Mercurial > repos > devteam > sam_merge
diff test-data/sam_merge_out1.log @ 0:2a36d975b360 draft
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| author | devteam |
|---|---|
| date | Tue, 20 Aug 2013 11:57:35 -0400 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/sam_merge_out1.log Tue Aug 20 11:57:35 2013 -0400 @@ -0,0 +1,5 @@ +[Thu Aug 04 13:48:49 EST 2011] net.sf.picard.sam.MergeSamFiles INPUT=[/data/tmp/tmpjnE9mC/database/files/000/dataset_1.dat, /data/tmp/tmpjnE9mC/database/files/000/dataset_2.dat, /data/tmp/tmpjnE9mC/database/files/000/dataset_2.dat] OUTPUT=/data/tmp/tmpjnE9mC/database/files/000/dataset_3.dat MERGE_SEQUENCE_DICTIONARIES=true VALIDATION_STRINGENCY=LENIENT SORT_ORDER=coordinate ASSUME_SORTED=false USE_THREADING=false TMP_DIR=/tmp/rlazarus VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false +INFO 2011-08-04 13:48:49 MergeSamFiles Sorting input files using temp directory /tmp/rlazarus +INFO 2011-08-04 13:48:49 MergeSamFiles Finished reading inputs. +[Thu Aug 04 13:48:49 EST 2011] net.sf.picard.sam.MergeSamFiles done. +Runtime.totalMemory()=2028732416