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annotate mergesam_wrapper.sh @ 143:b2ca2d181fb4 draft

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fixed downsample sam in picard1106 (accept bam)
author Rayan Chikhi <chikhi@psu.edu>
date Mon, 16 Jun 2014 17:38:15 -0400
parents 37908b77f5bf
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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7
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1 #!/bin/bash
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2 eval java -Xmx2G -jar $JAVA_JAR_PATH/MergeSamFiles.jar O=$1.$2 ${*:3}
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3 mv $1.$2 $1