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changeset 6:e37d8a076d91 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit a972815cbd43dea553b3c0e4ad548f35d0023228-dirty
author iuc
date Sun, 28 Jul 2019 14:50:47 -0400
parents fd4f3d13e501
children 896a72e79738
files samtools_stats.xml
diffstat 1 files changed, 2 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- a/samtools_stats.xml	Fri Jan 04 17:03:19 2019 -0500
+++ b/samtools_stats.xml	Sun Jul 28 14:50:47 2019 -0400
@@ -10,6 +10,7 @@
     <expand macro="stdio"/>
     <expand macro="version_command"/>
     <command><![CDATA[
+        @ADDTHREADS@
         @PREPARE_IDX@
         @PREPARE_FASTA_IDX@
         samtools stats
@@ -65,6 +66,7 @@
             #if str($cov_threshold):
                 -g $cov_threshold
             #end if
+            -@ \$addthreads 
             infile
             @REGIONS_MANUAL@
             > '$output'