Mercurial > repos > devteam > sam_merge
comparison test-data/sam_merge_out2.log @ 1:b874baf48b95 draft default tip
planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
author | devteam |
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date | Tue, 13 Oct 2015 12:30:21 -0400 |
parents | 2a36d975b360 |
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0:2a36d975b360 | 1:b874baf48b95 |
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1 [Thu Aug 04 13:49:53 EST 2011] net.sf.picard.sam.MergeSamFiles INPUT=[/data/tmp/tmpjnE9mC/database/files/000/dataset_5.dat, /data/tmp/tmpjnE9mC/database/files/000/dataset_6.dat, /data/tmp/tmpjnE9mC/database/files/000/dataset_7.dat] OUTPUT=/data/tmp/tmpjnE9mC/database/files/000/dataset_8.dat MERGE_SEQUENCE_DICTIONARIES=true VALIDATION_STRINGENCY=LENIENT SORT_ORDER=coordinate ASSUME_SORTED=false USE_THREADING=false TMP_DIR=/tmp/rlazarus VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false | |
2 INFO 2011-08-04 13:49:54 MergeSamFiles Sorting input files using temp directory /tmp/rlazarus | |
3 INFO 2011-08-04 13:49:54 MergeSamFiles Finished reading inputs. | |
4 [Thu Aug 04 13:49:54 EST 2011] net.sf.picard.sam.MergeSamFiles done. | |
5 Runtime.totalMemory()=2028732416 |