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comparison macros.xml @ 5:7b6dcfbdc6a9 draft

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planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/samtools/samtools_flagstat commit de7140295cce07e1bc1697e51dab4271c8d7a8a6
author devteam
date Fri, 18 Dec 2015 19:44:33 -0500
parents 10b658bef71a
children 28eb6a47be96
comparison
equal deleted inserted replaced
4:10b658bef71a 5:7b6dcfbdc6a9
39 url = {https://github.com/samtools/samtools},} 39 url = {https://github.com/samtools/samtools},}
40 </citation> 40 </citation>
41 </citations> 41 </citations>
42 </xml> 42 </xml>
43 <xml name="version_command"> 43 <xml name="version_command">
44 <version_command>samtools --version | head -n 1 | awk '{ print $2 }'</version_command> 44 <version_command>echo $(samtools --version | head -n 1)", "$(samtools --version | grep -o -E "htslib.*?")</version_command>
45 </xml> 45 </xml>
46 <xml name="stdio"> 46 <xml name="stdio">
47 <stdio> 47 <stdio>
48 <exit_code range="1:" level="fatal" description="Error" /> 48 <exit_code range="1:" level="fatal" description="Error" />
49 </stdio> 49 </stdio>