 67,18,0:6:0:1/1:90 | |
| 22194 chr11 122783202 . A ACG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22195 chr11 122795700 . A C 35 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=2,2,0,5;MQ=48;PV4=0.17,0.27,0.0055,1 PL:DP:SP:GT:GQ 65,0,79:9:8:0/1:68 | |
| 22196 chr11 122832151 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22197 chr11 122845426 . T TGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22198 chr11 122877181 . TGT TGTTTTCCGT 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 22199 chr11 122893668 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 22200 chr11 122899182 . t tCATCAACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22201 chr11 122901470 . GC GCC 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 22202 chr11 122906650 . T C 33 . DP=13;AF1=0.5;CI95=0.5,0.5;DP4=3,3,3,2;MQ=37;PV4=1,0.15,0.024,0.38 PL:DP:SP:GT:GQ 63,0,149:11:0:0/1:66 | |
| 22203 chr11 122906782 . C T 6.79 . DP=9;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=37 PL:DP:SP:GT:GQ 37,6,0:2:0:1/1:49 | |
| 22204 chr11 122906847 . C T 6.98 . DP=11;AF1=0.4999;CI95=0.5,0.5;DP4=2,4,1,2;MQ=49;PV4=1,7.5e-07,0.022,0.35 PL:DP:SP:GT:GQ 36,0,223:9:0:0/1:39 | |
| 22205 chr11 122917784 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22206 chr11 122921946 . AAGGG A 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22207 chr11 122930108 . tt tTGt 80.5 . INDEL;DP=7;AF1=0.5;CI95=0.5,0.5;DP4=3,0,4,0;MQ=50;PV4=1,1,1,0.11 PL:DP:SP:GT:GQ 118,0,107:7:0:0/1:99 | |
| 22208 chr11 122931528 . AACAC AAC 38.5 . INDEL;DP=22;AF1=0.5;CI95=0.5,0.5;DP4=0,16,0,4;MQ=50;PV4=1,0.044,1,1 PL:DP:SP:GT:GQ 76,0,230:20:0:0/1:79 | |
| 22209 chr11 122944324 . C T 22 . DP=23;AF1=0.5;CI95=0.5,0.5;DP4=1,5,0,4;MQ=47;PV4=1,0.22,0.0017,1 PL:DP:SP:GT:GQ 52,0,120:10:0:0/1:55 | |
| 22210 chr11 122964751 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22211 chr11 122968800 . A T 7.59 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=50 PL:DP:SP:GT:GQ 38,6,0:2:0:1/1:49 | |
| 22212 chr11 122988510 . TT TTGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22213 chr11 123037579 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22214 chr11 123042676 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 22215 chr11 123062992 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22216 chr11 123066006 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22217 chr11 123066743 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 22218 chr11 123071972 . taaca t 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=1,1,0,1;MQ=50;PV4=1,0,1,0.33 PL:DP:SP:GT:GQ 41,0,91:3:0:0/1:44 | |
| 22219 chr11 123073307 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22220 chr11 123079053 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 22221 chr11 123079898 . GA GATCA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22222 chr11 123124676 . t tTG 3.25 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 22223 chr11 123126808 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 22224 chr11 123136632 . G C 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 22225 chr11 123137245 . ga gACAa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22226 chr11 123169480 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 22227 chr11 123169748 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 22228 chr11 123187741 . C T 9.31 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 22229 chr11 123188595 . T G 4.77 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22230 chr11 123193404 . T G 6.79 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=49 PL:DP:SP:GT:GQ 37,6,0:2:0:1/1:49 | |
| 22231 chr11 123215663 . C A 4.77 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,39:2:0:0/1:35 | |
| 22232 chr11 123234210 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 22233 chr11 123245105 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 22234 chr11 123259611 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 22235 chr11 123288978 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22236 chr11 123291015 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22237 chr11 123317189 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=46 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22238 chr11 123328258 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22239 chr11 123345117 . G A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 22240 chr11 123354369 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22241 chr11 123354854 . t tTTGAAAAGGGA 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 22242 chr11 123358047 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 22243 chr11 123362160 . T A 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,34:2:0:0/1:32 | |
| 22244 chr11 123392103 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22245 chr11 123404041 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22246 chr11 123409783 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22247 chr11 123415156 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22248 chr11 123415161 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22249 chr11 123417621 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22250 chr11 123418057 . TG TGAACG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22251 chr11 123440880 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22252 chr11 123449873 . C CTAGTACTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22253 chr11 123460881 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22254 chr11 123461581 . C T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 22255 chr11 123462867 . C A 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22256 chr11 123462885 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22257 chr11 123468969 . AT ATT 19.5 . INDEL;DP=13;AF1=0.502;CI95=0.5,0.5;DP4=0,1,1,1;MQ=50;PV4=1,1,1,0.33 PL:DP:SP:GT:GQ 57,0,21:3:0:0/1:24 | |
| 22258 chr11 123469041 . T TAC 3.25 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=1,2,1,0;MQ=50;PV4=1,1,1,0.22 PL:DP:SP:GT:GQ 38,0,122:4:0:0/1:41 | |
| 22259 chr11 123469528 . C CAGTGCCA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22260 chr11 123469829 . T A 13.2 . DP=10;AF1=0.5;CI95=0.5,0.5;DP4=2,2,0,3;MQ=48;PV4=0.43,0.021,0.075,1 PL:DP:SP:GT:GQ 43,0,140:7:4:0/1:46 | |
| 22261 chr11 123470174 . C T 99 . DP=11;AF1=0.9999;CI95=0.5,1;DP4=0,1,0,9;MQ=43;PV4=1,1,0.47,0.3 PL:DP:SP:GT:GQ 140,3,0:10:0:1/1:41 | |
| 22262 chr11 123475037 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22263 chr11 123485954 . T C 3.01 . DP=3;AF1=0.4997;CI95=0.5,0.5;DP4=2,0,1,0;MQ=46;PV4=1,0.32,0.12,0.3 PL:DP:SP:GT:GQ 30,0,71:3:0:0/1:33 | |
| 22264 chr11 123489502 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22265 chr11 123494841 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 22266 chr11 123495552 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 22267 chr11 123517638 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22268 chr11 123529822 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22269 chr11 123596703 . A C 56 . DP=21;AF1=0.5;CI95=0.5,0.5;DP4=13,1,6,0;MQ=49;PV4=1,2.6e-05,7.3e-07,1 PL:DP:SP:GT:GQ 86,0,255:20:0:0/1:89 | |
| 22270 chr11 123597194 . G A 99 . DP=62;AF1=0.5;CI95=0.5,0.5;DP4=12,15,21,7;MQ=50;PV4=0.029,4.7e-12,0.022,1 PL:DP:SP:GT:GQ 129,0,255:55:15:0/1:99 | |
| 22271 chr11 123599020 . G A 16.1 . DP=30;AF1=0.5;CI95=0.5,0.5;DP4=1,21,0,4;MQ=49;PV4=1,0.019,1.2e-28,1 PL:DP:SP:GT:GQ 46,0,255:26:0:0/1:49 | |
| 22272 chr11 123599044 . T C 14.2 . DP=28;AF1=0.5;CI95=0.5,0.5;DP4=0,13,0,13;MQ=49;PV4=1,3e-16,1,1 PL:DP:SP:GT:GQ 44,0,220:26:0:0/1:47 | |
| 22273 chr11 123600247 . GGAGAAATGTCCGAGAAATGTCC GGAGAAATGTCC 52.2 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=50 PL:DP:SP:GT:GQ 91,6,0:2:0:1/1:49 | |
| 22274 chr11 123600475 . A G 99 . DP=34;AF1=1;CI95=1,1;DP4=0,0,10,15;MQ=48 PL:DP:SP:GT:GQ 255,75,0:25:0:1/1:99 | |
| 22275 chr11 123603076 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22276 chr11 123609257 . GCTCTC GCTCTCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22277 chr11 123622524 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22278 chr11 123624253 . A G 23 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=5,0,4,0;MQ=49;PV4=1,2.1e-05,0.068,1 PL:DP:SP:GT:GQ 53,0,156:9:0:0/1:56 | |
| 22279 chr11 123648919 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22280 chr11 123657267 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22281 chr11 123676388 . G A 33 . DP=21;AF1=0.5;CI95=0.5,0.5;DP4=4,9,4,4;MQ=50;PV4=0.65,4.9e-10,0.013,1 PL:DP:SP:GT:GQ 63,0,255:21:2:0/1:66 | |
| 22282 chr11 123683274 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22283 chr11 123711602 . T C 14.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=40 PL:DP:SP:GT:GQ 46,6,0:2:0:1/1:49 | |
| 22284 chr11 123711702 . T A 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 22285 chr11 123722272 . gggga g 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22286 chr11 123732814 . T G 3.58 . DP=6;AF1=0.5078;CI95=0.5,0.5;DP4=0,1,0,2;MQ=49;PV4=1,0.38,0.33,1 PL:DP:SP:GT:GQ 31,0,15:3:0:0/1:18 | |
| 22287 chr11 123753132 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22288 chr11 123753937 . A G 99 . DP=59;AF1=1;CI95=1,1;DP4=0,0,21,31;MQ=46 PL:DP:SP:GT:GQ 255,157,0:52:0:1/1:99 | |
| 22289 chr11 123754844 . T C 5.44 . DP=39;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=50 PL:DP:SP:GT:GQ 36,9,0:3:0:1/1:63 | |
| 22290 chr11 123767973 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22291 chr11 123774575 . CT CTGTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22292 chr11 123774891 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 22293 chr11 123777497 . G A 99 . DP=37;AF1=1;CI95=1,1;DP4=1,1,11,16;MQ=46;PV4=1,1,0.00094,1 PL:DP:SP:GT:GQ 255,42,0:29:0:1/1:99 | |
| 22294 chr11 123810025 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22295 chr11 123811209 . A G 4.77 . DP=26;AF1=0.4999;CI95=0.5,0.5;DP4=3,8,0,3;MQ=49;PV4=1,0.024,0.00065,1 PL:DP:SP:GT:GQ 33,0,255:14:0:0/1:36 | |
| 22296 chr11 123840414 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22297 chr11 123841716 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22298 chr11 123864216 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 22299 chr11 123865664 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22300 chr11 123870674 . T G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 22301 chr11 123871571 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22302 chr11 123884890 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22303 chr11 123886681 . A G 53 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=4,3,4,1;MQ=47;PV4=0.58,8.1e-05,0.033,1 PL:DP:SP:GT:GQ 83,0,236:12:2:0/1:86 | |
| 22304 chr11 123887012 . GTATT GT 5.08 . INDEL;DP=6;AF1=0.5;CI95=0.5,0.5;DP4=1,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,65:3:0:0/1:44 | |
| 22305 chr11 123893745 . C T 65 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=5,1,6,1;MQ=47;PV4=1,1.5e-05,0.16,1 PL:DP:SP:GT:GQ 95,0,182:13:0:0/1:98 | |
| 22306 chr11 123900439 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 22307 chr11 123900866 . T C 5.46 . DP=20;AF1=0.4999;CI95=0.5,0.5;DP4=4,8,3,0;MQ=49;PV4=0.077,0.0052,4.5e-07,1 PL:DP:SP:GT:GQ 34,0,255:15:11:0/1:37 | |
| 22308 chr11 123909099 . G T 99 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=8,2,5,5;MQ=47;PV4=0.35,0.017,1.5e-05,1 PL:DP:SP:GT:GQ 185,0,221:20:5:0/1:99 | |
| 22309 chr11 123909302 . G C 23 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=4,5,1,2;MQ=49;PV4=1,0.032,4.9e-05,1 PL:DP:SP:GT:GQ 53,0,255:12:0:0/1:56 | |
| 22310 chr11 123909695 . G C 3.41 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 32,6,0:2:0:1/1:49 | |
| 22311 chr11 123914636 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 22312 chr11 123930233 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 22313 chr11 123953452 . g gTTGCAT 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22314 chr11 123969058 . T G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 22315 chr11 123986643 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22316 chr11 123988195 . T G 35.1 . DP=22;AF1=0.5064;CI95=0.5,0.5;DP4=2,0,5,0;MQ=48;PV4=1,1,0.18,1 PL:DP:SP:GT:GQ 65,0,16:7:0:0/1:19 | |
| 22317 chr11 123988341 . A G 99 . DP=29;AF1=0.5;CI95=0.5,0.5;DP4=6,8,3,11;MQ=49;PV4=0.42,1.9e-08,0.0014,1 PL:DP:SP:GT:GQ 136,0,255:28:4:0/1:99 | |
| 22318 chr11 123989828 . TAA T,TAAAA 13.4 . INDEL;DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=50 PL:DP:SP:GT:GQ 93,47,51,41,0,48:3:0:1/1:49 | |
| 22319 chr11 123992603 . T C 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 22320 chr11 124004569 . C CG 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 22321 chr11 124007771 . ATG ATTG 3.8 . INDEL;DP=25;AF1=0.5;CI95=0.5,0.5;DP4=10,2,1,3;MQ=50;PV4=0.063,1,1,0.021 PL:DP:SP:GT:GQ 39,0,142:16:12:0/1:42 | |
| 22322 chr11 124007921 . CC CCCGGC 3.25 . INDEL;DP=16;AF1=0.5;CI95=0.5,0.5;DP4=3,0,0,1;MQ=49;PV4=0.25,1,1,1 PL:DP:SP:GT:GQ 38,0,48:4:0:0/1:41 | |
| 22323 chr11 124008004 . TA TAACCAAA 3.25 . INDEL;DP=9;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,1;MQ=48;PV4=1,1,1,0.064 PL:DP:SP:GT:GQ 38,0,62:4:0:0/1:41 | |
| 22324 chr11 124014104 . c cCTCATTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22325 chr11 124015994 . C T 99 . DP=43;AF1=0.5;CI95=0.5,0.5;DP4=8,4,6,18;MQ=49;PV4=0.029,3.1e-10,1,1 PL:DP:SP:GT:GQ 142,0,243:36:15:0/1:99 | |
| 22326 chr11 124038377 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 22327 chr11 124056809 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22328 chr11 124079100 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22329 chr11 124079608 . a aG 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 22330 chr11 124101675 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22331 chr11 124112633 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 22332 chr11 124121378 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 22333 chr11 124182034 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 22334 chr11 124189729 . C T 99 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=0,5,2,6;MQ=46;PV4=0.49,1,0.0001,1 PL:DP:SP:GT:GQ 199,0,104:13:3:0/1:99 | |
| 22335 chr11 124209433 . A G 3.02 . DP=4;AF1=0.5017;CI95=0.5,0.5;DP4=0,1,0,3;MQ=43;PV4=1,0,0.32,1 PL:DP:SP:GT:GQ 30,0,21:4:0:0/1:23 | |
| 22336 chr11 124216393 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 22337 chr11 124228623 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22338 chr11 124229613 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22339 chr11 124237922 . at aTt 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 22340 chr11 124246541 . C G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 22341 chr11 124247361 . C T 43.5 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=45 PL:DP:SP:GT:GQ 76,12,0:4:0:1/1:72 | |
| 22342 chr11 124252963 . A T 4.13 . DP=12;AF1=0.4998;CI95=0.5,0.5;DP4=5,2,0,3;MQ=48;PV4=0.17,0.046,0.012,0.26 PL:DP:SP:GT:GQ 32,0,183:10:8:0/1:35 | |
| 22343 chr11 124253147 . A G 21 . DP=23;AF1=0.5;CI95=0.5,0.5;DP4=2,5,1,3;MQ=46;PV4=1,0.063,0.003,0.06 PL:DP:SP:GT:GQ 51,0,174:11:0:0/1:54 | |
| 22344 chr11 124253181 . T C 88.3 . DP=10;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=40 PL:DP:SP:GT:GQ 121,15,0:5:0:1/1:75 | |
| 22345 chr11 124260984 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 22346 chr11 124266906 . C T 19.1 . DP=7;AF1=0.508;CI95=0.5,0.5;DP4=2,0,3,0;MQ=31;PV4=1,0.035,1,1 PL:DP:SP:GT:GQ 49,0,15:5:0:0/1:18 | |
| 22347 chr11 124281468 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22348 chr11 124294236 . A G 9.52 . DP=21;AF1=0.5;CI95=0.5,0.5;DP4=7,6,4,3;MQ=50;PV4=1,8.5e-05,1,1 PL:DP:SP:GT:GQ 39,0,255:20:0:0/1:42 | |
| 22349 chr11 124309380 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22350 chr11 124315724 . A ACAACC 8.19 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=49 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 22351 chr11 124317875 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22352 chr11 124332707 . T A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 22353 chr11 124334279 . A AGCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22354 chr11 124335222 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22355 chr11 124339382 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 22356 chr11 124339600 . T TCAAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22357 chr11 124349249 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 22358 chr11 124353595 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22359 chr11 124413087 . G A 9.52 . DP=23;AF1=0.5;CI95=0.5,0.5;DP4=0,6,5,0;MQ=45;PV4=0.0022,0.02,1,0.099 PL:DP:SP:GT:GQ 39,0,104:11:27:0/1:42 | |
| 22360 chr11 124413261 . A T 20 . DP=13;AF1=0.5;CI95=0.5,0.5;DP4=1,1,1,3;MQ=48;PV4=1,0.12,0.031,1 PL:DP:SP:GT:GQ 50,0,54:6:0:0/1:52 | |
| 22361 chr11 124428141 . gg gGAGGGAGAg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22362 chr11 124437830 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22363 chr11 124440923 . C T 76 . DP=33;AF1=0.5;CI95=0.5,0.5;DP4=10,11,2,7;MQ=49;PV4=0.25,7.6e-09,1.5e-09,0.43 PL:DP:SP:GT:GQ 106,0,255:30:6:0/1:99 | |
| 22364 chr11 124481692 . A G 40 . DP=27;AF1=0.5;CI95=0.5,0.5;DP4=0,13,0,10;MQ=49;PV4=1,6.8e-07,0.00015,1 PL:DP:SP:GT:GQ 70,0,222:23:0:0/1:73 | |
| 22365 chr11 124491753 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22366 chr11 124502223 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 22367 chr11 124508345 . A G 12.3 . DP=4;AF1=0.5;CI95=0.5,0.5;DP4=2,0,2,0;MQ=48;PV4=1,0.00043,0.0061,1 PL:DP:SP:GT:GQ 42,0,80:4:0:0/1:45 | |
| 22368 chr11 124528885 . G GCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22369 chr11 124539446 . G T 99 . DP=31;AF1=0.5;CI95=0.5,0.5;DP4=0,19,0,10;MQ=48;PV4=1,8.2e-06,2.5e-09,1 PL:DP:SP:GT:GQ 134,0,242:29:0:0/1:99 | |
| 22370 chr11 124542121 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22371 chr11 124545110 . C T 49 . DP=21;AF1=0.5;CI95=0.5,0.5;DP4=9,0,6,0;MQ=48;PV4=1,0.006,0.0091,1 PL:DP:SP:GT:GQ 79,0,187:15:0:0/1:82 | |
| 22372 chr11 124545288 . T C 40 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=5,1,0,6;MQ=49;PV4=0.015,0.0012,0.002,1 PL:DP:SP:GT:GQ 70,0,169:12:18:0/1:73 | |
| 22373 chr11 124565030 . T A 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,42:2:0:0/1:34 | |
| 22374 chr11 124566094 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22375 chr11 124580561 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22376 chr11 124594893 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 22377 chr11 124615938 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22378 chr11 124619377 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22379 chr11 124620587 . C T 52.1 . DP=17;AF1=1;CI95=0.5,1;DP4=0,0,6,0;MQ=47 PL:DP:SP:GT:GQ 85,18,0:6:0:1/1:90 | |
| 22380 chr11 124620853 . T G 28 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=0,6,0,6;MQ=48;PV4=1,0.16,0.031,1 PL:DP:SP:GT:GQ 58,0,81:12:0:0/1:61 | |
| 22381 chr11 124620859 . C A 18.2 . DP=16;AF1=0.5207;CI95=0.5,1;DP4=0,1,0,4;MQ=47;PV4=1,0.029,0.47,1 PL:DP:SP:GT:GQ 48,0,11:5:0:0/1:14 | |
| 22382 chr11 124624059 . GT GTCTT 5.08 . INDEL;DP=6;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,52:3:0:0/1:44 | |
| 22383 chr11 124624083 . G A 61.5 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=45 PL:DP:SP:GT:GQ 94,12,0:4:0:1/1:72 | |
| 22384 chr11 124624121 . G A 4.13 . DP=8;AF1=0.4998;CI95=0.5,0.5;DP4=0,2,2,0;MQ=48;PV4=0.33,0.21,0.18,0.15 PL:DP:SP:GT:GQ 32,0,58:4:5:0/1:35 | |
| 22385 chr11 124626117 . A C 6.98 . DP=12;AF1=0.4999;CI95=0.5,0.5;DP4=1,1,2,0;MQ=47;PV4=1,0.22,0.0041,1 PL:DP:SP:GT:GQ 36,0,49:4:0:0/1:39 | |
| 22386 chr11 124626297 . ACCC AC 6.56 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 22387 chr11 124648071 . C CGTCTCGT 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 22388 chr11 124686502 . C T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 22389 chr11 124726319 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 22390 chr11 124731819 . CT CTACTGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22391 chr11 124736672 . G C 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,40:2:0:0/1:34 | |
| 22392 chr11 124737241 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 22393 chr11 124750121 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22394 chr11 124762704 . AGGG AG 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 22395 chr11 124763654 . TCCAGAGGC TCCAGAGGCCAGAGGC 99 . INDEL;DP=29;AF1=0.5;CI95=0.5,0.5;DP4=1,10,1,6;MQ=50;PV4=1,0.086,1,1 PL:DP:SP:GT:GQ 207,0,255:18:0:0/1:99 | |
| 22396 chr11 124765432 . G A 23 . DP=7;AF1=0.5;CI95=0.5,0.5;DP4=0,4,1,2;MQ=48;PV4=0.43,7.3e-06,0.0018,0.39 PL:DP:SP:GT:GQ 53,0,136:7:0:0/1:56 | |
| 22397 chr11 124766128 . A G 99 . DP=39;AF1=0.5;CI95=0.5,0.5;DP4=9,12,10,7;MQ=48;PV4=0.51,2.3e-16,0.0031,0.33 PL:DP:SP:GT:GQ 192,0,255:38:3:0/1:99 | |
| 22398 chr11 124789755 . T C 99 . DP=51;AF1=0.5;CI95=0.5,0.5;DP4=9,16,3,12;MQ=48;PV4=0.48,0.13,6.6e-25,1 PL:DP:SP:GT:GQ 226,0,255:40:3:0/1:99 | |
| 22399 chr11 124793509 . G GA 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 22400 chr11 124793682 . T C 99 . DP=37;AF1=0.5;CI95=0.5,0.5;DP4=3,12,3,9;MQ=48;PV4=1,0.034,8e-07,1 PL:DP:SP:GT:GQ 157,0,255:27:0:0/1:99 | |
| 22401 chr11 124814008 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22402 chr11 124818260 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22403 chr11 124829657 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22404 chr11 124840051 . A G 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 22405 chr11 124842745 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22406 chr11 124856024 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 22407 chr11 124860610 . G C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 22408 chr11 124886521 . G C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 22409 chr11 124889522 . T TGAGTCACC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22410 chr11 124912675 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22411 chr11 124928048 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22412 chr11 124932019 . TG TGAGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22413 chr11 124933681 . T TAC 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 22414 chr11 124936304 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 22415 chr11 124947149 . G A 60 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=1,4,3,3;MQ=48;PV4=0.55,6.9e-06,0.01,0.17 PL:DP:SP:GT:GQ 90,0,174:11:3:0/1:93 | |
| 22416 chr11 124947396 . A G 99 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=1,7,2,10;MQ=46;PV4=1,6.2e-05,6.8e-18,1 PL:DP:SP:GT:GQ 235,0,217:20:0:0/1:99 | |
| 22417 chr11 124952385 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 22418 chr11 124954282 . A G 51 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=0,5,0,7;MQ=48;PV4=1,6.5e-06,0.27,0.47 PL:DP:SP:GT:GQ 81,0,147:12:0:0/1:84 | |
| 22419 chr11 124955977 . C T 76 . DP=31;AF1=0.5;CI95=0.5,0.5;DP4=10,9,2,7;MQ=49;PV4=0.22,8.6e-08,2.8e-05,1 PL:DP:SP:GT:GQ 106,0,255:28:7:0/1:99 | |
| 22420 chr11 124961323 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22421 chr11 124973864 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 22422 chr11 124987553 . ATCTT AT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22423 chr11 124995436 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22424 chr11 125005525 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 22425 chr11 125031112 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22426 chr11 125046134 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 22427 chr11 125069960 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22428 chr11 125081095 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22429 chr11 125098095 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22430 chr11 125101610 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22431 chr11 125120784 . C T 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,37:2:0:0/1:37 | |
| 22432 chr11 125123599 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 22433 chr11 125126070 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22434 chr11 125128961 . C G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 22435 chr11 125136873 . T TAA 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 22436 chr11 125137690 . A G 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,1;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 22437 chr11 125140114 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22438 chr11 125140126 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22439 chr11 125204062 . TTC TTCACAGTC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 22440 chr11 125207608 . tc tCGGGACAc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22441 chr11 125208715 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22442 chr11 125209074 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 22443 chr11 125212737 . AGGG AG 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 22444 chr11 125216638 . A C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 22445 chr11 125219088 . C CACTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22446 chr11 125226954 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22447 chr11 125233238 . C T 3.06 . DP=2;AF1=0.5099;CI95=0.5,0.5;DP4=0,1,1,0;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,14:2:0:0/1:17 | |
| 22448 chr11 125239067 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22449 chr11 125243215 . A G 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22450 chr11 125245038 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22451 chr11 125253967 . A T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 22452 chr11 125267266 . A G 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,36:2:0:0/1:36 | |
| 22453 chr11 125273547 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 22454 chr11 125277721 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22455 chr11 125278691 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22456 chr11 125278705 . TT TTCCCGT 7.39 . INDEL;DP=2;AF1=0.5063;CI95=0.5,0.5;DP4=1,0,0,1;MQ=48;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,16:2:0:0/1:19 | |
| 22457 chr11 125281576 . C T 7.81 . DP=2;AF1=0.5019;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,21:2:0:0/1:24 | |
| 22458 chr11 125287693 . A C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 22459 chr11 125291265 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22460 chr11 125294641 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 22461 chr11 125298871 . A G 99 . DP=20;AF1=1;CI95=1,1;DP4=0,0,16,1;MQ=48 PL:DP:SP:GT:GQ 164,51,0:17:0:1/1:99 | |
| 22462 chr11 125311158 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22463 chr11 125318590 . T TCCCTATG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22464 chr11 125326026 . C T 35 . DP=21;AF1=0.5;CI95=0.5,0.5;DP4=2,7,0,8;MQ=50;PV4=0.47,1.3e-05,0.074,1 PL:DP:SP:GT:GQ 65,0,247:17:3:0/1:68 | |
| 22465 chr11 125337001 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 22466 chr11 125339012 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 22467 chr11 125362199 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22468 chr11 125376604 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22469 chr11 125383153 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22470 chr11 125383176 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22471 chr11 125399576 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 22472 chr11 125401609 . T G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 22473 chr11 125402668 . ct cTGATCAt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22474 chr11 125417829 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 22475 chr11 125424756 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22476 chr11 125430545 . a aGCAGGGC 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 22477 chr11 125449749 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22478 chr11 125471069 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 22479 chr11 125472042 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22480 chr11 125473996 . G A 36 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=3,0,6,0;MQ=49;PV4=1,0.011,0.099,0.44 PL:DP:SP:GT:GQ 66,0,82:9:0:0/1:69 | |
| 22481 chr11 125474183 . T TCATGAG 3.25 . INDEL;DP=7;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,52:4:0:0/1:41 | |
| 22482 chr11 125479363 . G A 99 . DP=50;AF1=1;CI95=1,1;DP4=1,1,22,18;MQ=48;PV4=1,0.3,0.065,1 PL:DP:SP:GT:GQ 255,70,0:42:0:1/1:99 | |
| 22483 chr11 125483940 . CAG C 78.5 . INDEL;DP=20;AF1=0.5;CI95=0.5,0.5;DP4=11,2,5,0;MQ=50;PV4=1,0.045,1,0.35 PL:DP:SP:GT:GQ 116,0,255:18:0:0/1:99 | |
| 22484 chr11 125485679 . c cGGGCTGTA 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 22485 chr11 125490616 . C A 73 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=4,0,12,0;MQ=48;PV4=1,0.002,0.16,0.13 PL:DP:SP:GT:GQ 103,0,88:16:0:0/1:91 | |
| 22486 chr11 125505563 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 22487 chr11 125513696 . G GAGTAATATATATGCGC 99 . INDEL;DP=18;AF1=1;CI95=1,1;DP4=0,0,13,3;MQ=50 PL:DP:SP:GT:GQ 255,48,0:16:0:1/1:99 | |
| 22488 chr11 125513931 . G A 13.2 . DP=10;AF1=0.5;CI95=0.5,0.5;DP4=4,0,3,0;MQ=46;PV4=1,0.2,0.031,1 PL:DP:SP:GT:GQ 43,0,90:7:0:0/1:46 | |
| 22489 chr11 125514214 . GTCT GACTTATGTCT 7.35 . INDEL;DP=6;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,42:2:0:0/1:43 | |
| 22490 chr11 125525195 . A G 27 . DP=14;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=48 PL:DP:SP:GT:GQ 59,9,0:3:0:1/1:63 | |
| 22491 chr11 125534881 . t tAAA 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 22492 chr11 125546426 . C A 3.54 . DP=28;AF1=0.4998;CI95=0.5,0.5;DP4=0,16,0,6;MQ=49;PV4=1,0.0016,0.0035,1 PL:DP:SP:GT:GQ 31,0,217:22:0:0/1:34 | |
| 22493 chr11 125547660 . C G 67 . DP=28;AF1=0.5;CI95=0.5,0.5;DP4=16,0,8,0;MQ=49;PV4=1,1e-05,7.3e-07,0.41 PL:DP:SP:GT:GQ 97,0,235:24:0:0/1:99 | |
| 22494 chr11 125605316 . g gTTCTCAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22495 chr11 125607431 . G C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 22496 chr11 125617376 . CTTT CTT 30.4 . INDEL;DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=50 PL:DP:SP:GT:GQ 70,9,0:3:0:1/1:63 | |
| 22497 chr11 125617525 . A C 17.1 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=5,0,4,0;MQ=49;PV4=1,0.056,0.045,1 PL:DP:SP:GT:GQ 47,0,73:9:0:0/1:50 | |
| 22498 chr11 125617610 . A G 8.61 . DP=41;AF1=1;CI95=0.5,1;DP4=0,0,1,2;MQ=50 PL:DP:SP:GT:GQ 40,9,0:3:0:1/1:63 | |
| 22499 chr11 125618709 . Tcacacacacacacacacacac TCAcacacacacacacacacacac 5.44 . INDEL;DP=12;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=35 PL:DP:SP:GT:GQ 44,12,0:4:0:1/1:72 | |
| 22500 chr11 125618731 . T C 13 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47 PL:DP:SP:GT:GQ 44,6,0:2:0:1/1:49 | |
| 22501 chr11 125635046 . T TTTG 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 22502 chr11 125635625 . A ACCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22503 chr11 125639661 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 22504 chr11 125641661 . G C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 22505 chr11 125673357 . C T 6.2 . DP=3;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,44:2:0:0/1:37 | |
| 22506 chr11 125697616 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22507 chr11 125720495 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 22508 chr11 125745111 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22509 chr11 125750124 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22510 chr11 125757792 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 22511 chr11 125766044 . C A 99 . DP=60;AF1=0.5;CI95=0.5,0.5;DP4=12,12,20,11;MQ=46;PV4=0.41,5e-09,1.8e-17,1 PL:DP:SP:GT:GQ 255,0,255:55:4:0/1:99 | |
| 22512 chr11 125769913 . T G 8.64 . DP=36;AF1=0.5;CI95=0.5,0.5;DP4=9,4,0,6;MQ=49;PV4=0.011,0.037,0.019,0.4 PL:DP:SP:GT:GQ 38,0,227:19:20:0/1:41 | |
| 22513 chr11 125771239 . C G 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,44:2:0:0/1:33 | |
| 22514 chr11 125800555 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22515 chr11 125809112 . C CTT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,43:2:0:0/1:43 | |
| 22516 chr11 125819279 . GGA GGAGA 7.35 . INDEL;DP=2;AF1=0.5001;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,36:2:0:0/1:38 | |
| 22517 chr11 125831658 . T A 4.13 . DP=18;AF1=0.4998;CI95=0.5,0.5;DP4=7,4,1,2;MQ=49;PV4=0.54,0.055,0.0023,1 PL:DP:SP:GT:GQ 32,0,247:14:3:0/1:35 | |
| 22518 chr11 125832631 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 22519 chr11 125839372 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22520 chr11 125851055 . A G 99 . DP=33;AF1=0.5;CI95=0.5,0.5;DP4=7,4,6,11;MQ=48;PV4=0.25,7.9e-18,1.4e-06,1 PL:DP:SP:GT:GQ 194,0,255:28:6:0/1:99 | |
| 22521 chr11 125851300 . T C 3.54 . DP=8;AF1=0.4998;CI95=0.5,0.5;DP4=0,3,0,3;MQ=40;PV4=1,3.9e-05,0.094,1 PL:DP:SP:GT:GQ 31,0,99:6:0:0/1:34 | |
| 22522 chr11 125858543 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 22523 chr11 125859738 . G T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22524 chr11 125872790 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22525 chr11 125891103 . CAA CAAA 99 . INDEL;DP=14;AF1=1;CI95=1,1;DP4=0,0,10,0;MQ=50 PL:DP:SP:GT:GQ 177,30,0:10:0:1/1:99 | |
| 22526 chr11 125891269 . C T 99 . DP=28;AF1=1;CI95=1,1;DP4=0,1,6,13;MQ=47;PV4=1,1,0.15,1 PL:DP:SP:GT:GQ 236,38,0:20:0:1/1:99 | |
| 22527 chr11 125892897 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22528 chr11 125907980 . AGTC A 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 22529 chr11 125942734 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 22530 chr11 125947606 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22531 chr11 125970236 . C T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 22532 chr11 125994677 . TC TCC 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 22533 chr11 125996045 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22534 chr11 126008045 . C G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 22535 chr11 126008357 . GTCTGCTTTTTAATTTC GTCTGCTTTTTAATTTCTGCTTTTTAATTTC 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 22536 chr11 126011086 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22537 chr11 126016000 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22538 chr11 126016446 . T G 3.18 . DP=2;AF1=0.5428;CI95=0.5,1;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,8:2:0:0/1:11 | |
| 22539 chr11 126022907 . A C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 22540 chr11 126029147 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22541 chr11 126029909 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 22542 chr11 126036622 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22543 chr11 126052944 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22544 chr11 126055793 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 22545 chr11 126062290 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22546 chr11 126069699 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22547 chr11 126074165 . ACC ACCCC 3.25 . INDEL;DP=8;AF1=0.5;CI95=0.5,0.5;DP4=0,3,1,0;MQ=50;PV4=0.25,1,1,1 PL:DP:SP:GT:GQ 38,0,103:4:0:0/1:41 | |
| 22548 chr11 126081403 . T C 79.1 . DP=20;AF1=1;CI95=0.5,1;DP4=0,0,4,2;MQ=48 PL:DP:SP:GT:GQ 112,18,0:6:0:1/1:90 | |
| 22549 chr11 126099608 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22550 chr11 126099620 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22551 chr11 126103667 . GT GTATGTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22552 chr11 126129802 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22553 chr11 126134928 . C T 48 . DP=28;AF1=0.5;CI95=0.5,0.5;DP4=5,6,0,9;MQ=49;PV4=0.038,0.24,0.084,1 PL:DP:SP:GT:GQ 78,0,176:20:14:0/1:81 | |
| 22554 chr11 126134994 . AC ACTC 3.25 . INDEL;DP=17;AF1=0.5;CI95=0.5,0.5;DP4=3,0,0,1;MQ=50;PV4=0.25,1,1,0.44 PL:DP:SP:GT:GQ 38,0,76:4:0:0/1:41 | |
| 22555 chr11 126139100 . T C 58.5 . DP=10;AF1=1;CI95=0.5,1;DP4=0,0,1,3;MQ=47 PL:DP:SP:GT:GQ 91,12,0:4:0:1/1:72 | |
| 22556 chr11 126146244 . C T 10.4 . DP=36;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=50 PL:DP:SP:GT:GQ 42,9,0:3:0:1/1:63 | |
| 22557 chr11 126146396 . T A 4.77 . DP=25;AF1=0.4999;CI95=0.5,0.5;DP4=3,9,0,4;MQ=49;PV4=0.53,0.039,0.0086,0.39 PL:DP:SP:GT:GQ 33,0,251:16:3:0/1:36 | |
| 22558 chr11 126148432 . T C 23.8 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=45 PL:DP:SP:GT:GQ 55,6,0:2:0:1/1:49 | |
| 22559 chr11 126158196 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22560 chr11 126161374 . C T 3.54 . DP=4;AF1=0.4998;CI95=0.5,0.5;DP4=0,2,0,2;MQ=49;PV4=1,0.026,0.21,1 PL:DP:SP:GT:GQ 31,0,80:4:0:0/1:34 | |
| 22561 chr11 126163691 . A G 29.5 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=49 PL:DP:SP:GT:GQ 62,12,0:4:0:1/1:72 | |
| 22562 chr11 126166257 . ca cAa 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 22563 chr11 126176578 . G A 12.4 . DP=22;AF1=0.5207;CI95=0.5,1;DP4=1,0,5,0;MQ=50;PV4=1,0.0054,0.35,1 PL:DP:SP:GT:GQ 42,0,11:6:0:0/1:14 | |
| 22564 chr11 126228006 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 22565 chr11 126237281 . G A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 22566 chr11 126240152 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 22567 chr11 126259000 . tc tCCAGc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22568 chr11 126261254 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22569 chr11 126262160 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22570 chr11 126264508 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22571 chr11 126277008 . A T 5.46 . DP=4;AF1=0.4999;CI95=0.5,0.5;DP4=1,1,0,1;MQ=48;PV4=1,0.38,0,0.29 PL:DP:SP:GT:GQ 34,0,85:3:0:0/1:37 | |
| 22572 chr11 126277216 . C T 93 . DP=35;AF1=0.5;CI95=0.5,0.5;DP4=8,15,4,6;MQ=49;PV4=1,4.7e-07,7.3e-06,1 PL:DP:SP:GT:GQ 123,0,255:33:0:0/1:99 | |
| 22573 chr11 126278075 . C T 99 . DP=32;AF1=0.5;CI95=0.5,0.5;DP4=5,15,1,10;MQ=48;PV4=0.38,1.1e-06,1.1e-08,1 PL:DP:SP:GT:GQ 132,0,255:31:4:0/1:99 | |
| 22574 chr11 126282255 . T A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 22575 chr11 126283785 . C T 35 . DP=5;AF1=0.5;CI95=0.5,0.5;DP4=2,0,2,0;MQ=47;PV4=1,0.42,0,0.32 PL:DP:SP:GT:GQ 65,0,63:4:0:0/1:64 | |
| 22576 chr11 126292596 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 22577 chr11 126294800 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22578 chr11 126294817 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22579 chr11 126319875 . C A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 22580 chr11 126327265 . cgtgt cGTgtgt 10.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=48 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 22581 chr11 126338319 . G A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 22582 chr11 126358981 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22583 chr11 126362686 . A C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 22584 chr11 126369983 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22585 chr11 126378266 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22586 chr11 126396955 . GGAGAGAGAGAGAGAGA GGAGAGAGAGAGAGA 6.56 . INDEL;DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 22587 chr11 126397314 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 22588 chr11 126409524 . T C 4.13 . DP=3;AF1=0.4998;CI95=0.5,0.5;DP4=1,1,0,1;MQ=48;PV4=1,0.026,0,1 PL:DP:SP:GT:GQ 32,0,91:3:0:0/1:35 | |
| 22589 chr11 126412080 . AGG A 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 22590 chr11 126428720 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22591 chr11 126432484 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22592 chr11 126433398 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22593 chr11 126443630 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22594 chr11 126462878 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 22595 chr11 126465589 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22596 chr11 126493880 . A AGCGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22597 chr11 126504959 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22598 chr11 126513619 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 22599 chr11 126526809 . T C 4.77 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22600 chr11 126530879 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 22601 chr11 126535499 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 22602 chr11 126544248 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22603 chr11 126549296 . G A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 22604 chr11 126563548 . AAA AAAGAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22605 chr11 126573216 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22606 chr11 126574515 . C T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 22607 chr11 126580253 . A G 6.22 . DP=2;AF1=0.5039;CI95=0.5,0.5;DP4=1,0,0,1;MQ=41;PV4=1,1,1,1 PL:DP:SP:GT:GQ 35,0,18:2:0:0/1:21 | |
| 22608 chr11 126590887 . T A 14.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=44 PL:DP:SP:GT:GQ 46,6,0:2:0:1/1:49 | |
| 22609 chr11 126598364 . G A 8.65 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 22610 chr11 126598822 . AGC A 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 22611 chr11 126617177 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 22612 chr11 126635111 . A AGAGCCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22613 chr11 126640183 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22614 chr11 126657874 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 22615 chr11 126664776 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22616 chr11 126668952 . tg tGGACCCCTGGg 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22617 chr11 126679866 . T A 4.8 . DP=2;AF1=0.5049;CI95=0.5,0.5;DP4=1,0,1,0;MQ=41;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,17:2:0:0/1:20 | |
| 22618 chr11 126698007 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22619 chr11 126713316 . TC TCAAC 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22620 chr11 126739566 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 22621 chr11 126752432 . at aTt 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 22622 chr11 126754032 . G A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 22623 chr11 126754455 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22624 chr11 126775276 . C T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 22625 chr11 126798132 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 22626 chr11 126818690 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22627 chr11 126841414 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22628 chr11 126883383 . A AAGTTGAGAGT 10.8 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 | |
| 22629 chr11 126885497 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22630 chr11 126897012 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22631 chr11 126903395 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22632 chr11 126903410 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22633 chr11 126910283 . t tTACTGCCCTGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22634 chr11 126917094 . G GTTGCTGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22635 chr11 126925012 . TGT TGTTAATAGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22636 chr11 126926523 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22637 chr11 126938027 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22638 chr11 126947220 . aa aATTTGCACa 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22639 chr11 126953679 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22640 chr11 126953855 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22641 chr11 126979194 . A AC 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 22642 chr11 126979395 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22643 chr11 126983231 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22644 chr11 126986698 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22645 chr11 127004547 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22646 chr11 127055088 . TTCTA TTCTATCTA 61.2 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=50 PL:DP:SP:GT:GQ 100,6,0:2:0:1/1:49 | |
| 22647 chr11 127078598 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22648 chr11 127094529 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22649 chr11 127096412 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22650 chr11 127103127 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 22651 chr11 127139879 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22652 chr11 127143745 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22653 chr11 127145886 . C T 4.77 . DP=3;AF1=0.4999;CI95=0.5,0.5;DP4=2,0,1,0;MQ=47;PV4=1,1,0.14,1 PL:DP:SP:GT:GQ 33,0,57:3:0:0/1:36 | |
| 22654 chr11 127165382 . C G 5.46 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,44:2:0:0/1:37 | |
| 22655 chr11 127181056 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22656 chr11 127238526 . atct a 63.4 . INDEL;DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=50 PL:DP:SP:GT:GQ 103,9,0:3:0:1/1:63 | |
| 22657 chr11 127244961 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22658 chr11 127265729 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22659 chr11 127296110 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22660 chr11 127311390 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 22661 chr11 127366666 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22662 chr11 127375550 . C CATGG 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22663 chr11 127383311 . C A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22664 chr11 127391576 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22665 chr11 127398159 . G C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 22666 chr11 127424682 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 22667 chr11 127439656 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22668 chr11 127455728 . A C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 22669 chr11 127455997 . GACTCACTC GACTC 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22670 chr11 127470062 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22671 chr11 127470066 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22672 chr11 127504914 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22673 chr11 127525934 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22674 chr11 127531981 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 22675 chr11 127543733 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22676 chr11 127553848 . C A 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 22677 chr11 127560816 . T G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 22678 chr11 127571472 . A C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 22679 chr11 127575632 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22680 chr11 127578048 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 22681 chr11 127582667 . A C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 22682 chr11 127591428 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22683 chr11 127594513 . t tCC 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 22684 chr11 127594724 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22685 chr11 127607838 . C CTAGCGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22686 chr11 127614919 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22687 chr11 127617265 . T G 7.59 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=48 PL:DP:SP:GT:GQ 38,6,0:2:0:1/1:49 | |
| 22688 chr11 127645316 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22689 chr11 127645974 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 22690 chr11 127667110 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22691 chr11 127674449 . g gCGCTCTGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22692 chr11 127683710 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22693 chr11 127684555 . G T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 22694 chr11 127685569 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22695 chr11 127706896 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 22696 chr11 127714541 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 22697 chr11 127731016 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22698 chr11 127761489 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22699 chr11 127761499 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22700 chr11 127768417 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22701 chr11 127770121 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 22702 chr11 127782157 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 22703 chr11 127811204 . T TAC 7.36 . INDEL;DP=3;AF1=0.5012;CI95=0.5,0.5;DP4=1,0,1,0;MQ=41;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,23:2:0:0/1:26 | |
| 22704 chr11 127814378 . T G 4.15 . DP=2;AF1=0.5049;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,17:2:0:0/1:20 | |
| 22705 chr11 127825417 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 22706 chr11 127838643 . C G 6.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22707 chr11 127849509 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22708 chr11 127870977 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22709 chr11 127871523 . C A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 22710 chr11 127872536 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22711 chr11 127890690 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 22712 chr11 127895028 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22713 chr11 127906666 . G C 4.77 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22714 chr11 127924957 . T A 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22715 chr11 127930265 . A C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22716 chr11 127930764 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22717 chr11 127937015 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22718 chr11 127958466 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22719 chr11 127969906 . A C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 22720 chr11 128000477 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22721 chr11 128058657 . G T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 22722 chr11 128059142 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22723 chr11 128073071 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 22724 chr11 128075486 . T TCTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22725 chr11 128082073 . C T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 22726 chr11 128102703 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 22727 chr11 128103004 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 22728 chr11 128111481 . A AT 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 22729 chr11 128121856 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22730 chr11 128133057 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22731 chr11 128138834 . a aCGG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22732 chr11 128141286 . A C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 22733 chr11 128145096 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22734 chr11 128155900 . C CCGTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22735 chr11 128161072 . T A 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,1;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,41:2:0:0/1:33 | |
| 22736 chr11 128167087 . A AACT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22737 chr11 128201751 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22738 chr11 128204131 . CT CTCTCTT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 22739 chr11 128219992 . T TGACTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22740 chr11 128229606 . T A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 22741 chr11 128260181 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22742 chr11 128267124 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 22743 chr11 128272181 . actC aCTctC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22744 chr11 128279208 . GA GAGAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22745 chr11 128286951 . TA TACA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 22746 chr11 128326079 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22747 chr11 128326494 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22748 chr11 128329213 . C CACCTCCG 8.19 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=47 PL:DP:SP:GT:GQ 45,3,0:1:0:1/1:41 | |
| 22749 chr11 128330791 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22750 chr11 128333503 . T C 99 . DP=57;AF1=0.5;CI95=0.5,0.5;DP4=21,14,13,7;MQ=49;PV4=0.78,4e-17,0.0013,1 PL:DP:SP:GT:GQ 136,0,255:55:1:0/1:99 | |
| 22751 chr11 128360178 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 22752 chr11 128361924 . A AGAACTTCCGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22753 chr11 128368026 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22754 chr11 128384798 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22755 chr11 128413615 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22756 chr11 128414298 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22757 chr11 128420479 . G A 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22758 chr11 128425717 . A ATTGTCCAG 5.08 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,44:2:0:0/1:42 | |
| 22759 chr11 128428005 . T C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 22760 chr11 128464702 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22761 chr11 128470519 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22762 chr11 128475965 . G C 17.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47 PL:DP:SP:GT:GQ 49,6,0:2:0:1/1:49 | |
| 22763 chr11 128484979 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 22764 chr11 128495106 . C T 6.02 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 36,6,0:2:0:1/1:49 | |
| 22765 chr11 128497794 . TGCC T 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 22766 chr11 128525584 . a aTCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22767 chr11 128532975 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22768 chr11 128543581 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22769 chr11 128556609 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22770 chr11 128559729 . ACCC ACCCCCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22771 chr11 128559873 . C G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 22772 chr11 128563899 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22773 chr11 128563922 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22774 chr11 128567929 . TCC TC 21.3 . INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=50 PL:DP:SP:GT:GQ 60,6,0:2:0:1/1:49 | |
| 22775 chr11 128570102 . a aAG 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 22776 chr11 128595538 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22777 chr11 128602993 . T C 44.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=43 PL:DP:SP:GT:GQ 76,6,0:2:0:1/1:49 | |
| 22778 chr11 128603783 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22779 chr11 128612338 . C CTACCTGGGG 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 22780 chr11 128613888 . T C 7.81 . DP=2;AF1=0.5025;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,20:2:0:0/1:23 | |
| 22781 chr11 128617884 . TCAA TCAACAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22782 chr11 128618179 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22783 chr11 128620761 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22784 chr11 128632515 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 22785 chr11 128636997 . A T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 22786 chr11 128659085 . GT GTGGTTT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22787 chr11 128660499 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22788 chr11 128708947 . T A 30 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=47 PL:DP:SP:GT:GQ 62,9,0:3:0:1/1:63 | |
| 22789 chr11 128736514 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22790 chr11 128741549 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22791 chr11 128748072 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22792 chr11 128750054 . C G 19.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 51,6,0:2:0:1/1:49 | |
| 22793 chr11 128770756 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22794 chr11 128773413 . T C 99 . DP=24;AF1=0.5;CI95=0.5,0.5;DP4=2,7,3,8;MQ=46;PV4=1,0.00044,5.3e-07,0.059 PL:DP:SP:GT:GQ 222,0,255:20:0:0/1:99 | |
| 22795 chr11 128773819 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22796 chr11 128781339 . T C 99 . DP=25;AF1=1;CI95=0.5,1;DP4=2,0,3,14;MQ=48;PV4=0.058,1,1,1 PL:DP:SP:GT:GQ 166,16,0:19:12:1/1:80 | |
| 22797 chr11 128781978 . T G 58 . DP=29;AF1=0.5032;CI95=0.5,0.5;DP4=2,0,3,4;MQ=49;PV4=0.44,0.091,0.37,1 PL:DP:SP:GT:GQ 88,0,19:9:4:0/1:22 | |
| 22798 chr11 128782002 . T C 99 . DP=43;AF1=1;CI95=1,1;DP4=0,0,20,4;MQ=46 PL:DP:SP:GT:GQ 223,72,0:24:0:1/1:99 | |
| 22799 chr11 128782012 . C G 53.2 . DP=54;AF1=1;CI95=0.5,1;DP4=0,1,6,1;MQ=47;PV4=0.25,1,0.27,1 PL:DP:SP:GT:GQ 85,8,0:8:0:1/1:56 | |
| 22800 chr11 128786294 . G A 99 . DP=29;AF1=1;CI95=1,1;DP4=0,0,23,1;MQ=43 PL:DP:SP:GT:GQ 255,72,0:24:0:1/1:99 | |
| 22801 chr11 128788354 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22802 chr11 128806776 . C T 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 22803 chr11 128817559 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22804 chr11 128818048 . T G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 22805 chr11 128818682 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 22806 chr11 128842873 . T C 57 . DP=57;AF1=0.5;CI95=0.5,0.5;DP4=7,7,16,0;MQ=49;PV4=0.0017,0.0042,0.012,1 PL:DP:SP:GT:GQ 87,0,227:30:28:0/1:90 | |
| 22807 chr11 128843249 . T C 40 . DP=19;AF1=0.5003;CI95=0.5,0.5;DP4=0,3,0,6;MQ=49;PV4=1,1,0.034,1 PL:DP:SP:GT:GQ 70,0,29:9:0:0/1:32 | |
| 22808 chr11 128846547 . C A 4.13 . DP=14;AF1=0.4998;CI95=0.5,0.5;DP4=1,5,0,3;MQ=49;PV4=1,0.2,0.083,1 PL:DP:SP:GT:GQ 32,0,119:9:0:0/1:35 | |
| 22809 chr11 128879954 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22810 chr11 128882696 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22811 chr11 128904965 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22812 chr11 128942437 . T G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 22813 chr11 128964657 . GGA GGATGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22814 chr11 128982212 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 22815 chr11 128985329 . A T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 22816 chr11 129017038 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22817 chr11 129074283 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 22818 chr11 129107542 . T C 7.85 . DP=2;AF1=0.508;CI95=0.5,0.5;DP4=1,0,0,1;MQ=42;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,15:2:0:0/1:18 | |
| 22819 chr11 129118616 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22820 chr11 129129147 . T G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 22821 chr11 129133547 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 22822 chr11 129163368 . A ACTTGAATTT 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 22823 chr11 129210719 . a aAGCG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22824 chr11 129224440 . g gTCATCATGTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22825 chr11 129250348 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 22826 chr11 129265622 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22827 chr11 129289429 . T G 6.98 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,44:2:0:0/1:38 | |
| 22828 chr11 129307007 . C A 18 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=49 PL:DP:SP:GT:GQ 50,9,0:3:0:1/1:63 | |
| 22829 chr11 129327998 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 22830 chr11 129340001 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22831 chr11 129353240 . T C 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22832 chr11 129362891 . T G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 22833 chr11 129370905 . g gACTC 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 22834 chr11 129372871 . C G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 22835 chr11 129387276 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 22836 chr11 129403180 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22837 chr11 129407909 . A G 15.1 . DP=5;AF1=0.5;CI95=0.5,0.5;DP4=2,0,3,0;MQ=48;PV4=1,0.0023,0.46,0.44 PL:DP:SP:GT:GQ 45,0,75:5:0:0/1:48 | |
| 22838 chr11 129427326 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22839 chr11 129440034 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 22840 chr11 129440324 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22841 chr11 129450564 . A C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 22842 chr11 129451331 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 22843 chr11 129478348 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22844 chr11 129485345 . c cGTCTCCA 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 22845 chr11 129503032 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 22846 chr11 129509992 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22847 chr11 129569210 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 22848 chr11 129599185 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 22849 chr11 129599687 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22850 chr11 129616469 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22851 chr11 129628559 . G C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 22852 chr11 129645668 . t tCGAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22853 chr11 129662972 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22854 chr11 129722553 . C T 43.1 . DP=22;AF1=1;CI95=0.5,1;DP4=0,0,0,6;MQ=49 PL:DP:SP:GT:GQ 76,18,0:6:0:1/1:90 | |
| 22855 chr11 129741393 . a aCTGTGGACAGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22856 chr11 129743914 . T C 78 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=3,2,1,3;MQ=47;PV4=0.52,0.014,0.00012,1 PL:DP:SP:GT:GQ 108,0,184:9:3:0/1:99 | |
| 22857 chr11 129744872 . A G 3.01 . DP=17;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,3;MQ=50;PV4=1,0.0049,0.33,1 PL:DP:SP:GT:GQ 30,0,38:4:0:0/1:32 | |
| 22858 chr11 129745379 . A T,G 13 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=43 PL:DP:SP:GT:GQ 68,30,43,24,0,43:3:0:1/1:49 | |
| 22859 chr11 129753706 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22860 chr11 129754103 . T TG 42.4 . INDEL;DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=50 PL:DP:SP:GT:GQ 82,9,0:3:0:1/1:63 | |
| 22861 chr11 129754644 . A G 55.5 . DP=11;AF1=1;CI95=0.5,1;DP4=0,0,1,3;MQ=47 PL:DP:SP:GT:GQ 88,12,0:4:0:1/1:72 | |
| 22862 chr11 129754974 . G C 20.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47 PL:DP:SP:GT:GQ 52,6,0:2:0:1/1:49 | |
| 22863 chr11 129765691 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22864 chr11 129770600 . AGGG AG 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 22865 chr11 129772013 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22866 chr11 129772172 . T C 74 . DP=30;AF1=0.5;CI95=0.5,0.5;DP4=15,0,14,0;MQ=49;PV4=1,1.2e-10,0.00069,1 PL:DP:SP:GT:GQ 104,0,230:29:0:0/1:99 | |
| 22867 chr11 129783703 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22868 chr11 129787081 . C G 31 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=3,10,0,5;MQ=48;PV4=0.52,0.45,0.00068,1 PL:DP:SP:GT:GQ 61,0,197:18:3:0/1:64 | |
| 22869 chr11 129795426 . T C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 22870 chr11 129798157 . A T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 22871 chr11 129801043 . C T 11.4 . DP=40;AF1=0.5063;CI95=0.5,0.5;DP4=0,1,2,1;MQ=49;PV4=1,0.14,0.33,1 PL:DP:SP:GT:GQ 41,0,16:4:0:0/1:19 | |
| 22872 chr11 129801909 . G T 30 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=4,0,4,0;MQ=48;PV4=1,0.19,0.0034,1 PL:DP:SP:GT:GQ 60,0,84:8:0:0/1:63 | |
| 22873 chr11 129804813 . T C 31.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=46 PL:DP:SP:GT:GQ 63,6,0:2:0:1/1:49 | |
| 22874 chr11 129818870 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 22875 chr11 129822487 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 22876 chr11 129827700 . T A 21 . DP=24;AF1=0.5;CI95=0.5,0.5;DP4=5,8,0,9;MQ=50;PV4=0.054,1.4e-12,0.092,0.087 PL:DP:SP:GT:GQ 51,0,255:22:13:0/1:54 | |
| 22877 chr11 129829467 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 22878 chr11 129837729 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22879 chr11 129844978 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 22880 chr11 129859141 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 22881 chr11 129869157 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22882 chr11 129889729 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 22883 chr11 129902957 . A G 4.13 . DP=3;AF1=0.4998;CI95=0.5,0.5;DP4=1,1,0,1;MQ=48;PV4=1,1,0,1 PL:DP:SP:GT:GQ 32,0,60:3:0:0/1:35 | |
| 22884 chr11 129907904 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 22885 chr11 129914820 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22886 chr11 129932615 . gt gTCCTCCCTt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22887 chr11 129944663 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22888 chr11 129984328 . T G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 22889 chr11 129990587 . A G 43 . DP=23;AF1=0.5;CI95=0.5,0.5;DP4=5,0,7,0;MQ=48;PV4=1,0.024,0.0076,1 PL:DP:SP:GT:GQ 73,0,123:12:0:0/1:76 | |
| 22890 chr11 129991700 . T C 6.98 . DP=20;AF1=0.4999;CI95=0.5,0.5;DP4=4,5,5,0;MQ=49;PV4=0.086,0.01,0.0081,1 PL:DP:SP:GT:GQ 36,0,219:14:11:0/1:39 | |
| 22891 chr11 129998900 . T C 4.99 . DP=9;AF1=0.5429;CI95=0.5,1;DP4=0,1,2,0;MQ=48;PV4=0.33,1,0.077,1 PL:DP:SP:GT:GQ 33,0,8:3:0:0/1:11 | |
| 22892 chr11 130006693 . GC GCC 3.25 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 22893 chr11 130041072 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22894 chr11 130064705 . A G 4.61 . DP=9;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 34,6,0:2:0:1/1:49 | |
| 22895 chr11 130066335 . C T 99 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,5;MQ=46;PV4=1,0.45,5e-08,1 PL:DP:SP:GT:GQ 130,0,108:9:0:0/1:99 | |
| 22896 chr11 130076958 . G A 9.53 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 22897 chr11 130090904 . G A 7.59 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=50 PL:DP:SP:GT:GQ 38,6,0:2:0:1/1:49 | |
| 22898 chr11 130091011 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22899 chr11 130091336 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22900 chr11 130112583 . gta g 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 22901 chr11 130128284 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22902 chr11 130151112 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 22903 chr11 130165697 . G C 67.1 . DP=26;AF1=1;CI95=0.5,1;DP4=0,0,5,1;MQ=47 PL:DP:SP:GT:GQ 100,18,0:6:0:1/1:90 | |
| 22904 chr11 130166264 . C G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 22905 chr11 130186416 . T C 13.2 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 22906 chr11 130186428 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22907 chr11 130191206 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22908 chr11 130201532 . atcgc a 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22909 chr11 130247835 . C A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 22910 chr11 130258266 . T TCAAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22911 chr11 130277322 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22912 chr11 130278506 . TCTG TCTGTTGCTG 3.25 . INDEL;DP=7;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,44:2:0:0/1:40 | |
| 22913 chr11 130278924 . T G 8.44 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 39,6,0:2:0:1/1:49 | |
| 22914 chr11 130281488 . G A 99 . DP=44;AF1=1;CI95=1,1;DP4=0,2,13,21;MQ=44;PV4=0.53,0.32,2.3e-05,1 PL:DP:SP:GT:GQ 255,34,0:36:3:1/1:99 | |
| 22915 chr11 130281646 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 22916 chr11 130283252 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22917 chr11 130283260 . T A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22918 chr11 130286415 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 22919 chr11 130286715 . A C 56.1 . DP=9;AF1=1;CI95=0.5,1;DP4=0,0,6,0;MQ=45 PL:DP:SP:GT:GQ 89,18,0:6:0:1/1:90 | |
| 22920 chr11 130286725 . A T 6.98 . DP=15;AF1=0.4999;CI95=0.5,0.5;DP4=8,0,2,0;MQ=46;PV4=1,0.24,0.012,1 PL:DP:SP:GT:GQ 36,0,172:10:0:0/1:39 | |
| 22921 chr11 130286766 . G A 99 . DP=45;AF1=1;CI95=1,1;DP4=0,0,40,1;MQ=49 PL:DP:SP:GT:GQ 143,123,0:41:0:1/1:99 | |
| 22922 chr11 130293894 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22923 chr11 130293991 . T C 52.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=43 PL:DP:SP:GT:GQ 84,6,0:2:0:1/1:49 | |
| 22924 chr11 130310243 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22925 chr11 130324737 . TAA TAAGAGACAA 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=49 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 22926 chr11 130330517 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22927 chr11 130339193 . C G 6.4 . DP=10;AF1=0.5335;CI95=0.5,1;DP4=0,1,0,2;MQ=48;PV4=1,1,0.077,0.36 PL:DP:SP:GT:GQ 35,0,9:3:0:0/1:12 | |
| 22928 chr11 130339837 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22929 chr11 130358163 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22930 chr11 130358933 . A T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22931 chr11 130364215 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 22932 chr11 130390236 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22933 chr11 130414381 . C G 12.3 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 22934 chr11 130416832 . T G 3.01 . DP=13;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,3;MQ=50;PV4=1,0.0017,1,1 PL:DP:SP:GT:GQ 30,0,35:4:0:0/1:32 | |
| 22935 chr11 130418510 . C CT 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 22936 chr11 130420718 . A T 3.02 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22937 chr11 130424729 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22938 chr11 130471499 . C T 8.44 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=49 PL:DP:SP:GT:GQ 39,6,0:2:0:1/1:49 | |
| 22939 chr11 130479046 . C A 3.03 . DP=2;AF1=0.5029;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,19:2:0:0/1:22 | |
| 22940 chr11 130483401 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22941 chr11 130491997 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22942 chr11 130547656 . G T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 22943 chr11 130560100 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22944 chr11 130564310 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22945 chr11 130606386 . G C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22946 chr11 130614344 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 22947 chr11 130661409 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22948 chr11 130687381 . G T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 22949 chr11 130688716 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22950 chr11 130720101 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 22951 chr11 130723937 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22952 chr11 130738127 . GA GAAGAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22953 chr11 130762961 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22954 chr11 130767738 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22955 chr11 130776454 . A G 26 . DP=9;AF1=0.5;CI95=0.5,0.5;DP4=6,0,2,0;MQ=48;PV4=1,0.16,0,1 PL:DP:SP:GT:GQ 56,0,171:8:0:0/1:59 | |
| 22956 chr11 130776646 . T A 10.4 . DP=24;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=50 PL:DP:SP:GT:GQ 42,9,0:3:0:1/1:63 | |
| 22957 chr11 130780015 . C T 3.54 . DP=4;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,1;MQ=48;PV4=1,0.063,0.11,0 PL:DP:SP:GT:GQ 31,0,41:3:0:0/1:34 | |
| 22958 chr11 130796138 . ac aCGCGGc 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22959 chr11 130809559 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 22960 chr11 130815115 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22961 chr11 130825517 . G C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 22962 chr11 130830234 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22963 chr11 130846816 . t tCAGCTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22964 chr11 130896774 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 22965 chr11 130902526 . A C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 22966 chr11 130911682 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 22967 chr11 130916512 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22968 chr11 130921329 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 22969 chr11 130921345 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22970 chr11 130922578 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22971 chr11 130933037 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22972 chr11 130945272 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 22973 chr11 130964586 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 22974 chr11 130974810 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22975 chr11 130977860 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 22976 chr11 130988751 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22977 chr11 131005973 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22978 chr11 131005978 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22979 chr11 131008212 . CCCC CCCCAGACCC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22980 chr11 131029667 . GG GGGTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22981 chr11 131041318 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22982 chr11 131042367 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 22983 chr11 131045213 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 22984 chr11 131058227 . C A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 22985 chr11 131076944 . A G 7.8 . DP=2;AF1=0.5001;CI95=0.5,0.5;DP4=1,0,1,0;MQ=41;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,33:2:0:0/1:35 | |
| 22986 chr11 131085528 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 22987 chr11 131092120 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22988 chr11 131106347 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22989 chr11 131116997 . A C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 22990 chr11 131123369 . GG GGGGTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 22991 chr11 131131479 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22992 chr11 131174529 . TC TCCC 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 22993 chr11 131175011 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 22994 chr11 131175649 . T A 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 22995 chr11 131175686 . T G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 22996 chr11 131189960 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 22997 chr11 131193231 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22998 chr11 131199609 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 22999 chr11 131214607 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 23000 chr11 131226293 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23001 chr11 131236003 . T A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 23002 chr11 131238902 . A ATAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23003 chr11 131243202 . GG GGACG 7.35 . INDEL;DP=3;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 23004 chr11 131245391 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 23005 chr11 131249242 . ca cAAAGGa 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23006 chr11 131249773 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23007 chr11 131273806 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 23008 chr11 131279607 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 23009 chr11 131288201 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 23010 chr11 131296665 . T TG 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 23011 chr11 131313195 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 23012 chr11 131330058 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 23013 chr11 131331105 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23014 chr11 131343517 . C T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 23015 chr11 131350346 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23016 chr11 131365170 . C CATA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23017 chr11 131419413 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23018 chr11 131420030 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 23019 chr11 131449814 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23020 chr11 131451666 . A T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 23021 chr11 131455439 . C T 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,41:2:0:0/1:39 | |
| 23022 chr11 131470501 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 23023 chr11 131480104 . GC GCGCCGCGACC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23024 chr11 131483767 . A C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 23025 chr11 131491310 . G A 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,0,1;MQ=44;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,44:2:0:0/1:35 | |
| 23026 chr11 131503426 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 23027 chr11 131507280 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 23028 chr11 131511465 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 23029 chr11 131517444 . C CGA 5.08 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 23030 chr11 131530309 . C G 3.01 . DP=4;AF1=0.4998;CI95=0.5,0.5;DP4=1,1,0,1;MQ=47;PV4=1,1,0,1 PL:DP:SP:GT:GQ 30,0,57:3:0:0/1:33 | |
| 23031 chr11 131530309 . C CGCTT 7.35 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 23032 chr11 131549298 . C T 9.31 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 23033 chr11 131566979 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23034 chr11 131576161 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 23035 chr11 131582156 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 23036 chr11 131582873 . T C 4.13 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 32,0,37:2:0:0/1:34 | |
| 23037 chr11 131605668 . T TTAGTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23038 chr11 131607210 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 23039 chr11 131616777 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 23040 chr11 131619279 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23041 chr11 131630099 . A G 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 23042 chr11 131648634 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23043 chr11 131695719 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23044 chr11 131698482 . C T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 23045 chr11 131709520 . C T 19.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 51,6,0:2:0:1/1:49 | |
| 23046 chr11 131719248 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23047 chr11 131720680 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 23048 chr11 131736031 . G A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 23049 chr11 131774864 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23050 chr11 131776917 . CTG CTGTG 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 23051 chr11 131782028 . G A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 23052 chr11 131792386 . A C 5.46 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=1,0,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 34,0,44:2:0:0/1:37 | |
| 23053 chr11 131796778 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23054 chr11 131803920 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 23055 chr11 131823326 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 23056 chr11 131837049 . at aTCTt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23057 chr11 131849266 . T TCTCTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23058 chr11 131880601 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 23059 chr11 131888297 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23060 chr11 131894160 . C G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 23061 chr11 131899072 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 23062 chr11 131902332 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 23063 chr11 131909713 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23064 chr11 131911134 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 23065 chr11 131914717 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 23066 chr11 131920424 . T A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23067 chr11 131933511 . A T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 23068 chr11 131959999 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 23069 chr11 131963134 . C G 4.77 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 33,0,32:2:0:0/1:32 | |
| 23070 chr11 131964858 . T C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 23071 chr11 131982231 . A AATGAACC 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=48 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 23072 chr11 131996688 . C T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 23073 chr11 131999902 . C G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 23074 chr11 132016193 . GGGT GGGTGGT 7.35 . INDEL;DP=8;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 23075 chr11 132021747 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23076 chr11 132033064 . T A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 23077 chr11 132040837 . C A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 23078 chr11 132065096 . a aAGG 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 23079 chr11 132087536 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 23080 chr11 132091027 . G C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 23081 chr11 132093822 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 23082 chr11 132138697 . C A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 23083 chr11 132156143 . C G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 23084 chr11 132177633 . A C 11.4 . DP=35;AF1=0.5128;CI95=0.5,0.5;DP4=1,0,0,2;MQ=48;PV4=0.33,1,0.077,1 PL:DP:SP:GT:GQ 41,0,13:3:0:0/1:16 | |
| 23085 chr11 132181869 . GTCTTTCTTTC GTCTTTC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23086 chr11 132208266 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 23087 chr11 132208308 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 23088 chr11 132223700 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 23089 chr11 132251977 . A G 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,39:2:0:0/1:32 | |
| 23090 chr11 132252000 . c cGATA 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23091 chr11 132257733 . a aCGT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23092 chr11 132281730 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 23093 chr11 132302540 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 23094 chr11 132306153 . T C 19.1 . DP=36;AF1=0.508;CI95=0.5,0.5;DP4=1,0,0,3;MQ=49;PV4=0.25,0.27,0.21,1 PL:DP:SP:GT:GQ 49,0,15:4:0:0/1:18 | |
| 23095 chr11 132307077 . G A 99 . DP=38;AF1=0.5;CI95=0.5,0.5;DP4=13,4,15,1;MQ=47;PV4=0.34,2e-05,2e-16,1 PL:DP:SP:GT:GQ 207,0,255:33:5:0/1:99 | |
| 23096 chr11 132309235 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 23097 chr11 132319221 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 23098 chr11 132319955 . AT ATCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23099 chr11 132329126 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23100 chr11 132340179 . g gGAGAGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23101 chr11 132348333 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 23102 chr11 132369757 . T G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 23103 chr11 132370655 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 23104 chr11 132382111 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 23105 chr11 132388175 . G A 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,36:2:0:0/1:32 | |
| 23106 chr11 132409390 . A ATTNNN 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23107 chr11 132409717 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23108 chr11 132417998 . G C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 23109 chr11 132429470 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 23110 chr11 132447373 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 23111 chr11 132451721 . T G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 23112 chr11 132454476 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23113 chr11 132455531 . T C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 23114 chr11 132465494 . G GCCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23115 chr11 132470072 . GA GACTACTAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23116 chr11 132519047 . G C 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 23117 chr11 132532444 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 23118 chr11 132539298 . TGGAAAAGGGAAAAGGGAAAA TGGAAAAGGGAAAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23119 chr11 132556299 . G T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 23120 chr11 132560831 . C CCG 5.08 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 41,0,44:2:0:0/1:42 | |
| 23121 chr11 132584774 . G T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23122 chr11 132589507 . G A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 23123 chr11 132598448 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=32 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 23124 chr11 132613654 . TT TTTCT 11.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 49,3,0:1:0:1/1:41 | |
| 23125 chr11 132620546 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 23126 chr11 132650808 . T G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 23127 chr11 132672551 . C G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 23128 chr11 132673205 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 23129 chr11 132673568 . A T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 23130 chr11 132691264 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 23131 chr11 132691368 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 23132 chr11 132691805 . A G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 23133 chr11 132693798 . C G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 23134 chr11 132697729 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 23135 chr11 132697743 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=31 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 23136 chr11 132701712 . A C 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 23137 chr11 132734737 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=34 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23138 chr11 132738880 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 23139 chr11 132754950 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=30 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23140 chr11 132777637 . T C 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 23141 chr11 132778169 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23142 chr11 132782044 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 23143 chr11 132801865 . T C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 23144 chr11 132808356 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 23145 chr11 132819887 . C A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 23146 chr11 132823912 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23147 chr11 132836167 . G A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 23148 chr11 132871263 . T A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 23149 chr11 132872700 . T TTCTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23150 chr11 132892426 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 23151 chr11 132897384 . gt gTAt 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23152 chr11 132904948 . C T 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 23153 chr11 132917492 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 23154 chr11 132923520 . C G 3.54 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,44:2:0:0/1:34 | |
| 23155 chr11 132947321 . G T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=34 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 23156 chr11 132963858 . A G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 23157 chr11 132965632 . C G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 23158 chr11 132974630 . A G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 23159 chr11 132984395 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 23160 chr11 132986408 . a aTGTTG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23161 chr11 132999503 . gta g 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 23162 chr11 133005559 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23163 chr11 133015714 . AA AAACTCCCCTA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23164 chr11 133017007 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 23165 chr11 133065296 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 23166 chr11 133068485 . A G 11.1 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=49 PL:DP:SP:GT:GQ 42,6,0:2:0:1/1:49 | |
| 23167 chr11 133090096 . A G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 23168 chr11 133101221 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23169 chr11 133104849 . A G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 23170 chr11 133122127 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 23171 chr11 133126320 . A G 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 23172 chr11 133128432 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23173 chr11 133143006 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 23174 chr11 133148945 . AG AGATCGG 7.38 . INDEL;DP=3;AF1=0.504;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,18:2:0:0/1:21 | |
| 23175 chr11 133150055 . A G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 23176 chr11 133176464 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 23177 chr11 133177285 . C T 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 23178 chr11 133196919 . A C 7.09 . DP=2;AF1=0.5162;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,12:2:0:0/1:15 | |
| 23179 chr11 133205071 . A T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 23180 chr11 133206705 . T G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 23181 chr11 133214106 . GACAC GAC 3.81 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 23182 chr11 133221987 . C A 4.13 . DP=3;AF1=0.4998;CI95=0.5,0.5;DP4=1,1,0,1;MQ=47;PV4=1,0.47,0,0 PL:DP:SP:GT:GQ 32,0,66:3:0:0/1:35 | |
| 23183 chr11 133224178 . atggtggtg atg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23184 chr11 133233194 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 23185 chr11 133242679 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 23186 chr11 133246423 . T TTCAC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23187 chr11 133258905 . T G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 23188 chr11 133259643 . G A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 23189 chr11 133260907 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 23190 chr11 133283557 . TT TTCCGAT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23191 chr11 133283965 . A ACGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23192 chr11 133285489 . G C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 23193 chr11 133330272 . A G 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 23194 chr11 133342261 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 23195 chr11 133368176 . G A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23196 chr11 133368300 . T C 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,0,1;MQ=45;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,43:2:0:0/1:33 | |
| 23197 chr11 133373781 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 23198 chr11 133376847 . C G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 23199 chr11 133384076 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 23200 chr11 133399827 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 23201 chr11 133403503 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 23202 chr11 133404263 . T G 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 23203 chr11 133453664 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23204 chr11 133462709 . C A 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 23205 chr11 133464555 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23206 chr11 133497588 . C G 8.65 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 23207 chr11 133503458 . TCCCAAACC TCC 9.05 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 46,3,0:1:0:1/1:41 | |
| 23208 chr11 133507923 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 23209 chr11 133510384 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 23210 chr11 133520579 . aaaata aa 7.38 . INDEL;DP=2;AF1=0.505;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,17:2:0:0/1:20 | |
| 23211 chr11 133527348 . C T 13 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=49 PL:DP:SP:GT:GQ 44,6,0:2:0:1/1:49 | |
| 23212 chr11 133533244 . G A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 23213 chr11 133549479 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23214 chr11 133557896 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23215 chr11 133571184 . T G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 23216 chr11 133573249 . T G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 23217 chr11 133611654 . T G 5.29 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=50 PL:DP:SP:GT:GQ 35,6,0:2:0:1/1:49 | |
| 23218 chr11 133624988 . T C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 23219 chr11 133624990 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 23220 chr11 133639808 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 23221 chr11 133655010 . A T 3.55 . DP=2;AF1=0.5023;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 31,0,20:2:0:0/1:23 | |
| 23222 chr11 133665739 . TAAAAGAAA TAAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23223 chr11 133671874 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 23224 chr11 133675751 . A G 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 23225 chr11 133693891 . A C 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 23226 chr11 133695336 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23227 chr11 133699434 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 23228 chr11 133712180 . C T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 23229 chr11 133714076 . TG TGCG 3.25 . INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=3,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 38,0,86:4:0:0/1:41 | |
| 23230 chr11 133721189 . G C 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 23231 chr11 133730686 . T C 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=40 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 23232 chr11 133735327 . T A 3.01 . DP=9;AF1=0.4997;CI95=0.5,0.5;DP4=1,3,0,5;MQ=31;PV4=0.44,0.18,0.0034,1 PL:DP:SP:GT:GQ 30,0,74:9:0:0/1:33 | |
| 23233 chr11 133735479 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23234 chr11 133762358 . A T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 23235 chr11 133771677 . T G 3.25 . DP=2;AF1=0.8276;CI95=0.5,1;DP4=0,1,0,1;MQ=31;PV4=1,1,1,1 PL:DP:SP:GT:GQ 29,0,1:2:0:1/1:5 | |
| 23236 chr11 133771795 . C T 4.13 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 23237 chr11 133779318 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23238 chr11 133797604 . T A 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=35 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 23239 chr11 133797852 . AG ATGTG 7.35 . INDEL;DP=3;AF1=0.5001;CI95=0.5,0.5;DP4=1,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,34:2:0:0/1:37 | |
| 23240 chr11 133818007 . C A 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 23241 chr11 133843423 . GA GAGAAA 7.35 . INDEL;DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,44:2:0:0/1:44 | |
| 23242 chr11 133843518 . C G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 23243 chr11 133852953 . A G 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,1,0;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 23244 chr11 133857478 . T C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23245 chr11 133905896 . A T 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 23246 chr11 133911763 . A C 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 23247 chr11 133920869 . C A 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23248 chr11 133923814 . G C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23249 chr11 133946583 . C T 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 23250 chr11 133947605 . C T 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 23251 chr11 133952482 . c cAT 9.94 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 47,3,0:1:0:1/1:41 | |
| 23252 chr11 133954863 . aggtgg ag 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23253 chr11 133955053 . gttat gt 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23254 chr11 133957018 . T C 13.9 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=47 PL:DP:SP:GT:GQ 45,6,0:2:0:1/1:49 | |
| 23255 chr11 133981405 . G A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 23256 chr11 133982820 . A C 25 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,1;MQ=48 PL:DP:SP:GT:GQ 57,9,0:3:0:1/1:63 | |
| 23257 chr11 133993892 . G A 3.02 . DP=5;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23258 chr11 133998193 . GTAT GTATGTGGCTAT 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23259 chr11 134002883 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 23260 chr11 134010647 . T G 10.4 . DP=9;AF1=0.5001;CI95=0.5,0.5;DP4=1,0,0,3;MQ=49;PV4=0.25,0.011,0.33,0.21 PL:DP:SP:GT:GQ 40,0,35:4:0:0/1:37 | |
| 23261 chr11 134010722 . A G 32 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=47 PL:DP:SP:GT:GQ 64,9,0:3:0:1/1:63 | |
| 23262 chr11 134014673 . C CCT 99 . INDEL;DP=9;AF1=1;CI95=1,1;DP4=0,0,8,0;MQ=49 PL:DP:SP:GT:GQ 161,24,0:8:0:1/1:96 | |
| 23263 chr11 134014726 . T C 78 . DP=27;AF1=0.5;CI95=0.5,0.5;DP4=6,8,6,4;MQ=49;PV4=0.68,3.6e-11,0.0012,0.36 PL:DP:SP:GT:GQ 108,0,255:24:2:0/1:99 | |
| 23264 chr11 134016519 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=38 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 23265 chr11 134018656 . T C 99 . DP=36;AF1=1;CI95=1,1;DP4=0,0,19,12;MQ=48 PL:DP:SP:GT:GQ 251,93,0:31:0:1/1:99 | |
| 23266 chr11 134018745 . G A 4.77 . DP=30;AF1=0.4999;CI95=0.5,0.5;DP4=0,21,0,7;MQ=50;PV4=1,1.4e-08,0.053,0.2 PL:DP:SP:GT:GQ 33,0,239:28:0:0/1:36 | |
| 23267 chr11 134018820 . AGCTCC A 3.25 . INDEL;DP=6;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,1;MQ=50;PV4=1,0.26,1,1 PL:DP:SP:GT:GQ 38,0,114:4:0:0/1:41 | |
| 23268 chr11 134025568 . G A 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 23269 chr11 134029637 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 23270 chr11 134031836 . CA CAAA 7.36 . INDEL;DP=2;AF1=0.5012;CI95=0.5,0.5;DP4=0,1,0,1;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,23:2:0:0/1:26 | |
| 23271 chr11 134038538 . C T 99 . DP=11;AF1=1;CI95=1,1;DP4=0,0,2,8;MQ=46 PL:DP:SP:GT:GQ 180,30,0:10:0:1/1:99 | |
| 23272 chr11 134039869 . G C 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 23273 chr11 134047243 . T C 84 . DP=62;AF1=1;CI95=1,1;DP4=0,0,5,3;MQ=49 PL:DP:SP:GT:GQ 117,24,0:8:0:1/1:96 | |
| 23274 chr11 134074099 . T C 68 . DP=28;AF1=0.5;CI95=0.5,0.5;DP4=1,16,0,9;MQ=49;PV4=1,3e-13,0.0002,1 PL:DP:SP:GT:GQ 98,0,255:26:0:0/1:99 | |
| 23275 chr11 134101863 . T C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 23276 chr11 134106903 . C CTAT 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23277 chr11 134118822 . CGT CGTGT 4.42 . INDEL;DP=38;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 40,0,58:3:0:0/1:43 | |
| 23278 chr11 134126374 . CT CTGTT 7.42 . INDEL;DP=3;AF1=0.5101;CI95=0.5,0.5;DP4=1,0,1,0;MQ=49;PV4=1,1,1,1 PL:DP:SP:GT:GQ 44,0,14:2:0:0/1:17 | |
| 23279 chr11 134126812 . T TCC 4.42 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 | |
| 23280 chr11 134142903 . G T 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=33 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 23281 chr11 134181240 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 23282 chr11 134196220 . TG TGCTCTTAAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23283 chr11 134219833 . c cG 3.25 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 23284 chr11 134221932 . A C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 23285 chr11 134225366 . C G 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 23286 chr11 134226278 . C T 87 . DP=26;AF1=0.5;CI95=0.5,0.5;DP4=3,10,1,9;MQ=49;PV4=0.6,8e-05,0.0036,1 PL:DP:SP:GT:GQ 117,0,255:23:2:0/1:99 | |
| 23287 chr11 134240949 . T C 99 . DP=28;AF1=0.5;CI95=0.5,0.5;DP4=10,4,6,3;MQ=47;PV4=1,0.36,0,0.44 PL:DP:SP:GT:GQ 222,0,255:23:0:0/1:99 | |
| 23288 chr11 134250840 . C T 13 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 44,6,0:2:0:1/1:49 | |
| 23289 chr11 134255325 . T C 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 23290 chr11 134257135 . G T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 23291 chr11 134259092 . G C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=40 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 23292 chr11 134300139 . A T 3.01 . DP=2;AF1=0.4998;CI95=0.5,0.5;DP4=1,0,0,1;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 30,0,43:2:0:0/1:33 | |
| 23293 chr11 134322005 . G GGA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23294 chr11 134334728 . G T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 23295 chr11 134338761 . C G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23296 chr11 134344529 . A T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 23297 chr11 134347413 . C G 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 23298 chr11 134354089 . GCCA GCCATACCCCCA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23299 chr11 134356829 . C T 7.8 . DP=2;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,1;MQ=47;PV4=1,1,1,1 PL:DP:SP:GT:GQ 37,0,44:2:0:0/1:39 | |
| 23300 chr11 134374875 . T A 6.98 . DP=2;AF1=0.4999;CI95=0.5,0.5;DP4=0,1,1,0;MQ=46;PV4=1,1,1,1 PL:DP:SP:GT:GQ 36,0,44:2:0:0/1:38 | |
| 23301 chr11 134383116 . TG TGAGGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23302 chr11 134408009 . T A 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 23303 chr11 134490060 . G C 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 23304 chr11 134500132 . A C 9.53 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 23305 chr11 134500152 . a aGCAGTTGTC 12.7 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23306 chr11 134516026 . C T 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 23307 chr11 134531508 . a aGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23308 chr11 134539679 . A T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 23309 chr11 134548299 . A T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23310 chr11 134562569 . taaac tAAACaaac 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23311 chr11 134583743 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 23312 chr11 134584491 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 23313 chr11 134599423 . T C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 23314 chr11 134607019 . CCACA CCACACA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23315 chr11 134610525 . T A 6.98 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 36,3,0:1:0:1/1:41 | |
| 23316 chr11 134620759 . GG GGCTGGCGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23317 chr11 134622617 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 23318 chr11 134642721 . C T 6.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=36 PL:DP:SP:GT:GQ 35,3,0:1:0:1/1:41 | |
| 23319 chr11 134666124 . T G 8.65 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 | |
| 23320 chr11 134671714 . ag aGTTAGACCCg 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23321 chr11 134675175 . a aAGAG 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23322 chr11 134690023 . A G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23323 chr11 134692180 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 23324 chr11 134705583 . GGA G 5.8 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 23325 chr11 134706680 . C T 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 23326 chr11 134708801 . T C 9.31 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 | |
| 23327 chr11 134746808 . T TCATA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23328 chr11 134750963 . A T 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=38 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 23329 chr11 134760661 . A T 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 | |
| 23330 chr11 134783239 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23331 chr11 134784400 . A G 29.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=45 PL:DP:SP:GT:GQ 61,6,0:2:0:1/1:49 | |
| 23332 chr11 134787072 . GTGTGCCTGCAAT GT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23333 chr11 134801723 . T C 3.55 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 23334 chr11 134801980 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23335 chr11 134813592 . G A 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 23336 chr11 134814240 . A C 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 | |
| 23337 chr11 134846155 . C G 5.46 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 34,3,0:1:0:1/1:41 | |
| 23338 chr11 134864671 . T G 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23339 chr11 134874590 . A ACTCT 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23340 chr11 134876488 . T G 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=41 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 | |
| 23341 chr11 134907724 . A G 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 23342 chr11 134908786 . G A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 23343 chr11 134926754 . G A 12 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=49 PL:DP:SP:GT:GQ 43,6,0:2:0:1/1:49 | |
| 23344 chr11 134927553 . C T 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=45 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23345 chr11 134934866 . G T 12.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42 PL:DP:SP:GT:GQ 42,3,0:1:0:1/1:41 | |
| 23346 chr11 134936762 . CA CAGAA 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23347 chr11 134944712 . T A 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=39 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 | |
| 23348 chr11 134945978 . A G 14.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 44,3,0:1:0:1/1:41 | |
| 23349 chr11_gl000202_random 7324 . T C 4.77 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=60 PL:DP:SP:GT:GQ 33,3,0:1:0:1/1:41 | |
| 23350 chr11_gl000202_random 14487 . gc gCAc 6.56 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 | |
| 23351 chr11_gl000202_random 15232 . T A 3.55 . DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=44 PL:DP:SP:GT:GQ 31,3,0:1:0:1/1:41 | |
| 23352 chr11_gl000202_random 17710 . TC TCGCGCCTGC 12.7 . INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 | |
| 23353 chr11_gl000202_random 18805 . A C 3.02 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 30,3,0:1:0:1/1:41 | |
| 23354 chr11_gl000202_random 24919 . A G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=41 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 |