Mercurial > repos > devteam > sam_to_bam

changeset 6:a832dc88e7dc draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/sam_to_bam commit e2a10eeee8765ba6cf03847562e56cdaeaf4ba5c"
author iuc
date Thu, 05 Sep 2019 19:30:35 -0400
parents d6181de75bdd
children 428d5c102c96
files sam_to_bam.xml
diffstat 1 files changed, 1 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/sam_to_bam.xml	Sun Jul 28 14:45:59 2019 -0400
+++ b/sam_to_bam.xml	Thu Sep 05 19:30:35 2019 -0400
@@ -26,7 +26,7 @@
             -O bam
             -@ \${GALAXY_SLOTS:-1}
             -o '$output1'
-            -T temp
+            -T "\${TMPDIR:-.}"
     ]]></command>
 
     <inputs>