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comparison pileup_interval.xml @ 2:1e897622570e draft

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planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
author devteam
date Tue, 13 Oct 2015 12:28:06 -0400
parents 36826b2b4096
children d78f28cae91b
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1:36826b2b4096 2:1e897622570e
1 <tool id="pileup_interval" name="Pileup-to-Interval" version="1.0.1"> 1 <tool id="pileup_interval" name="Pileup-to-Interval" version="1.0.2">
2 <description>condenses pileup format into ranges of bases</description> 2 <description>condenses pileup format into ranges of bases</description>
3 <requirements>
4 <requirement type="package" version="0.1.19">samtools</requirement>
5 </requirements>
6 <command interpreter="python"> 3 <command interpreter="python">
7 pileup_interval.py 4 pileup_interval.py
8 --input=$input 5 --input=$input
9 --output=$output 6 --output=$output
10 --coverage=$coverage 7 --coverage=$coverage
183 3 Ending position (1-based) 180 3 Ending position (1-based)
184 4 Sequence of bases 181 4 Sequence of bases
185 182
186 </help> 183 </help>
187 </tool> 184 </tool>
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